HEADER MEMBRANE PROTEIN 19-SEP-17 6B21 TITLE CRYSTAL STRUCTURE OF AMTB FROM E. COLI BOUND TO TOPFLUOR CARDIOLIPIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMMONIA CHANNEL; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AMMONIA TRANSPORTER; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: AMTB, YBAG, B0451, JW0441; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: C43(DE3); SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS AMMONIA CHANNEL, AMTB, CARDIOLIPIN, TRANSPORTER, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.D.BOONE,A.LAGANOWSKY REVDAT 6 04-OCT-23 6B21 1 REMARK REVDAT 5 01-JAN-20 6B21 1 REMARK REVDAT 4 28-MAR-18 6B21 1 JRNL REVDAT 3 21-MAR-18 6B21 1 JRNL REVDAT 2 14-MAR-18 6B21 1 REMARK REVDAT 1 07-MAR-18 6B21 0 JRNL AUTH J.W.PATRICK,C.D.BOONE,W.LIU,G.M.CONOVER,Y.LIU,X.CONG, JRNL AUTH 2 A.LAGANOWSKY JRNL TITL ALLOSTERY REVEALED WITHIN LIPID BINDING EVENTS TO MEMBRANE JRNL TITL 2 PROTEINS. JRNL REF PROC. NATL. ACAD. SCI. V. 115 2976 2018 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 29507234 JRNL DOI 10.1073/PNAS.1719813115 REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 56.22 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 21556 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1079 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 56.2336 - 4.8992 0.96 2608 138 0.1752 0.2334 REMARK 3 2 4.8992 - 3.8889 0.98 2565 135 0.1552 0.1803 REMARK 3 3 3.8889 - 3.3974 0.98 2546 134 0.1656 0.2095 REMARK 3 4 3.3974 - 3.0868 0.99 2556 135 0.1676 0.2137 REMARK 3 5 3.0868 - 2.8656 0.99 2580 135 0.1635 0.2212 REMARK 3 6 2.8656 - 2.6966 0.99 2538 134 0.1761 0.2085 REMARK 3 7 2.6966 - 2.5616 1.00 2552 134 0.1933 0.2246 REMARK 3 8 2.5616 - 2.4501 0.99 2532 134 0.2206 0.2655 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 48.47 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 61.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 2817 REMARK 3 ANGLE : 0.618 3834 REMARK 3 CHIRALITY : 0.020 452 REMARK 3 PLANARITY : 0.003 460 REMARK 3 DIHEDRAL : 18.294 923 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.8625 9.9813 51.5840 REMARK 3 T TENSOR REMARK 3 T11: 0.4066 T22: 0.3542 REMARK 3 T33: 0.3668 T12: -0.0113 REMARK 3 T13: 0.0109 T23: 0.0322 REMARK 3 L TENSOR REMARK 3 L11: 0.5730 L22: 0.3852 REMARK 3 L33: 0.1078 L12: 0.1562 REMARK 3 L13: -0.2463 L23: -0.1183 REMARK 3 S TENSOR REMARK 3 S11: -0.0922 S12: -0.0269 S13: 0.0868 REMARK 3 S21: -0.0127 S22: -0.1073 S23: -0.1447 REMARK 3 S31: -0.1815 S32: -0.0413 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 62 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.1293 21.2967 56.0514 REMARK 3 T TENSOR REMARK 3 T11: 0.4441 T22: 0.3807 REMARK 3 T33: 0.4706 T12: -0.0391 REMARK 3 T13: 0.0165 T23: 0.0169 REMARK 3 L TENSOR REMARK 3 L11: 0.5037 L22: 1.0299 REMARK 3 L33: 0.4564 L12: -0.3333 REMARK 3 L13: -0.3440 L23: -0.2247 REMARK 3 S TENSOR REMARK 3 S11: -0.0406 S12: -0.0484 S13: 0.1056 REMARK 3 S21: -0.0004 S22: -0.0545 S23: -0.1176 REMARK 3 S31: -0.1243 S32: 0.0133 S33: -0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 198 THROUGH 301 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.9606 15.4241 50.3704 REMARK 3 T TENSOR REMARK 3 T11: 0.4104 T22: 0.3940 REMARK 3 T33: 0.4231 T12: 0.0272 REMARK 3 T13: -0.0289 T23: 0.0409 REMARK 3 L TENSOR REMARK 3 L11: 0.2658 L22: 0.5146 REMARK 3 L33: 0.1842 L12: 0.1789 REMARK 3 L13: 0.0412 L23: 0.3098 REMARK 3 S TENSOR REMARK 3 S11: -0.0410 S12: -0.0054 S13: 0.1523 REMARK 3 S21: -0.0441 S22: -0.0002 S23: 0.0992 REMARK 3 S31: -0.1397 S32: 0.0020 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 302 THROUGH 347 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.3172 26.5764 56.5198 REMARK 3 T TENSOR REMARK 3 T11: 0.6345 T22: 0.4810 REMARK 3 T33: 0.6092 T12: 0.0140 REMARK 3 T13: -0.0001 T23: 0.1006 REMARK 3 L TENSOR REMARK 3 L11: 0.5581 L22: 0.3543 REMARK 3 L33: 0.1199 L12: 0.3476 REMARK 3 L13: 0.1221 L23: -0.0361 REMARK 3 S TENSOR REMARK 3 S11: 0.1213 S12: -0.1109 S13: 0.1873 REMARK 3 S21: 0.0314 S22: 0.0521 S23: -0.0446 REMARK 3 S31: -0.3567 S32: 0.3331 S33: 0.0003 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 348 THROUGH 385 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.5526 32.2812 50.4061 REMARK 3 T TENSOR REMARK 3 T11: 0.6859 T22: 0.4263 REMARK 3 T33: 0.4744 T12: -0.0368 REMARK 3 T13: 0.0839 T23: 0.0832 REMARK 3 L TENSOR REMARK 3 L11: 0.4571 L22: 0.1951 REMARK 3 L33: 0.3156 L12: -0.2637 REMARK 3 L13: -0.0784 L23: -0.0674 REMARK 3 S TENSOR REMARK 3 S11: 0.2998 S12: -0.2332 S13: 0.4512 REMARK 3 S21: -0.1639 S22: -0.0291 S23: -0.0343 REMARK 3 S31: -0.7774 S32: 0.3779 S33: 0.0069 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6B21 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-SEP-17. REMARK 100 THE DEPOSITION ID IS D_1000230154. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21583 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 56.219 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 4.547 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.7200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.51 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.17 REMARK 200 R MERGE FOR SHELL (I) : 0.49000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.850 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1U7G REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS, PH 8.0 0.3M MG-NITRATE 22% REMARK 280 (W/V) PEG 8000, VAPOR DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 69.39000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 40.06234 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 53.04667 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 69.39000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 40.06234 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 53.04667 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 69.39000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 40.06234 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 53.04667 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 69.39000 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 40.06234 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 53.04667 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 69.39000 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 40.06234 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 53.04667 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 69.39000 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 40.06234 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 53.04667 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 80.12467 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 106.09333 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 80.12467 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 106.09333 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 80.12467 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 106.09333 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 80.12467 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 106.09333 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 80.12467 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 106.09333 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 80.12467 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 106.09333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -141.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 184 REMARK 465 ARG A 185 REMARK 465 VAL A 186 REMARK 465 GLY A 187 REMARK 465 PHE A 188 REMARK 465 GLY A 189 REMARK 465 LYS A 190 REMARK 465 GLU A 191 REMARK 465 ALA A 192 REMARK 465 PHE A 193 REMARK 465 LEU A 305 REMARK 465 LEU A 306 REMARK 465 ARG A 307 REMARK 465 VAL A 308 REMARK 465 ASP A 309 REMARK 465 ASP A 310 REMARK 465 PRO A 386 REMARK 465 GLU A 387 REMARK 465 GLU A 388 REMARK 465 GLN A 389 REMARK 465 GLU A 390 REMARK 465 ARG A 391 REMARK 465 GLU A 392 REMARK 465 GLY A 393 REMARK 465 LEU A 394 REMARK 465 ASP A 395 REMARK 465 VAL A 396 REMARK 465 ASN A 397 REMARK 465 SER A 398 REMARK 465 HIS A 399 REMARK 465 GLY A 400 REMARK 465 GLU A 401 REMARK 465 ASN A 402 REMARK 465 ALA A 403 REMARK 465 TYR A 404 REMARK 465 ASN A 405 REMARK 465 ALA A 406 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 37 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 84 CG CD CE NZ REMARK 470 LYS A 194 CG CD CE NZ REMARK 470 MET A 301 CG SD CE REMARK 470 LEU A 302 CG CD1 CD2 REMARK 470 LYS A 303 CG CD CE NZ REMARK 470 ARG A 304 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 384 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 62 -16.67 -147.28 REMARK 500 ASN A 72 -155.35 -120.61 REMARK 500 SER A 139 -59.66 -122.64 REMARK 500 VAL A 167 -60.96 -105.66 REMARK 500 ASN A 224 -164.35 -118.15 REMARK 500 LYS A 303 30.56 -90.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C9V A 501 DBREF 6B21 A 4 406 UNP P69681 AMTB_ECOLI 26 428 SEQADV 6B21 GLY A 1 UNP P69681 EXPRESSION TAG SEQADV 6B21 ALA A 2 UNP P69681 EXPRESSION TAG SEQADV 6B21 SER A 3 UNP P69681 EXPRESSION TAG SEQRES 1 A 406 GLY ALA SER VAL ALA ASP LYS ALA ASP ASN ALA PHE MET SEQRES 2 A 406 MET ILE CYS THR ALA LEU VAL LEU PHE MET THR ILE PRO SEQRES 3 A 406 GLY ILE ALA LEU PHE TYR GLY GLY LEU ILE ARG GLY LYS SEQRES 4 A 406 ASN VAL LEU SER MET LEU THR GLN VAL THR VAL THR PHE SEQRES 5 A 406 ALA LEU VAL CYS ILE LEU TRP VAL VAL TYR GLY TYR SER SEQRES 6 A 406 LEU ALA PHE GLY GLU GLY ASN ASN PHE PHE GLY ASN ILE SEQRES 7 A 406 ASN TRP LEU MET LEU LYS ASN ILE GLU LEU THR ALA VAL SEQRES 8 A 406 MET GLY SER ILE TYR GLN TYR ILE HIS VAL ALA PHE GLN SEQRES 9 A 406 GLY SER PHE ALA CYS ILE THR VAL GLY LEU ILE VAL GLY SEQRES 10 A 406 ALA LEU ALA GLU ARG ILE ARG PHE SER ALA VAL LEU ILE SEQRES 11 A 406 PHE VAL VAL VAL TRP LEU THR LEU SER TYR ILE PRO ILE SEQRES 12 A 406 ALA HIS MET VAL TRP GLY GLY GLY LEU LEU ALA SER HIS SEQRES 13 A 406 GLY ALA LEU ASP PHE ALA GLY GLY THR VAL VAL HIS ILE SEQRES 14 A 406 ASN ALA ALA ILE ALA GLY LEU VAL GLY ALA TYR LEU ILE SEQRES 15 A 406 GLY LYS ARG VAL GLY PHE GLY LYS GLU ALA PHE LYS PRO SEQRES 16 A 406 HIS ASN LEU PRO MET VAL PHE THR GLY THR ALA ILE LEU SEQRES 17 A 406 TYR ILE GLY TRP PHE GLY PHE ASN ALA GLY SER ALA GLY SEQRES 18 A 406 THR ALA ASN GLU ILE ALA ALA LEU ALA PHE VAL ASN THR SEQRES 19 A 406 VAL VAL ALA THR ALA ALA ALA ILE LEU GLY TRP ILE PHE SEQRES 20 A 406 GLY GLU TRP ALA LEU ARG GLY LYS PRO SER LEU LEU GLY SEQRES 21 A 406 ALA CYS SER GLY ALA ILE ALA GLY LEU VAL GLY VAL THR SEQRES 22 A 406 PRO ALA CYS GLY TYR ILE GLY VAL GLY GLY ALA LEU ILE SEQRES 23 A 406 ILE GLY VAL VAL ALA GLY LEU ALA GLY LEU TRP GLY VAL SEQRES 24 A 406 THR MET LEU LYS ARG LEU LEU ARG VAL ASP ASP PRO CYS SEQRES 25 A 406 ASP VAL PHE GLY VAL HIS GLY VAL CYS GLY ILE VAL GLY SEQRES 26 A 406 CYS ILE MET THR GLY ILE PHE ALA ALA SER SER LEU GLY SEQRES 27 A 406 GLY VAL GLY PHE ALA GLU GLY VAL THR MET GLY HIS GLN SEQRES 28 A 406 LEU LEU VAL GLN LEU GLU SER ILE ALA ILE THR ILE VAL SEQRES 29 A 406 TRP SER GLY VAL VAL ALA PHE ILE GLY TYR LYS LEU ALA SEQRES 30 A 406 ASP LEU THR VAL GLY LEU ARG VAL PRO GLU GLU GLN GLU SEQRES 31 A 406 ARG GLU GLY LEU ASP VAL ASN SER HIS GLY GLU ASN ALA SEQRES 32 A 406 TYR ASN ALA HET C9V A 501 107 HETNAM C9V [(2R,5R,11R,14S,24E)-14-[(ACETYLOXY)METHYL]-8-{[5-(3,5- HETNAM 2 C9V DIMETHYL-1H-PYRROL-2-YL-KAPPAN)-5-(3,5-DIMETHYL-2H- HETNAM 3 C9V PYRROL-2-YLIDENE-KAPPAN)PENTANOYL]OXY}-5,11-DIHYDROXY- HETNAM 4 C9V 2-{[(9E)-OCTADEC-9-ENOYL]OXY}-5,11,16-TRIOXO-4,6,10, HETNAM 5 C9V 12,15-PENTAOXA-5LAMBDA~5~,11LAMBDA~5~- HETNAM 6 C9V DIPHOSPHATRITRIACONT-24-EN-1-YL (9E)-OCTADEC-9- HETNAM 7 C9V ENOATATO](DIFLUORO)BORON FORMUL 2 C9V C82 H139 B F2 N2 O18 P2 FORMUL 3 HOH *77(H2 O) HELIX 1 AA1 ASP A 6 ILE A 25 1 20 HELIX 2 AA2 PRO A 26 ILE A 36 1 11 HELIX 3 AA3 ASN A 40 TYR A 62 1 23 HELIX 4 AA4 TYR A 62 GLY A 69 1 8 HELIX 5 AA5 TRP A 80 LYS A 84 5 5 HELIX 6 AA6 GLN A 97 ALA A 120 1 24 HELIX 7 AA7 ARG A 124 SER A 139 1 16 HELIX 8 AA8 SER A 139 TRP A 148 1 10 HELIX 9 AA9 GLY A 151 HIS A 156 1 6 HELIX 10 AB1 VAL A 167 ILE A 182 1 16 HELIX 11 AB2 ASN A 197 SER A 219 1 23 HELIX 12 AB3 ASN A 224 ARG A 253 1 30 HELIX 13 AB4 SER A 257 THR A 273 1 17 HELIX 14 AB5 GLY A 280 LEU A 302 1 23 HELIX 15 AB6 ASP A 313 ALA A 333 1 21 HELIX 16 AB7 ALA A 334 GLY A 338 5 5 HELIX 17 AB8 THR A 347 VAL A 381 1 35 SHEET 1 AA1 2 VAL A 91 MET A 92 0 SHEET 2 AA1 2 ILE A 95 TYR A 96 -1 O ILE A 95 N MET A 92 CISPEP 1 ILE A 25 PRO A 26 0 2.36 CISPEP 2 GLU A 70 GLY A 71 0 -3.05 SITE 1 AC1 14 ASN A 72 ASN A 73 PHE A 74 SER A 155 SITE 2 AC1 14 HIS A 156 ILE A 173 VAL A 177 TYR A 180 SITE 3 AC1 14 LEU A 353 GLU A 357 ILE A 363 VAL A 364 SITE 4 AC1 14 PHE A 371 HOH A 603 CRYST1 138.780 138.780 159.140 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007206 0.004160 0.000000 0.00000 SCALE2 0.000000 0.008320 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006284 0.00000