HEADER TRANSFERASE 29-SEP-17 6B5F TITLE CRYSTAL STRUCTURE OF NICOTINATE MONONUCLEOTIDE-5,6- TITLE 2 DIMETHYLBENZIMIDAZOLE PHOSPHORIBOSYLTRANSFERASE COBT FROM YERSINIA TITLE 3 ENTEROCOLITICA COMPND MOL_ID: 1; COMPND 2 MOLECULE: NICOTINATE-NUCLEOTIDE--DIMETHYLBENZIMIDAZOLE COMPND 3 PHOSPHORIBOSYLTRANSFERASE; COMPND 4 CHAIN: A, B; COMPND 5 SYNONYM: NN:DBI PRT,N(1)-ALPHA-PHOSPHORIBOSYLTRANSFERASE; COMPND 6 EC: 2.4.2.21; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: YERSINIA ENTEROCOLITICA SEROTYPE O:8 / BIOTYPE SOURCE 3 1B (STRAIN NCTC 13174 / 8081); SOURCE 4 ORGANISM_TAXID: 393305; SOURCE 5 STRAIN: NCTC 13174 / 8081; SOURCE 6 GENE: COBT, YE2707; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS PHOSPHORIBOSYLTRANSFERASE, 5, 6-DIMETHYLBENZIMIDAZOLE, NICOTINATE KEYWDS 2 MONONUCLEOTIDE, TRANSFERASE, STRUCTURAL GENOMICS, CSGID, CENTER FOR KEYWDS 3 STRUCTURAL GENOMICS OF INFECTIOUS DISEASES, NIAID, NATIONAL KEYWDS 4 INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES EXPDTA X-RAY DIFFRACTION AUTHOR P.J.STOGIOS,T.SKARINA,C.MCCHESNEY,T.GRIMSHAW,A.SAVCHENKO, AUTHOR 2 W.F.ANDERSON,CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES AUTHOR 3 (CSGID) REVDAT 3 04-OCT-23 6B5F 1 REMARK REVDAT 2 11-DEC-19 6B5F 1 REMARK REVDAT 1 18-OCT-17 6B5F 0 JRNL AUTH P.J.STOGIOS JRNL TITL CRYSTAL STRUCTURE OF NICOTINATE JRNL TITL 2 MONONUCLEOTIDE-5,6-DIMETHYLBENZIMIDAZOLE JRNL TITL 3 PHOSPHORIBOSYLTRANSFERASE COBT FROM YERSINIA ENTEROCOLITICA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_2733 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.11 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 47176 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.180 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.240 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.1160 - 4.6742 1.00 3449 153 0.1585 0.1596 REMARK 3 2 4.6742 - 3.7144 1.00 3318 148 0.1260 0.1545 REMARK 3 3 3.7144 - 3.2462 1.00 3286 146 0.1334 0.1579 REMARK 3 4 3.2462 - 2.9500 1.00 3251 145 0.1527 0.1861 REMARK 3 5 2.9500 - 2.7388 1.00 3251 143 0.1481 0.1729 REMARK 3 6 2.7388 - 2.5775 1.00 3225 148 0.1545 0.2089 REMARK 3 7 2.5775 - 2.4486 1.00 3247 140 0.1523 0.2157 REMARK 3 8 2.4486 - 2.3421 1.00 3209 144 0.1523 0.1895 REMARK 3 9 2.3421 - 2.2520 1.00 3197 141 0.1590 0.1941 REMARK 3 10 2.2520 - 2.1743 1.00 3227 145 0.1528 0.2278 REMARK 3 11 2.1743 - 2.1064 0.99 3175 142 0.1666 0.2129 REMARK 3 12 2.1064 - 2.0462 0.99 3186 140 0.1771 0.2022 REMARK 3 13 2.0462 - 1.9924 0.99 3190 131 0.1821 0.2692 REMARK 3 14 1.9924 - 1.9438 0.93 2967 132 0.2010 0.2250 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.400 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 5053 REMARK 3 ANGLE : 0.697 6854 REMARK 3 CHIRALITY : 0.041 824 REMARK 3 PLANARITY : 0.004 895 REMARK 3 DIHEDRAL : 17.191 1863 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID -1:49) REMARK 3 ORIGIN FOR THE GROUP (A): 23.1639 28.4693 54.4169 REMARK 3 T TENSOR REMARK 3 T11: 0.2067 T22: 0.1912 REMARK 3 T33: 0.1925 T12: 0.0431 REMARK 3 T13: -0.0118 T23: -0.0251 REMARK 3 L TENSOR REMARK 3 L11: 5.2762 L22: 4.8604 REMARK 3 L33: 4.8111 L12: 3.1751 REMARK 3 L13: -2.5894 L23: -1.6437 REMARK 3 S TENSOR REMARK 3 S11: -0.3555 S12: 0.1002 S13: -0.4063 REMARK 3 S21: -0.2803 S22: 0.1526 S23: -0.0659 REMARK 3 S31: 0.5470 S32: -0.3069 S33: 0.2396 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 50:137) REMARK 3 ORIGIN FOR THE GROUP (A): 42.0857 43.9609 68.6415 REMARK 3 T TENSOR REMARK 3 T11: 0.2026 T22: 0.2614 REMARK 3 T33: 0.2485 T12: 0.0159 REMARK 3 T13: 0.0017 T23: -0.0009 REMARK 3 L TENSOR REMARK 3 L11: 1.1869 L22: 2.3145 REMARK 3 L33: 1.2122 L12: 0.5421 REMARK 3 L13: -0.0173 L23: 0.4278 REMARK 3 S TENSOR REMARK 3 S11: -0.0546 S12: -0.0790 S13: -0.0605 REMARK 3 S21: -0.0056 S22: 0.0442 S23: -0.2616 REMARK 3 S31: -0.0485 S32: 0.1257 S33: -0.0070 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 138:165) REMARK 3 ORIGIN FOR THE GROUP (A): 40.7311 47.5884 54.4920 REMARK 3 T TENSOR REMARK 3 T11: 0.2737 T22: 0.2450 REMARK 3 T33: 0.1701 T12: -0.0268 REMARK 3 T13: 0.0161 T23: -0.0070 REMARK 3 L TENSOR REMARK 3 L11: 2.2364 L22: 2.0204 REMARK 3 L33: 0.4799 L12: -1.5468 REMARK 3 L13: 0.1604 L23: -0.5504 REMARK 3 S TENSOR REMARK 3 S11: -0.0097 S12: 0.1408 S13: 0.1047 REMARK 3 S21: -0.1725 S22: -0.0153 S23: -0.1429 REMARK 3 S31: -0.1283 S32: 0.0347 S33: 0.0466 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 166:342) REMARK 3 ORIGIN FOR THE GROUP (A): 27.4633 45.7522 64.8481 REMARK 3 T TENSOR REMARK 3 T11: 0.1690 T22: 0.2013 REMARK 3 T33: 0.1830 T12: 0.0145 REMARK 3 T13: -0.0102 T23: 0.0017 REMARK 3 L TENSOR REMARK 3 L11: 1.0402 L22: 2.3008 REMARK 3 L33: 1.5686 L12: 0.2291 REMARK 3 L13: -0.0062 L23: 0.1881 REMARK 3 S TENSOR REMARK 3 S11: -0.0261 S12: -0.0456 S13: 0.0913 REMARK 3 S21: -0.0197 S22: -0.0167 S23: 0.1082 REMARK 3 S31: -0.0558 S32: -0.1053 S33: 0.0455 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN B AND RESID 0:48) REMARK 3 ORIGIN FOR THE GROUP (A): 25.6671 32.7905 94.0840 REMARK 3 T TENSOR REMARK 3 T11: 0.1940 T22: 0.2090 REMARK 3 T33: 0.2298 T12: 0.0323 REMARK 3 T13: -0.0065 T23: -0.0259 REMARK 3 L TENSOR REMARK 3 L11: 3.9638 L22: 5.9620 REMARK 3 L33: 4.0910 L12: 4.8073 REMARK 3 L13: -2.8172 L23: -3.6987 REMARK 3 S TENSOR REMARK 3 S11: 0.3205 S12: -0.3820 S13: -0.0568 REMARK 3 S21: 0.5117 S22: -0.4170 S23: -0.2129 REMARK 3 S31: -0.4334 S32: 0.4348 S33: 0.1252 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN B AND RESID 49:272) REMARK 3 ORIGIN FOR THE GROUP (A): 7.8752 16.6298 84.1237 REMARK 3 T TENSOR REMARK 3 T11: 0.2338 T22: 0.2102 REMARK 3 T33: 0.1964 T12: 0.0046 REMARK 3 T13: 0.0081 T23: 0.0050 REMARK 3 L TENSOR REMARK 3 L11: 1.5999 L22: 1.1211 REMARK 3 L33: 1.0891 L12: 0.2263 REMARK 3 L13: 0.3431 L23: 0.0995 REMARK 3 S TENSOR REMARK 3 S11: -0.0377 S12: 0.0075 S13: -0.0179 REMARK 3 S21: -0.0606 S22: -0.0192 S23: 0.0521 REMARK 3 S31: -0.0054 S32: -0.0960 S33: 0.0609 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN B AND RESID 273:308) REMARK 3 ORIGIN FOR THE GROUP (A): 11.3045 30.9163 86.0783 REMARK 3 T TENSOR REMARK 3 T11: 0.2236 T22: 0.2354 REMARK 3 T33: 0.2734 T12: -0.0049 REMARK 3 T13: -0.0202 T23: -0.0580 REMARK 3 L TENSOR REMARK 3 L11: 4.0958 L22: 4.2102 REMARK 3 L33: 4.5742 L12: -1.0205 REMARK 3 L13: -2.1958 L23: -3.0522 REMARK 3 S TENSOR REMARK 3 S11: 0.0728 S12: 0.2177 S13: 0.2649 REMARK 3 S21: 0.0166 S22: -0.0192 S23: 0.1644 REMARK 3 S31: -0.2622 S32: -0.2175 S33: -0.0589 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN B AND RESID 309:340) REMARK 3 ORIGIN FOR THE GROUP (A): 25.9550 28.9552 79.2703 REMARK 3 T TENSOR REMARK 3 T11: 0.2430 T22: 0.1875 REMARK 3 T33: 0.1625 T12: 0.0300 REMARK 3 T13: 0.0372 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 9.7410 L22: 4.1971 REMARK 3 L33: 4.2047 L12: 4.2599 REMARK 3 L13: 3.4213 L23: 1.8729 REMARK 3 S TENSOR REMARK 3 S11: 0.1586 S12: -0.1932 S13: -0.0797 REMARK 3 S21: 0.0377 S22: -0.0823 S23: -0.0676 REMARK 3 S31: 0.0964 S32: -0.0378 S33: -0.0438 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6B5F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1000230296. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-AUG-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47242 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.6200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.98 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.57500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.270 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1L5O REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES PH 6.5, 0.2 M AMMONIUM REMARK 280 SULFATE, 30% (W/V) PEG 5K MME, CRYOPROTECTANT PARATONE, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.07750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.50000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.93750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 59.50000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.07750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.93750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -70.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 343 REMARK 465 ASN A 344 REMARK 465 ILE A 345 REMARK 465 GLU A 346 REMARK 465 LEU A 347 REMARK 465 PRO A 348 REMARK 465 GLY A 349 REMARK 465 CYS A 350 REMARK 465 VAL A 351 REMARK 465 ASN A 352 REMARK 465 GLN B -1 REMARK 465 ILE B 200 REMARK 465 GLY B 201 REMARK 465 ALA B 202 REMARK 465 ASN B 203 REMARK 465 PHE B 204 REMARK 465 ALA B 341 REMARK 465 GLU B 342 REMARK 465 SER B 343 REMARK 465 ASN B 344 REMARK 465 ILE B 345 REMARK 465 GLU B 346 REMARK 465 LEU B 347 REMARK 465 PRO B 348 REMARK 465 GLY B 349 REMARK 465 CYS B 350 REMARK 465 VAL B 351 REMARK 465 ASN B 352 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 15 92.97 -65.72 REMARK 500 ASP A 262 -115.11 -106.97 REMARK 500 SER A 287 -81.69 -114.09 REMARK 500 ARG A 313 23.27 -148.31 REMARK 500 GLU A 316 -7.25 68.58 REMARK 500 SER A 339 -57.89 -125.65 REMARK 500 ALA B 177 8.27 80.28 REMARK 500 ASP B 262 -108.68 -101.49 REMARK 500 SER B 287 -80.68 -118.40 REMARK 500 ARG B 313 15.39 -144.14 REMARK 500 SER B 339 -153.73 -124.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 912 DISTANCE = 6.06 ANGSTROMS REMARK 525 HOH A 913 DISTANCE = 6.22 ANGSTROMS REMARK 525 HOH A 914 DISTANCE = 6.64 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP07570 RELATED DB: TARGETTRACK REMARK 900 RELATED ID: IDP07570 RELATED DB: TARGETTRACK DBREF 6B5F A 1 352 UNP A1JTP8 COBT_YERE8 1 352 DBREF 6B5F B 1 352 UNP A1JTP8 COBT_YERE8 1 352 SEQADV 6B5F GLN A -1 UNP A1JTP8 EXPRESSION TAG SEQADV 6B5F GLY A 0 UNP A1JTP8 EXPRESSION TAG SEQADV 6B5F GLN B -1 UNP A1JTP8 EXPRESSION TAG SEQADV 6B5F GLY B 0 UNP A1JTP8 EXPRESSION TAG SEQRES 1 A 354 GLN GLY MET GLN THR LEU SER SER ILE LEU ARG THR ILE SEQRES 2 A 354 ALA PRO LEU ASP SER LYS ALA MET ALA ARG ALA THR THR SEQRES 3 A 354 ARG LEU ASP GLY LEU LEU LYS PRO GLN GLY SER LEU GLY SEQRES 4 A 354 ARG LEU GLU GLN LEU ALA ILE GLN LEU ALA GLY MET ARG SEQRES 5 A 354 GLY LEU TYR GLY HIS GLN VAL ASP ARG LYS GLN ILE ILE SEQRES 6 A 354 VAL MET ALA ALA ASP HIS GLY VAL TYR ASP GLU GLY VAL SEQRES 7 A 354 ALA ILE SER PRO ARG VAL VAL THR MET VAL GLN ALA LEU SEQRES 8 A 354 ASN MET VAL ARG GLY VAL THR GLY VAL CYS VAL LEU ALA SEQRES 9 A 354 ALA ASN ALA GLY ALA GLU VAL LYS ILE VAL ASP VAL GLY SEQRES 10 A 354 ILE ASP SER ASP THR LEU PRO GLY VAL ILE ASP MET LYS SEQRES 11 A 354 VAL ALA ARG GLY SER GLY ASN ILE ALA ARG GLY ALA ALA SEQRES 12 A 354 MET THR ARG GLN GLN ALA GLU ASP LEU LEU ILE ALA SER SEQRES 13 A 354 ALA THR LEU THR LEU GLN GLN ALA ALA GLY GLY VAL LYS SEQRES 14 A 354 VAL PHE GLY VAL GLY GLU LEU GLY MET ALA ASN THR THR SEQRES 15 A 354 PRO ALA ALA ALA MET VAL SER VAL PHE THR ASP SER ASP SEQRES 16 A 354 PRO GLU LEU ALA VAL GLY ILE GLY ALA ASN PHE PRO SER SEQRES 17 A 354 GLU GLN LEU HIS HIS LYS VAL ALA VAL VAL ARG ARG ALA SEQRES 18 A 354 ILE GLU THR ASN GLN PRO ASP ALA SER ASP GLY ILE ASP SEQRES 19 A 354 VAL LEU ALA LYS VAL GLY GLY PHE ASP LEU VAL GLY MET SEQRES 20 A 354 THR GLY VAL MET LEU GLY ALA ALA ALA ALA GLY LEU PRO SEQRES 21 A 354 VAL VAL LEU ASP GLY PHE LEU SER TYR ALA SER ALA LEU SEQRES 22 A 354 ALA ALA CYS ARG ILE GLU ALA LYS VAL ARG ASP TYR LEU SEQRES 23 A 354 ILE PRO SER HIS LEU SER ALA GLU LYS GLY ALA VAL ILE SEQRES 24 A 354 ALA LEU ASN HIS LEU GLN LEU GLU PRO TYR LEU GLN MET SEQRES 25 A 354 GLY MET ARG LEU GLY GLU GLY SER GLY ALA ALA LEU ALA SEQRES 26 A 354 MET HIS LEU VAL ASP ALA ALA CYS ALA MET TYR ASN ASN SEQRES 27 A 354 MET GLY SER LEU ALA GLU SER ASN ILE GLU LEU PRO GLY SEQRES 28 A 354 CYS VAL ASN SEQRES 1 B 354 GLN GLY MET GLN THR LEU SER SER ILE LEU ARG THR ILE SEQRES 2 B 354 ALA PRO LEU ASP SER LYS ALA MET ALA ARG ALA THR THR SEQRES 3 B 354 ARG LEU ASP GLY LEU LEU LYS PRO GLN GLY SER LEU GLY SEQRES 4 B 354 ARG LEU GLU GLN LEU ALA ILE GLN LEU ALA GLY MET ARG SEQRES 5 B 354 GLY LEU TYR GLY HIS GLN VAL ASP ARG LYS GLN ILE ILE SEQRES 6 B 354 VAL MET ALA ALA ASP HIS GLY VAL TYR ASP GLU GLY VAL SEQRES 7 B 354 ALA ILE SER PRO ARG VAL VAL THR MET VAL GLN ALA LEU SEQRES 8 B 354 ASN MET VAL ARG GLY VAL THR GLY VAL CYS VAL LEU ALA SEQRES 9 B 354 ALA ASN ALA GLY ALA GLU VAL LYS ILE VAL ASP VAL GLY SEQRES 10 B 354 ILE ASP SER ASP THR LEU PRO GLY VAL ILE ASP MET LYS SEQRES 11 B 354 VAL ALA ARG GLY SER GLY ASN ILE ALA ARG GLY ALA ALA SEQRES 12 B 354 MET THR ARG GLN GLN ALA GLU ASP LEU LEU ILE ALA SER SEQRES 13 B 354 ALA THR LEU THR LEU GLN GLN ALA ALA GLY GLY VAL LYS SEQRES 14 B 354 VAL PHE GLY VAL GLY GLU LEU GLY MET ALA ASN THR THR SEQRES 15 B 354 PRO ALA ALA ALA MET VAL SER VAL PHE THR ASP SER ASP SEQRES 16 B 354 PRO GLU LEU ALA VAL GLY ILE GLY ALA ASN PHE PRO SER SEQRES 17 B 354 GLU GLN LEU HIS HIS LYS VAL ALA VAL VAL ARG ARG ALA SEQRES 18 B 354 ILE GLU THR ASN GLN PRO ASP ALA SER ASP GLY ILE ASP SEQRES 19 B 354 VAL LEU ALA LYS VAL GLY GLY PHE ASP LEU VAL GLY MET SEQRES 20 B 354 THR GLY VAL MET LEU GLY ALA ALA ALA ALA GLY LEU PRO SEQRES 21 B 354 VAL VAL LEU ASP GLY PHE LEU SER TYR ALA SER ALA LEU SEQRES 22 B 354 ALA ALA CYS ARG ILE GLU ALA LYS VAL ARG ASP TYR LEU SEQRES 23 B 354 ILE PRO SER HIS LEU SER ALA GLU LYS GLY ALA VAL ILE SEQRES 24 B 354 ALA LEU ASN HIS LEU GLN LEU GLU PRO TYR LEU GLN MET SEQRES 25 B 354 GLY MET ARG LEU GLY GLU GLY SER GLY ALA ALA LEU ALA SEQRES 26 B 354 MET HIS LEU VAL ASP ALA ALA CYS ALA MET TYR ASN ASN SEQRES 27 B 354 MET GLY SER LEU ALA GLU SER ASN ILE GLU LEU PRO GLY SEQRES 28 B 354 CYS VAL ASN HET SO4 A 401 5 HET CL A 402 1 HET SO4 B 401 5 HET GOL B 402 6 HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 SO4 2(O4 S 2-) FORMUL 4 CL CL 1- FORMUL 6 GOL C3 H8 O3 FORMUL 7 HOH *825(H2 O) HELIX 1 AA1 THR A 3 THR A 10 1 8 HELIX 2 AA2 ASP A 15 GLY A 28 1 14 HELIX 3 AA3 LEU A 36 GLY A 48 1 13 HELIX 4 AA4 HIS A 69 GLY A 75 5 7 HELIX 5 AA5 VAL A 82 GLY A 94 1 13 HELIX 6 AA6 THR A 96 ALA A 105 1 10 HELIX 7 AA7 THR A 143 GLY A 164 1 22 HELIX 8 AA8 ASN A 178 ASP A 191 1 14 HELIX 9 AA9 ASP A 193 VAL A 198 1 6 HELIX 10 AB1 PRO A 205 GLU A 207 5 3 HELIX 11 AB2 GLN A 208 GLN A 224 1 17 HELIX 12 AB3 ASP A 229 GLY A 238 1 10 HELIX 13 AB4 GLY A 239 GLY A 256 1 18 HELIX 14 AB5 GLY A 263 GLU A 277 1 15 HELIX 15 AB6 ALA A 278 ASP A 282 5 5 HELIX 16 AB7 GLY A 294 GLN A 303 1 10 HELIX 17 AB8 GLY A 317 MET A 337 1 21 HELIX 18 AB9 THR B 3 THR B 10 1 8 HELIX 19 AC1 ASP B 15 GLY B 28 1 14 HELIX 20 AC2 LEU B 36 GLY B 48 1 13 HELIX 21 AC3 HIS B 69 GLY B 75 5 7 HELIX 22 AC4 VAL B 82 GLY B 94 1 13 HELIX 23 AC5 THR B 96 GLY B 106 1 11 HELIX 24 AC6 THR B 143 GLY B 164 1 22 HELIX 25 AC7 ASN B 178 ASP B 191 1 14 HELIX 26 AC8 ASP B 193 VAL B 198 1 6 HELIX 27 AC9 SER B 206 GLN B 224 1 19 HELIX 28 AD1 ASP B 229 GLY B 238 1 10 HELIX 29 AD2 GLY B 239 GLY B 256 1 18 HELIX 30 AD3 GLY B 263 GLU B 277 1 15 HELIX 31 AD4 ALA B 278 ASP B 282 5 5 HELIX 32 AD5 GLY B 294 GLN B 303 1 10 HELIX 33 AD6 GLY B 317 MET B 337 1 21 SHEET 1 AA1 6 ILE A 125 ASP A 126 0 SHEET 2 AA1 6 ALA A 107 GLY A 115 1 N ASP A 113 O ILE A 125 SHEET 3 AA1 6 LYS A 60 ALA A 67 1 N VAL A 64 O VAL A 112 SHEET 4 AA1 6 VAL A 168 LEU A 174 1 O GLY A 170 N ILE A 63 SHEET 5 AA1 6 VAL A 259 VAL A 260 1 O VAL A 260 N PHE A 169 SHEET 6 AA1 6 LEU A 284 ILE A 285 1 O ILE A 285 N VAL A 259 SHEET 1 AA2 6 ILE B 125 ASP B 126 0 SHEET 2 AA2 6 ALA B 107 GLY B 115 1 N ASP B 113 O ILE B 125 SHEET 3 AA2 6 LYS B 60 ALA B 67 1 N VAL B 64 O LYS B 110 SHEET 4 AA2 6 VAL B 168 LEU B 174 1 O GLY B 170 N ILE B 63 SHEET 5 AA2 6 VAL B 259 VAL B 260 1 O VAL B 260 N PHE B 169 SHEET 6 AA2 6 LEU B 284 ILE B 285 1 O ILE B 285 N VAL B 259 SITE 1 AC1 11 ALA A 77 ALA A 177 ASN A 178 THR A 179 SITE 2 AC1 11 ALA A 202 HOH A 546 HOH A 569 HOH A 577 SITE 3 AC1 11 HOH A 580 HOH A 594 HOH A 680 SITE 1 AC2 2 HIS A 211 ALA A 214 SITE 1 AC3 10 ALA B 77 ILE B 78 ALA B 177 ASN B 178 SITE 2 AC3 10 THR B 179 HOH B 549 HOH B 579 HOH B 590 SITE 3 AC3 10 HOH B 615 HOH B 715 SITE 1 AC4 6 GLY B 70 ASP B 73 GLY B 134 ASN B 135 SITE 2 AC4 6 ARG B 138 HOH B 679 CRYST1 72.155 73.875 119.000 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013859 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013536 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008403 0.00000