data_6AZE # _entry.id 6AZE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.321 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6AZE WWPDB D_1000230031 # _pdbx_database_related.db_name PDB _pdbx_database_related.details 'same protein with different ligand' _pdbx_database_related.db_id 2F6J _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6AZE _pdbx_database_status.recvd_initial_deposition_date 2017-09-11 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Chen, Z.' 1 ? 'Ruthenburg, A.J.' 2 0000-0003-2709-4564 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To be published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Quantitative and structural assessment of methyllysine analog engagement by cognate binding proteins reveals decrements that can impact qualitative experiment interpretation ; _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chen, Z.' 1 ? primary 'Ruthenburg, A.J.' 2 ? primary 'Notti, R.Q.' 3 ? primary 'Ueberheide, B.' 4 ? primary 'Banaszynski, L.A.' 5 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6AZE _cell.details ? _cell.formula_units_Z ? _cell.length_a 38.263 _cell.length_a_esd ? _cell.length_b 64.130 _cell.length_b_esd ? _cell.length_c 85.670 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AZE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Nucleosome-remodeling factor subunit BPTF' 19699.434 1 ? ? PHD-bromodomain ? 2 polymer syn ALA-ARG-THR-ML3-GLN-THR 765.922 1 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 4 water nat water 18.015 102 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Bromodomain and PHD finger-containing transcription factor,Fetal Alz-50 clone 1 protein,Fetal Alzheimer antigen' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;TKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTEDAMTVLTPLTEKDYEGLKRVLRSLQA HKMAWPFLEPVDPNDAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADMTKIFDNCRYYNPSDSPFYQCAEVLESFFV QKLKGFK ; ;TKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTEDAMTVLTPLTEKDYEGLKRVLRSLQA HKMAWPFLEPVDPNDAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADMTKIFDNCRYYNPSDSPFYQCAEVLESFFV QKLKGFK ; A ? 2 'polypeptide(L)' no yes 'ART(ML3)QT' ARTKQT P ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 LYS n 1 3 LEU n 1 4 TYR n 1 5 CYS n 1 6 ILE n 1 7 CYS n 1 8 LYS n 1 9 THR n 1 10 PRO n 1 11 TYR n 1 12 ASP n 1 13 GLU n 1 14 SER n 1 15 LYS n 1 16 PHE n 1 17 TYR n 1 18 ILE n 1 19 GLY n 1 20 CYS n 1 21 ASP n 1 22 ARG n 1 23 CYS n 1 24 GLN n 1 25 ASN n 1 26 TRP n 1 27 TYR n 1 28 HIS n 1 29 GLY n 1 30 ARG n 1 31 CYS n 1 32 VAL n 1 33 GLY n 1 34 ILE n 1 35 LEU n 1 36 GLN n 1 37 SER n 1 38 GLU n 1 39 ALA n 1 40 GLU n 1 41 LEU n 1 42 ILE n 1 43 ASP n 1 44 GLU n 1 45 TYR n 1 46 VAL n 1 47 CYS n 1 48 PRO n 1 49 GLN n 1 50 CYS n 1 51 GLN n 1 52 SER n 1 53 THR n 1 54 GLU n 1 55 ASP n 1 56 ALA n 1 57 MET n 1 58 THR n 1 59 VAL n 1 60 LEU n 1 61 THR n 1 62 PRO n 1 63 LEU n 1 64 THR n 1 65 GLU n 1 66 LYS n 1 67 ASP n 1 68 TYR n 1 69 GLU n 1 70 GLY n 1 71 LEU n 1 72 LYS n 1 73 ARG n 1 74 VAL n 1 75 LEU n 1 76 ARG n 1 77 SER n 1 78 LEU n 1 79 GLN n 1 80 ALA n 1 81 HIS n 1 82 LYS n 1 83 MET n 1 84 ALA n 1 85 TRP n 1 86 PRO n 1 87 PHE n 1 88 LEU n 1 89 GLU n 1 90 PRO n 1 91 VAL n 1 92 ASP n 1 93 PRO n 1 94 ASN n 1 95 ASP n 1 96 ALA n 1 97 PRO n 1 98 ASP n 1 99 TYR n 1 100 TYR n 1 101 GLY n 1 102 VAL n 1 103 ILE n 1 104 LYS n 1 105 GLU n 1 106 PRO n 1 107 MET n 1 108 ASP n 1 109 LEU n 1 110 ALA n 1 111 THR n 1 112 MET n 1 113 GLU n 1 114 GLU n 1 115 ARG n 1 116 VAL n 1 117 GLN n 1 118 ARG n 1 119 ARG n 1 120 TYR n 1 121 TYR n 1 122 GLU n 1 123 LYS n 1 124 LEU n 1 125 THR n 1 126 GLU n 1 127 PHE n 1 128 VAL n 1 129 ALA n 1 130 ASP n 1 131 MET n 1 132 THR n 1 133 LYS n 1 134 ILE n 1 135 PHE n 1 136 ASP n 1 137 ASN n 1 138 CYS n 1 139 ARG n 1 140 TYR n 1 141 TYR n 1 142 ASN n 1 143 PRO n 1 144 SER n 1 145 ASP n 1 146 SER n 1 147 PRO n 1 148 PHE n 1 149 TYR n 1 150 GLN n 1 151 CYS n 1 152 ALA n 1 153 GLU n 1 154 VAL n 1 155 LEU n 1 156 GLU n 1 157 SER n 1 158 PHE n 1 159 PHE n 1 160 VAL n 1 161 GLN n 1 162 LYS n 1 163 LEU n 1 164 LYS n 1 165 GLY n 1 166 PHE n 1 167 LYS n 2 1 ALA n 2 2 ARG n 2 3 THR n 2 4 ML3 n 2 5 GLN n 2 6 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 167 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BPTF, FAC1, FALZ' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 6 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name Human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details 'synthetic peptide made by SPSS' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP BPTF_HUMAN Q12830 ? 1 ;TKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTEDAMTVLTPLTEKDYEGLKRVLRSLQA HKMAWPFLEPVDPNDAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADMTKIFDNCRYYNPSDSPFYQCAEVLESFFV QKLKGFK ; 2866 2 PDB 6AZE 6AZE ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6AZE A 1 ? 167 ? Q12830 2866 ? 3032 ? 7 173 2 2 6AZE P 1 ? 6 ? 6AZE 1 ? 6 ? 1 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 ML3 'L-peptide linking' n '2-{[(2R)-2-amino-2-carboxyethyl]sulfanyl}-N,N,N-trimethylethanaminium' ? 'C8 H19 N2 O2 S 1' 207.314 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6AZE _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.57 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 52.10 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;1uL complex solution (~8 mg/ml of [1:1.2 protein to peptide molar ratio] in 100 mM KCl, 10 mM HEPES KOH, pH 7.5 and 5 mM DTT) + 1 uL reservoir (12% (w/v) polyethylene glycol 6000, 5% glycerol, 100 mM KCl, and 10 mM MgCl2 buffer), equilibrated against 1mL of reservoir in Nextal hanging drop plate format. ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2011-11-21 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97856 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 21-ID-G' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97856 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 21-ID-G _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6AZE _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.450 _reflns.d_resolution_low 25.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 6994 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 85.200 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.800 _reflns.pdbx_Rmerge_I_obs 0.103 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 7.000 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.050 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.450 2.490 ? ? ? ? ? ? 307 76.600 ? ? ? ? 0.319 ? ? ? ? ? ? ? ? 3.000 ? 1.083 ? ? ? ? ? 1 1 ? ? 2.490 2.540 ? ? ? ? ? ? 312 78.400 ? ? ? ? 0.273 ? ? ? ? ? ? ? ? 3.100 ? 1.002 ? ? ? ? ? 2 1 ? ? 2.540 2.590 ? ? ? ? ? ? 326 81.300 ? ? ? ? 0.251 ? ? ? ? ? ? ? ? 3.500 ? 0.980 ? ? ? ? ? 3 1 ? ? 2.590 2.640 ? ? ? ? ? ? 332 85.800 ? ? ? ? 0.284 ? ? ? ? ? ? ? ? 3.700 ? 1.080 ? ? ? ? ? 4 1 ? ? 2.640 2.700 ? ? ? ? ? ? 355 85.100 ? ? ? ? 0.219 ? ? ? ? ? ? ? ? 4.000 ? 1.073 ? ? ? ? ? 5 1 ? ? 2.700 2.760 ? ? ? ? ? ? 355 86.800 ? ? ? ? 0.226 ? ? ? ? ? ? ? ? 4.400 ? 1.055 ? ? ? ? ? 6 1 ? ? 2.760 2.830 ? ? ? ? ? ? 338 88.300 ? ? ? ? 0.209 ? ? ? ? ? ? ? ? 4.600 ? 1.097 ? ? ? ? ? 7 1 ? ? 2.830 2.900 ? ? ? ? ? ? 364 89.200 ? ? ? ? 0.182 ? ? ? ? ? ? ? ? 4.800 ? 1.035 ? ? ? ? ? 8 1 ? ? 2.900 2.990 ? ? ? ? ? ? 364 89.400 ? ? ? ? 0.155 ? ? ? ? ? ? ? ? 4.900 ? 1.065 ? ? ? ? ? 9 1 ? ? 2.990 3.090 ? ? ? ? ? ? 349 88.600 ? ? ? ? 0.153 ? ? ? ? ? ? ? ? 5.200 ? 1.051 ? ? ? ? ? 10 1 ? ? 3.090 3.200 ? ? ? ? ? ? 374 88.600 ? ? ? ? 0.146 ? ? ? ? ? ? ? ? 5.300 ? 1.094 ? ? ? ? ? 11 1 ? ? 3.200 3.320 ? ? ? ? ? ? 342 88.100 ? ? ? ? 0.123 ? ? ? ? ? ? ? ? 5.400 ? 1.092 ? ? ? ? ? 12 1 ? ? 3.320 3.470 ? ? ? ? ? ? 370 87.700 ? ? ? ? 0.113 ? ? ? ? ? ? ? ? 5.400 ? 1.063 ? ? ? ? ? 13 1 ? ? 3.470 3.660 ? ? ? ? ? ? 348 87.400 ? ? ? ? 0.090 ? ? ? ? ? ? ? ? 5.400 ? 1.082 ? ? ? ? ? 14 1 ? ? 3.660 3.890 ? ? ? ? ? ? 362 86.200 ? ? ? ? 0.073 ? ? ? ? ? ? ? ? 5.500 ? 1.040 ? ? ? ? ? 15 1 ? ? 3.890 4.180 ? ? ? ? ? ? 350 85.200 ? ? ? ? 0.067 ? ? ? ? ? ? ? ? 5.500 ? 1.021 ? ? ? ? ? 16 1 ? ? 4.180 4.600 ? ? ? ? ? ? 356 86.000 ? ? ? ? 0.065 ? ? ? ? ? ? ? ? 5.400 ? 1.060 ? ? ? ? ? 17 1 ? ? 4.600 5.260 ? ? ? ? ? ? 357 84.400 ? ? ? ? 0.062 ? ? ? ? ? ? ? ? 5.400 ? 0.999 ? ? ? ? ? 18 1 ? ? 5.260 6.610 ? ? ? ? ? ? 366 82.600 ? ? ? ? 0.077 ? ? ? ? ? ? ? ? 5.300 ? 1.024 ? ? ? ? ? 19 1 ? ? 6.610 25.000 ? ? ? ? ? ? 367 78.900 ? ? ? ? 0.066 ? ? ? ? ? ? ? ? 5.000 ? 0.993 ? ? ? ? ? 20 1 ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 76.510 _refine.B_iso_mean 24.5300 _refine.B_iso_min 11.090 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details PHENIX _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6AZE _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.4510 _refine.ls_d_res_low 23.6230 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 6975 _refine.ls_number_reflns_R_free 356 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 85.2200 _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1814 _refine.ls_R_factor_R_free 0.2131 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1797 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.360 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details 'Random selection' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 21.3800 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2600 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.4510 _refine_hist.d_res_low 23.6230 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 102 _refine_hist.number_atoms_total 1517 _refine_hist.pdbx_number_residues_total 173 _refine_hist.pdbx_B_iso_mean_ligand 19.18 _refine_hist.pdbx_B_iso_mean_solvent 27.04 _refine_hist.pdbx_number_atoms_protein 1413 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.012 ? 1456 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.469 ? 1973 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.056 ? 206 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.009 ? 252 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 15.028 ? 542 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.4507 2.8048 2200 . 113 2087 83.0000 . . . 0.2952 0.0000 0.2153 . . . . . . 3 . . . 'X-RAY DIFFRACTION' 2.8048 3.5318 2391 . 121 2270 89.0000 . . . 0.2219 0.0000 0.1908 . . . . . . 3 . . . 'X-RAY DIFFRACTION' 3.5318 23.6246 2384 . 122 2262 84.0000 . . . 0.1774 0.0000 0.1584 . . . . . . 3 . . . # _struct.entry_id 6AZE _struct.title 'Crystal Structure of the BPTF PHD-bromodomain module bound to H3KC4me3 methyl lysine analog' _struct.pdbx_descriptor 'Nucleosome-remodeling factor subunit BPTF, ALA-ARG-THR-ML3-GLN-THR' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6AZE _struct_keywords.text 'PHD-finger, bromodomain, histone reader, methyllsine analog, MLA, GENE REGULATION' _struct_keywords.pdbx_keywords 'GENE REGULATION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LEU A 35 ? LEU A 41 ? LEU A 41 LEU A 47 1 ? 7 HELX_P HELX_P2 AA2 CYS A 47 ? THR A 58 ? CYS A 53 THR A 64 1 ? 12 HELX_P HELX_P3 AA3 THR A 64 ? ALA A 80 ? THR A 70 ALA A 86 1 ? 17 HELX_P HELX_P4 AA4 HIS A 81 ? LEU A 88 ? HIS A 87 LEU A 94 5 ? 8 HELX_P HELX_P5 AA5 ASP A 92 ? ASP A 95 ? ASP A 98 ASP A 101 5 ? 4 HELX_P HELX_P6 AA6 ALA A 96 ? ILE A 103 ? ALA A 102 ILE A 109 1 ? 8 HELX_P HELX_P7 AA7 ASP A 108 ? ARG A 118 ? ASP A 114 ARG A 124 1 ? 11 HELX_P HELX_P8 AA8 LYS A 123 ? ASN A 142 ? LYS A 129 ASN A 148 1 ? 20 HELX_P HELX_P9 AA9 SER A 146 ? LYS A 164 ? SER A 152 LYS A 170 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A CYS 5 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 11 A ZN 201 1_555 ? ? ? ? ? ? ? 2.447 ? metalc2 metalc ? ? A CYS 7 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 13 A ZN 201 1_555 ? ? ? ? ? ? ? 2.358 ? metalc3 metalc ? ? A CYS 20 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 26 A ZN 202 1_555 ? ? ? ? ? ? ? 2.363 ? metalc4 metalc ? ? A CYS 23 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 29 A ZN 202 1_555 ? ? ? ? ? ? ? 2.221 ? metalc5 metalc ? ? A HIS 28 ND1 ? ? ? 1_555 C ZN . ZN ? ? A HIS 34 A ZN 201 1_555 ? ? ? ? ? ? ? 2.030 ? metalc6 metalc ? ? A CYS 31 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 37 A ZN 201 1_555 ? ? ? ? ? ? ? 2.274 ? metalc7 metalc ? ? A CYS 47 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 53 A ZN 202 1_555 ? ? ? ? ? ? ? 2.213 ? metalc8 metalc ? ? A CYS 50 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 56 A ZN 202 1_555 ? ? ? ? ? ? ? 2.216 ? covale1 covale both ? B THR 3 C ? ? ? 1_555 B ML3 4 N ? ? P THR 3 P ML3 4 1_555 ? ? ? ? ? ? ? 1.328 ? covale2 covale both ? B ML3 4 C ? ? ? 1_555 B GLN 5 N ? ? P ML3 4 P GLN 5 1_555 ? ? ? ? ? ? ? 1.334 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? covale ? ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TRP A 26 ? HIS A 28 ? TRP A 32 HIS A 34 AA1 2 TYR A 17 ? GLY A 19 ? TYR A 23 GLY A 25 AA1 3 THR B 3 ? ML3 B 4 ? THR P 3 ML3 P 4 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O TYR A 27 ? O TYR A 33 N ILE A 18 ? N ILE A 24 AA1 2 3 N TYR A 17 ? N TYR A 23 O ML3 B 4 ? O ML3 P 4 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 201 ? 4 'binding site for residue ZN A 201' AC2 Software A ZN 202 ? 4 'binding site for residue ZN A 202' AC3 Software P ML3 4 ? 9 'binding site for Ligand residues ML3 P 4 through GLN P 5 bound to THR P 3' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 5 ? CYS A 11 . ? 1_555 ? 2 AC1 4 CYS A 7 ? CYS A 13 . ? 1_555 ? 3 AC1 4 HIS A 28 ? HIS A 34 . ? 1_555 ? 4 AC1 4 CYS A 31 ? CYS A 37 . ? 1_555 ? 5 AC2 4 CYS A 20 ? CYS A 26 . ? 1_555 ? 6 AC2 4 CYS A 23 ? CYS A 29 . ? 1_555 ? 7 AC2 4 CYS A 47 ? CYS A 53 . ? 1_555 ? 8 AC2 4 CYS A 50 ? CYS A 56 . ? 1_555 ? 9 AC3 9 TYR A 4 ? TYR A 10 . ? 1_555 ? 10 AC3 9 TYR A 11 ? TYR A 17 . ? 1_555 ? 11 AC3 9 LYS A 15 ? LYS A 21 . ? 1_555 ? 12 AC3 9 PHE A 16 ? PHE A 22 . ? 1_555 ? 13 AC3 9 TYR A 17 ? TYR A 23 . ? 1_555 ? 14 AC3 9 TRP A 26 ? TRP A 32 . ? 1_555 ? 15 AC3 9 HOH E . ? HOH A 306 . ? 1_555 ? 16 AC3 9 THR B 3 ? THR P 3 . ? 1_555 ? 17 AC3 9 THR B 6 ? THR P 6 . ? 1_555 ? # _atom_sites.entry_id 6AZE _atom_sites.fract_transf_matrix[1][1] 0.026135 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015593 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011673 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 7 7 THR THR A . n A 1 2 LYS 2 8 8 LYS LYS A . n A 1 3 LEU 3 9 9 LEU LEU A . n A 1 4 TYR 4 10 10 TYR TYR A . n A 1 5 CYS 5 11 11 CYS CYS A . n A 1 6 ILE 6 12 12 ILE ILE A . n A 1 7 CYS 7 13 13 CYS CYS A . n A 1 8 LYS 8 14 14 LYS LYS A . n A 1 9 THR 9 15 15 THR THR A . n A 1 10 PRO 10 16 16 PRO PRO A . n A 1 11 TYR 11 17 17 TYR TYR A . n A 1 12 ASP 12 18 18 ASP ASP A . n A 1 13 GLU 13 19 19 GLU GLU A . n A 1 14 SER 14 20 20 SER SER A . n A 1 15 LYS 15 21 21 LYS LYS A . n A 1 16 PHE 16 22 22 PHE PHE A . n A 1 17 TYR 17 23 23 TYR TYR A . n A 1 18 ILE 18 24 24 ILE ILE A . n A 1 19 GLY 19 25 25 GLY GLY A . n A 1 20 CYS 20 26 26 CYS CYS A . n A 1 21 ASP 21 27 27 ASP ASP A . n A 1 22 ARG 22 28 28 ARG ARG A . n A 1 23 CYS 23 29 29 CYS CYS A . n A 1 24 GLN 24 30 30 GLN GLN A . n A 1 25 ASN 25 31 31 ASN ASN A . n A 1 26 TRP 26 32 32 TRP TRP A . n A 1 27 TYR 27 33 33 TYR TYR A . n A 1 28 HIS 28 34 34 HIS HIS A . n A 1 29 GLY 29 35 35 GLY GLY A . n A 1 30 ARG 30 36 36 ARG ARG A . n A 1 31 CYS 31 37 37 CYS CYS A . n A 1 32 VAL 32 38 38 VAL VAL A . n A 1 33 GLY 33 39 39 GLY GLY A . n A 1 34 ILE 34 40 40 ILE ILE A . n A 1 35 LEU 35 41 41 LEU LEU A . n A 1 36 GLN 36 42 42 GLN GLN A . n A 1 37 SER 37 43 43 SER SER A . n A 1 38 GLU 38 44 44 GLU GLU A . n A 1 39 ALA 39 45 45 ALA ALA A . n A 1 40 GLU 40 46 46 GLU GLU A . n A 1 41 LEU 41 47 47 LEU LEU A . n A 1 42 ILE 42 48 48 ILE ILE A . n A 1 43 ASP 43 49 49 ASP ASP A . n A 1 44 GLU 44 50 50 GLU GLU A . n A 1 45 TYR 45 51 51 TYR TYR A . n A 1 46 VAL 46 52 52 VAL VAL A . n A 1 47 CYS 47 53 53 CYS CYS A . n A 1 48 PRO 48 54 54 PRO PRO A . n A 1 49 GLN 49 55 55 GLN GLN A . n A 1 50 CYS 50 56 56 CYS CYS A . n A 1 51 GLN 51 57 57 GLN GLN A . n A 1 52 SER 52 58 58 SER SER A . n A 1 53 THR 53 59 59 THR THR A . n A 1 54 GLU 54 60 60 GLU GLU A . n A 1 55 ASP 55 61 61 ASP ASP A . n A 1 56 ALA 56 62 62 ALA ALA A . n A 1 57 MET 57 63 63 MET MET A . n A 1 58 THR 58 64 64 THR THR A . n A 1 59 VAL 59 65 65 VAL VAL A . n A 1 60 LEU 60 66 66 LEU LEU A . n A 1 61 THR 61 67 67 THR THR A . n A 1 62 PRO 62 68 68 PRO PRO A . n A 1 63 LEU 63 69 69 LEU LEU A . n A 1 64 THR 64 70 70 THR THR A . n A 1 65 GLU 65 71 71 GLU GLU A . n A 1 66 LYS 66 72 72 LYS LYS A . n A 1 67 ASP 67 73 73 ASP ASP A . n A 1 68 TYR 68 74 74 TYR TYR A . n A 1 69 GLU 69 75 75 GLU GLU A . n A 1 70 GLY 70 76 76 GLY GLY A . n A 1 71 LEU 71 77 77 LEU LEU A . n A 1 72 LYS 72 78 78 LYS LYS A . n A 1 73 ARG 73 79 79 ARG ARG A . n A 1 74 VAL 74 80 80 VAL VAL A . n A 1 75 LEU 75 81 81 LEU LEU A . n A 1 76 ARG 76 82 82 ARG ARG A . n A 1 77 SER 77 83 83 SER SER A . n A 1 78 LEU 78 84 84 LEU LEU A . n A 1 79 GLN 79 85 85 GLN GLN A . n A 1 80 ALA 80 86 86 ALA ALA A . n A 1 81 HIS 81 87 87 HIS HIS A . n A 1 82 LYS 82 88 88 LYS LYS A . n A 1 83 MET 83 89 89 MET MET A . n A 1 84 ALA 84 90 90 ALA ALA A . n A 1 85 TRP 85 91 91 TRP TRP A . n A 1 86 PRO 86 92 92 PRO PRO A . n A 1 87 PHE 87 93 93 PHE PHE A . n A 1 88 LEU 88 94 94 LEU LEU A . n A 1 89 GLU 89 95 95 GLU GLU A . n A 1 90 PRO 90 96 96 PRO PRO A . n A 1 91 VAL 91 97 97 VAL VAL A . n A 1 92 ASP 92 98 98 ASP ASP A . n A 1 93 PRO 93 99 99 PRO PRO A . n A 1 94 ASN 94 100 100 ASN ASN A . n A 1 95 ASP 95 101 101 ASP ASP A . n A 1 96 ALA 96 102 102 ALA ALA A . n A 1 97 PRO 97 103 103 PRO PRO A . n A 1 98 ASP 98 104 104 ASP ASP A . n A 1 99 TYR 99 105 105 TYR TYR A . n A 1 100 TYR 100 106 106 TYR TYR A . n A 1 101 GLY 101 107 107 GLY GLY A . n A 1 102 VAL 102 108 108 VAL VAL A . n A 1 103 ILE 103 109 109 ILE ILE A . n A 1 104 LYS 104 110 110 LYS LYS A . n A 1 105 GLU 105 111 111 GLU GLU A . n A 1 106 PRO 106 112 112 PRO PRO A . n A 1 107 MET 107 113 113 MET MET A . n A 1 108 ASP 108 114 114 ASP ASP A . n A 1 109 LEU 109 115 115 LEU LEU A . n A 1 110 ALA 110 116 116 ALA ALA A . n A 1 111 THR 111 117 117 THR THR A . n A 1 112 MET 112 118 118 MET MET A . n A 1 113 GLU 113 119 119 GLU GLU A . n A 1 114 GLU 114 120 120 GLU GLU A . n A 1 115 ARG 115 121 121 ARG ARG A . n A 1 116 VAL 116 122 122 VAL VAL A . n A 1 117 GLN 117 123 123 GLN GLN A . n A 1 118 ARG 118 124 124 ARG ARG A . n A 1 119 ARG 119 125 125 ARG ARG A . n A 1 120 TYR 120 126 126 TYR TYR A . n A 1 121 TYR 121 127 127 TYR TYR A . n A 1 122 GLU 122 128 128 GLU GLU A . n A 1 123 LYS 123 129 129 LYS LYS A . n A 1 124 LEU 124 130 130 LEU LEU A . n A 1 125 THR 125 131 131 THR THR A . n A 1 126 GLU 126 132 132 GLU GLU A . n A 1 127 PHE 127 133 133 PHE PHE A . n A 1 128 VAL 128 134 134 VAL VAL A . n A 1 129 ALA 129 135 135 ALA ALA A . n A 1 130 ASP 130 136 136 ASP ASP A . n A 1 131 MET 131 137 137 MET MET A . n A 1 132 THR 132 138 138 THR THR A . n A 1 133 LYS 133 139 139 LYS LYS A . n A 1 134 ILE 134 140 140 ILE ILE A . n A 1 135 PHE 135 141 141 PHE PHE A . n A 1 136 ASP 136 142 142 ASP ASP A . n A 1 137 ASN 137 143 143 ASN ASN A . n A 1 138 CYS 138 144 144 CYS CYS A . n A 1 139 ARG 139 145 145 ARG ARG A . n A 1 140 TYR 140 146 146 TYR TYR A . n A 1 141 TYR 141 147 147 TYR TYR A . n A 1 142 ASN 142 148 148 ASN ASN A . n A 1 143 PRO 143 149 149 PRO PRO A . n A 1 144 SER 144 150 150 SER SER A . n A 1 145 ASP 145 151 151 ASP ASP A . n A 1 146 SER 146 152 152 SER SER A . n A 1 147 PRO 147 153 153 PRO PRO A . n A 1 148 PHE 148 154 154 PHE PHE A . n A 1 149 TYR 149 155 155 TYR TYR A . n A 1 150 GLN 150 156 156 GLN GLN A . n A 1 151 CYS 151 157 157 CYS CYS A . n A 1 152 ALA 152 158 158 ALA ALA A . n A 1 153 GLU 153 159 159 GLU GLU A . n A 1 154 VAL 154 160 160 VAL VAL A . n A 1 155 LEU 155 161 161 LEU LEU A . n A 1 156 GLU 156 162 162 GLU GLU A . n A 1 157 SER 157 163 163 SER SER A . n A 1 158 PHE 158 164 164 PHE PHE A . n A 1 159 PHE 159 165 165 PHE PHE A . n A 1 160 VAL 160 166 166 VAL VAL A . n A 1 161 GLN 161 167 167 GLN GLN A . n A 1 162 LYS 162 168 168 LYS LYS A . n A 1 163 LEU 163 169 169 LEU LEU A . n A 1 164 LYS 164 170 170 LYS LYS A . n A 1 165 GLY 165 171 171 GLY GLY A . n A 1 166 PHE 166 172 172 PHE PHE A . n A 1 167 LYS 167 173 173 LYS LYS A . n B 2 1 ALA 1 1 1 ALA ALA P . n B 2 2 ARG 2 2 2 ARG ARG P . n B 2 3 THR 3 3 3 THR THR P . n B 2 4 ML3 4 4 4 ML3 ML3 P . n B 2 5 GLN 5 5 5 GLN GLN P . n B 2 6 THR 6 6 6 THR THR P . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN 1 201 1 ZN ZN A . D 3 ZN 1 202 2 ZN ZN A . E 4 HOH 1 301 26 HOH HOH A . E 4 HOH 2 302 53 HOH HOH A . E 4 HOH 3 303 1 HOH HOH A . E 4 HOH 4 304 57 HOH HOH A . E 4 HOH 5 305 58 HOH HOH A . E 4 HOH 6 306 2 HOH HOH A . E 4 HOH 7 307 51 HOH HOH A . E 4 HOH 8 308 39 HOH HOH A . E 4 HOH 9 309 3 HOH HOH A . E 4 HOH 10 310 30 HOH HOH A . E 4 HOH 11 311 74 HOH HOH A . E 4 HOH 12 312 9 HOH HOH A . E 4 HOH 13 313 28 HOH HOH A . E 4 HOH 14 314 24 HOH HOH A . E 4 HOH 15 315 59 HOH HOH A . E 4 HOH 16 316 72 HOH HOH A . E 4 HOH 17 317 98 HOH HOH A . E 4 HOH 18 318 52 HOH HOH A . E 4 HOH 19 319 47 HOH HOH A . E 4 HOH 20 320 14 HOH HOH A . E 4 HOH 21 321 46 HOH HOH A . E 4 HOH 22 322 20 HOH HOH A . E 4 HOH 23 323 70 HOH HOH A . E 4 HOH 24 324 18 HOH HOH A . E 4 HOH 25 325 22 HOH HOH A . E 4 HOH 26 326 23 HOH HOH A . E 4 HOH 27 327 12 HOH HOH A . E 4 HOH 28 328 56 HOH HOH A . E 4 HOH 29 329 90 HOH HOH A . E 4 HOH 30 330 16 HOH HOH A . E 4 HOH 31 331 49 HOH HOH A . E 4 HOH 32 332 69 HOH HOH A . E 4 HOH 33 333 81 HOH HOH A . E 4 HOH 34 334 11 HOH HOH A . E 4 HOH 35 335 54 HOH HOH A . E 4 HOH 36 336 27 HOH HOH A . E 4 HOH 37 337 15 HOH HOH A . E 4 HOH 38 338 50 HOH HOH A . E 4 HOH 39 339 40 HOH HOH A . E 4 HOH 40 340 5 HOH HOH A . E 4 HOH 41 341 97 HOH HOH A . E 4 HOH 42 342 10 HOH HOH A . E 4 HOH 43 343 19 HOH HOH A . E 4 HOH 44 344 68 HOH HOH A . E 4 HOH 45 345 7 HOH HOH A . E 4 HOH 46 346 21 HOH HOH A . E 4 HOH 47 347 25 HOH HOH A . E 4 HOH 48 348 64 HOH HOH A . E 4 HOH 49 349 91 HOH HOH A . E 4 HOH 50 350 17 HOH HOH A . E 4 HOH 51 351 35 HOH HOH A . E 4 HOH 52 352 29 HOH HOH A . E 4 HOH 53 353 89 HOH HOH A . E 4 HOH 54 354 42 HOH HOH A . E 4 HOH 55 355 36 HOH HOH A . E 4 HOH 56 356 43 HOH HOH A . E 4 HOH 57 357 61 HOH HOH A . E 4 HOH 58 358 96 HOH HOH A . E 4 HOH 59 359 38 HOH HOH A . E 4 HOH 60 360 63 HOH HOH A . E 4 HOH 61 361 95 HOH HOH A . E 4 HOH 62 362 87 HOH HOH A . E 4 HOH 63 363 82 HOH HOH A . E 4 HOH 64 364 8 HOH HOH A . E 4 HOH 65 365 78 HOH HOH A . E 4 HOH 66 366 33 HOH HOH A . E 4 HOH 67 367 6 HOH HOH A . E 4 HOH 68 368 94 HOH HOH A . E 4 HOH 69 369 84 HOH HOH A . E 4 HOH 70 370 45 HOH HOH A . E 4 HOH 71 371 101 HOH HOH A . E 4 HOH 72 372 75 HOH HOH A . E 4 HOH 73 373 60 HOH HOH A . E 4 HOH 74 374 76 HOH HOH A . E 4 HOH 75 375 67 HOH HOH A . E 4 HOH 76 376 79 HOH HOH A . E 4 HOH 77 377 13 HOH HOH A . E 4 HOH 78 378 73 HOH HOH A . E 4 HOH 79 379 85 HOH HOH A . E 4 HOH 80 380 92 HOH HOH A . E 4 HOH 81 381 48 HOH HOH A . E 4 HOH 82 382 62 HOH HOH A . E 4 HOH 83 383 102 HOH HOH A . E 4 HOH 84 384 71 HOH HOH A . E 4 HOH 85 385 100 HOH HOH A . E 4 HOH 86 386 65 HOH HOH A . E 4 HOH 87 387 34 HOH HOH A . E 4 HOH 88 388 31 HOH HOH A . E 4 HOH 89 389 66 HOH HOH A . E 4 HOH 90 390 44 HOH HOH A . E 4 HOH 91 391 86 HOH HOH A . E 4 HOH 92 392 37 HOH HOH A . E 4 HOH 93 393 93 HOH HOH A . E 4 HOH 94 394 55 HOH HOH A . E 4 HOH 95 395 80 HOH HOH A . E 4 HOH 96 396 77 HOH HOH A . E 4 HOH 97 397 83 HOH HOH A . E 4 HOH 98 398 32 HOH HOH A . E 4 HOH 99 399 99 HOH HOH A . E 4 HOH 100 400 41 HOH HOH A . E 4 HOH 101 401 88 HOH HOH A . F 4 HOH 1 101 4 HOH HOH P . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1060 ? 1 MORE -3 ? 1 'SSA (A^2)' 10700 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 5 ? A CYS 11 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 SG ? A CYS 7 ? A CYS 13 ? 1_555 106.2 ? 2 SG ? A CYS 5 ? A CYS 11 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 ND1 ? A HIS 28 ? A HIS 34 ? 1_555 102.4 ? 3 SG ? A CYS 7 ? A CYS 13 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 ND1 ? A HIS 28 ? A HIS 34 ? 1_555 95.6 ? 4 SG ? A CYS 5 ? A CYS 11 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 SG ? A CYS 31 ? A CYS 37 ? 1_555 109.3 ? 5 SG ? A CYS 7 ? A CYS 13 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 SG ? A CYS 31 ? A CYS 37 ? 1_555 124.9 ? 6 ND1 ? A HIS 28 ? A HIS 34 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 SG ? A CYS 31 ? A CYS 37 ? 1_555 115.7 ? 7 SG ? A CYS 20 ? A CYS 26 ? 1_555 ZN ? D ZN . ? A ZN 202 ? 1_555 SG ? A CYS 23 ? A CYS 29 ? 1_555 102.5 ? 8 SG ? A CYS 20 ? A CYS 26 ? 1_555 ZN ? D ZN . ? A ZN 202 ? 1_555 SG ? A CYS 47 ? A CYS 53 ? 1_555 108.1 ? 9 SG ? A CYS 23 ? A CYS 29 ? 1_555 ZN ? D ZN . ? A ZN 202 ? 1_555 SG ? A CYS 47 ? A CYS 53 ? 1_555 119.9 ? 10 SG ? A CYS 20 ? A CYS 26 ? 1_555 ZN ? D ZN . ? A ZN 202 ? 1_555 SG ? A CYS 50 ? A CYS 56 ? 1_555 110.0 ? 11 SG ? A CYS 23 ? A CYS 29 ? 1_555 ZN ? D ZN . ? A ZN 202 ? 1_555 SG ? A CYS 50 ? A CYS 56 ? 1_555 114.3 ? 12 SG ? A CYS 47 ? A CYS 53 ? 1_555 ZN ? D ZN . ? A ZN 202 ? 1_555 SG ? A CYS 50 ? A CYS 56 ? 1_555 101.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-09-19 2 'Structure model' 1 1 2020-01-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Author supporting evidence' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category pdbx_audit_support # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 2 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_pdbx_audit_support.funding_organization' # _pdbx_phasing_MR.entry_id 6AZE _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 5.660 _pdbx_phasing_MR.d_res_low_rotation 23.620 _pdbx_phasing_MR.d_res_high_translation 5.660 _pdbx_phasing_MR.d_res_low_translation 23.620 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? DENZO ? ? ? . 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? . 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? 2.5.5 3 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 398 ? ? O A HOH 399 ? ? 1.86 2 1 O A HOH 344 ? ? O A HOH 375 ? ? 2.07 3 1 O A HOH 315 ? ? O A HOH 384 ? ? 2.14 4 1 O A HOH 376 ? ? O A HOH 382 ? ? 2.17 5 1 O A HOH 308 ? ? O A HOH 381 ? ? 2.18 6 1 O A HOH 373 ? ? O A HOH 394 ? ? 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 11 ? ? 71.13 171.12 2 1 ASN A 100 ? ? -69.25 31.90 3 1 ASP A 101 ? ? -137.65 -48.45 4 1 PRO A 103 ? ? -53.83 -77.40 5 1 GLU A 111 ? ? -118.50 70.25 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A THR 7 ? OG1 ? A THR 1 OG1 2 1 Y 1 A THR 7 ? CG2 ? A THR 1 CG2 3 1 Y 1 A LYS 8 ? O ? A LYS 2 O 4 1 Y 1 A LYS 8 ? CD ? A LYS 2 CD 5 1 Y 1 A LYS 8 ? CE ? A LYS 2 CE 6 1 Y 1 A LYS 8 ? NZ ? A LYS 2 NZ 7 1 Y 1 A ARG 36 ? CG ? A ARG 30 CG 8 1 Y 1 A ARG 36 ? CD ? A ARG 30 CD 9 1 Y 1 A ARG 36 ? NE ? A ARG 30 NE 10 1 Y 1 A ARG 36 ? CZ ? A ARG 30 CZ 11 1 Y 1 A ARG 36 ? NH1 ? A ARG 30 NH1 12 1 Y 1 A ARG 36 ? NH2 ? A ARG 30 NH2 13 1 Y 1 P GLN 5 ? CG ? B GLN 5 CG 14 1 Y 1 P GLN 5 ? CD ? B GLN 5 CD 15 1 Y 1 P GLN 5 ? OE1 ? B GLN 5 OE1 16 1 Y 1 P GLN 5 ? NE2 ? B GLN 5 NE2 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' R01-GM115945 1 'National Institutes of Health/National Human Genome Research Institute (NIH/NHGRI)' 'United States' R21HG007426 2 'American Cancer Society' 'United States' '130230- RSG-16-248-01-DMC' 3 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id ML3 _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id ML3 _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'isothermal titration calorimetry' _pdbx_struct_assembly_auth_evidence.details 'monomeric binding model fits well. No evidence for oligomerization from gel filtration and DLS.' #