HEADER OXIDOREDUCTASE 01-SEP-17 6AUS TITLE STRUCTURE OF RAT NEURONAL NITRIC OXIDE SYNTHASE HEME DOMAIN IN COMPLEX TITLE 2 WITH 3-(2-(6-AMINO-4-METHYLPYRIDIN-2-YL)ETHYL)-5-(3-(METHYLAMINO) TITLE 3 PROPYL)BENZONITRILE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NITRIC OXIDE SYNTHASE, BRAIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 297-718; COMPND 5 SYNONYM: BNOS,CONSTITUTIVE NOS,NC-NOS,NOS TYPE I,NEURONAL NOS,NNOS, COMPND 6 PEPTIDYL-CYSTEINE S-NITROSYLASE NOS1; COMPND 7 EC: 1.14.13.39; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES; COMPND 10 OTHER_DETAILS: RESIDUES 339 TO 349 ARE DISORDERED. THE N-TERMINAL COMPND 11 RESIDUES 297 AND 298 AS WELL AS C-TERMINAL RESIDUES 717 AND 718 ARE COMPND 12 NOT OBSERVED IN DENSITY SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 ORGAN: BRAIN; SOURCE 6 GENE: NOS1, BNOS; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PCWORI KEYWDS NITRIC OXIDE SYNTHASE INHIBITOR COMPLEX HEME ENZYME, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR H.LI,T.L.POULOS REVDAT 4 13-MAR-24 6AUS 1 LINK REVDAT 3 25-DEC-19 6AUS 1 REMARK REVDAT 2 20-FEB-19 6AUS 1 REMARK REVDAT 1 11-JUL-18 6AUS 0 JRNL AUTH H.T.DO,H.Y.WANG,H.LI,G.CHREIFI,T.L.POULOS,R.B.SILVERMAN JRNL TITL IMPROVEMENT OF CELL PERMEABILITY OF HUMAN NEURONAL NITRIC JRNL TITL 2 OXIDE SYNTHASE INHIBITORS USING POTENT AND SELECTIVE JRNL TITL 3 2-AMINOPYRIDINE-BASED SCAFFOLDS WITH A FLUOROBENZENE LINKER. JRNL REF J. MED. CHEM. V. 60 9360 2017 JRNL REFN ISSN 1520-4804 JRNL PMID 29091437 JRNL DOI 10.1021/ACS.JMEDCHEM.7B01356 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.42 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.070 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 104038 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 5211 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 52.4447 - 5.2806 0.98 6245 310 0.1693 0.1705 REMARK 3 2 5.2806 - 4.1919 1.00 6292 381 0.1353 0.1488 REMARK 3 3 4.1919 - 3.6622 1.00 6288 333 0.1354 0.1795 REMARK 3 4 3.6622 - 3.3274 1.00 6392 332 0.1572 0.1856 REMARK 3 5 3.3274 - 3.0889 1.00 6294 320 0.1767 0.2250 REMARK 3 6 3.0889 - 2.9068 1.00 6264 364 0.1857 0.2466 REMARK 3 7 2.9068 - 2.7613 1.00 6334 340 0.1834 0.2282 REMARK 3 8 2.7613 - 2.6411 1.00 6344 316 0.1841 0.2142 REMARK 3 9 2.6411 - 2.5394 1.00 6318 322 0.1822 0.2291 REMARK 3 10 2.5394 - 2.4518 1.00 6298 317 0.1914 0.2468 REMARK 3 11 2.4518 - 2.3751 1.00 6363 318 0.1906 0.2347 REMARK 3 12 2.3751 - 2.3072 1.00 6374 325 0.1861 0.2258 REMARK 3 13 2.3072 - 2.2465 1.00 6198 393 0.2009 0.2462 REMARK 3 14 2.2465 - 2.1917 1.00 6369 337 0.2082 0.2714 REMARK 3 15 2.1917 - 2.1418 1.00 6343 301 0.2121 0.2851 REMARK 3 16 2.1418 - 2.0963 1.00 6438 267 0.2103 0.2875 REMARK 3 17 2.0963 - 2.0543 1.00 6308 331 0.2243 0.2507 REMARK 3 18 2.0543 - 2.0156 1.00 6306 348 0.2284 0.2523 REMARK 3 19 2.0156 - 1.9796 1.00 6312 291 0.2486 0.3029 REMARK 3 20 1.9796 - 1.9460 1.00 6331 371 0.2578 0.3102 REMARK 3 21 1.9460 - 1.9146 1.00 6235 340 0.2780 0.3326 REMARK 3 22 1.9146 - 1.8852 1.00 6412 319 0.3001 0.3161 REMARK 3 23 1.8852 - 1.8574 1.00 6338 301 0.3224 0.4206 REMARK 3 24 1.8574 - 1.8313 1.00 6296 347 0.3325 0.3966 REMARK 3 25 1.8313 - 1.8065 1.00 6318 362 0.3176 0.3879 REMARK 3 26 1.8065 - 1.7831 1.00 6221 353 0.3455 0.3483 REMARK 3 27 1.7831 - 1.7608 1.00 6345 368 0.3618 0.4110 REMARK 3 28 1.7608 - 1.7395 1.00 6320 324 0.3578 0.3298 REMARK 3 29 1.7395 - 1.7193 1.00 6213 344 0.3761 0.3926 REMARK 3 30 1.7193 - 1.7000 1.00 6366 344 0.3989 0.4136 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.900 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 7082 REMARK 3 ANGLE : 1.167 9637 REMARK 3 CHIRALITY : 0.074 996 REMARK 3 PLANARITY : 0.005 1217 REMARK 3 DIHEDRAL : 15.219 2580 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 299:716) REMARK 3 ORIGIN FOR THE GROUP (A): 11.3123 4.8614 22.4349 REMARK 3 T TENSOR REMARK 3 T11: 0.1718 T22: 0.1994 REMARK 3 T33: 0.2090 T12: -0.0260 REMARK 3 T13: 0.0155 T23: -0.0193 REMARK 3 L TENSOR REMARK 3 L11: 0.7915 L22: 1.3696 REMARK 3 L33: 6.1703 L12: -0.1519 REMARK 3 L13: -0.4545 L23: -0.3794 REMARK 3 S TENSOR REMARK 3 S11: -0.0822 S12: 0.1244 S13: -0.0267 REMARK 3 S21: 0.0389 S22: -0.0417 S23: 0.0615 REMARK 3 S31: 0.1695 S32: -0.3844 S33: 0.0642 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN B AND RESID 299:718) REMARK 3 ORIGIN FOR THE GROUP (A): 12.1351 4.8167 59.7640 REMARK 3 T TENSOR REMARK 3 T11: 0.1415 T22: 0.1535 REMARK 3 T33: 0.1951 T12: 0.0318 REMARK 3 T13: 0.0313 T23: 0.0158 REMARK 3 L TENSOR REMARK 3 L11: 0.7794 L22: 1.2507 REMARK 3 L33: 3.1439 L12: -0.1406 REMARK 3 L13: -0.0740 L23: 0.3453 REMARK 3 S TENSOR REMARK 3 S11: -0.0175 S12: 0.0048 S13: 0.0415 REMARK 3 S21: -0.1381 S22: -0.0589 S23: -0.0203 REMARK 3 S31: 0.1137 S32: 0.0854 S33: 0.0466 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6AUS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-SEP-17. REMARK 100 THE DEPOSITION ID IS D_1000223133. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM 7.1.0 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.3.11 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 104363 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 53.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.07100 REMARK 200 R SYM (I) : 0.07100 REMARK 200 FOR THE DATA SET : 4.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 2.15900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: REFMAC 5.8.0049 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: BRICK REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20-24% PEG3350, 0.1M MES 0.14-0.20M REMARK 280 AMMONIUM ACETATE, 10% ETHYLENE GLYCOL, 30UM SDS, 5 MM GSH, PH REMARK 280 5.8, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.84500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 82.09000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.31500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 82.09000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.84500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 55.31500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -87.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 CYS A 297 REMARK 465 PRO A 298 REMARK 465 SER A 339 REMARK 465 GLN A 340 REMARK 465 HIS A 341 REMARK 465 THR A 342 REMARK 465 ARG A 343 REMARK 465 LYS A 344 REMARK 465 PRO A 345 REMARK 465 GLU A 346 REMARK 465 ASP A 347 REMARK 465 VAL A 348 REMARK 465 ARG A 349 REMARK 465 LYS A 717 REMARK 465 GLY A 718 REMARK 465 CYS B 297 REMARK 465 PRO B 298 REMARK 465 SER B 339 REMARK 465 GLN B 340 REMARK 465 HIS B 341 REMARK 465 THR B 342 REMARK 465 ARG B 343 REMARK 465 LYS B 344 REMARK 465 PRO B 345 REMARK 465 GLU B 346 REMARK 465 ASP B 347 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 706 O1D HEM A 801 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 321 -34.13 -143.05 REMARK 500 SER A 392 -2.82 73.60 REMARK 500 LYS A 423 74.23 -110.48 REMARK 500 THR A 466 -78.09 -106.01 REMARK 500 ARG A 514 57.14 19.18 REMARK 500 PHE A 517 52.89 -141.11 REMARK 500 CYS A 582 60.68 -150.82 REMARK 500 ARG A 603 -132.87 -113.88 REMARK 500 THR B 321 -57.35 -125.50 REMARK 500 THR B 466 -84.84 -114.99 REMARK 500 ARG B 603 -134.36 -119.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 805 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 326 SG REMARK 620 2 CYS A 331 SG 116.1 REMARK 620 3 CYS B 326 SG 120.0 103.6 REMARK 620 4 CYS B 331 SG 100.9 98.9 115.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 801 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 415 SG REMARK 620 2 HEM A 801 NA 101.8 REMARK 620 3 HEM A 801 NB 101.7 86.2 REMARK 620 4 HEM A 801 NC 99.2 158.9 88.3 REMARK 620 5 HEM A 801 ND 101.5 88.3 156.8 88.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 802 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 415 SG REMARK 620 2 HEM B 802 NA 101.8 REMARK 620 3 HEM B 802 NB 102.1 86.0 REMARK 620 4 HEM B 802 NC 99.1 159.1 89.1 REMARK 620 5 HEM B 802 ND 100.8 88.6 157.1 88.1 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue H4B A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BYV A 804 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 805 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BYV B 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM B 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue H4B B 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 804 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6AUR RELATED DB: PDB REMARK 900 RELATED ID: 6AUT RELATED DB: PDB REMARK 900 RELATED ID: 6AUQ RELATED DB: PDB REMARK 900 RELATED ID: 6AUZ RELATED DB: PDB REMARK 900 RELATED ID: 6AV1 RELATED DB: PDB REMARK 900 RELATED ID: 6AUY RELATED DB: PDB REMARK 900 RELATED ID: 6AV0 RELATED DB: PDB REMARK 900 RELATED ID: 6AV2 RELATED DB: PDB REMARK 900 RELATED ID: 6AV6 RELATED DB: PDB REMARK 900 RELATED ID: 6AV7 RELATED DB: PDB REMARK 900 RELATED ID: 6AUU RELATED DB: PDB REMARK 900 RELATED ID: 6AUV RELATED DB: PDB REMARK 900 RELATED ID: 6AUW RELATED DB: PDB REMARK 900 RELATED ID: 6AUX RELATED DB: PDB REMARK 900 RELATED ID: 6AV3 RELATED DB: PDB REMARK 900 RELATED ID: 6AV4 RELATED DB: PDB REMARK 900 RELATED ID: 6AV5 RELATED DB: PDB DBREF 6AUS A 297 718 UNP P29476 NOS1_RAT 297 718 DBREF 6AUS B 297 718 UNP P29476 NOS1_RAT 297 718 SEQRES 1 A 422 CYS PRO ARG PHE LEU LYS VAL LYS ASN TRP GLU THR ASP SEQRES 2 A 422 VAL VAL LEU THR ASP THR LEU HIS LEU LYS SER THR LEU SEQRES 3 A 422 GLU THR GLY CYS THR GLU HIS ILE CYS MET GLY SER ILE SEQRES 4 A 422 MET LEU PRO SER GLN HIS THR ARG LYS PRO GLU ASP VAL SEQRES 5 A 422 ARG THR LYS ASP GLN LEU PHE PRO LEU ALA LYS GLU PHE SEQRES 6 A 422 LEU ASP GLN TYR TYR SER SER ILE LYS ARG PHE GLY SER SEQRES 7 A 422 LYS ALA HIS MET ASP ARG LEU GLU GLU VAL ASN LYS GLU SEQRES 8 A 422 ILE GLU SER THR SER THR TYR GLN LEU LYS ASP THR GLU SEQRES 9 A 422 LEU ILE TYR GLY ALA LYS HIS ALA TRP ARG ASN ALA SER SEQRES 10 A 422 ARG CYS VAL GLY ARG ILE GLN TRP SER LYS LEU GLN VAL SEQRES 11 A 422 PHE ASP ALA ARG ASP CYS THR THR ALA HIS GLY MET PHE SEQRES 12 A 422 ASN TYR ILE CYS ASN HIS VAL LYS TYR ALA THR ASN LYS SEQRES 13 A 422 GLY ASN LEU ARG SER ALA ILE THR ILE PHE PRO GLN ARG SEQRES 14 A 422 THR ASP GLY LYS HIS ASP PHE ARG VAL TRP ASN SER GLN SEQRES 15 A 422 LEU ILE ARG TYR ALA GLY TYR LYS GLN PRO ASP GLY SER SEQRES 16 A 422 THR LEU GLY ASP PRO ALA ASN VAL GLN PHE THR GLU ILE SEQRES 17 A 422 CYS ILE GLN GLN GLY TRP LYS ALA PRO ARG GLY ARG PHE SEQRES 18 A 422 ASP VAL LEU PRO LEU LEU LEU GLN ALA ASN GLY ASN ASP SEQRES 19 A 422 PRO GLU LEU PHE GLN ILE PRO PRO GLU LEU VAL LEU GLU SEQRES 20 A 422 VAL PRO ILE ARG HIS PRO LYS PHE ASP TRP PHE LYS ASP SEQRES 21 A 422 LEU GLY LEU LYS TRP TYR GLY LEU PRO ALA VAL SER ASN SEQRES 22 A 422 MET LEU LEU GLU ILE GLY GLY LEU GLU PHE SER ALA CYS SEQRES 23 A 422 PRO PHE SER GLY TRP TYR MET GLY THR GLU ILE GLY VAL SEQRES 24 A 422 ARG ASP TYR CYS ASP ASN SER ARG TYR ASN ILE LEU GLU SEQRES 25 A 422 GLU VAL ALA LYS LYS MET ASP LEU ASP MET ARG LYS THR SEQRES 26 A 422 SER SER LEU TRP LYS ASP GLN ALA LEU VAL GLU ILE ASN SEQRES 27 A 422 ILE ALA VAL LEU TYR SER PHE GLN SER ASP LYS VAL THR SEQRES 28 A 422 ILE VAL ASP HIS HIS SER ALA THR GLU SER PHE ILE LYS SEQRES 29 A 422 HIS MET GLU ASN GLU TYR ARG CYS ARG GLY GLY CYS PRO SEQRES 30 A 422 ALA ASP TRP VAL TRP ILE VAL PRO PRO MET SER GLY SER SEQRES 31 A 422 ILE THR PRO VAL PHE HIS GLN GLU MET LEU ASN TYR ARG SEQRES 32 A 422 LEU THR PRO SER PHE GLU TYR GLN PRO ASP PRO TRP ASN SEQRES 33 A 422 THR HIS VAL TRP LYS GLY SEQRES 1 B 422 CYS PRO ARG PHE LEU LYS VAL LYS ASN TRP GLU THR ASP SEQRES 2 B 422 VAL VAL LEU THR ASP THR LEU HIS LEU LYS SER THR LEU SEQRES 3 B 422 GLU THR GLY CYS THR GLU HIS ILE CYS MET GLY SER ILE SEQRES 4 B 422 MET LEU PRO SER GLN HIS THR ARG LYS PRO GLU ASP VAL SEQRES 5 B 422 ARG THR LYS ASP GLN LEU PHE PRO LEU ALA LYS GLU PHE SEQRES 6 B 422 LEU ASP GLN TYR TYR SER SER ILE LYS ARG PHE GLY SER SEQRES 7 B 422 LYS ALA HIS MET ASP ARG LEU GLU GLU VAL ASN LYS GLU SEQRES 8 B 422 ILE GLU SER THR SER THR TYR GLN LEU LYS ASP THR GLU SEQRES 9 B 422 LEU ILE TYR GLY ALA LYS HIS ALA TRP ARG ASN ALA SER SEQRES 10 B 422 ARG CYS VAL GLY ARG ILE GLN TRP SER LYS LEU GLN VAL SEQRES 11 B 422 PHE ASP ALA ARG ASP CYS THR THR ALA HIS GLY MET PHE SEQRES 12 B 422 ASN TYR ILE CYS ASN HIS VAL LYS TYR ALA THR ASN LYS SEQRES 13 B 422 GLY ASN LEU ARG SER ALA ILE THR ILE PHE PRO GLN ARG SEQRES 14 B 422 THR ASP GLY LYS HIS ASP PHE ARG VAL TRP ASN SER GLN SEQRES 15 B 422 LEU ILE ARG TYR ALA GLY TYR LYS GLN PRO ASP GLY SER SEQRES 16 B 422 THR LEU GLY ASP PRO ALA ASN VAL GLN PHE THR GLU ILE SEQRES 17 B 422 CYS ILE GLN GLN GLY TRP LYS ALA PRO ARG GLY ARG PHE SEQRES 18 B 422 ASP VAL LEU PRO LEU LEU LEU GLN ALA ASN GLY ASN ASP SEQRES 19 B 422 PRO GLU LEU PHE GLN ILE PRO PRO GLU LEU VAL LEU GLU SEQRES 20 B 422 VAL PRO ILE ARG HIS PRO LYS PHE ASP TRP PHE LYS ASP SEQRES 21 B 422 LEU GLY LEU LYS TRP TYR GLY LEU PRO ALA VAL SER ASN SEQRES 22 B 422 MET LEU LEU GLU ILE GLY GLY LEU GLU PHE SER ALA CYS SEQRES 23 B 422 PRO PHE SER GLY TRP TYR MET GLY THR GLU ILE GLY VAL SEQRES 24 B 422 ARG ASP TYR CYS ASP ASN SER ARG TYR ASN ILE LEU GLU SEQRES 25 B 422 GLU VAL ALA LYS LYS MET ASP LEU ASP MET ARG LYS THR SEQRES 26 B 422 SER SER LEU TRP LYS ASP GLN ALA LEU VAL GLU ILE ASN SEQRES 27 B 422 ILE ALA VAL LEU TYR SER PHE GLN SER ASP LYS VAL THR SEQRES 28 B 422 ILE VAL ASP HIS HIS SER ALA THR GLU SER PHE ILE LYS SEQRES 29 B 422 HIS MET GLU ASN GLU TYR ARG CYS ARG GLY GLY CYS PRO SEQRES 30 B 422 ALA ASP TRP VAL TRP ILE VAL PRO PRO MET SER GLY SER SEQRES 31 B 422 ILE THR PRO VAL PHE HIS GLN GLU MET LEU ASN TYR ARG SEQRES 32 B 422 LEU THR PRO SER PHE GLU TYR GLN PRO ASP PRO TRP ASN SEQRES 33 B 422 THR HIS VAL TRP LYS GLY HET HEM A 801 43 HET H4B A 802 17 HET ACT A 803 4 HET BYV A 804 23 HET ZN A 805 1 HET BYV B 801 23 HET HEM B 802 43 HET H4B B 803 17 HET ACT B 804 4 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM H4B 5,6,7,8-TETRAHYDROBIOPTERIN HETNAM ACT ACETATE ION HETNAM BYV 3-[2-(6-AMINO-4-METHYLPYRIDIN-2-YL)ETHYL]-5-[3- HETNAM 2 BYV (METHYLAMINO)PROPYL]BENZONITRILE HETNAM ZN ZINC ION HETSYN HEM HEME FORMUL 3 HEM 2(C34 H32 FE N4 O4) FORMUL 4 H4B 2(C9 H15 N5 O3) FORMUL 5 ACT 2(C2 H3 O2 1-) FORMUL 6 BYV 2(C19 H24 N4) FORMUL 7 ZN ZN 2+ FORMUL 12 HOH *506(H2 O) HELIX 1 AA1 THR A 315 SER A 320 5 6 HELIX 2 AA2 LYS A 351 ILE A 369 1 19 HELIX 3 AA3 SER A 374 SER A 392 1 19 HELIX 4 AA4 LYS A 397 ASN A 411 1 15 HELIX 5 AA5 GLY A 417 TRP A 421 5 5 HELIX 6 AA6 THR A 434 ASN A 451 1 18 HELIX 7 AA7 LYS A 452 ASN A 454 5 3 HELIX 8 AA8 ASN A 498 GLN A 508 1 11 HELIX 9 AA9 PRO A 537 VAL A 541 5 5 HELIX 10 AB1 PHE A 551 GLY A 558 5 8 HELIX 11 AB2 GLY A 590 VAL A 595 1 6 HELIX 12 AB3 VAL A 595 ASP A 600 1 6 HELIX 13 AB4 ILE A 606 MET A 614 1 9 HELIX 14 AB5 LYS A 620 SER A 623 5 4 HELIX 15 AB6 LEU A 624 ASP A 644 1 21 HELIX 16 AB7 ASP A 650 GLY A 670 1 21 HELIX 17 AB8 ASP A 675 VAL A 680 1 6 HELIX 18 AB9 SER A 684 GLN A 693 5 10 HELIX 19 AC1 ASP A 709 HIS A 714 1 6 HELIX 20 AC2 THR B 315 SER B 320 5 6 HELIX 21 AC3 THR B 350 ILE B 369 1 20 HELIX 22 AC4 SER B 374 SER B 392 1 19 HELIX 23 AC5 LYS B 397 ASN B 411 1 15 HELIX 24 AC6 GLY B 417 TRP B 421 5 5 HELIX 25 AC7 THR B 434 ASN B 451 1 18 HELIX 26 AC8 LYS B 452 ASN B 454 5 3 HELIX 27 AC9 ASN B 498 GLN B 508 1 11 HELIX 28 AD1 PRO B 537 VAL B 541 5 5 HELIX 29 AD2 PHE B 551 GLY B 558 5 8 HELIX 30 AD3 GLY B 590 VAL B 595 1 6 HELIX 31 AD4 VAL B 595 ASP B 600 1 6 HELIX 32 AD5 ILE B 606 MET B 614 1 9 HELIX 33 AD6 LYS B 620 SER B 623 5 4 HELIX 34 AD7 LEU B 624 ASP B 644 1 21 HELIX 35 AD8 ASP B 650 GLY B 670 1 21 HELIX 36 AD9 ASP B 675 VAL B 680 1 6 HELIX 37 AE1 SER B 684 GLN B 693 5 10 HELIX 38 AE2 ASP B 709 HIS B 714 1 6 SHEET 1 AA1 2 LEU A 301 LYS A 304 0 SHEET 2 AA1 2 VAL A 311 ASP A 314 -1 O ASP A 314 N LEU A 301 SHEET 1 AA2 4 GLN A 425 ASP A 428 0 SHEET 2 AA2 4 ALA A 458 ILE A 461 1 O ILE A 459 N PHE A 427 SHEET 3 AA2 4 PHE A 584 SER A 585 -1 O SER A 585 N ALA A 458 SHEET 4 AA2 4 ALA A 566 VAL A 567 -1 N VAL A 567 O PHE A 584 SHEET 1 AA3 3 ARG A 473 VAL A 474 0 SHEET 2 AA3 3 LEU A 522 GLN A 525 -1 O GLN A 525 N ARG A 473 SHEET 3 AA3 3 GLU A 532 PHE A 534 -1 O PHE A 534 N LEU A 522 SHEET 1 AA4 2 GLY A 484 LYS A 486 0 SHEET 2 AA4 2 THR A 492 GLY A 494 -1 O LEU A 493 N TYR A 485 SHEET 1 AA5 2 GLU A 543 PRO A 545 0 SHEET 2 AA5 2 LYS A 560 TYR A 562 -1 O TRP A 561 N VAL A 544 SHEET 1 AA6 3 LEU A 577 PHE A 579 0 SHEET 2 AA6 3 LEU A 571 ILE A 574 -1 N LEU A 572 O PHE A 579 SHEET 3 AA6 3 SER A 703 GLU A 705 -1 O GLU A 705 N LEU A 571 SHEET 1 AA7 2 TYR A 588 MET A 589 0 SHEET 2 AA7 2 ILE A 648 VAL A 649 1 O VAL A 649 N TYR A 588 SHEET 1 AA8 2 LEU B 301 LYS B 304 0 SHEET 2 AA8 2 VAL B 311 ASP B 314 -1 O ASP B 314 N LEU B 301 SHEET 1 AA9 4 GLN B 425 ASP B 428 0 SHEET 2 AA9 4 ALA B 458 ILE B 461 1 O ILE B 459 N PHE B 427 SHEET 3 AA9 4 PHE B 584 SER B 585 -1 O SER B 585 N ALA B 458 SHEET 4 AA9 4 ALA B 566 VAL B 567 -1 N VAL B 567 O PHE B 584 SHEET 1 AB1 3 ARG B 473 VAL B 474 0 SHEET 2 AB1 3 LEU B 522 GLN B 525 -1 O GLN B 525 N ARG B 473 SHEET 3 AB1 3 GLU B 532 PHE B 534 -1 O PHE B 534 N LEU B 522 SHEET 1 AB2 2 GLY B 484 LYS B 486 0 SHEET 2 AB2 2 THR B 492 GLY B 494 -1 O LEU B 493 N TYR B 485 SHEET 1 AB3 2 GLU B 543 PRO B 545 0 SHEET 2 AB3 2 LYS B 560 TYR B 562 -1 O TRP B 561 N VAL B 544 SHEET 1 AB4 3 LEU B 577 PHE B 579 0 SHEET 2 AB4 3 LEU B 571 ILE B 574 -1 N LEU B 572 O PHE B 579 SHEET 3 AB4 3 SER B 703 GLU B 705 -1 O SER B 703 N GLU B 573 SHEET 1 AB5 2 TYR B 588 MET B 589 0 SHEET 2 AB5 2 ILE B 648 VAL B 649 1 O VAL B 649 N TYR B 588 LINK SG CYS A 326 ZN ZN A 805 1555 1555 2.36 LINK SG CYS A 331 ZN ZN A 805 1555 1555 2.34 LINK SG CYS A 415 FE HEM A 801 1555 1555 2.37 LINK ZN ZN A 805 SG CYS B 326 1555 1555 2.34 LINK ZN ZN A 805 SG CYS B 331 1555 1555 2.35 LINK SG CYS B 415 FE HEM B 802 1555 1555 2.38 CISPEP 1 THR A 701 PRO A 702 0 -2.63 CISPEP 2 THR A 701 PRO A 702 0 -2.25 CISPEP 3 THR B 701 PRO B 702 0 -3.72 SITE 1 AC1 19 TRP A 409 CYS A 415 SER A 457 PHE A 584 SITE 2 AC1 19 SER A 585 GLY A 586 TRP A 587 GLU A 592 SITE 3 AC1 19 TRP A 678 PHE A 704 TYR A 706 H4B A 802 SITE 4 AC1 19 ACT A 803 BYV A 804 HOH A 911 HOH A 925 SITE 5 AC1 19 HOH A 949 HOH A 956 HOH A 961 SITE 1 AC2 15 SER A 334 ARG A 596 VAL A 677 TRP A 678 SITE 2 AC2 15 HEM A 801 HOH A 961 HOH A 981 HOH A 990 SITE 3 AC2 15 HOH A1010 TRP B 676 PHE B 691 HIS B 692 SITE 4 AC2 15 GLN B 693 GLU B 694 HOH B1018 SITE 1 AC3 2 TRP A 587 HEM A 801 SITE 1 AC4 14 MET A 336 GLN A 478 ARG A 481 VAL A 567 SITE 2 AC4 14 PHE A 584 GLY A 586 TRP A 587 TYR A 588 SITE 3 AC4 14 GLU A 592 ASP A 597 ARG A 603 HEM A 801 SITE 4 AC4 14 HOH A 903 HOH A 909 SITE 1 AC5 4 CYS A 326 CYS A 331 CYS B 326 CYS B 331 SITE 1 AC6 14 MET B 336 GLN B 478 ARG B 481 GLY B 586 SITE 2 AC6 14 TRP B 587 GLU B 592 ASP B 597 ARG B 603 SITE 3 AC6 14 HEM B 802 HOH B 902 HOH B 907 HOH B 929 SITE 4 AC6 14 HOH B 974 HOH B 978 SITE 1 AC7 17 TRP B 409 CYS B 415 SER B 457 PHE B 584 SITE 2 AC7 17 SER B 585 TRP B 587 GLU B 592 TRP B 678 SITE 3 AC7 17 PHE B 704 TYR B 706 BYV B 801 H4B B 803 SITE 4 AC7 17 HOH B 929 HOH B 944 HOH B 959 HOH B 974 SITE 5 AC7 17 HOH B 978 SITE 1 AC8 15 TRP A 676 PHE A 691 HIS A 692 GLN A 693 SITE 2 AC8 15 GLU A 694 SER B 334 ARG B 596 VAL B 677 SITE 3 AC8 15 TRP B 678 HEM B 802 HOH B 929 HOH B 970 SITE 4 AC8 15 HOH B 995 HOH B1006 HOH B1047 SITE 1 AC9 4 TRP B 587 VAL B 649 HOH B 930 HOH B 945 CRYST1 51.690 110.630 164.180 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019346 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009039 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006091 0.00000