HEADER BIOSYNTHETIC PROTEIN 05-SEP-17 6AWL TITLE CRYSTAL STRUCTURE OF HUMAN COQ9 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UBIQUINONE BIOSYNTHESIS PROTEIN COQ9, MITOCHONDRIAL; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: COQ9, C16ORF49, HSPC326, PSEC0129; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TETR FAMILY, COENZYME Q BIOSYNTHESIS, LIPID BINDING, STRUCTURAL KEYWDS 2 GENOMICS, PSI-2, PROTEIN STRUCTURE INITIATIVE, MITOCHONDRIAL PROTEIN KEYWDS 3 PARTNERSHIP, MPP, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.A.BINGMAN,D.C.LOHMAN,R.W.SMITH,D.J.PAGLIARINI,MITOCHONDRIAL PROTEIN AUTHOR 2 PARTNERSHIP (MPP) REVDAT 5 04-OCT-23 6AWL 1 REMARK REVDAT 4 01-JAN-20 6AWL 1 REMARK REVDAT 3 06-MAR-19 6AWL 1 JRNL REVDAT 2 20-FEB-19 6AWL 1 REMARK REVDAT 1 06-FEB-19 6AWL 0 JRNL AUTH D.C.LOHMAN,D.AYDIN,H.C.VON BANK,R.W.SMITH,V.LINKE, JRNL AUTH 2 E.WEISENHORN,M.T.MCDEVITT,P.HUTCHINS,E.M.WILKERSON, JRNL AUTH 3 B.WANCEWICZ,J.RUSSELL,M.S.STEFELY,E.T.BEEBE,A.JOCHEM, JRNL AUTH 4 J.J.COON,C.A.BINGMAN,M.DAL PERARO,D.J.PAGLIARINI JRNL TITL AN ISOPRENE LIPID-BINDING PROTEIN PROMOTES EUKARYOTIC JRNL TITL 2 COENZYME Q BIOSYNTHESIS. JRNL REF MOL. CELL V. 73 763 2019 JRNL REFN ISSN 1097-4164 JRNL PMID 30661980 JRNL DOI 10.1016/J.MOLCEL.2018.11.033 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.69 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 31212 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.410 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.7094 - 4.8189 1.00 2121 146 0.1775 0.1973 REMARK 3 2 4.8189 - 3.8254 1.00 2108 144 0.1583 0.1982 REMARK 3 3 3.8254 - 3.3419 1.00 2095 143 0.1785 0.2388 REMARK 3 4 3.3419 - 3.0364 1.00 2094 143 0.1969 0.2822 REMARK 3 5 3.0364 - 2.8188 1.00 2095 144 0.2128 0.2442 REMARK 3 6 2.8188 - 2.6526 1.00 2078 143 0.2103 0.2719 REMARK 3 7 2.6526 - 2.5198 1.00 2069 141 0.2101 0.2545 REMARK 3 8 2.5198 - 2.4101 1.00 2098 144 0.2151 0.3020 REMARK 3 9 2.4101 - 2.3173 1.00 2092 142 0.2255 0.2852 REMARK 3 10 2.3173 - 2.2374 1.00 2055 142 0.2370 0.2754 REMARK 3 11 2.2374 - 2.1674 1.00 2096 143 0.2539 0.3014 REMARK 3 12 2.1674 - 2.1055 1.00 2052 141 0.2635 0.2822 REMARK 3 13 2.1055 - 2.0500 1.00 2098 143 0.2850 0.3384 REMARK 3 14 2.0500 - 2.0000 1.00 2061 141 0.3075 0.3055 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.650 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.31 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3433 REMARK 3 ANGLE : 0.661 4657 REMARK 3 CHIRALITY : 0.038 512 REMARK 3 PLANARITY : 0.004 600 REMARK 3 DIHEDRAL : 12.685 2064 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6AWL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-SEP-17. REMARK 100 THE DEPOSITION ID IS D_1000229937. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0332 REMARK 200 MONOCHROMATOR : SILICON 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31242 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 48.690 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.09055 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.3800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 1.35500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.250 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4RHP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 25.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN WAS DISSOLVED AT 4.89 MG/ML IN REMARK 280 A BUFFER CONTAINING 10 MM HEPES PH 7.5, 100 MM NACL, 0.3 MM REMARK 280 TCEP. 200 NL OF PROTEIN WAS MIXED WITH 200 NL OF RESERVOIR IN A REMARK 280 SD2 PLATE. THE RESERVOIR CONSISTED OF 21% W/V PEG 3350, 0.25 M REMARK 280 NACL, AND 0.1 M BISTRIS PH 6.5. CRYSTALS WERE CRYOPRESERVED IN REMARK 280 35% PEG 3350, 0.2 M NACL AND 0.1 M BISTRIS BUFFER, PH 6.5., REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 48.69500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 VAL A 6 REMARK 465 SER A 7 REMARK 465 GLY A 8 REMARK 465 ALA A 9 REMARK 465 LEU A 10 REMARK 465 GLY A 11 REMARK 465 ARG A 12 REMARK 465 ALA A 13 REMARK 465 GLY A 14 REMARK 465 TRP A 15 REMARK 465 ARG A 16 REMARK 465 LEU A 17 REMARK 465 LEU A 18 REMARK 465 GLN A 19 REMARK 465 LEU A 20 REMARK 465 ARG A 21 REMARK 465 CYS A 22 REMARK 465 LEU A 23 REMARK 465 PRO A 24 REMARK 465 VAL A 25 REMARK 465 ALA A 26 REMARK 465 ARG A 27 REMARK 465 CYS A 28 REMARK 465 ARG A 29 REMARK 465 GLN A 30 REMARK 465 ALA A 31 REMARK 465 LEU A 32 REMARK 465 VAL A 33 REMARK 465 PRO A 34 REMARK 465 ARG A 35 REMARK 465 ALA A 36 REMARK 465 PHE A 37 REMARK 465 HIS A 38 REMARK 465 ALA A 39 REMARK 465 SER A 40 REMARK 465 ALA A 41 REMARK 465 VAL A 42 REMARK 465 GLY A 43 REMARK 465 LEU A 44 REMARK 465 ARG A 45 REMARK 465 SER A 46 REMARK 465 SER A 47 REMARK 465 ASP A 48 REMARK 465 GLU A 49 REMARK 465 GLN A 50 REMARK 465 LYS A 51 REMARK 465 GLN A 52 REMARK 465 GLN A 53 REMARK 465 PRO A 54 REMARK 465 PRO A 55 REMARK 465 ASN A 56 REMARK 465 SER A 57 REMARK 465 PHE A 58 REMARK 465 SER A 59 REMARK 465 GLN A 60 REMARK 465 GLN A 61 REMARK 465 HIS A 62 REMARK 465 SER A 63 REMARK 465 GLU A 64 REMARK 465 THR A 65 REMARK 465 GLN A 66 REMARK 465 GLY A 67 REMARK 465 ALA A 68 REMARK 465 GLU A 69 REMARK 465 LYS A 70 REMARK 465 PRO A 71 REMARK 465 ASP A 72 REMARK 465 PRO A 73 REMARK 465 GLU A 74 REMARK 465 SER A 75 REMARK 465 SER A 76 REMARK 465 HIS A 77 REMARK 465 SER A 78 REMARK 465 PRO A 79 REMARK 465 PRO A 80 REMARK 465 ARG A 81 REMARK 465 TYR A 82 REMARK 465 THR A 83 REMARK 465 ASP A 84 REMARK 465 GLN A 85 REMARK 465 GLY A 86 REMARK 465 GLY A 87 REMARK 465 GLU A 88 REMARK 465 GLU A 89 REMARK 465 GLU A 90 REMARK 465 GLU A 91 REMARK 465 ASP A 92 REMARK 465 TYR A 93 REMARK 465 GLU A 94 REMARK 465 THR A 312 REMARK 465 GLY A 313 REMARK 465 LEU A 314 REMARK 465 ASN A 315 REMARK 465 GLN A 316 REMARK 465 ARG A 317 REMARK 465 ARG A 318 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 ALA B 3 REMARK 465 ALA B 4 REMARK 465 ALA B 5 REMARK 465 VAL B 6 REMARK 465 SER B 7 REMARK 465 GLY B 8 REMARK 465 ALA B 9 REMARK 465 LEU B 10 REMARK 465 GLY B 11 REMARK 465 ARG B 12 REMARK 465 ALA B 13 REMARK 465 GLY B 14 REMARK 465 TRP B 15 REMARK 465 ARG B 16 REMARK 465 LEU B 17 REMARK 465 LEU B 18 REMARK 465 GLN B 19 REMARK 465 LEU B 20 REMARK 465 ARG B 21 REMARK 465 CYS B 22 REMARK 465 LEU B 23 REMARK 465 PRO B 24 REMARK 465 VAL B 25 REMARK 465 ALA B 26 REMARK 465 ARG B 27 REMARK 465 CYS B 28 REMARK 465 ARG B 29 REMARK 465 GLN B 30 REMARK 465 ALA B 31 REMARK 465 LEU B 32 REMARK 465 VAL B 33 REMARK 465 PRO B 34 REMARK 465 ARG B 35 REMARK 465 ALA B 36 REMARK 465 PHE B 37 REMARK 465 HIS B 38 REMARK 465 ALA B 39 REMARK 465 SER B 40 REMARK 465 ALA B 41 REMARK 465 VAL B 42 REMARK 465 GLY B 43 REMARK 465 LEU B 44 REMARK 465 ARG B 45 REMARK 465 SER B 46 REMARK 465 SER B 47 REMARK 465 ASP B 48 REMARK 465 GLU B 49 REMARK 465 GLN B 50 REMARK 465 LYS B 51 REMARK 465 GLN B 52 REMARK 465 GLN B 53 REMARK 465 PRO B 54 REMARK 465 PRO B 55 REMARK 465 ASN B 56 REMARK 465 SER B 57 REMARK 465 PHE B 58 REMARK 465 SER B 59 REMARK 465 GLN B 60 REMARK 465 GLN B 61 REMARK 465 HIS B 62 REMARK 465 SER B 63 REMARK 465 GLU B 64 REMARK 465 THR B 65 REMARK 465 GLN B 66 REMARK 465 GLY B 67 REMARK 465 ALA B 68 REMARK 465 GLU B 69 REMARK 465 LYS B 70 REMARK 465 PRO B 71 REMARK 465 ASP B 72 REMARK 465 PRO B 73 REMARK 465 GLU B 74 REMARK 465 SER B 75 REMARK 465 SER B 76 REMARK 465 HIS B 77 REMARK 465 SER B 78 REMARK 465 PRO B 79 REMARK 465 PRO B 80 REMARK 465 ARG B 81 REMARK 465 TYR B 82 REMARK 465 THR B 83 REMARK 465 ASP B 84 REMARK 465 GLN B 85 REMARK 465 GLY B 86 REMARK 465 GLY B 87 REMARK 465 GLU B 88 REMARK 465 GLU B 89 REMARK 465 GLU B 90 REMARK 465 GLU B 91 REMARK 465 MET B 283 REMARK 465 GLY B 284 REMARK 465 HIS B 285 REMARK 465 THR B 286 REMARK 465 ALA B 287 REMARK 465 LYS B 288 REMARK 465 GLN B 289 REMARK 465 VAL B 290 REMARK 465 LYS B 291 REMARK 465 SER B 292 REMARK 465 THR B 293 REMARK 465 GLY B 294 REMARK 465 GLU B 295 REMARK 465 ALA B 296 REMARK 465 LEU B 297 REMARK 465 VAL B 298 REMARK 465 GLN B 299 REMARK 465 GLY B 300 REMARK 465 LEU B 301 REMARK 465 MET B 302 REMARK 465 GLY B 303 REMARK 465 ALA B 304 REMARK 465 ALA B 305 REMARK 465 VAL B 306 REMARK 465 THR B 307 REMARK 465 LEU B 308 REMARK 465 LYS B 309 REMARK 465 ASN B 310 REMARK 465 LEU B 311 REMARK 465 THR B 312 REMARK 465 GLY B 313 REMARK 465 LEU B 314 REMARK 465 ASN B 315 REMARK 465 GLN B 316 REMARK 465 ARG B 317 REMARK 465 ARG B 318 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP B 92 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD1 HIS A 114 OE2 GLU A 119 1.53 REMARK 500 OE1 GLU A 162 HH TYR A 230 1.58 REMARK 500 HH TYR B 241 O HOH B 405 1.59 REMARK 500 HE ARG B 202 O HOH B 409 1.60 REMARK 500 O VAL B 111 H GLY B 115 1.60 REMARK 500 O ALA B 118 O HOH B 401 2.13 REMARK 500 OE1 GLN B 152 O HOH B 402 2.13 REMARK 500 O PRO A 264 O HOH A 501 2.14 REMARK 500 OE1 GLU A 163 O HOH A 502 2.16 REMARK 500 OE1 GLU B 198 O HOH B 403 2.17 REMARK 500 O HOH B 474 O HOH B 478 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O SER A 235 HH11 ARG B 271 2444 1.60 REMARK 500 O SER A 235 NH1 ARG B 271 2444 2.06 REMARK 500 O HOH A 587 O HOH A 606 2454 2.15 REMARK 500 O HOH B 421 O HOH B 432 1655 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 135 -9.52 -59.67 REMARK 500 ASP A 233 -87.68 55.70 REMARK 500 GLN A 234 53.79 31.58 REMARK 500 SER A 235 -73.44 -144.20 REMARK 500 HIS A 285 65.65 -100.61 REMARK 500 SER B 235 149.49 85.80 REMARK 500 THR B 236 -125.41 -155.81 REMARK 500 ASP B 237 -21.17 82.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PEF A 401 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEF A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BTB A 402 DBREF 6AWL A 1 318 UNP O75208 COQ9_HUMAN 1 318 DBREF 6AWL B 1 318 UNP O75208 COQ9_HUMAN 1 318 SEQRES 1 A 318 MET ALA ALA ALA ALA VAL SER GLY ALA LEU GLY ARG ALA SEQRES 2 A 318 GLY TRP ARG LEU LEU GLN LEU ARG CYS LEU PRO VAL ALA SEQRES 3 A 318 ARG CYS ARG GLN ALA LEU VAL PRO ARG ALA PHE HIS ALA SEQRES 4 A 318 SER ALA VAL GLY LEU ARG SER SER ASP GLU GLN LYS GLN SEQRES 5 A 318 GLN PRO PRO ASN SER PHE SER GLN GLN HIS SER GLU THR SEQRES 6 A 318 GLN GLY ALA GLU LYS PRO ASP PRO GLU SER SER HIS SER SEQRES 7 A 318 PRO PRO ARG TYR THR ASP GLN GLY GLY GLU GLU GLU GLU SEQRES 8 A 318 ASP TYR GLU SER GLU GLU GLN LEU GLN HIS ARG ILE LEU SEQRES 9 A 318 THR ALA ALA LEU GLU PHE VAL PRO ALA HIS GLY TRP THR SEQRES 10 A 318 ALA GLU ALA ILE ALA GLU GLY ALA GLN SER LEU GLY LEU SEQRES 11 A 318 SER SER ALA ALA ALA SER MET PHE GLY LYS ASP GLY SER SEQRES 12 A 318 GLU LEU ILE LEU HIS PHE VAL THR GLN CYS ASN THR ARG SEQRES 13 A 318 LEU THR ARG VAL LEU GLU GLU GLU GLN LYS LEU VAL GLN SEQRES 14 A 318 LEU GLY GLN ALA GLU LYS ARG LYS THR ASP GLN PHE LEU SEQRES 15 A 318 ARG ASP ALA VAL GLU THR ARG LEU ARG MET LEU ILE PRO SEQRES 16 A 318 TYR ILE GLU HIS TRP PRO ARG ALA LEU SER ILE LEU MET SEQRES 17 A 318 LEU PRO HIS ASN ILE PRO SER SER LEU SER LEU LEU THR SEQRES 18 A 318 SER MET VAL ASP ASP MET TRP HIS TYR ALA GLY ASP GLN SEQRES 19 A 318 SER THR ASP PHE ASN TRP TYR THR ARG ARG ALA MET LEU SEQRES 20 A 318 ALA ALA ILE TYR ASN THR THR GLU LEU VAL MET MET GLN SEQRES 21 A 318 ASP SER SER PRO ASP PHE GLU ASP THR TRP ARG PHE LEU SEQRES 22 A 318 GLU ASN ARG VAL ASN ASP ALA MET ASN MET GLY HIS THR SEQRES 23 A 318 ALA LYS GLN VAL LYS SER THR GLY GLU ALA LEU VAL GLN SEQRES 24 A 318 GLY LEU MET GLY ALA ALA VAL THR LEU LYS ASN LEU THR SEQRES 25 A 318 GLY LEU ASN GLN ARG ARG SEQRES 1 B 318 MET ALA ALA ALA ALA VAL SER GLY ALA LEU GLY ARG ALA SEQRES 2 B 318 GLY TRP ARG LEU LEU GLN LEU ARG CYS LEU PRO VAL ALA SEQRES 3 B 318 ARG CYS ARG GLN ALA LEU VAL PRO ARG ALA PHE HIS ALA SEQRES 4 B 318 SER ALA VAL GLY LEU ARG SER SER ASP GLU GLN LYS GLN SEQRES 5 B 318 GLN PRO PRO ASN SER PHE SER GLN GLN HIS SER GLU THR SEQRES 6 B 318 GLN GLY ALA GLU LYS PRO ASP PRO GLU SER SER HIS SER SEQRES 7 B 318 PRO PRO ARG TYR THR ASP GLN GLY GLY GLU GLU GLU GLU SEQRES 8 B 318 ASP TYR GLU SER GLU GLU GLN LEU GLN HIS ARG ILE LEU SEQRES 9 B 318 THR ALA ALA LEU GLU PHE VAL PRO ALA HIS GLY TRP THR SEQRES 10 B 318 ALA GLU ALA ILE ALA GLU GLY ALA GLN SER LEU GLY LEU SEQRES 11 B 318 SER SER ALA ALA ALA SER MET PHE GLY LYS ASP GLY SER SEQRES 12 B 318 GLU LEU ILE LEU HIS PHE VAL THR GLN CYS ASN THR ARG SEQRES 13 B 318 LEU THR ARG VAL LEU GLU GLU GLU GLN LYS LEU VAL GLN SEQRES 14 B 318 LEU GLY GLN ALA GLU LYS ARG LYS THR ASP GLN PHE LEU SEQRES 15 B 318 ARG ASP ALA VAL GLU THR ARG LEU ARG MET LEU ILE PRO SEQRES 16 B 318 TYR ILE GLU HIS TRP PRO ARG ALA LEU SER ILE LEU MET SEQRES 17 B 318 LEU PRO HIS ASN ILE PRO SER SER LEU SER LEU LEU THR SEQRES 18 B 318 SER MET VAL ASP ASP MET TRP HIS TYR ALA GLY ASP GLN SEQRES 19 B 318 SER THR ASP PHE ASN TRP TYR THR ARG ARG ALA MET LEU SEQRES 20 B 318 ALA ALA ILE TYR ASN THR THR GLU LEU VAL MET MET GLN SEQRES 21 B 318 ASP SER SER PRO ASP PHE GLU ASP THR TRP ARG PHE LEU SEQRES 22 B 318 GLU ASN ARG VAL ASN ASP ALA MET ASN MET GLY HIS THR SEQRES 23 B 318 ALA LYS GLN VAL LYS SER THR GLY GLU ALA LEU VAL GLN SEQRES 24 B 318 GLY LEU MET GLY ALA ALA VAL THR LEU LYS ASN LEU THR SEQRES 25 B 318 GLY LEU ASN GLN ARG ARG HET PEF A 401 73 HET BTB A 402 33 HETNAM PEF DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE HETNAM BTB 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL- HETNAM 2 BTB PROPANE-1,3-DIOL HETSYN PEF 3-[AMINOETHYLPHOSPHORYL]-[1,2-DI-PALMITOYL]-SN-GLYCEROL HETSYN BTB BIS-TRIS BUFFER FORMUL 3 PEF C37 H74 N O8 P FORMUL 4 BTB C8 H19 N O5 FORMUL 5 HOH *205(H2 O) HELIX 1 AA1 SER A 95 GLU A 109 1 15 HELIX 2 AA2 PHE A 110 GLY A 115 1 6 HELIX 3 AA3 THR A 117 LEU A 128 1 12 HELIX 4 AA4 SER A 131 PHE A 138 5 8 HELIX 5 AA5 GLY A 142 LEU A 170 1 29 HELIX 6 AA6 LYS A 177 MET A 192 1 16 HELIX 7 AA7 LEU A 193 GLU A 198 5 6 HELIX 8 AA8 HIS A 199 MET A 208 1 10 HELIX 9 AA9 LEU A 209 HIS A 211 5 3 HELIX 10 AB1 ASN A 212 GLY A 232 1 21 HELIX 11 AB2 ASN A 239 GLN A 260 1 22 HELIX 12 AB3 SER A 263 ASP A 265 5 3 HELIX 13 AB4 PHE A 266 MET A 283 1 18 HELIX 14 AB5 THR A 286 ASN A 310 1 25 HELIX 15 AB6 SER B 95 LEU B 108 1 14 HELIX 16 AB7 PHE B 110 GLY B 115 1 6 HELIX 17 AB8 THR B 117 LEU B 128 1 12 HELIX 18 AB9 SER B 131 PHE B 138 5 8 HELIX 19 AC1 GLY B 142 LEU B 170 1 29 HELIX 20 AC2 LYS B 177 MET B 192 1 16 HELIX 21 AC3 LEU B 193 GLU B 198 5 6 HELIX 22 AC4 HIS B 199 MET B 208 1 10 HELIX 23 AC5 ASN B 212 GLY B 232 1 21 HELIX 24 AC6 ASN B 239 GLN B 260 1 22 HELIX 25 AC7 SER B 263 ASP B 265 5 3 HELIX 26 AC8 PHE B 266 ASN B 282 1 17 CISPEP 1 SER B 235 THR B 236 0 -14.78 SITE 1 AC1 10 TRP A 240 TYR A 241 ARG A 244 ALA A 249 SITE 2 AC1 10 ASN A 252 SER A 262 HOH A 525 TYR B 241 SITE 3 AC1 10 ARG B 244 ASN B 252 SITE 1 AC2 4 SER A 218 SER A 222 ARG A 244 SER A 262 CRYST1 38.110 97.390 63.650 90.00 95.40 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026240 0.000000 0.002480 0.00000 SCALE2 0.000000 0.010268 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015781 0.00000