HEADER PROTEIN BINDING 25-OCT-17 6BEA TITLE CRYSTAL STRUCTURE OF THE AUTOTRANSPORTER UPAB FROM E. COLI STRAIN TITLE 2 CFT073 COMPND MOL_ID: 1; COMPND 2 MOLECULE: AUTOTRANSPORTER PROTEIN UPAB; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 37-500; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI O6:H1; SOURCE 3 ORGANISM_TAXID: 199310; SOURCE 4 STRAIN: CFT073 / ATCC 700928 / UPEC; SOURCE 5 ATCC: 700928; SOURCE 6 GENE: C0426; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21 PLYSS; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS AUTOTRANSPORTER PROTEIN, BACTERIAL ADHESIN, VIRULENCE FACTOR, KEYWDS 2 FIBRONECTIN, GLYCOSAMINOGLYCAN, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR J.J.PAXMAN,B.HERAS REVDAT 5 13-MAR-24 6BEA 1 REMARK REVDAT 4 01-JAN-20 6BEA 1 REMARK REVDAT 3 15-MAY-19 6BEA 1 JRNL REVDAT 2 08-MAY-19 6BEA 1 JRNL REVDAT 1 10-APR-19 6BEA 0 JRNL AUTH J.J.PAXMAN,A.W.LO,M.J.SULLIVAN,S.PANJIKAR,M.KUIPER, JRNL AUTH 2 A.E.WHITTEN,G.WANG,C.H.LUAN,D.G.MORIEL,L.TAN,K.M.PETERS, JRNL AUTH 3 M.D.PHAN,C.L.GEE,G.C.ULETT,M.A.SCHEMBRI,B.HERAS JRNL TITL UNIQUE STRUCTURAL FEATURES OF A BACTERIAL AUTOTRANSPORTER JRNL TITL 2 ADHESIN SUGGEST MECHANISMS FOR INTERACTION WITH HOST JRNL TITL 3 MACROMOLECULES. JRNL REF NAT COMMUN V. 10 1967 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 31036849 JRNL DOI 10.1038/S41467-019-09814-6 REMARK 2 REMARK 2 RESOLUTION. 1.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.44 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 32811 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1667 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.4459 - 4.5026 0.99 2781 153 0.1880 0.1955 REMARK 3 2 4.5026 - 3.5746 1.00 2675 117 0.1438 0.2004 REMARK 3 3 3.5746 - 3.1229 1.00 2594 157 0.1565 0.1980 REMARK 3 4 3.1229 - 2.8375 1.00 2593 148 0.1625 0.2039 REMARK 3 5 2.8375 - 2.6341 1.00 2582 143 0.1746 0.2221 REMARK 3 6 2.6341 - 2.4788 1.00 2571 156 0.1817 0.2405 REMARK 3 7 2.4788 - 2.3547 1.00 2591 124 0.1884 0.2548 REMARK 3 8 2.3547 - 2.2522 1.00 2592 129 0.1861 0.2611 REMARK 3 9 2.2522 - 2.1655 1.00 2543 124 0.1939 0.2762 REMARK 3 10 2.1655 - 2.0908 1.00 2545 149 0.1972 0.2295 REMARK 3 11 2.0908 - 2.0254 1.00 2540 147 0.2110 0.2713 REMARK 3 12 2.0254 - 1.9675 0.99 2537 120 0.2179 0.2509 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.44 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.96 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3226 REMARK 3 ANGLE : 0.896 4388 REMARK 3 CHIRALITY : 0.061 537 REMARK 3 PLANARITY : 0.004 575 REMARK 3 DIHEDRAL : 3.854 2521 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 40 THROUGH 191 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.4056 44.7761 -13.2683 REMARK 3 T TENSOR REMARK 3 T11: 0.1633 T22: 0.2082 REMARK 3 T33: 0.1688 T12: 0.0277 REMARK 3 T13: -0.0144 T23: 0.0043 REMARK 3 L TENSOR REMARK 3 L11: 0.2358 L22: 0.5338 REMARK 3 L33: 0.5065 L12: 0.2718 REMARK 3 L13: -0.2647 L23: 0.3363 REMARK 3 S TENSOR REMARK 3 S11: -0.0986 S12: 0.0993 S13: 0.0186 REMARK 3 S21: -0.0408 S22: 0.0619 S23: 0.0462 REMARK 3 S31: -0.1031 S32: -0.0013 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 192 THROUGH 420 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.0592 56.0780 13.0803 REMARK 3 T TENSOR REMARK 3 T11: 0.1687 T22: 0.1900 REMARK 3 T33: 0.1795 T12: 0.0214 REMARK 3 T13: 0.0011 T23: 0.0184 REMARK 3 L TENSOR REMARK 3 L11: -0.0588 L22: 0.4700 REMARK 3 L33: 0.2819 L12: -0.0379 REMARK 3 L13: 0.0325 L23: -0.0858 REMARK 3 S TENSOR REMARK 3 S11: 0.0238 S12: 0.0132 S13: 0.0070 REMARK 3 S21: -0.0059 S22: -0.0400 S23: -0.0469 REMARK 3 S31: -0.0047 S32: 0.0207 S33: -0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 421 THROUGH 472 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.4310 52.3439 43.7111 REMARK 3 T TENSOR REMARK 3 T11: 0.3747 T22: 0.2222 REMARK 3 T33: 0.2466 T12: -0.0097 REMARK 3 T13: -0.0525 T23: 0.0199 REMARK 3 L TENSOR REMARK 3 L11: 0.1490 L22: 0.0124 REMARK 3 L33: 0.1092 L12: -0.0021 REMARK 3 L13: -0.0364 L23: 0.0017 REMARK 3 S TENSOR REMARK 3 S11: -0.0097 S12: -0.0433 S13: 0.0660 REMARK 3 S21: 0.2257 S22: -0.0202 S23: -0.0321 REMARK 3 S31: -0.0669 S32: 0.0823 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6BEA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1000230734. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32914 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.970 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.14000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.04 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.88100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: SHELXDE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE, 0.2 M AMMONIUM REMARK 280 SULFATE, 28% W/V PEG4000, PH 4.8, VAPOR DIFFUSION, TEMPERATURE REMARK 280 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.18933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 110.37867 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 110.37867 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 55.18933 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 35 REMARK 465 ASN A 36 REMARK 465 ALA A 37 REMARK 465 THR A 38 REMARK 465 ASP A 39 REMARK 465 HIS A 473 REMARK 465 LYS A 474 REMARK 465 ALA A 475 REMARK 465 SER A 476 REMARK 465 ASN A 477 REMARK 465 ALA A 478 REMARK 465 SER A 479 REMARK 465 SER A 480 REMARK 465 VAL A 481 REMARK 465 ILE A 482 REMARK 465 GLN A 483 REMARK 465 ALA A 484 REMARK 465 MET A 485 REMARK 465 ALA A 486 REMARK 465 ALA A 487 REMARK 465 ALA A 488 REMARK 465 PRO A 489 REMARK 465 ALA A 490 REMARK 465 ASN A 491 REMARK 465 VAL A 492 REMARK 465 ALA A 493 REMARK 465 ASN A 494 REMARK 465 LEU A 495 REMARK 465 GLN A 496 REMARK 465 ALA A 497 REMARK 465 ASP A 498 REMARK 465 THR A 499 REMARK 465 LEU A 500 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 110 ND2 REMARK 470 THR A 167 CG2 REMARK 470 ASN A 305 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 50 -167.00 -163.79 REMARK 500 LYS A 80 -147.73 -113.34 REMARK 500 ASN A 110 14.28 -140.27 REMARK 500 ASN A 154 105.32 -160.29 REMARK 500 ASN A 255 67.17 -150.04 REMARK 500 ASP A 440 28.89 49.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 P6G A 505 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P6G A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 510 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4KH3 RELATED DB: PDB REMARK 900 CONTAINS ANOTHER PROTEIN FROM THE AUTOTRANSPORTER FAMILY REMARK 900 RELATED ID: SASDC45 RELATED DB: SASBDB REMARK 900 CONTAINS 1 MOLECULE OF UPAB DBREF1 6BEA A 37 500 UNP A0A0H2V5A3_ECOL6 DBREF2 6BEA A A0A0H2V5A3 37 500 SEQADV 6BEA SER A 35 UNP A0A0H2V5A EXPRESSION TAG SEQADV 6BEA ASN A 36 UNP A0A0H2V5A EXPRESSION TAG SEQADV 6BEA THR A 94 UNP A0A0H2V5A ALA 94 CONFLICT SEQRES 1 A 466 SER ASN ALA THR ASP SER THR VAL SER THR ASP PRO VAL SEQRES 2 A 466 THR LEU ASN THR GLU LYS THR THR LEU ASP GLN ASP VAL SEQRES 3 A 466 VAL ILE ASN GLY ASP ASN LYS ILE THR ALA VAL THR ILE SEQRES 4 A 466 GLU THR SER ASP SER ASP LYS ASP LEU ASN VAL THR PHE SEQRES 5 A 466 GLY GLY HIS ASP ILE THR ALA THR SER THR VAL ASN GLN SEQRES 6 A 466 ASP PHE VAL GLU GLY VAL LYS VAL SER GLY ASN LYS ASN SEQRES 7 A 466 VAL VAL ILE ASN ALA THR ASP SER THR ILE THR ALA GLN SEQRES 8 A 466 GLY GLU GLY THR TYR VAL ARG THR ALA MET VAL ILE ASP SEQRES 9 A 466 SER THR GLY ASP VAL VAL VAL ASN GLY GLY ASN PHE VAL SEQRES 10 A 466 ALA LYS ASN GLU LYS GLY SER ALA THR GLY ILE SER LEU SEQRES 11 A 466 GLU ALA THR THR GLY ASN ASN LEU THR LEU ASN GLY THR SEQRES 12 A 466 THR ILE ASN ALA GLN GLY ASN LYS SER TYR SER ASN GLY SEQRES 13 A 466 SER THR ALA ILE PHE ALA GLN LYS GLY ASN LEU LEU GLN SEQRES 14 A 466 GLY PHE ASP GLY ASP ALA THR ASP ASN ILE THR LEU ALA SEQRES 15 A 466 ASP SER ASN ILE ILE ASN GLY GLY ILE GLU THR ILE VAL SEQRES 16 A 466 THR ALA GLY ASN LYS THR GLY ILE HIS THR VAL ASN LEU SEQRES 17 A 466 ASN ILE LYS ASP GLY SER VAL ILE GLY ALA ALA ASN ASN SEQRES 18 A 466 LYS GLN THR ILE TYR ALA SER ALA SER ALA GLN GLY ALA SEQRES 19 A 466 GLY SER ALA THR GLN ASN LEU ASN LEU SER VAL ALA ASP SEQRES 20 A 466 SER THR ILE TYR SER ASP VAL LEU ALA LEU SER GLU SER SEQRES 21 A 466 GLU ASN SER ALA SER THR THR THR ASN VAL ASN MET ASN SEQRES 22 A 466 VAL ALA ARG SER TYR TRP GLU GLY ASN ALA TYR THR PHE SEQRES 23 A 466 ASN SER GLY ASP LYS ALA GLY SER ASP LEU ASP ILE ASN SEQRES 24 A 466 LEU SER ASP SER SER VAL TRP LYS GLY LYS VAL SER GLY SEQRES 25 A 466 ALA GLY ASP ALA SER VAL SER LEU GLN ASN GLY SER VAL SEQRES 26 A 466 TRP ASN VAL THR GLY SER SER THR VAL ASP ALA LEU ALA SEQRES 27 A 466 VAL LYS ASP SER THR VAL ASN ILE THR LYS ALA THR VAL SEQRES 28 A 466 ASN THR GLY THR PHE ALA SER GLN ASN GLY THR LEU ILE SEQRES 29 A 466 VAL ASP ALA SER SER GLU ASN THR LEU ASP ILE SER GLY SEQRES 30 A 466 LYS ALA SER GLY ASP LEU ARG VAL TYR SER ALA GLY SER SEQRES 31 A 466 LEU ASP LEU ILE ASN GLU GLN THR ALA PHE ILE SER THR SEQRES 32 A 466 GLY LYS ASP SER THR LEU LYS ALA THR GLY THR THR GLU SEQRES 33 A 466 GLY GLY LEU TYR GLN TYR ASP LEU THR GLN GLY ALA ASP SEQRES 34 A 466 GLY ASN PHE TYR PHE VAL LYS ASN THR HIS LYS ALA SER SEQRES 35 A 466 ASN ALA SER SER VAL ILE GLN ALA MET ALA ALA ALA PRO SEQRES 36 A 466 ALA ASN VAL ALA ASN LEU GLN ALA ASP THR LEU HET GOL A 501 6 HET GOL A 502 6 HET GOL A 503 6 HET GOL A 504 6 HET P6G A 505 7 HET SO4 A 506 5 HET CA A 507 1 HET CL A 508 1 HET NA A 509 1 HET GOL A 510 6 HETNAM GOL GLYCEROL HETNAM P6G HEXAETHYLENE GLYCOL HETNAM SO4 SULFATE ION HETNAM CA CALCIUM ION HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN P6G POLYETHYLENE GLYCOL PEG400 FORMUL 2 GOL 5(C3 H8 O3) FORMUL 6 P6G C12 H26 O7 FORMUL 7 SO4 O4 S 2- FORMUL 8 CA CA 2+ FORMUL 9 CL CL 1- FORMUL 10 NA NA 1+ FORMUL 12 HOH *240(H2 O) SHEET 1 AA116 VAL A 42 SER A 43 0 SHEET 2 AA116 ASP A 59 GLY A 64 1 O ASP A 59 N SER A 43 SHEET 3 AA116 ILE A 91 SER A 95 1 O THR A 92 N ILE A 62 SHEET 4 AA116 THR A 121 GLN A 125 1 O THR A 123 N ILE A 91 SHEET 5 AA116 ASN A 149 LYS A 153 1 O VAL A 151 N ILE A 122 SHEET 6 AA116 THR A 178 GLN A 182 1 O THR A 178 N PHE A 150 SHEET 7 AA116 ASN A 219 ASN A 222 1 O ILE A 221 N ILE A 179 SHEET 8 AA116 VAL A 249 ILE A 250 1 O VAL A 249 N ILE A 220 SHEET 9 AA116 THR A 283 GLU A 295 1 O TYR A 285 N ILE A 250 SHEET 10 AA116 TYR A 312 GLU A 314 1 O GLU A 314 N ILE A 284 SHEET 11 AA116 VAL A 339 GLY A 342 1 O VAL A 339 N TRP A 313 SHEET 12 AA116 VAL A 359 VAL A 362 1 O ASN A 361 N TRP A 340 SHEET 13 AA116 THR A 377 ASN A 379 1 O ASN A 379 N TRP A 360 SHEET 14 AA116 VAL A 385 ILE A 398 1 O ILE A 398 N VAL A 378 SHEET 15 AA116 ALA A 413 TYR A 420 1 O ARG A 418 N LEU A 397 SHEET 16 AA116 LYS A 444 THR A 446 1 O THR A 446 N VAL A 419 SHEET 1 AA211 VAL A 47 LEU A 49 0 SHEET 2 AA211 ILE A 68 GLU A 74 1 O THR A 72 N LEU A 49 SHEET 3 AA211 VAL A 102 SER A 108 1 O LYS A 106 N ILE A 73 SHEET 4 AA211 ARG A 132 ILE A 137 1 O THR A 133 N VAL A 102 SHEET 5 AA211 ALA A 159 LEU A 164 1 O THR A 160 N ARG A 132 SHEET 6 AA211 SER A 191 LYS A 198 1 O PHE A 195 N ILE A 162 SHEET 7 AA211 GLY A 224 THR A 230 1 O THR A 230 N LYS A 198 SHEET 8 AA211 GLN A 257 GLN A 266 1 O TYR A 260 N ILE A 225 SHEET 9 AA211 THR A 283 GLU A 295 1 O ASP A 287 N ILE A 259 SHEET 10 AA211 ALA A 317 SER A 322 1 O SER A 322 N SER A 294 SHEET 11 AA211 VAL A 344 GLY A 346 1 O SER A 345 N ALA A 317 SHEET 1 AA317 LEU A 82 THR A 85 0 SHEET 2 AA317 VAL A 113 ASN A 116 1 O ASN A 116 N VAL A 84 SHEET 3 AA317 VAL A 143 ASN A 146 1 O VAL A 144 N ILE A 115 SHEET 4 AA317 ASN A 171 ASN A 175 1 O THR A 173 N VAL A 145 SHEET 5 AA317 GLY A 207 ALA A 216 1 O ASN A 212 N LEU A 172 SHEET 6 AA317 THR A 235 LYS A 245 1 O ASN A 243 N LEU A 215 SHEET 7 AA317 SER A 270 ALA A 280 1 O SER A 278 N ILE A 244 SHEET 8 AA317 SER A 299 ALA A 309 1 O ASN A 307 N VAL A 279 SHEET 9 AA317 ALA A 326 SER A 335 1 O ASP A 331 N MET A 306 SHEET 10 AA317 ASP A 349 LEU A 354 1 O SER A 351 N ILE A 332 SHEET 11 AA317 SER A 366 LYS A 374 1 O ASP A 369 N ALA A 350 SHEET 12 AA317 VAL A 385 ILE A 398 1 O ASN A 386 N SER A 366 SHEET 13 AA317 LEU A 407 ILE A 409 1 O ASP A 408 N VAL A 385 SHEET 14 AA317 ALA A 433 SER A 436 1 O SER A 436 N ILE A 409 SHEET 15 AA317 PHE A 466 ASN A 471 -1 O PHE A 466 N ILE A 435 SHEET 16 AA317 TYR A 454 GLN A 460 -1 N THR A 459 O TYR A 467 SHEET 17 AA317 THR A 448 GLY A 451 -1 N THR A 449 O TYR A 456 LINK OG1 THR A 54 NA NA A 509 1555 1555 2.68 SITE 1 AC1 6 PHE A 101 GLU A 103 VAL A 136 GLU A 165 SITE 2 AC1 6 HOH A 628 HOH A 703 SITE 1 AC2 6 THR A 177 ASP A 208 ASP A 217 SER A 218 SITE 2 AC2 6 ASN A 219 GLY A 247 SITE 1 AC3 5 ASP A 281 SER A 282 THR A 283 ARG A 310 SITE 2 AC3 5 P6G A 505 SITE 1 AC4 5 VAL A 97 ASN A 98 GLN A 99 HOH A 620 SITE 2 AC4 5 HOH A 686 SITE 1 AC5 5 ARG A 310 SER A 311 SER A 337 VAL A 339 SITE 2 AC5 5 GOL A 503 SITE 1 AC6 5 SER A 40 ASN A 361 LYS A 382 HOH A 726 SITE 2 AC6 5 HOH A 744 SITE 1 AC7 1 ASN A 316 SITE 1 AC8 3 GLY A 204 ASN A 233 LYS A 234 SITE 1 AC9 4 THR A 54 THR A 55 ASN A 83 THR A 85 SITE 1 AD1 4 LYS A 343 GLY A 364 SER A 365 HOH A 605 CRYST1 68.611 68.611 165.568 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014575 0.008415 0.000000 0.00000 SCALE2 0.000000 0.016830 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006040 0.00000