data_6B8K # _entry.id 6B8K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.359 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6B8K pdb_00006b8k 10.2210/pdb6b8k/pdb WWPDB D_1000230449 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6B8K _pdbx_database_status.recvd_initial_deposition_date 2017-10-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kishor, C.' 1 ? 'Blanchard, H.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Chem.Biol.Drug Des.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1747-0285 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 92 _citation.language ? _citation.page_first 1801 _citation.page_last 1808 _citation.title 'Lactulose as a novel template for anticancer drug development targeting galectins.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1111/cbdd.13348 _citation.pdbx_database_id_PubMed 29888844 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kishor, C.' 1 ? primary 'Ross, R.L.' 2 ? primary 'Blanchard, H.' 3 0000-0003-3372-5027 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6B8K _cell.details ? _cell.formula_units_Z ? _cell.length_a 36.170 _cell.length_a_esd ? _cell.length_b 57.870 _cell.length_b_esd ? _cell.length_c 62.600 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6B8K _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Galectin-3 15758.100 1 ? ? 'CRD (UNP residues 112-250)' ? 2 branched man 'beta-D-galactopyranose-(1-4)-beta-D-fructofuranose' 342.297 1 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 3 ? ? ? ? 4 water nat water 18.015 174 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 ;Gal-3, 35 kDa lectin, Carbohydrate-binding protein 35, CBP 35, Galactose-specific lectin 3, Galactoside-binding protein, GALBP, IgE-binding protein, L-31, Laminin-binding protein, Lectin L-29, Mac-2 antigen ; 2 lactulose # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPLIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFP FESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFP FESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 ILE n 1 5 VAL n 1 6 PRO n 1 7 TYR n 1 8 ASN n 1 9 LEU n 1 10 PRO n 1 11 LEU n 1 12 PRO n 1 13 GLY n 1 14 GLY n 1 15 VAL n 1 16 VAL n 1 17 PRO n 1 18 ARG n 1 19 MET n 1 20 LEU n 1 21 ILE n 1 22 THR n 1 23 ILE n 1 24 LEU n 1 25 GLY n 1 26 THR n 1 27 VAL n 1 28 LYS n 1 29 PRO n 1 30 ASN n 1 31 ALA n 1 32 ASN n 1 33 ARG n 1 34 ILE n 1 35 ALA n 1 36 LEU n 1 37 ASP n 1 38 PHE n 1 39 GLN n 1 40 ARG n 1 41 GLY n 1 42 ASN n 1 43 ASP n 1 44 VAL n 1 45 ALA n 1 46 PHE n 1 47 HIS n 1 48 PHE n 1 49 ASN n 1 50 PRO n 1 51 ARG n 1 52 PHE n 1 53 ASN n 1 54 GLU n 1 55 ASN n 1 56 ASN n 1 57 ARG n 1 58 ARG n 1 59 VAL n 1 60 ILE n 1 61 VAL n 1 62 CYS n 1 63 ASN n 1 64 THR n 1 65 LYS n 1 66 LEU n 1 67 ASP n 1 68 ASN n 1 69 ASN n 1 70 TRP n 1 71 GLY n 1 72 ARG n 1 73 GLU n 1 74 GLU n 1 75 ARG n 1 76 GLN n 1 77 SER n 1 78 VAL n 1 79 PHE n 1 80 PRO n 1 81 PHE n 1 82 GLU n 1 83 SER n 1 84 GLY n 1 85 LYS n 1 86 PRO n 1 87 PHE n 1 88 LYS n 1 89 ILE n 1 90 GLN n 1 91 VAL n 1 92 LEU n 1 93 VAL n 1 94 GLU n 1 95 PRO n 1 96 ASP n 1 97 HIS n 1 98 PHE n 1 99 LYS n 1 100 VAL n 1 101 ALA n 1 102 VAL n 1 103 ASN n 1 104 ASP n 1 105 ALA n 1 106 HIS n 1 107 LEU n 1 108 LEU n 1 109 GLN n 1 110 TYR n 1 111 ASN n 1 112 HIS n 1 113 ARG n 1 114 VAL n 1 115 LYS n 1 116 LYS n 1 117 LEU n 1 118 ASN n 1 119 GLU n 1 120 ILE n 1 121 SER n 1 122 LYS n 1 123 LEU n 1 124 GLY n 1 125 ILE n 1 126 SER n 1 127 GLY n 1 128 ASP n 1 129 ILE n 1 130 ASP n 1 131 LEU n 1 132 THR n 1 133 SER n 1 134 ALA n 1 135 SER n 1 136 TYR n 1 137 THR n 1 138 MET n 1 139 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 139 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'LGALS3, MAC2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LEG3_HUMAN _struct_ref.pdbx_db_accession P17931 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GPLIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFP FESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI ; _struct_ref.pdbx_align_begin 112 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6B8K _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 139 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P17931 _struct_ref_seq.db_align_beg 112 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 250 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 112 _struct_ref_seq.pdbx_auth_seq_align_end 250 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FRU 'D-saccharide, beta linking' . beta-D-fructofuranose 'beta-D-fructose; D-fructose; fructose' 'C6 H12 O6' 180.156 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6B8K _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.08 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 40.83 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '31% PEG6000, 100 mM magnesium chloride, 8 mM BME, 100 mM Tris-HCl, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 210r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-10-13 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'double crystal Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.953 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'AUSTRALIAN SYNCHROTRON BEAMLINE MX1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.953 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline MX1 _diffrn_source.pdbx_synchrotron_site 'Australian Synchrotron' # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6B8K _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.28 _reflns.d_resolution_low 30.67 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 34451 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.6 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 12.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 23.4 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high . _reflns_shell.d_res_low ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] 0.00 _refine.B_iso_max ? _refine.B_iso_mean 11.985 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.970 _refine.correlation_coeff_Fo_to_Fc_free 0.960 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6B8K _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.28 _refine.ls_d_res_low 30.67 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 32745 _refine.ls_number_reflns_R_free 1706 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.50 _refine.ls_percent_reflns_R_free 5.0 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.16500 _refine.ls_R_factor_R_free 0.19525 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.16339 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.049 _refine.pdbx_overall_ESU_R_Free 0.053 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 0.741 _refine.overall_SU_ML 0.032 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 1108 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.number_atoms_solvent 174 _refine_hist.number_atoms_total 1308 _refine_hist.d_res_high 1.28 _refine_hist.d_res_low 30.67 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.029 0.020 1284 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.003 0.020 1263 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 2.679 1.971 1769 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.295 3.008 2920 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 7.556 5.000 170 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 35.218 23.881 67 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 10.923 15.000 230 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 13.935 15.000 12 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.171 0.200 199 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.013 0.021 1486 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 320 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 1.333 0.961 593 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.316 0.959 592 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 1.760 1.445 751 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 1.768 1.446 752 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 2.041 1.209 691 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 2.039 1.211 692 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 3.087 1.753 1003 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 4.913 9.259 1473 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 4.514 8.523 1377 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.280 _refine_ls_shell.d_res_low 1.313 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 140 _refine_ls_shell.number_reflns_R_work 2356 _refine_ls_shell.percent_reflns_obs 97.88 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.266 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.236 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6B8K _struct.title 'Crystal structure of Human galectin-3 CRD in complex with Lactulose' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6B8K _struct_keywords.text 'SUGAR BINDING PROTEIN' _struct_keywords.pdbx_keywords 'SUGAR BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 4 ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id LYS _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 116 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id ILE _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 120 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id LYS _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 227 _struct_conf.end_auth_comp_id ILE _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 231 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag both _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_comp_id FRU _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_label_atom_id O4 _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id GAL _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id C1 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id FRU _struct_conn.ptnr1_auth_seq_id 1 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id GAL _struct_conn.ptnr2_auth_seq_id 2 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.448 _struct_conn.pdbx_value_order sing _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id VAL _struct_mon_prot_cis.label_seq_id 5 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id VAL _struct_mon_prot_cis.auth_seq_id 116 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 6 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 117 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -1.65 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 6 ? AA3 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TYR A 7 ? PRO A 10 ? TYR A 118 PRO A 121 AA1 2 LYS A 122 ? GLY A 127 ? LYS A 233 GLY A 238 AA1 3 ILE A 34 ? ARG A 40 ? ILE A 145 ARG A 151 AA1 4 ASP A 43 ? GLU A 54 ? ASP A 154 GLU A 165 AA1 5 ARG A 57 ? LEU A 66 ? ARG A 168 LEU A 177 AA1 6 ASN A 69 ? TRP A 70 ? ASN A 180 TRP A 181 AA2 1 TYR A 7 ? PRO A 10 ? TYR A 118 PRO A 121 AA2 2 LYS A 122 ? GLY A 127 ? LYS A 233 GLY A 238 AA2 3 ILE A 34 ? ARG A 40 ? ILE A 145 ARG A 151 AA2 4 ASP A 43 ? GLU A 54 ? ASP A 154 GLU A 165 AA2 5 ARG A 57 ? LEU A 66 ? ARG A 168 LEU A 177 AA2 6 GLU A 74 ? GLN A 76 ? GLU A 185 GLN A 187 AA3 1 ALA A 105 ? ASN A 111 ? ALA A 216 ASN A 222 AA3 2 HIS A 97 ? VAL A 102 ? HIS A 208 VAL A 213 AA3 3 PRO A 86 ? VAL A 93 ? PRO A 197 VAL A 204 AA3 4 MET A 19 ? VAL A 27 ? MET A 130 VAL A 138 AA3 5 ILE A 129 ? MET A 138 ? ILE A 240 MET A 249 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 9 ? N LEU A 120 O LEU A 123 ? O LEU A 234 AA1 2 3 O LYS A 122 ? O LYS A 233 N GLN A 39 ? N GLN A 150 AA1 3 4 N PHE A 38 ? N PHE A 149 O PHE A 46 ? O PHE A 157 AA1 4 5 N ARG A 51 ? N ARG A 162 O VAL A 59 ? O VAL A 170 AA1 5 6 N LEU A 66 ? N LEU A 177 O ASN A 69 ? O ASN A 180 AA2 1 2 N LEU A 9 ? N LEU A 120 O LEU A 123 ? O LEU A 234 AA2 2 3 O LYS A 122 ? O LYS A 233 N GLN A 39 ? N GLN A 150 AA2 3 4 N PHE A 38 ? N PHE A 149 O PHE A 46 ? O PHE A 157 AA2 4 5 N ARG A 51 ? N ARG A 162 O VAL A 59 ? O VAL A 170 AA2 5 6 N CYS A 62 ? N CYS A 173 O GLU A 74 ? O GLU A 185 AA3 1 2 O LEU A 108 ? O LEU A 219 N VAL A 100 ? N VAL A 211 AA3 2 3 O ALA A 101 ? O ALA A 212 N GLN A 90 ? N GLN A 201 AA3 3 4 O PHE A 87 ? O PHE A 198 N GLY A 25 ? N GLY A 136 AA3 4 5 N LEU A 20 ? N LEU A 131 O THR A 137 ? O THR A 248 # _atom_sites.entry_id 6B8K _atom_sites.fract_transf_matrix[1][1] 0.027647 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017280 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015974 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 112 ? ? ? A . n A 1 2 PRO 2 113 113 PRO PRO A . n A 1 3 LEU 3 114 114 LEU LEU A . n A 1 4 ILE 4 115 115 ILE ILE A . n A 1 5 VAL 5 116 116 VAL VAL A . n A 1 6 PRO 6 117 117 PRO PRO A . n A 1 7 TYR 7 118 118 TYR TYR A . n A 1 8 ASN 8 119 119 ASN ASN A . n A 1 9 LEU 9 120 120 LEU LEU A . n A 1 10 PRO 10 121 121 PRO PRO A . n A 1 11 LEU 11 122 122 LEU LEU A . n A 1 12 PRO 12 123 123 PRO PRO A . n A 1 13 GLY 13 124 124 GLY GLY A . n A 1 14 GLY 14 125 125 GLY GLY A . n A 1 15 VAL 15 126 126 VAL VAL A . n A 1 16 VAL 16 127 127 VAL VAL A . n A 1 17 PRO 17 128 128 PRO PRO A . n A 1 18 ARG 18 129 129 ARG ARG A . n A 1 19 MET 19 130 130 MET MET A . n A 1 20 LEU 20 131 131 LEU LEU A . n A 1 21 ILE 21 132 132 ILE ILE A . n A 1 22 THR 22 133 133 THR THR A . n A 1 23 ILE 23 134 134 ILE ILE A . n A 1 24 LEU 24 135 135 LEU LEU A . n A 1 25 GLY 25 136 136 GLY GLY A . n A 1 26 THR 26 137 137 THR THR A . n A 1 27 VAL 27 138 138 VAL VAL A . n A 1 28 LYS 28 139 139 LYS LYS A . n A 1 29 PRO 29 140 140 PRO PRO A . n A 1 30 ASN 30 141 141 ASN ASN A . n A 1 31 ALA 31 142 142 ALA ALA A . n A 1 32 ASN 32 143 143 ASN ASN A . n A 1 33 ARG 33 144 144 ARG ARG A . n A 1 34 ILE 34 145 145 ILE ILE A . n A 1 35 ALA 35 146 146 ALA ALA A . n A 1 36 LEU 36 147 147 LEU LEU A . n A 1 37 ASP 37 148 148 ASP ASP A . n A 1 38 PHE 38 149 149 PHE PHE A . n A 1 39 GLN 39 150 150 GLN GLN A . n A 1 40 ARG 40 151 151 ARG ARG A . n A 1 41 GLY 41 152 152 GLY GLY A . n A 1 42 ASN 42 153 153 ASN ASN A . n A 1 43 ASP 43 154 154 ASP ASP A . n A 1 44 VAL 44 155 155 VAL VAL A . n A 1 45 ALA 45 156 156 ALA ALA A . n A 1 46 PHE 46 157 157 PHE PHE A . n A 1 47 HIS 47 158 158 HIS HIS A . n A 1 48 PHE 48 159 159 PHE PHE A . n A 1 49 ASN 49 160 160 ASN ASN A . n A 1 50 PRO 50 161 161 PRO PRO A . n A 1 51 ARG 51 162 162 ARG ARG A . n A 1 52 PHE 52 163 163 PHE PHE A . n A 1 53 ASN 53 164 164 ASN ASN A . n A 1 54 GLU 54 165 165 GLU GLU A . n A 1 55 ASN 55 166 166 ASN ASN A . n A 1 56 ASN 56 167 167 ASN ASN A . n A 1 57 ARG 57 168 168 ARG ARG A . n A 1 58 ARG 58 169 169 ARG ARG A . n A 1 59 VAL 59 170 170 VAL VAL A . n A 1 60 ILE 60 171 171 ILE ILE A . n A 1 61 VAL 61 172 172 VAL VAL A . n A 1 62 CYS 62 173 173 CYS CYS A . n A 1 63 ASN 63 174 174 ASN ASN A . n A 1 64 THR 64 175 175 THR THR A . n A 1 65 LYS 65 176 176 LYS LYS A . n A 1 66 LEU 66 177 177 LEU LEU A . n A 1 67 ASP 67 178 178 ASP ASP A . n A 1 68 ASN 68 179 179 ASN ASN A . n A 1 69 ASN 69 180 180 ASN ASN A . n A 1 70 TRP 70 181 181 TRP TRP A . n A 1 71 GLY 71 182 182 GLY GLY A . n A 1 72 ARG 72 183 183 ARG ARG A . n A 1 73 GLU 73 184 184 GLU GLU A . n A 1 74 GLU 74 185 185 GLU GLU A . n A 1 75 ARG 75 186 186 ARG ARG A . n A 1 76 GLN 76 187 187 GLN GLN A . n A 1 77 SER 77 188 188 SER SER A . n A 1 78 VAL 78 189 189 VAL VAL A . n A 1 79 PHE 79 190 190 PHE PHE A . n A 1 80 PRO 80 191 191 PRO PRO A . n A 1 81 PHE 81 192 192 PHE PHE A . n A 1 82 GLU 82 193 193 GLU GLU A . n A 1 83 SER 83 194 194 SER SER A . n A 1 84 GLY 84 195 195 GLY GLY A . n A 1 85 LYS 85 196 196 LYS LYS A . n A 1 86 PRO 86 197 197 PRO PRO A . n A 1 87 PHE 87 198 198 PHE PHE A . n A 1 88 LYS 88 199 199 LYS LYS A . n A 1 89 ILE 89 200 200 ILE ILE A . n A 1 90 GLN 90 201 201 GLN GLN A . n A 1 91 VAL 91 202 202 VAL VAL A . n A 1 92 LEU 92 203 203 LEU LEU A . n A 1 93 VAL 93 204 204 VAL VAL A . n A 1 94 GLU 94 205 205 GLU GLU A . n A 1 95 PRO 95 206 206 PRO PRO A . n A 1 96 ASP 96 207 207 ASP ASP A . n A 1 97 HIS 97 208 208 HIS HIS A . n A 1 98 PHE 98 209 209 PHE PHE A . n A 1 99 LYS 99 210 210 LYS LYS A . n A 1 100 VAL 100 211 211 VAL VAL A . n A 1 101 ALA 101 212 212 ALA ALA A . n A 1 102 VAL 102 213 213 VAL VAL A . n A 1 103 ASN 103 214 214 ASN ASN A . n A 1 104 ASP 104 215 215 ASP ASP A . n A 1 105 ALA 105 216 216 ALA ALA A . n A 1 106 HIS 106 217 217 HIS HIS A . n A 1 107 LEU 107 218 218 LEU LEU A . n A 1 108 LEU 108 219 219 LEU LEU A . n A 1 109 GLN 109 220 220 GLN GLN A . n A 1 110 TYR 110 221 221 TYR TYR A . n A 1 111 ASN 111 222 222 ASN ASN A . n A 1 112 HIS 112 223 223 HIS HIS A . n A 1 113 ARG 113 224 224 ARG ARG A . n A 1 114 VAL 114 225 225 VAL VAL A . n A 1 115 LYS 115 226 226 LYS LYS A . n A 1 116 LYS 116 227 227 LYS LYS A . n A 1 117 LEU 117 228 228 LEU LEU A . n A 1 118 ASN 118 229 229 ASN ASN A . n A 1 119 GLU 119 230 230 GLU GLU A . n A 1 120 ILE 120 231 231 ILE ILE A . n A 1 121 SER 121 232 232 SER SER A . n A 1 122 LYS 122 233 233 LYS LYS A . n A 1 123 LEU 123 234 234 LEU LEU A . n A 1 124 GLY 124 235 235 GLY GLY A . n A 1 125 ILE 125 236 236 ILE ILE A . n A 1 126 SER 126 237 237 SER SER A . n A 1 127 GLY 127 238 238 GLY GLY A . n A 1 128 ASP 128 239 239 ASP ASP A . n A 1 129 ILE 129 240 240 ILE ILE A . n A 1 130 ASP 130 241 241 ASP ASP A . n A 1 131 LEU 131 242 242 LEU LEU A . n A 1 132 THR 132 243 243 THR THR A . n A 1 133 SER 133 244 244 SER SER A . n A 1 134 ALA 134 245 245 ALA ALA A . n A 1 135 SER 135 246 246 SER SER A . n A 1 136 TYR 136 247 247 TYR TYR A . n A 1 137 THR 137 248 248 THR THR A . n A 1 138 MET 138 249 249 MET MET A . n A 1 139 ILE 139 250 250 ILE ILE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CL 1 301 301 CL CL A . D 3 CL 1 302 302 CL CL A . E 3 CL 1 303 303 CL CL A . F 4 HOH 1 401 182 HOH HOH A . F 4 HOH 2 402 199 HOH HOH A . F 4 HOH 3 403 183 HOH HOH A . F 4 HOH 4 404 170 HOH HOH A . F 4 HOH 5 405 129 HOH HOH A . F 4 HOH 6 406 73 HOH HOH A . F 4 HOH 7 407 147 HOH HOH A . F 4 HOH 8 408 66 HOH HOH A . F 4 HOH 9 409 63 HOH HOH A . F 4 HOH 10 410 156 HOH HOH A . F 4 HOH 11 411 138 HOH HOH A . F 4 HOH 12 412 119 HOH HOH A . F 4 HOH 13 413 100 HOH HOH A . F 4 HOH 14 414 60 HOH HOH A . F 4 HOH 15 415 107 HOH HOH A . F 4 HOH 16 416 15 HOH HOH A . F 4 HOH 17 417 103 HOH HOH A . F 4 HOH 18 418 179 HOH HOH A . F 4 HOH 19 419 74 HOH HOH A . F 4 HOH 20 420 51 HOH HOH A . F 4 HOH 21 421 37 HOH HOH A . F 4 HOH 22 422 18 HOH HOH A . F 4 HOH 23 423 141 HOH HOH A . F 4 HOH 24 424 75 HOH HOH A . F 4 HOH 25 425 136 HOH HOH A . F 4 HOH 26 426 39 HOH HOH A . F 4 HOH 27 427 27 HOH HOH A . F 4 HOH 28 428 142 HOH HOH A . F 4 HOH 29 429 134 HOH HOH A . F 4 HOH 30 430 126 HOH HOH A . F 4 HOH 31 431 49 HOH HOH A . F 4 HOH 32 432 33 HOH HOH A . F 4 HOH 33 433 32 HOH HOH A . F 4 HOH 34 434 133 HOH HOH A . F 4 HOH 35 435 128 HOH HOH A . F 4 HOH 36 436 166 HOH HOH A . F 4 HOH 37 437 2 HOH HOH A . F 4 HOH 38 438 57 HOH HOH A . F 4 HOH 39 439 164 HOH HOH A . F 4 HOH 40 440 17 HOH HOH A . F 4 HOH 41 441 78 HOH HOH A . F 4 HOH 42 442 89 HOH HOH A . F 4 HOH 43 443 95 HOH HOH A . F 4 HOH 44 444 108 HOH HOH A . F 4 HOH 45 445 88 HOH HOH A . F 4 HOH 46 446 192 HOH HOH A . F 4 HOH 47 447 165 HOH HOH A . F 4 HOH 48 448 65 HOH HOH A . F 4 HOH 49 449 81 HOH HOH A . F 4 HOH 50 450 94 HOH HOH A . F 4 HOH 51 451 137 HOH HOH A . F 4 HOH 52 452 110 HOH HOH A . F 4 HOH 53 453 22 HOH HOH A . F 4 HOH 54 454 200 HOH HOH A . F 4 HOH 55 455 26 HOH HOH A . F 4 HOH 56 456 173 HOH HOH A . F 4 HOH 57 457 161 HOH HOH A . F 4 HOH 58 458 36 HOH HOH A . F 4 HOH 59 459 8 HOH HOH A . F 4 HOH 60 460 52 HOH HOH A . F 4 HOH 61 461 97 HOH HOH A . F 4 HOH 62 462 9 HOH HOH A . F 4 HOH 63 463 201 HOH HOH A . F 4 HOH 64 464 77 HOH HOH A . F 4 HOH 65 465 159 HOH HOH A . F 4 HOH 66 466 45 HOH HOH A . F 4 HOH 67 467 19 HOH HOH A . F 4 HOH 68 468 31 HOH HOH A . F 4 HOH 69 469 188 HOH HOH A . F 4 HOH 70 470 172 HOH HOH A . F 4 HOH 71 471 111 HOH HOH A . F 4 HOH 72 472 10 HOH HOH A . F 4 HOH 73 473 25 HOH HOH A . F 4 HOH 74 474 169 HOH HOH A . F 4 HOH 75 475 120 HOH HOH A . F 4 HOH 76 476 40 HOH HOH A . F 4 HOH 77 477 6 HOH HOH A . F 4 HOH 78 478 34 HOH HOH A . F 4 HOH 79 479 84 HOH HOH A . F 4 HOH 80 480 48 HOH HOH A . F 4 HOH 81 481 155 HOH HOH A . F 4 HOH 82 482 109 HOH HOH A . F 4 HOH 83 483 122 HOH HOH A . F 4 HOH 84 484 101 HOH HOH A . F 4 HOH 85 485 125 HOH HOH A . F 4 HOH 86 486 46 HOH HOH A . F 4 HOH 87 487 154 HOH HOH A . F 4 HOH 88 488 29 HOH HOH A . F 4 HOH 89 489 152 HOH HOH A . F 4 HOH 90 490 72 HOH HOH A . F 4 HOH 91 491 42 HOH HOH A . F 4 HOH 92 492 50 HOH HOH A . F 4 HOH 93 493 76 HOH HOH A . F 4 HOH 94 494 20 HOH HOH A . F 4 HOH 95 495 124 HOH HOH A . F 4 HOH 96 496 5 HOH HOH A . F 4 HOH 97 497 92 HOH HOH A . F 4 HOH 98 498 181 HOH HOH A . F 4 HOH 99 499 151 HOH HOH A . F 4 HOH 100 500 47 HOH HOH A . F 4 HOH 101 501 146 HOH HOH A . F 4 HOH 102 502 67 HOH HOH A . F 4 HOH 103 503 189 HOH HOH A . F 4 HOH 104 504 98 HOH HOH A . F 4 HOH 105 505 83 HOH HOH A . F 4 HOH 106 506 71 HOH HOH A . F 4 HOH 107 507 12 HOH HOH A . F 4 HOH 108 508 186 HOH HOH A . F 4 HOH 109 509 56 HOH HOH A . F 4 HOH 110 510 53 HOH HOH A . F 4 HOH 111 511 102 HOH HOH A . F 4 HOH 112 512 130 HOH HOH A . F 4 HOH 113 513 106 HOH HOH A . F 4 HOH 114 514 104 HOH HOH A . F 4 HOH 115 515 175 HOH HOH A . F 4 HOH 116 516 123 HOH HOH A . F 4 HOH 117 517 11 HOH HOH A . F 4 HOH 118 518 82 HOH HOH A . F 4 HOH 119 519 41 HOH HOH A . F 4 HOH 120 520 30 HOH HOH A . F 4 HOH 121 521 68 HOH HOH A . F 4 HOH 122 522 112 HOH HOH A . F 4 HOH 123 523 14 HOH HOH A . F 4 HOH 124 524 55 HOH HOH A . F 4 HOH 125 525 21 HOH HOH A . F 4 HOH 126 526 185 HOH HOH A . F 4 HOH 127 527 167 HOH HOH A . F 4 HOH 128 528 197 HOH HOH A . F 4 HOH 129 529 13 HOH HOH A . F 4 HOH 130 530 16 HOH HOH A . F 4 HOH 131 531 184 HOH HOH A . F 4 HOH 132 532 28 HOH HOH A . F 4 HOH 133 533 190 HOH HOH A . F 4 HOH 134 534 157 HOH HOH A . F 4 HOH 135 535 35 HOH HOH A . F 4 HOH 136 536 7 HOH HOH A . F 4 HOH 137 537 174 HOH HOH A . F 4 HOH 138 538 24 HOH HOH A . F 4 HOH 139 539 99 HOH HOH A . F 4 HOH 140 540 191 HOH HOH A . F 4 HOH 141 541 38 HOH HOH A . F 4 HOH 142 542 198 HOH HOH A . F 4 HOH 143 543 158 HOH HOH A . F 4 HOH 144 544 168 HOH HOH A . F 4 HOH 145 545 44 HOH HOH A . F 4 HOH 146 546 163 HOH HOH A . F 4 HOH 147 547 118 HOH HOH A . F 4 HOH 148 548 153 HOH HOH A . F 4 HOH 149 549 176 HOH HOH A . F 4 HOH 150 550 80 HOH HOH A . F 4 HOH 151 551 160 HOH HOH A . F 4 HOH 152 552 196 HOH HOH A . F 4 HOH 153 553 143 HOH HOH A . F 4 HOH 154 554 140 HOH HOH A . F 4 HOH 155 555 105 HOH HOH A . F 4 HOH 156 556 127 HOH HOH A . F 4 HOH 157 557 93 HOH HOH A . F 4 HOH 158 558 162 HOH HOH A . F 4 HOH 159 559 62 HOH HOH A . F 4 HOH 160 560 4 HOH HOH A . F 4 HOH 161 561 113 HOH HOH A . F 4 HOH 162 562 79 HOH HOH A . F 4 HOH 163 563 43 HOH HOH A . F 4 HOH 164 564 135 HOH HOH A . F 4 HOH 165 565 195 HOH HOH A . F 4 HOH 166 566 180 HOH HOH A . F 4 HOH 167 567 90 HOH HOH A . F 4 HOH 168 568 91 HOH HOH A . F 4 HOH 169 569 178 HOH HOH A . F 4 HOH 170 570 121 HOH HOH A . F 4 HOH 171 571 171 HOH HOH A . F 4 HOH 172 572 139 HOH HOH A . F 4 HOH 173 573 58 HOH HOH A . F 4 HOH 174 574 117 HOH HOH A . # _pdbx_molecule_features.prd_id PRD_900038 _pdbx_molecule_features.name lactulose _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class 'Water retention' _pdbx_molecule_features.details oligosaccharide # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_900038 _pdbx_molecule.asym_id B # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 330 ? 1 MORE -23 ? 1 'SSA (A^2)' 7380 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-10-10 2 'Structure model' 2 0 2020-07-29 3 'Structure model' 2 1 2022-07-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Data collection' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Non-polymer description' 5 2 'Structure model' 'Structure summary' 6 3 'Structure model' 'Database references' 7 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' chem_comp 3 2 'Structure model' entity 4 2 'Structure model' entity_name_com 5 2 'Structure model' pdbx_branch_scheme 6 2 'Structure model' pdbx_chem_comp_identifier 7 2 'Structure model' pdbx_entity_branch 8 2 'Structure model' pdbx_entity_branch_descriptor 9 2 'Structure model' pdbx_entity_branch_link 10 2 'Structure model' pdbx_entity_branch_list 11 2 'Structure model' pdbx_entity_nonpoly 12 2 'Structure model' pdbx_molecule_features 13 2 'Structure model' pdbx_nonpoly_scheme 14 2 'Structure model' struct_conn 15 2 'Structure model' struct_site 16 2 'Structure model' struct_site_gen 17 3 'Structure model' chem_comp 18 3 'Structure model' citation 19 3 'Structure model' citation_author 20 3 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.B_iso_or_equiv' 2 2 'Structure model' '_atom_site.Cartn_x' 3 2 'Structure model' '_atom_site.Cartn_y' 4 2 'Structure model' '_atom_site.Cartn_z' 5 2 'Structure model' '_atom_site.auth_asym_id' 6 2 'Structure model' '_atom_site.auth_atom_id' 7 2 'Structure model' '_atom_site.auth_comp_id' 8 2 'Structure model' '_atom_site.auth_seq_id' 9 2 'Structure model' '_atom_site.label_atom_id' 10 2 'Structure model' '_atom_site.label_comp_id' 11 2 'Structure model' '_atom_site.type_symbol' 12 2 'Structure model' '_chem_comp.formula' 13 2 'Structure model' '_chem_comp.formula_weight' 14 2 'Structure model' '_chem_comp.id' 15 2 'Structure model' '_chem_comp.mon_nstd_flag' 16 2 'Structure model' '_chem_comp.name' 17 2 'Structure model' '_chem_comp.type' 18 2 'Structure model' '_entity.formula_weight' 19 2 'Structure model' '_entity.pdbx_description' 20 2 'Structure model' '_entity.src_method' 21 2 'Structure model' '_entity.type' 22 3 'Structure model' '_chem_comp.pdbx_synonyms' 23 3 'Structure model' '_citation.country' 24 3 'Structure model' '_citation.journal_abbrev' 25 3 'Structure model' '_citation.journal_id_CSD' 26 3 'Structure model' '_citation.journal_id_ISSN' 27 3 'Structure model' '_citation.journal_volume' 28 3 'Structure model' '_citation.page_first' 29 3 'Structure model' '_citation.page_last' 30 3 'Structure model' '_citation.pdbx_database_id_DOI' 31 3 'Structure model' '_citation.pdbx_database_id_PubMed' 32 3 'Structure model' '_citation.title' 33 3 'Structure model' '_citation.year' 34 3 'Structure model' '_database_2.pdbx_DOI' 35 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0135 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? MOSFLM ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 508 ? ? O A HOH 526 ? ? 2.05 2 1 O A HOH 418 ? ? O A HOH 489 ? ? 2.14 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CD A GLU 184 ? ? OE2 A GLU 184 ? ? 1.172 1.252 -0.080 0.011 N 2 1 CE1 A TYR 247 ? ? CZ A TYR 247 ? ? 1.265 1.381 -0.116 0.013 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A TYR 118 ? ? CG A TYR 118 ? ? CD1 A TYR 118 ? ? 116.62 121.00 -4.38 0.60 N 2 1 NE A ARG 129 ? A CZ A ARG 129 ? A NH1 A ARG 129 ? A 124.26 120.30 3.96 0.50 N 3 1 NE A ARG 129 ? A CZ A ARG 129 ? A NH2 A ARG 129 ? A 115.77 120.30 -4.53 0.50 N 4 1 NE A ARG 129 ? B CZ A ARG 129 ? B NH2 A ARG 129 ? B 117.08 120.30 -3.22 0.50 N 5 1 NE A ARG 144 ? ? CZ A ARG 144 ? ? NH2 A ARG 144 ? ? 116.98 120.30 -3.32 0.50 N 6 1 NE A ARG 151 ? ? CZ A ARG 151 ? ? NH1 A ARG 151 ? ? 124.28 120.30 3.98 0.50 N 7 1 NE A ARG 168 ? A CZ A ARG 168 ? A NH1 A ARG 168 ? A 124.17 120.30 3.87 0.50 N 8 1 NE A ARG 169 ? B CZ A ARG 169 ? B NH2 A ARG 169 ? B 123.86 120.30 3.56 0.50 N 9 1 OE1 A GLU 184 ? ? CD A GLU 184 ? ? OE2 A GLU 184 ? ? 131.00 123.30 7.70 1.20 N 10 1 NE A ARG 186 ? ? CZ A ARG 186 ? ? NH2 A ARG 186 ? ? 124.25 120.30 3.95 0.50 N 11 1 NE A ARG 224 ? ? CZ A ARG 224 ? ? NH1 A ARG 224 ? ? 124.29 120.30 3.99 0.50 N 12 1 NE A ARG 224 ? ? CZ A ARG 224 ? ? NH2 A ARG 224 ? ? 117.22 120.30 -3.08 0.50 N 13 1 CD1 A TYR 247 ? ? CE1 A TYR 247 ? ? CZ A TYR 247 ? ? 125.48 119.80 5.68 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 129 ? A 82.50 7.54 2 1 ARG A 129 ? B 89.73 -3.03 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 574 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.08 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id GLY _pdbx_unobs_or_zero_occ_residues.auth_seq_id 112 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id GLY _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 FRU 1 B FRU 1 A PDB 300 n B 2 GAL 2 B GAL 2 A PDB 300 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FRU 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DFrufb FRU 'COMMON NAME' GMML 1.0 b-D-fructofuranose FRU 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Fruf FRU 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fru GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGalpb1-4DFrufb2- 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/2,2,1/[ha122h-2b_2-5][a2112h-1b_1-5]/1-2/a4-b1' WURCS PDB2Glycan 1.1.0 3 2 '[][b-D-Fruf]{[(4+1)][b-D-Galp]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 GAL _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 FRU _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 FRU 1 n 2 GAL 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'CHLORIDE ION' CL 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #