data_6B5D # _entry.id 6B5D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.321 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6B5D WWPDB D_1000230307 # _pdbx_database_related.db_name PDB _pdbx_database_related.details 'Katanin ortholog' _pdbx_database_related.db_id 6B5C _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6B5D _pdbx_database_status.recvd_initial_deposition_date 2017-09-29 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Nithianantham, S.' 1 ? 'Al-Bassam, J.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J. Biol. Chem.' _citation.journal_id_ASTM JBCHA3 _citation.journal_id_CSD 0071 _citation.journal_id_ISSN 1083-351X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 293 _citation.language ? _citation.page_first 10590 _citation.page_last 10605 _citation.title 'Structural basis for disassembly of katanin heterododecamers.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1074/jbc.RA117.001215 _citation.pdbx_database_id_PubMed 29752405 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nithianantham, S.' 1 ? primary 'McNally, F.J.' 2 ? primary 'Al-Bassam, J.' 3 ? # _cell.length_a 98.830 _cell.length_b 98.830 _cell.length_c 75.080 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 6B5D _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.space_group_name_H-M 'P 65' _symmetry.entry_id 6B5D _symmetry.Int_Tables_number 170 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Meiotic spindle formation protein mei-1' 34667.941 1 3.6.4.3 ? ? ? 2 non-polymer syn "ADENOSINE-5'-DIPHOSPHATE" 427.201 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Katanin p60 ATPase-containing subunit A1,Katanin p60 subunit A1,p60 katanin' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SFDASAYDAYIVQAVRGT(MSE)ATNTENT(MSE)SLDDIIG(MSE)HDVKQVLHEAVTLPLLVPEFFQGLRSPWKA (MSE)VLAGPPGTGKTLIARAIASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQRGNS GEHEASRRVKSEFLVQ(MSE)DGSQNKFDSRRVFVLAATNIPWELDEALRRRFEKRIFIPLPDIDARKKLIEKS(MSE)E GTPKSDEINYDDLAARTEGFSGADVVSLCRTAAINVLRRYDTKSLRGGELTAA(MSE)ESLKAELVRNIDFEAALQAVSP SAGPDT(MSE)LKCKEWCDSFGA(MSE) ; _entity_poly.pdbx_seq_one_letter_code_can ;SFDASAYDAYIVQAVRGTMATNTENTMSLDDIIGMHDVKQVLHEAVTLPLLVPEFFQGLRSPWKAMVLAGPPGTGKTLIA RAIASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQRGNSGEHEASRRVKSEFLVQMDG SQNKFDSRRVFVLAATNIPWELDEALRRRFEKRIFIPLPDIDARKKLIEKSMEGTPKSDEINYDDLAARTEGFSGADVVS LCRTAAINVLRRYDTKSLRGGELTAAMESLKAELVRNIDFEAALQAVSPSAGPDTMLKCKEWCDSFGAM ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 PHE n 1 3 ASP n 1 4 ALA n 1 5 SER n 1 6 ALA n 1 7 TYR n 1 8 ASP n 1 9 ALA n 1 10 TYR n 1 11 ILE n 1 12 VAL n 1 13 GLN n 1 14 ALA n 1 15 VAL n 1 16 ARG n 1 17 GLY n 1 18 THR n 1 19 MSE n 1 20 ALA n 1 21 THR n 1 22 ASN n 1 23 THR n 1 24 GLU n 1 25 ASN n 1 26 THR n 1 27 MSE n 1 28 SER n 1 29 LEU n 1 30 ASP n 1 31 ASP n 1 32 ILE n 1 33 ILE n 1 34 GLY n 1 35 MSE n 1 36 HIS n 1 37 ASP n 1 38 VAL n 1 39 LYS n 1 40 GLN n 1 41 VAL n 1 42 LEU n 1 43 HIS n 1 44 GLU n 1 45 ALA n 1 46 VAL n 1 47 THR n 1 48 LEU n 1 49 PRO n 1 50 LEU n 1 51 LEU n 1 52 VAL n 1 53 PRO n 1 54 GLU n 1 55 PHE n 1 56 PHE n 1 57 GLN n 1 58 GLY n 1 59 LEU n 1 60 ARG n 1 61 SER n 1 62 PRO n 1 63 TRP n 1 64 LYS n 1 65 ALA n 1 66 MSE n 1 67 VAL n 1 68 LEU n 1 69 ALA n 1 70 GLY n 1 71 PRO n 1 72 PRO n 1 73 GLY n 1 74 THR n 1 75 GLY n 1 76 LYS n 1 77 THR n 1 78 LEU n 1 79 ILE n 1 80 ALA n 1 81 ARG n 1 82 ALA n 1 83 ILE n 1 84 ALA n 1 85 SER n 1 86 GLU n 1 87 SER n 1 88 SER n 1 89 SER n 1 90 THR n 1 91 PHE n 1 92 PHE n 1 93 THR n 1 94 VAL n 1 95 SER n 1 96 SER n 1 97 THR n 1 98 ASP n 1 99 LEU n 1 100 SER n 1 101 SER n 1 102 LYS n 1 103 TRP n 1 104 ARG n 1 105 GLY n 1 106 ASP n 1 107 SER n 1 108 GLU n 1 109 LYS n 1 110 ILE n 1 111 VAL n 1 112 ARG n 1 113 LEU n 1 114 LEU n 1 115 PHE n 1 116 GLU n 1 117 LEU n 1 118 ALA n 1 119 ARG n 1 120 PHE n 1 121 TYR n 1 122 ALA n 1 123 PRO n 1 124 SER n 1 125 ILE n 1 126 ILE n 1 127 PHE n 1 128 ILE n 1 129 ASP n 1 130 GLU n 1 131 ILE n 1 132 ASP n 1 133 THR n 1 134 LEU n 1 135 GLY n 1 136 GLY n 1 137 GLN n 1 138 ARG n 1 139 GLY n 1 140 ASN n 1 141 SER n 1 142 GLY n 1 143 GLU n 1 144 HIS n 1 145 GLU n 1 146 ALA n 1 147 SER n 1 148 ARG n 1 149 ARG n 1 150 VAL n 1 151 LYS n 1 152 SER n 1 153 GLU n 1 154 PHE n 1 155 LEU n 1 156 VAL n 1 157 GLN n 1 158 MSE n 1 159 ASP n 1 160 GLY n 1 161 SER n 1 162 GLN n 1 163 ASN n 1 164 LYS n 1 165 PHE n 1 166 ASP n 1 167 SER n 1 168 ARG n 1 169 ARG n 1 170 VAL n 1 171 PHE n 1 172 VAL n 1 173 LEU n 1 174 ALA n 1 175 ALA n 1 176 THR n 1 177 ASN n 1 178 ILE n 1 179 PRO n 1 180 TRP n 1 181 GLU n 1 182 LEU n 1 183 ASP n 1 184 GLU n 1 185 ALA n 1 186 LEU n 1 187 ARG n 1 188 ARG n 1 189 ARG n 1 190 PHE n 1 191 GLU n 1 192 LYS n 1 193 ARG n 1 194 ILE n 1 195 PHE n 1 196 ILE n 1 197 PRO n 1 198 LEU n 1 199 PRO n 1 200 ASP n 1 201 ILE n 1 202 ASP n 1 203 ALA n 1 204 ARG n 1 205 LYS n 1 206 LYS n 1 207 LEU n 1 208 ILE n 1 209 GLU n 1 210 LYS n 1 211 SER n 1 212 MSE n 1 213 GLU n 1 214 GLY n 1 215 THR n 1 216 PRO n 1 217 LYS n 1 218 SER n 1 219 ASP n 1 220 GLU n 1 221 ILE n 1 222 ASN n 1 223 TYR n 1 224 ASP n 1 225 ASP n 1 226 LEU n 1 227 ALA n 1 228 ALA n 1 229 ARG n 1 230 THR n 1 231 GLU n 1 232 GLY n 1 233 PHE n 1 234 SER n 1 235 GLY n 1 236 ALA n 1 237 ASP n 1 238 VAL n 1 239 VAL n 1 240 SER n 1 241 LEU n 1 242 CYS n 1 243 ARG n 1 244 THR n 1 245 ALA n 1 246 ALA n 1 247 ILE n 1 248 ASN n 1 249 VAL n 1 250 LEU n 1 251 ARG n 1 252 ARG n 1 253 TYR n 1 254 ASP n 1 255 THR n 1 256 LYS n 1 257 SER n 1 258 LEU n 1 259 ARG n 1 260 GLY n 1 261 GLY n 1 262 GLU n 1 263 LEU n 1 264 THR n 1 265 ALA n 1 266 ALA n 1 267 MSE n 1 268 GLU n 1 269 SER n 1 270 LEU n 1 271 LYS n 1 272 ALA n 1 273 GLU n 1 274 LEU n 1 275 VAL n 1 276 ARG n 1 277 ASN n 1 278 ILE n 1 279 ASP n 1 280 PHE n 1 281 GLU n 1 282 ALA n 1 283 ALA n 1 284 LEU n 1 285 GLN n 1 286 ALA n 1 287 VAL n 1 288 SER n 1 289 PRO n 1 290 SER n 1 291 ALA n 1 292 GLY n 1 293 PRO n 1 294 ASP n 1 295 THR n 1 296 MSE n 1 297 LEU n 1 298 LYS n 1 299 CYS n 1 300 LYS n 1 301 GLU n 1 302 TRP n 1 303 CYS n 1 304 ASP n 1 305 SER n 1 306 PHE n 1 307 GLY n 1 308 ALA n 1 309 MSE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 309 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'mei-1, T01G9.5' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Caenorhabditis elegans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 6239 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code KTNA1_CAEEL _struct_ref.pdbx_db_accession P34808 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SFDASAYDAYIVQAVRGTMATNTENTMSLDDIIGMHDVKQVLHEAVTLPLLVPEFFQGLRSPWKAMVLAGPPGTGKTLIA RAIASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQRGNSGEHEASRRVKSEFLVQMDG SQNKFDSRRVFVLAATNIPWELDEALRRRFEKRIFIPLPDIDARKKLIEKSMEGTPKSDEINYDDLAARTEGFSGADVVS LCRTAAINVLRRYDTKSLRGGELTAAMESLKAELVRNIDFEAALQAVSPSAGPDTMLKCKEWCDSFGA ; _struct_ref.pdbx_align_begin 164 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6B5D _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 308 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P34808 _struct_ref_seq.db_align_beg 164 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 471 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 164 _struct_ref_seq.pdbx_auth_seq_align_end 471 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 6B5D _struct_ref_seq_dif.mon_id MSE _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 309 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P34808 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 472 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ADP non-polymer n "ADENOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O10 P2' 427.201 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6B5D _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.05 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 59.71 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.1 M HEPES pH 7.5 and 0.7 M Sodium potassium tartrate ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-03-28 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Cryo-Cooled double crystal' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9791 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9791 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_synchrotron_site APS # _reflns.entry_id 6B5D _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 85.589 _reflns.d_resolution_high 3.100 _reflns.number_obs 7653 _reflns.number_all 7653 _reflns.percent_possible_obs 99.600 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.076 _reflns.pdbx_netI_over_sigmaI 13.000 _reflns.B_iso_Wilson_estimate 85.700 _reflns.pdbx_redundancy 4.900 _reflns.pdbx_Rrim_I_all 0.112 _reflns.pdbx_Rpim_I_all 0.049 _reflns.pdbx_CC_half ? _reflns.pdbx_netI_over_av_sigmaI 8.900 _reflns.pdbx_number_measured_all 37571 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_chi_squared ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.details ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_CC_half 1 1 3.100 3.270 ? 5592 1118 ? 0.624 1.200 0.624 ? 5.000 ? 2.400 ? ? ? ? ? ? 100.000 0.778 0.341 ? 1 2 3.270 3.470 ? 4502 1036 ? 0.400 1.800 0.400 ? 4.300 ? 3.400 ? ? ? ? ? ? 99.500 0.513 0.237 ? 1 3 3.470 3.710 ? 5018 973 ? 0.207 3.500 0.207 ? 5.200 ? 6.400 ? ? ? ? ? ? 99.800 0.264 0.114 ? 1 4 3.710 4.000 ? 4909 941 ? 0.132 5.500 0.132 ? 5.200 ? 9.800 ? ? ? ? ? ? 99.700 0.169 0.072 ? 1 5 4.000 4.380 ? 4197 855 ? 0.080 8.800 0.080 ? 4.900 ? 14.800 ? ? ? ? ? ? 100.000 0.105 0.046 ? 1 6 4.380 4.900 ? 3607 763 ? 0.054 12.700 0.054 ? 4.700 ? 18.800 ? ? ? ? ? ? 99.500 0.077 0.034 ? 1 7 4.900 5.660 ? 3647 690 ? 0.058 11.700 0.058 ? 5.300 ? 19.600 ? ? ? ? ? ? 100.000 0.087 0.037 ? 1 8 5.660 6.930 ? 2549 566 ? 0.068 9.500 0.068 ? 4.500 ? 18.700 ? ? ? ? ? ? 98.000 0.105 0.048 ? 1 9 6.930 9.800 ? 2358 454 ? 0.029 20.900 0.029 ? 5.200 ? 34.700 ? ? ? ? ? ? 100.000 0.058 0.025 ? 1 10 9.800 56.442 ? 1192 257 ? 0.018 31.700 0.018 ? 4.600 ? 41.100 ? ? ? ? ? ? 97.700 0.054 0.025 ? # _refine.entry_id 6B5D _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 3.1000 _refine.ls_d_res_low 56.4420 _refine.pdbx_ls_sigma_F 1.390 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.5700 _refine.ls_number_reflns_obs 7635 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details 'Random selection' _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2106 _refine.ls_R_factor_R_work 0.2083 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2546 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_number_reflns_R_free 382 _refine.ls_number_reflns_R_work 7253 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 99.2003 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.5000 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 254.240 _refine.B_iso_min 39.380 _refine.pdbx_overall_phase_error 29.9800 _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_R_factor_R_free_error_details ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 3.1000 _refine_hist.d_res_low 56.4420 _refine_hist.pdbx_number_atoms_ligand 27 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2229 _refine_hist.pdbx_number_residues_total 286 _refine_hist.pdbx_B_iso_mean_ligand 86.36 _refine_hist.pdbx_number_atoms_protein 2202 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' f_bond_d 2264 0.003 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 3063 0.729 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 358 0.055 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 388 0.004 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 1387 14.125 ? ? ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id 3.1000 3.5486 3 100.0000 2399 . 0.2582 0.3481 . 127 0.0000 2526 . 'X-RAY DIFFRACTION' 3.5486 4.4705 3 100.0000 2421 . 0.2067 0.2716 . 121 0.0000 2542 . 'X-RAY DIFFRACTION' 4.4705 56.4509 3 99.0000 2433 . 0.1949 0.2202 . 134 0.0000 2567 . 'X-RAY DIFFRACTION' # _struct.entry_id 6B5D _struct.title 'Structural Basis for Katanin Self-Assembly' _struct.pdbx_descriptor 'Meiotic spindle formation protein mei-1 (E.C.3.6.4.3)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6B5D _struct_keywords.text 'Katanin, AAA ATPase, Microtubule severing protein, Meiotic spindle formation protein mei-1, CELL CYCLE' _struct_keywords.pdbx_keywords 'CELL CYCLE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ILE A 11 ? THR A 18 ? ILE A 174 THR A 181 1 ? 8 HELX_P HELX_P2 AA2 SER A 28 ? ILE A 32 ? SER A 191 ILE A 195 5 ? 5 HELX_P HELX_P3 AA3 MSE A 35 ? VAL A 46 ? MSE A 198 VAL A 209 1 ? 12 HELX_P HELX_P4 AA4 VAL A 46 ? VAL A 52 ? VAL A 209 VAL A 215 1 ? 7 HELX_P HELX_P5 AA5 GLN A 57 ? SER A 61 ? GLN A 220 SER A 224 5 ? 5 HELX_P HELX_P6 AA6 GLY A 75 ? SER A 87 ? GLY A 238 SER A 250 1 ? 13 HELX_P HELX_P7 AA7 SER A 96 ? LYS A 102 ? SER A 259 LYS A 265 1 ? 7 HELX_P HELX_P8 AA8 GLU A 108 ? TYR A 121 ? GLU A 271 TYR A 284 1 ? 14 HELX_P HELX_P9 AA9 ILE A 131 ? LEU A 134 ? ILE A 294 LEU A 297 5 ? 4 HELX_P HELX_P10 AB1 SER A 147 ? SER A 152 ? SER A 310 SER A 315 1 ? 6 HELX_P HELX_P11 AB2 SER A 152 ? GLN A 162 ? SER A 315 GLN A 325 1 ? 11 HELX_P HELX_P12 AB3 ASP A 183 ? PHE A 190 ? ASP A 346 PHE A 353 1 ? 8 HELX_P HELX_P13 AB4 ASP A 200 ? MSE A 212 ? ASP A 363 MSE A 375 1 ? 13 HELX_P HELX_P14 AB5 ASN A 222 ? THR A 230 ? ASN A 385 THR A 393 1 ? 9 HELX_P HELX_P15 AB6 SER A 234 ? ARG A 252 ? SER A 397 ARG A 415 1 ? 19 HELX_P HELX_P16 AB7 THR A 255 ? ARG A 259 ? THR A 418 ARG A 422 5 ? 5 HELX_P HELX_P17 AB8 THR A 264 ? GLU A 273 ? THR A 427 GLU A 436 1 ? 10 HELX_P HELX_P18 AB9 ARG A 276 ? VAL A 287 ? ARG A 439 VAL A 450 1 ? 12 HELX_P HELX_P19 AC1 GLY A 292 ? CYS A 303 ? GLY A 455 CYS A 466 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? A THR 18 C ? ? ? 1_555 A MSE 19 N ? ? A THR 181 A MSE 182 1_555 ? ? ? ? ? ? ? 1.328 ? covale2 covale both ? A MSE 19 C ? ? ? 1_555 A ALA 20 N ? ? A MSE 182 A ALA 183 1_555 ? ? ? ? ? ? ? 1.330 ? covale3 covale both ? A THR 26 C ? ? ? 1_555 A MSE 27 N ? ? A THR 189 A MSE 190 1_555 ? ? ? ? ? ? ? 1.329 ? covale4 covale both ? A MSE 27 C ? ? ? 1_555 A SER 28 N ? ? A MSE 190 A SER 191 1_555 ? ? ? ? ? ? ? 1.331 ? covale5 covale both ? A GLY 34 C ? ? ? 1_555 A MSE 35 N ? ? A GLY 197 A MSE 198 1_555 ? ? ? ? ? ? ? 1.333 ? covale6 covale both ? A MSE 35 C ? ? ? 1_555 A HIS 36 N ? ? A MSE 198 A HIS 199 1_555 ? ? ? ? ? ? ? 1.335 ? covale7 covale both ? A ALA 65 C ? ? ? 1_555 A MSE 66 N ? ? A ALA 228 A MSE 229 1_555 ? ? ? ? ? ? ? 1.328 ? covale8 covale both ? A MSE 66 C ? ? ? 1_555 A VAL 67 N ? ? A MSE 229 A VAL 230 1_555 ? ? ? ? ? ? ? 1.329 ? covale9 covale both ? A GLN 157 C ? ? ? 1_555 A MSE 158 N ? ? A GLN 320 A MSE 321 1_555 ? ? ? ? ? ? ? 1.328 ? covale10 covale both ? A MSE 158 C ? ? ? 1_555 A ASP 159 N ? ? A MSE 321 A ASP 322 1_555 ? ? ? ? ? ? ? 1.336 ? covale11 covale both ? A SER 211 C ? ? ? 1_555 A MSE 212 N ? ? A SER 374 A MSE 375 1_555 ? ? ? ? ? ? ? 1.330 ? covale12 covale both ? A MSE 212 C ? ? ? 1_555 A GLU 213 N ? ? A MSE 375 A GLU 376 1_555 ? ? ? ? ? ? ? 1.335 ? covale13 covale both ? A ALA 266 C ? ? ? 1_555 A MSE 267 N ? ? A ALA 429 A MSE 430 1_555 ? ? ? ? ? ? ? 1.329 ? covale14 covale both ? A MSE 267 C ? ? ? 1_555 A GLU 268 N ? ? A MSE 430 A GLU 431 1_555 ? ? ? ? ? ? ? 1.334 ? covale15 covale both ? A THR 295 C ? ? ? 1_555 A MSE 296 N ? ? A THR 458 A MSE 459 1_555 ? ? ? ? ? ? ? 1.330 ? covale16 covale both ? A MSE 296 C ? ? ? 1_555 A LEU 297 N ? ? A MSE 459 A LEU 460 1_555 ? ? ? ? ? ? ? 1.336 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 MSE A 19 ? ALA A 20 ? MSE A 182 ALA A 183 AA1 2 THR A 90 ? SER A 95 ? THR A 253 SER A 258 AA1 3 SER A 124 ? ASP A 129 ? SER A 287 ASP A 292 AA1 4 VAL A 170 ? THR A 176 ? VAL A 333 THR A 339 AA1 5 ALA A 65 ? ALA A 69 ? ALA A 228 ALA A 232 AA1 6 LYS A 192 ? PHE A 195 ? LYS A 355 PHE A 358 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ALA A 20 ? N ALA A 183 O PHE A 91 ? O PHE A 254 AA1 2 3 N PHE A 92 ? N PHE A 255 O PHE A 127 ? O PHE A 290 AA1 3 4 N ILE A 128 ? N ILE A 291 O ALA A 175 ? O ALA A 338 AA1 4 5 O ALA A 174 ? O ALA A 337 N LEU A 68 ? N LEU A 231 AA1 5 6 N ALA A 69 ? N ALA A 232 O ILE A 194 ? O ILE A 357 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id ADP _struct_site.pdbx_auth_seq_id 501 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 10 _struct_site.details 'binding site for residue ADP A 501' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 ILE A 32 ? ILE A 195 . ? 1_555 ? 2 AC1 10 ILE A 33 ? ILE A 196 . ? 1_555 ? 3 AC1 10 GLY A 73 ? GLY A 236 . ? 1_555 ? 4 AC1 10 THR A 74 ? THR A 237 . ? 1_555 ? 5 AC1 10 GLY A 75 ? GLY A 238 . ? 1_555 ? 6 AC1 10 LYS A 76 ? LYS A 239 . ? 1_555 ? 7 AC1 10 THR A 77 ? THR A 240 . ? 1_555 ? 8 AC1 10 LEU A 78 ? LEU A 241 . ? 1_555 ? 9 AC1 10 LEU A 207 ? LEU A 370 . ? 1_555 ? 10 AC1 10 GLY A 235 ? GLY A 398 . ? 1_555 ? # _atom_sites.entry_id 6B5D _atom_sites.fract_transf_matrix[1][1] 0.010118 _atom_sites.fract_transf_matrix[1][2] 0.005842 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011684 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013319 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 164 164 SER SER A . n A 1 2 PHE 2 165 165 PHE PHE A . n A 1 3 ASP 3 166 166 ASP ASP A . n A 1 4 ALA 4 167 167 ALA ALA A . n A 1 5 SER 5 168 168 SER SER A . n A 1 6 ALA 6 169 169 ALA ALA A . n A 1 7 TYR 7 170 170 TYR TYR A . n A 1 8 ASP 8 171 171 ASP ASP A . n A 1 9 ALA 9 172 172 ALA ALA A . n A 1 10 TYR 10 173 173 TYR TYR A . n A 1 11 ILE 11 174 174 ILE ILE A . n A 1 12 VAL 12 175 175 VAL VAL A . n A 1 13 GLN 13 176 176 GLN GLN A . n A 1 14 ALA 14 177 177 ALA ALA A . n A 1 15 VAL 15 178 178 VAL VAL A . n A 1 16 ARG 16 179 179 ARG ARG A . n A 1 17 GLY 17 180 180 GLY GLY A . n A 1 18 THR 18 181 181 THR THR A . n A 1 19 MSE 19 182 182 MSE MSE A . n A 1 20 ALA 20 183 183 ALA ALA A . n A 1 21 THR 21 184 184 THR THR A . n A 1 22 ASN 22 185 185 ASN ASN A . n A 1 23 THR 23 186 186 THR THR A . n A 1 24 GLU 24 187 187 GLU GLU A . n A 1 25 ASN 25 188 188 ASN ASN A . n A 1 26 THR 26 189 189 THR THR A . n A 1 27 MSE 27 190 190 MSE MSE A . n A 1 28 SER 28 191 191 SER SER A . n A 1 29 LEU 29 192 192 LEU LEU A . n A 1 30 ASP 30 193 193 ASP ASP A . n A 1 31 ASP 31 194 194 ASP ASP A . n A 1 32 ILE 32 195 195 ILE ILE A . n A 1 33 ILE 33 196 196 ILE ILE A . n A 1 34 GLY 34 197 197 GLY GLY A . n A 1 35 MSE 35 198 198 MSE MSE A . n A 1 36 HIS 36 199 199 HIS HIS A . n A 1 37 ASP 37 200 200 ASP ASP A . n A 1 38 VAL 38 201 201 VAL VAL A . n A 1 39 LYS 39 202 202 LYS LYS A . n A 1 40 GLN 40 203 203 GLN GLN A . n A 1 41 VAL 41 204 204 VAL VAL A . n A 1 42 LEU 42 205 205 LEU LEU A . n A 1 43 HIS 43 206 206 HIS HIS A . n A 1 44 GLU 44 207 207 GLU GLU A . n A 1 45 ALA 45 208 208 ALA ALA A . n A 1 46 VAL 46 209 209 VAL VAL A . n A 1 47 THR 47 210 210 THR THR A . n A 1 48 LEU 48 211 211 LEU LEU A . n A 1 49 PRO 49 212 212 PRO PRO A . n A 1 50 LEU 50 213 213 LEU LEU A . n A 1 51 LEU 51 214 214 LEU LEU A . n A 1 52 VAL 52 215 215 VAL VAL A . n A 1 53 PRO 53 216 216 PRO PRO A . n A 1 54 GLU 54 217 217 GLU GLU A . n A 1 55 PHE 55 218 218 PHE PHE A . n A 1 56 PHE 56 219 219 PHE PHE A . n A 1 57 GLN 57 220 220 GLN GLN A . n A 1 58 GLY 58 221 221 GLY GLY A . n A 1 59 LEU 59 222 222 LEU LEU A . n A 1 60 ARG 60 223 223 ARG ARG A . n A 1 61 SER 61 224 224 SER SER A . n A 1 62 PRO 62 225 225 PRO PRO A . n A 1 63 TRP 63 226 226 TRP TRP A . n A 1 64 LYS 64 227 227 LYS LYS A . n A 1 65 ALA 65 228 228 ALA ALA A . n A 1 66 MSE 66 229 229 MSE MSE A . n A 1 67 VAL 67 230 230 VAL VAL A . n A 1 68 LEU 68 231 231 LEU LEU A . n A 1 69 ALA 69 232 232 ALA ALA A . n A 1 70 GLY 70 233 233 GLY GLY A . n A 1 71 PRO 71 234 234 PRO PRO A . n A 1 72 PRO 72 235 235 PRO PRO A . n A 1 73 GLY 73 236 236 GLY GLY A . n A 1 74 THR 74 237 237 THR THR A . n A 1 75 GLY 75 238 238 GLY GLY A . n A 1 76 LYS 76 239 239 LYS LYS A . n A 1 77 THR 77 240 240 THR THR A . n A 1 78 LEU 78 241 241 LEU LEU A . n A 1 79 ILE 79 242 242 ILE ILE A . n A 1 80 ALA 80 243 243 ALA ALA A . n A 1 81 ARG 81 244 244 ARG ARG A . n A 1 82 ALA 82 245 245 ALA ALA A . n A 1 83 ILE 83 246 246 ILE ILE A . n A 1 84 ALA 84 247 247 ALA ALA A . n A 1 85 SER 85 248 248 SER SER A . n A 1 86 GLU 86 249 249 GLU GLU A . n A 1 87 SER 87 250 250 SER SER A . n A 1 88 SER 88 251 251 SER SER A . n A 1 89 SER 89 252 252 SER SER A . n A 1 90 THR 90 253 253 THR THR A . n A 1 91 PHE 91 254 254 PHE PHE A . n A 1 92 PHE 92 255 255 PHE PHE A . n A 1 93 THR 93 256 256 THR THR A . n A 1 94 VAL 94 257 257 VAL VAL A . n A 1 95 SER 95 258 258 SER SER A . n A 1 96 SER 96 259 259 SER SER A . n A 1 97 THR 97 260 260 THR THR A . n A 1 98 ASP 98 261 261 ASP ASP A . n A 1 99 LEU 99 262 262 LEU LEU A . n A 1 100 SER 100 263 263 SER SER A . n A 1 101 SER 101 264 264 SER SER A . n A 1 102 LYS 102 265 265 LYS LYS A . n A 1 103 TRP 103 266 ? ? ? A . n A 1 104 ARG 104 267 ? ? ? A . n A 1 105 GLY 105 268 ? ? ? A . n A 1 106 ASP 106 269 ? ? ? A . n A 1 107 SER 107 270 270 SER SER A . n A 1 108 GLU 108 271 271 GLU GLU A . n A 1 109 LYS 109 272 272 LYS LYS A . n A 1 110 ILE 110 273 273 ILE ILE A . n A 1 111 VAL 111 274 274 VAL VAL A . n A 1 112 ARG 112 275 275 ARG ARG A . n A 1 113 LEU 113 276 276 LEU LEU A . n A 1 114 LEU 114 277 277 LEU LEU A . n A 1 115 PHE 115 278 278 PHE PHE A . n A 1 116 GLU 116 279 279 GLU GLU A . n A 1 117 LEU 117 280 280 LEU LEU A . n A 1 118 ALA 118 281 281 ALA ALA A . n A 1 119 ARG 119 282 282 ARG ARG A . n A 1 120 PHE 120 283 283 PHE PHE A . n A 1 121 TYR 121 284 284 TYR TYR A . n A 1 122 ALA 122 285 285 ALA ALA A . n A 1 123 PRO 123 286 286 PRO PRO A . n A 1 124 SER 124 287 287 SER SER A . n A 1 125 ILE 125 288 288 ILE ILE A . n A 1 126 ILE 126 289 289 ILE ILE A . n A 1 127 PHE 127 290 290 PHE PHE A . n A 1 128 ILE 128 291 291 ILE ILE A . n A 1 129 ASP 129 292 292 ASP ASP A . n A 1 130 GLU 130 293 293 GLU GLU A . n A 1 131 ILE 131 294 294 ILE ILE A . n A 1 132 ASP 132 295 295 ASP ASP A . n A 1 133 THR 133 296 296 THR THR A . n A 1 134 LEU 134 297 297 LEU LEU A . n A 1 135 GLY 135 298 298 GLY GLY A . n A 1 136 GLY 136 299 ? ? ? A . n A 1 137 GLN 137 300 ? ? ? A . n A 1 138 ARG 138 301 ? ? ? A . n A 1 139 GLY 139 302 ? ? ? A . n A 1 140 ASN 140 303 ? ? ? A . n A 1 141 SER 141 304 ? ? ? A . n A 1 142 GLY 142 305 ? ? ? A . n A 1 143 GLU 143 306 ? ? ? A . n A 1 144 HIS 144 307 ? ? ? A . n A 1 145 GLU 145 308 308 GLU GLU A . n A 1 146 ALA 146 309 309 ALA ALA A . n A 1 147 SER 147 310 310 SER SER A . n A 1 148 ARG 148 311 311 ARG ARG A . n A 1 149 ARG 149 312 312 ARG ARG A . n A 1 150 VAL 150 313 313 VAL VAL A . n A 1 151 LYS 151 314 314 LYS LYS A . n A 1 152 SER 152 315 315 SER SER A . n A 1 153 GLU 153 316 316 GLU GLU A . n A 1 154 PHE 154 317 317 PHE PHE A . n A 1 155 LEU 155 318 318 LEU LEU A . n A 1 156 VAL 156 319 319 VAL VAL A . n A 1 157 GLN 157 320 320 GLN GLN A . n A 1 158 MSE 158 321 321 MSE MSE A . n A 1 159 ASP 159 322 322 ASP ASP A . n A 1 160 GLY 160 323 323 GLY GLY A . n A 1 161 SER 161 324 324 SER SER A . n A 1 162 GLN 162 325 325 GLN GLN A . n A 1 163 ASN 163 326 ? ? ? A . n A 1 164 LYS 164 327 ? ? ? A . n A 1 165 PHE 165 328 ? ? ? A . n A 1 166 ASP 166 329 ? ? ? A . n A 1 167 SER 167 330 ? ? ? A . n A 1 168 ARG 168 331 ? ? ? A . n A 1 169 ARG 169 332 332 ARG ARG A . n A 1 170 VAL 170 333 333 VAL VAL A . n A 1 171 PHE 171 334 334 PHE PHE A . n A 1 172 VAL 172 335 335 VAL VAL A . n A 1 173 LEU 173 336 336 LEU LEU A . n A 1 174 ALA 174 337 337 ALA ALA A . n A 1 175 ALA 175 338 338 ALA ALA A . n A 1 176 THR 176 339 339 THR THR A . n A 1 177 ASN 177 340 340 ASN ASN A . n A 1 178 ILE 178 341 341 ILE ILE A . n A 1 179 PRO 179 342 342 PRO PRO A . n A 1 180 TRP 180 343 343 TRP TRP A . n A 1 181 GLU 181 344 344 GLU GLU A . n A 1 182 LEU 182 345 345 LEU LEU A . n A 1 183 ASP 183 346 346 ASP ASP A . n A 1 184 GLU 184 347 347 GLU GLU A . n A 1 185 ALA 185 348 348 ALA ALA A . n A 1 186 LEU 186 349 349 LEU LEU A . n A 1 187 ARG 187 350 350 ARG ARG A . n A 1 188 ARG 188 351 351 ARG ARG A . n A 1 189 ARG 189 352 352 ARG ARG A . n A 1 190 PHE 190 353 353 PHE PHE A . n A 1 191 GLU 191 354 354 GLU GLU A . n A 1 192 LYS 192 355 355 LYS LYS A . n A 1 193 ARG 193 356 356 ARG ARG A . n A 1 194 ILE 194 357 357 ILE ILE A . n A 1 195 PHE 195 358 358 PHE PHE A . n A 1 196 ILE 196 359 359 ILE ILE A . n A 1 197 PRO 197 360 360 PRO PRO A . n A 1 198 LEU 198 361 361 LEU LEU A . n A 1 199 PRO 199 362 362 PRO PRO A . n A 1 200 ASP 200 363 363 ASP ASP A . n A 1 201 ILE 201 364 364 ILE ILE A . n A 1 202 ASP 202 365 365 ASP ASP A . n A 1 203 ALA 203 366 366 ALA ALA A . n A 1 204 ARG 204 367 367 ARG ARG A . n A 1 205 LYS 205 368 368 LYS LYS A . n A 1 206 LYS 206 369 369 LYS LYS A . n A 1 207 LEU 207 370 370 LEU LEU A . n A 1 208 ILE 208 371 371 ILE ILE A . n A 1 209 GLU 209 372 372 GLU GLU A . n A 1 210 LYS 210 373 373 LYS LYS A . n A 1 211 SER 211 374 374 SER SER A . n A 1 212 MSE 212 375 375 MSE MSE A . n A 1 213 GLU 213 376 376 GLU GLU A . n A 1 214 GLY 214 377 377 GLY GLY A . n A 1 215 THR 215 378 378 THR THR A . n A 1 216 PRO 216 379 379 PRO PRO A . n A 1 217 LYS 217 380 380 LYS LYS A . n A 1 218 SER 218 381 381 SER SER A . n A 1 219 ASP 219 382 382 ASP ASP A . n A 1 220 GLU 220 383 383 GLU GLU A . n A 1 221 ILE 221 384 384 ILE ILE A . n A 1 222 ASN 222 385 385 ASN ASN A . n A 1 223 TYR 223 386 386 TYR TYR A . n A 1 224 ASP 224 387 387 ASP ASP A . n A 1 225 ASP 225 388 388 ASP ASP A . n A 1 226 LEU 226 389 389 LEU LEU A . n A 1 227 ALA 227 390 390 ALA ALA A . n A 1 228 ALA 228 391 391 ALA ALA A . n A 1 229 ARG 229 392 392 ARG ARG A . n A 1 230 THR 230 393 393 THR THR A . n A 1 231 GLU 231 394 394 GLU GLU A . n A 1 232 GLY 232 395 395 GLY GLY A . n A 1 233 PHE 233 396 396 PHE PHE A . n A 1 234 SER 234 397 397 SER SER A . n A 1 235 GLY 235 398 398 GLY GLY A . n A 1 236 ALA 236 399 399 ALA ALA A . n A 1 237 ASP 237 400 400 ASP ASP A . n A 1 238 VAL 238 401 401 VAL VAL A . n A 1 239 VAL 239 402 402 VAL VAL A . n A 1 240 SER 240 403 403 SER SER A . n A 1 241 LEU 241 404 404 LEU LEU A . n A 1 242 CYS 242 405 405 CYS CYS A . n A 1 243 ARG 243 406 406 ARG ARG A . n A 1 244 THR 244 407 407 THR THR A . n A 1 245 ALA 245 408 408 ALA ALA A . n A 1 246 ALA 246 409 409 ALA ALA A . n A 1 247 ILE 247 410 410 ILE ILE A . n A 1 248 ASN 248 411 411 ASN ASN A . n A 1 249 VAL 249 412 412 VAL VAL A . n A 1 250 LEU 250 413 413 LEU LEU A . n A 1 251 ARG 251 414 414 ARG ARG A . n A 1 252 ARG 252 415 415 ARG ARG A . n A 1 253 TYR 253 416 416 TYR TYR A . n A 1 254 ASP 254 417 417 ASP ASP A . n A 1 255 THR 255 418 418 THR THR A . n A 1 256 LYS 256 419 419 LYS LYS A . n A 1 257 SER 257 420 420 SER SER A . n A 1 258 LEU 258 421 421 LEU LEU A . n A 1 259 ARG 259 422 422 ARG ARG A . n A 1 260 GLY 260 423 423 GLY GLY A . n A 1 261 GLY 261 424 424 GLY GLY A . n A 1 262 GLU 262 425 425 GLU GLU A . n A 1 263 LEU 263 426 426 LEU LEU A . n A 1 264 THR 264 427 427 THR THR A . n A 1 265 ALA 265 428 428 ALA ALA A . n A 1 266 ALA 266 429 429 ALA ALA A . n A 1 267 MSE 267 430 430 MSE MSE A . n A 1 268 GLU 268 431 431 GLU GLU A . n A 1 269 SER 269 432 432 SER SER A . n A 1 270 LEU 270 433 433 LEU LEU A . n A 1 271 LYS 271 434 434 LYS LYS A . n A 1 272 ALA 272 435 435 ALA ALA A . n A 1 273 GLU 273 436 436 GLU GLU A . n A 1 274 LEU 274 437 437 LEU LEU A . n A 1 275 VAL 275 438 438 VAL VAL A . n A 1 276 ARG 276 439 439 ARG ARG A . n A 1 277 ASN 277 440 440 ASN ASN A . n A 1 278 ILE 278 441 441 ILE ILE A . n A 1 279 ASP 279 442 442 ASP ASP A . n A 1 280 PHE 280 443 443 PHE PHE A . n A 1 281 GLU 281 444 444 GLU GLU A . n A 1 282 ALA 282 445 445 ALA ALA A . n A 1 283 ALA 283 446 446 ALA ALA A . n A 1 284 LEU 284 447 447 LEU LEU A . n A 1 285 GLN 285 448 448 GLN GLN A . n A 1 286 ALA 286 449 449 ALA ALA A . n A 1 287 VAL 287 450 450 VAL VAL A . n A 1 288 SER 288 451 451 SER SER A . n A 1 289 PRO 289 452 452 PRO PRO A . n A 1 290 SER 290 453 453 SER SER A . n A 1 291 ALA 291 454 454 ALA ALA A . n A 1 292 GLY 292 455 455 GLY GLY A . n A 1 293 PRO 293 456 456 PRO PRO A . n A 1 294 ASP 294 457 457 ASP ASP A . n A 1 295 THR 295 458 458 THR THR A . n A 1 296 MSE 296 459 459 MSE MSE A . n A 1 297 LEU 297 460 460 LEU LEU A . n A 1 298 LYS 298 461 461 LYS LYS A . n A 1 299 CYS 299 462 462 CYS CYS A . n A 1 300 LYS 300 463 463 LYS LYS A . n A 1 301 GLU 301 464 464 GLU GLU A . n A 1 302 TRP 302 465 465 TRP TRP A . n A 1 303 CYS 303 466 466 CYS CYS A . n A 1 304 ASP 304 467 467 ASP ASP A . n A 1 305 SER 305 468 468 SER SER A . n A 1 306 PHE 306 469 ? ? ? A . n A 1 307 GLY 307 470 ? ? ? A . n A 1 308 ALA 308 471 ? ? ? A . n A 1 309 MSE 309 472 ? ? ? A . n # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id ADP _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 501 _pdbx_nonpoly_scheme.auth_seq_num 501 _pdbx_nonpoly_scheme.pdb_mon_id ADP _pdbx_nonpoly_scheme.auth_mon_id ADP _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 19 A MSE 182 ? MET 'modified residue' 2 A MSE 27 A MSE 190 ? MET 'modified residue' 3 A MSE 35 A MSE 198 ? MET 'modified residue' 4 A MSE 66 A MSE 229 ? MET 'modified residue' 5 A MSE 158 A MSE 321 ? MET 'modified residue' 6 A MSE 212 A MSE 375 ? MET 'modified residue' 7 A MSE 267 A MSE 430 ? MET 'modified residue' 8 A MSE 296 A MSE 459 ? MET 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-05-23 2 'Structure model' 1 1 2018-07-18 3 'Structure model' 1 2 2020-01-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Source and taxonomy' 4 3 'Structure model' 'Author supporting evidence' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' entity_src_gen 3 3 'Structure model' pdbx_audit_support # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.title' 5 2 'Structure model' '_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id' 6 3 'Structure model' '_pdbx_audit_support.funding_organization' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 94.1167 31.3932 -1.8456 0.4586 0.5323 0.5628 0.0189 -0.0821 -0.0363 1.1078 0.5971 0.8577 0.4456 0.1384 -0.4172 0.2335 -0.0911 0.0120 0.1711 -0.2812 -0.3602 0.0400 0.0539 0.1173 'X-RAY DIFFRACTION' 2 ? refined 59.4437 33.1071 0.9823 0.5949 0.6171 0.5923 -0.0456 0.0577 0.0040 0.6972 0.2580 0.5916 -0.3389 -0.5612 0.3080 -0.0107 -0.2369 -0.0003 -0.2604 0.2796 0.2206 -0.1009 0.1355 -0.1850 'X-RAY DIFFRACTION' 3 ? refined 80.8172 28.3423 16.3421 0.6856 0.9721 0.8739 0.0098 -0.2071 -0.0019 0.0030 0.0438 0.0145 0.0001 0.0030 -0.0234 0.0468 0.2228 0.0000 -0.0792 -0.0078 0.1515 0.1461 -0.2676 -0.0088 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 164 A 360 ;chain 'A' and (resid 164 through 360) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 361 A 447 ;chain 'A' and (resid 361 through 447 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 448 A 468 ;chain 'A' and (resid 448 through 468 ) ; ? ? ? ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.10_2155 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? iMOSFLM ? ? ? . 4 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 5 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELXCD ? ? ? . 6 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 7 # _pdbx_entry_details.compound_details ? _pdbx_entry_details.entry_id 6B5D _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;Katanin is a microtubule-severing protein. It is composed of a AAA ATPase subunit and a regulatory subunit (Mei-1/2). Katanin crystals only contained an AAA ATPase domain. Authors indicate: we observed degradation during crystallization likely due to sensitivity to proteolysis at the AAA-MIT linker region. ; _pdbx_entry_details.source_details ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 166 ? ? -126.23 -67.62 2 1 ALA A 167 ? ? -160.45 114.93 3 1 ALA A 172 ? ? 170.40 156.97 4 1 VAL A 209 ? ? -123.25 -54.90 5 1 PHE A 219 ? ? -103.18 68.85 6 1 TYR A 284 ? ? -102.19 67.73 7 1 ALA A 285 ? ? 42.92 -126.66 8 1 VAL A 313 ? ? -136.29 -40.62 9 1 THR A 393 ? ? -104.38 58.75 10 1 ALA A 449 ? ? -96.70 -63.26 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A TYR 170 ? CG ? A TYR 7 CG 2 1 Y 1 A TYR 170 ? CD1 ? A TYR 7 CD1 3 1 Y 1 A TYR 170 ? CD2 ? A TYR 7 CD2 4 1 Y 1 A TYR 170 ? CE1 ? A TYR 7 CE1 5 1 Y 1 A TYR 170 ? CE2 ? A TYR 7 CE2 6 1 Y 1 A TYR 170 ? CZ ? A TYR 7 CZ 7 1 Y 1 A TYR 170 ? OH ? A TYR 7 OH 8 1 Y 1 A ASP 171 ? CG ? A ASP 8 CG 9 1 Y 1 A ASP 171 ? OD1 ? A ASP 8 OD1 10 1 Y 1 A ASP 171 ? OD2 ? A ASP 8 OD2 11 1 Y 1 A TYR 173 ? CG ? A TYR 10 CG 12 1 Y 1 A TYR 173 ? CD1 ? A TYR 10 CD1 13 1 Y 1 A TYR 173 ? CD2 ? A TYR 10 CD2 14 1 Y 1 A TYR 173 ? CE1 ? A TYR 10 CE1 15 1 Y 1 A TYR 173 ? CE2 ? A TYR 10 CE2 16 1 Y 1 A TYR 173 ? CZ ? A TYR 10 CZ 17 1 Y 1 A TYR 173 ? OH ? A TYR 10 OH # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A TRP 266 ? A TRP 103 2 1 Y 1 A ARG 267 ? A ARG 104 3 1 Y 1 A GLY 268 ? A GLY 105 4 1 Y 1 A ASP 269 ? A ASP 106 5 1 Y 1 A GLY 299 ? A GLY 136 6 1 Y 1 A GLN 300 ? A GLN 137 7 1 Y 1 A ARG 301 ? A ARG 138 8 1 Y 1 A GLY 302 ? A GLY 139 9 1 Y 1 A ASN 303 ? A ASN 140 10 1 Y 1 A SER 304 ? A SER 141 11 1 Y 1 A GLY 305 ? A GLY 142 12 1 Y 1 A GLU 306 ? A GLU 143 13 1 Y 1 A HIS 307 ? A HIS 144 14 1 Y 1 A ASN 326 ? A ASN 163 15 1 Y 1 A LYS 327 ? A LYS 164 16 1 Y 1 A PHE 328 ? A PHE 165 17 1 Y 1 A ASP 329 ? A ASP 166 18 1 Y 1 A SER 330 ? A SER 167 19 1 Y 1 A ARG 331 ? A ARG 168 20 1 Y 1 A PHE 469 ? A PHE 306 21 1 Y 1 A GLY 470 ? A GLY 307 22 1 Y 1 A ALA 471 ? A ALA 308 23 1 Y 1 A MSE 472 ? A MSE 309 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number GM110283 _pdbx_audit_support.ordinal 1 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name "ADENOSINE-5'-DIPHOSPHATE" _pdbx_entity_nonpoly.comp_id ADP # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'light scattering' _pdbx_struct_assembly_auth_evidence.details ? #