HEADER HYDROLASE, LIGASE/INHIBITOR 27-OCT-17 6BG3
TITLE STRUCTURE OF (3S,4S)-1-BENZYL-4-(3-(3-(TRIFLUOROMETHYL)PHENYL)UREIDO)
TITLE 2 PIPERIDIN-3-YL ACETATE BOUND TO DCN1
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: ENDOLYSIN, DCN1-LIKE PROTEIN 1 CHIMERA;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: PONY;
COMPND 5 SYNONYM: DCUN1 DOMAIN-CONTAINING PROTEIN 1,DEFECTIVE IN CULLIN
COMPND 6 NEDDYLATION PROTEIN 1-LIKE PROTEIN 1,SQUAMOUS CELL CARCINOMA-RELATED
COMPND 7 ONCOGENE,LYSIS PROTEIN,LYSOZYME,MURAMIDASE;
COMPND 8 EC: 3.2.1.17;
COMPND 9 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE T4, HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 10665, 9606;
SOURCE 5 GENE: E, DCUN1D1, DCUN1L1, RP42, SCCRO;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PRSF DUET
KEYWDS E3 LIGASE, HYDROLASE, LIGASE-INHIBITOR COMPLEX
EXPDTA X-RAY DIFFRACTION
AUTHOR R.K.GUY,B.A.SCHULMAN,D.C.SCOTT,J.T.HAMMILL
REVDAT 2 04-OCT-23 6BG3 1 REMARK
REVDAT 1 26-SEP-18 6BG3 0
JRNL AUTH J.T.HAMMILL,D.C.SCOTT,J.MIN,M.C.CONNELLY,G.HOLBROOK,F.ZHU,
JRNL AUTH 2 A.MATHENY,L.YANG,B.SINGH,B.A.SCHULMAN,R.K.GUY
JRNL TITL PIPERIDINYL UREAS CHEMICALLY CONTROL DEFECTIVE IN CULLIN
JRNL TITL 2 NEDDYLATION 1 (DCN1)-MEDIATED CULLIN NEDDYLATION.
JRNL REF J. MED. CHEM. V. 61 2680 2018
JRNL REFN ISSN 1520-4804
JRNL PMID 29547696
JRNL DOI 10.1021/ACS.JMEDCHEM.7B01277
REMARK 2
REMARK 2 RESOLUTION. 1.05 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX 1.9_1692
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : NULL
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.05
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.28
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350
REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9
REMARK 3 NUMBER OF REFLECTIONS : 176089
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.157
REMARK 3 R VALUE (WORKING SET) : 0.156
REMARK 3 FREE R VALUE : 0.174
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010
REMARK 3 FREE R VALUE TEST SET COUNT : 8825
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 49.3330 - 3.2609 0.98 5616 333 0.1564 0.1722
REMARK 3 2 3.2609 - 2.5883 0.99 5617 308 0.1578 0.1682
REMARK 3 3 2.5883 - 2.2612 1.00 5657 307 0.1540 0.1728
REMARK 3 4 2.2612 - 2.0544 0.99 5602 269 0.1509 0.1621
REMARK 3 5 2.0544 - 1.9072 0.99 5641 287 0.1511 0.1655
REMARK 3 6 1.9072 - 1.7947 0.99 5591 299 0.1544 0.1629
REMARK 3 7 1.7947 - 1.7048 0.99 5611 283 0.1557 0.1813
REMARK 3 8 1.7048 - 1.6306 0.99 5636 279 0.1448 0.1690
REMARK 3 9 1.6306 - 1.5678 0.99 5596 278 0.1446 0.1607
REMARK 3 10 1.5678 - 1.5137 0.99 5574 292 0.1435 0.1718
REMARK 3 11 1.5137 - 1.4664 0.99 5581 286 0.1399 0.1622
REMARK 3 12 1.4664 - 1.4245 0.99 5612 300 0.1484 0.1687
REMARK 3 13 1.4245 - 1.3870 0.99 5586 295 0.1480 0.1879
REMARK 3 14 1.3870 - 1.3531 0.99 5538 306 0.1469 0.1796
REMARK 3 15 1.3531 - 1.3224 0.99 5613 280 0.1490 0.1803
REMARK 3 16 1.3224 - 1.2942 0.99 5579 277 0.1473 0.1633
REMARK 3 17 1.2942 - 1.2683 0.99 5602 301 0.1527 0.1879
REMARK 3 18 1.2683 - 1.2444 0.99 5566 301 0.1514 0.1746
REMARK 3 19 1.2444 - 1.2222 0.99 5568 300 0.1549 0.1695
REMARK 3 20 1.2222 - 1.2015 0.99 5560 311 0.1514 0.1634
REMARK 3 21 1.2015 - 1.1821 0.99 5549 298 0.1513 0.1907
REMARK 3 22 1.1821 - 1.1639 0.99 5599 294 0.1543 0.1748
REMARK 3 23 1.1639 - 1.1468 0.99 5587 299 0.1626 0.1821
REMARK 3 24 1.1468 - 1.1306 0.99 5564 292 0.1748 0.2137
REMARK 3 25 1.1306 - 1.1153 0.99 5573 296 0.1818 0.2060
REMARK 3 26 1.1153 - 1.1008 0.99 5518 304 0.1927 0.2336
REMARK 3 27 1.1008 - 1.0871 0.99 5605 291 0.2101 0.2286
REMARK 3 28 1.0871 - 1.0740 0.98 5494 298 0.2382 0.2864
REMARK 3 29 1.0740 - 1.0615 0.98 5471 292 0.2550 0.2638
REMARK 3 30 1.0615 - 1.0496 0.94 5358 269 0.2898 0.2941
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : NULL
REMARK 3 SOLVENT RADIUS : 1.11
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.110
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.750
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.78
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : 0.011 3105
REMARK 3 ANGLE : 1.402 4202
REMARK 3 CHIRALITY : 0.187 448
REMARK 3 PLANARITY : 0.007 544
REMARK 3 DIHEDRAL : 12.732 1182
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : NULL
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 6BG3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-NOV-17.
REMARK 100 THE DEPOSITION ID IS D_1000230757.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 12-APR-14
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : NULL
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : APS
REMARK 200 BEAMLINE : 24-ID-C
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.97950
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000
REMARK 200 DATA SCALING SOFTWARE : HKL-2000
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 176138
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.050
REMARK 200 RESOLUTION RANGE LOW (A) : 50.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9
REMARK 200 DATA REDUNDANCY : 3.200
REMARK 200 R MERGE (I) : 0.03200
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.2000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.05
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.09
REMARK 200 COMPLETENESS FOR SHELL (%) : 97.2
REMARK 200 DATA REDUNDANCY IN SHELL : 2.90
REMARK 200 R MERGE FOR SHELL (I) : 0.53700
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: 2LZM, 3TDU
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 46.53
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 6% PEG3350, 0.2M NH4BR, EVAPORATION,
REMARK 280 TEMPERATURE 277K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 48.45750
REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A -21
REMARK 465 GLY A -20
REMARK 465 SER A -19
REMARK 465 SER A -18
REMARK 465 HIS A -17
REMARK 465 HIS A -16
REMARK 465 HIS A -15
REMARK 465 HIS A -14
REMARK 465 HIS A -13
REMARK 465 ILE A 1251
REMARK 465 ALA A 1252
REMARK 465 GLY A 1253
REMARK 465 THR A 1254
REMARK 465 LYS A 1255
REMARK 465 SER A 1256
REMARK 465 THR A 1257
REMARK 465 THR A 1258
REMARK 465 VAL A 1259
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 HIS A -12 CG ND1 CD2 CE1 NE2
REMARK 470 LYS A 35 CG CD CE NZ
REMARK 470 LYS A 48 CG CD CE NZ
REMARK 470 GLN A1120 CG CD OE1 NE2
REMARK 470 ARG A1206 CG CD NE CZ NH1 NH2
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 HH21 ARG A 1110 O HOH A 1409 1.39
REMARK 500 O HOH A 1445 O HOH A 1511 1.83
REMARK 500 O HOH A 1409 O HOH A 1437 1.85
REMARK 500 O HOH A 1963 O HOH A 2005 1.85
REMARK 500 O HOH A 1909 O HOH A 1975 1.87
REMARK 500 O HOH A 1797 O HOH A 1954 1.89
REMARK 500 O HOH A 1421 O HOH A 1755 1.91
REMARK 500 O HOH A 1416 O HOH A 1678 1.96
REMARK 500 O PRO A 1249 O HOH A 1401 1.97
REMARK 500 OE1 GLU A 45 O HOH A 1402 1.99
REMARK 500 O HOH A 1822 O HOH A 1852 1.99
REMARK 500 O HOH A 1529 O HOH A 1931 2.00
REMARK 500 OE1 GLU A 1066 O HOH A 1403 2.03
REMARK 500 O HOH A 1976 O HOH A 2037 2.03
REMARK 500 O HOH A 1419 O HOH A 1842 2.04
REMARK 500 O HOH A 1724 O HOH A 1753 2.04
REMARK 500 O HOH A 1613 O HOH A 1697 2.05
REMARK 500 O HOH A 1413 O HOH A 1729 2.05
REMARK 500 O HOH A 1786 O HOH A 1866 2.05
REMARK 500 O HOH A 1406 O HOH A 1916 2.07
REMARK 500 O HOH A 2025 O HOH A 2067 2.08
REMARK 500 OD2 ASP A 1211 O HOH A 1404 2.09
REMARK 500 O HOH A 1422 O HOH A 1816 2.12
REMARK 500 O HOH A 1806 O HOH A 1848 2.12
REMARK 500 O HOH A 1743 O HOH A 1859 2.12
REMARK 500 O HOH A 1629 O HOH A 1764 2.13
REMARK 500 O HOH A 1642 O HOH A 2001 2.14
REMARK 500 O HOH A 1448 O HOH A 1864 2.15
REMARK 500 O HOH A 1833 O HOH A 1942 2.15
REMARK 500 OG1 THR A 1113 O HOH A 1405 2.16
REMARK 500 O HOH A 1622 O HOH A 1758 2.18
REMARK 500 O GLN A 1250 O HOH A 1406 2.18
REMARK 500 O HOH A 1751 O HOH A 1821 2.18
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375
REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.
REMARK 500
REMARK 500 DISTANCE CUTOFF:
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE
REMARK 500 O HOH A 1963 O HOH A 2045 2555 2.18
REMARK 500 O HOH A 1847 O HOH A 2050 1655 2.18
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ASP A 20 -166.35 -76.30
REMARK 500 LYS A1205 124.58 -32.64
REMARK 500 MET A1227 18.03 55.87
REMARK 500
REMARK 500 REMARK: NULL
REMARK 525
REMARK 525 SOLVENT
REMARK 525
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE
REMARK 525 NUMBER; I=INSERTION CODE):
REMARK 525
REMARK 525 M RES CSSEQI
REMARK 525 HOH A2067 DISTANCE = 5.82 ANGSTROMS
REMARK 525 HOH A2068 DISTANCE = 5.84 ANGSTROMS
REMARK 525 HOH A2069 DISTANCE = 6.10 ANGSTROMS
REMARK 525 HOH A2070 DISTANCE = 6.11 ANGSTROMS
REMARK 525 HOH A2071 DISTANCE = 6.19 ANGSTROMS
REMARK 525 HOH A2072 DISTANCE = 6.25 ANGSTROMS
REMARK 525 HOH A2073 DISTANCE = 6.46 ANGSTROMS
REMARK 525 HOH A2074 DISTANCE = 6.48 ANGSTROMS
REMARK 525 HOH A2075 DISTANCE = 6.59 ANGSTROMS
REMARK 525 HOH A2076 DISTANCE = 6.83 ANGSTROMS
REMARK 525 HOH A2077 DISTANCE = 7.91 ANGSTROMS
REMARK 525 HOH A2078 DISTANCE = 8.80 ANGSTROMS
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue DOJ A 1301
DBREF 6BG3 A 1 164 UNP P00720 ENLYS_BPT4 1 164
DBREF 6BG3 A 1062 1259 UNP Q96GG9 DCNL1_HUMAN 62 259
SEQADV 6BG3 MET A -21 UNP P00720 INITIATING METHIONINE
SEQADV 6BG3 GLY A -20 UNP P00720 EXPRESSION TAG
SEQADV 6BG3 SER A -19 UNP P00720 EXPRESSION TAG
SEQADV 6BG3 SER A -18 UNP P00720 EXPRESSION TAG
SEQADV 6BG3 HIS A -17 UNP P00720 EXPRESSION TAG
SEQADV 6BG3 HIS A -16 UNP P00720 EXPRESSION TAG
SEQADV 6BG3 HIS A -15 UNP P00720 EXPRESSION TAG
SEQADV 6BG3 HIS A -14 UNP P00720 EXPRESSION TAG
SEQADV 6BG3 HIS A -13 UNP P00720 EXPRESSION TAG
SEQADV 6BG3 HIS A -12 UNP P00720 EXPRESSION TAG
SEQADV 6BG3 SER A -11 UNP P00720 EXPRESSION TAG
SEQADV 6BG3 GLN A -10 UNP P00720 EXPRESSION TAG
SEQADV 6BG3 ASP A -9 UNP P00720 EXPRESSION TAG
SEQADV 6BG3 LEU A -8 UNP P00720 EXPRESSION TAG
SEQADV 6BG3 GLU A -7 UNP P00720 EXPRESSION TAG
SEQADV 6BG3 ASN A -6 UNP P00720 EXPRESSION TAG
SEQADV 6BG3 LEU A -5 UNP P00720 EXPRESSION TAG
SEQADV 6BG3 TYR A -4 UNP P00720 EXPRESSION TAG
SEQADV 6BG3 PHE A -3 UNP P00720 EXPRESSION TAG
SEQADV 6BG3 GLN A -2 UNP P00720 EXPRESSION TAG
SEQADV 6BG3 GLY A -1 UNP P00720 EXPRESSION TAG
SEQADV 6BG3 SER A 0 UNP P00720 EXPRESSION TAG
SEQADV 6BG3 GLY A 12 UNP P00720 ARG 12 CONFLICT
SEQADV 6BG3 THR A 54 UNP P00720 CYS 54 CONFLICT
SEQADV 6BG3 ALA A 97 UNP P00720 CYS 97 CONFLICT
SEQADV 6BG3 ARG A 137 UNP P00720 ILE 137 CONFLICT
SEQADV 6BG3 THR A 146 UNP P00720 ALA 146 CONFLICT
SEQRES 1 A 384 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP
SEQRES 2 A 384 LEU GLU ASN LEU TYR PHE GLN GLY SER MET ASN ILE PHE
SEQRES 3 A 384 GLU MET LEU ARG ILE ASP GLU GLY LEU ARG LEU LYS ILE
SEQRES 4 A 384 TYR LYS ASP THR GLU GLY TYR TYR THR ILE GLY ILE GLY
SEQRES 5 A 384 HIS LEU LEU THR LYS SER PRO SER LEU ASN ALA ALA LYS
SEQRES 6 A 384 SER GLU LEU ASP LYS ALA ILE GLY ARG ASN THR ASN GLY
SEQRES 7 A 384 VAL ILE THR LYS ASP GLU ALA GLU LYS LEU PHE ASN GLN
SEQRES 8 A 384 ASP VAL ASP ALA ALA VAL ARG GLY ILE LEU ARG ASN ALA
SEQRES 9 A 384 LYS LEU LYS PRO VAL TYR ASP SER LEU ASP ALA VAL ARG
SEQRES 10 A 384 ARG ALA ALA LEU ILE ASN MET VAL PHE GLN MET GLY GLU
SEQRES 11 A 384 THR GLY VAL ALA GLY PHE THR ASN SER LEU ARG MET LEU
SEQRES 12 A 384 GLN GLN LYS ARG TRP ASP GLU ALA ALA VAL ASN LEU ALA
SEQRES 13 A 384 LYS SER ARG TRP TYR ASN GLN THR PRO ASN ARG THR LYS
SEQRES 14 A 384 ARG VAL ILE THR THR PHE ARG THR GLY THR TRP ASP ALA
SEQRES 15 A 384 TYR LYS ASN LEU ARG LYS LYS LEU GLU GLN LEU TYR ASN
SEQRES 16 A 384 ARG TYR LYS ASP PRO GLN ASP GLU ASN LYS ILE GLY ILE
SEQRES 17 A 384 ASP GLY ILE GLN GLN PHE CYS ASP ASP LEU ALA LEU ASP
SEQRES 18 A 384 PRO ALA SER ILE SER VAL LEU ILE ILE ALA TRP LYS PHE
SEQRES 19 A 384 ARG ALA ALA THR GLN CYS GLU PHE SER LYS GLN GLU PHE
SEQRES 20 A 384 MET ASP GLY MET THR GLU LEU GLY CYS ASP SER ILE GLU
SEQRES 21 A 384 LYS LEU LYS ALA GLN ILE PRO LYS MET GLU GLN GLU LEU
SEQRES 22 A 384 LYS GLU PRO GLY ARG PHE LYS ASP PHE TYR GLN PHE THR
SEQRES 23 A 384 PHE ASN PHE ALA LYS ASN PRO GLY GLN LYS GLY LEU ASP
SEQRES 24 A 384 LEU GLU MET ALA ILE ALA TYR TRP ASN LEU VAL LEU ASN
SEQRES 25 A 384 GLY ARG PHE LYS PHE LEU ASP LEU TRP ASN LYS PHE LEU
SEQRES 26 A 384 LEU GLU HIS HIS LYS ARG SER ILE PRO LYS ASP THR TRP
SEQRES 27 A 384 ASN LEU LEU LEU ASP PHE SER THR MET ILE ALA ASP ASP
SEQRES 28 A 384 MET SER ASN TYR ASP GLU GLU GLY ALA TRP PRO VAL LEU
SEQRES 29 A 384 ILE ASP ASP PHE VAL GLU PHE ALA ARG PRO GLN ILE ALA
SEQRES 30 A 384 GLY THR LYS SER THR THR VAL
HET DOJ A1301 57
HETNAM DOJ N-{(3S,4S)-1-BENZYL-3-[(1S)-1-HYDROXYETHOXY]PIPERIDIN-
HETNAM 2 DOJ 4-YL}-N'-[3-(TRIFLUOROMETHYL)PHENYL]UREA
FORMUL 2 DOJ C22 H26 F3 N3 O3
FORMUL 3 HOH *678(H2 O)
HELIX 1 AA1 ASP A -9 TYR A -4 5 6
HELIX 2 AA2 ASN A 2 GLU A 11 1 10
HELIX 3 AA3 SER A 38 GLY A 51 1 14
HELIX 4 AA4 THR A 59 ARG A 80 1 22
HELIX 5 AA5 LYS A 83 LEU A 91 1 9
HELIX 6 AA6 ASP A 92 GLY A 113 1 22
HELIX 7 AA7 PHE A 114 GLN A 123 1 10
HELIX 8 AA8 ARG A 125 LYS A 135 1 11
HELIX 9 AA9 SER A 136 THR A 142 1 7
HELIX 10 AB1 THR A 142 GLY A 156 1 15
HELIX 11 AB2 TRP A 158 TYR A 1072 1 18
HELIX 12 AB3 GLY A 1082 LEU A 1093 1 12
HELIX 13 AB4 SER A 1099 PHE A 1109 1 11
HELIX 14 AB5 LYS A 1119 LEU A 1129 1 11
HELIX 15 AB6 SER A 1133 LEU A 1148 1 16
HELIX 16 AB7 GLY A 1152 LYS A 1166 1 15
HELIX 17 AB8 LEU A 1175 ASN A 1187 1 13
HELIX 18 AB9 PHE A 1192 HIS A 1203 1 12
HELIX 19 AC1 PRO A 1209 ILE A 1223 1 15
HELIX 20 AC2 PRO A 1237 ARG A 1248 1 12
SHEET 1 AA1 3 ARG A 14 LYS A 19 0
SHEET 2 AA1 3 TYR A 25 GLY A 28 -1 O THR A 26 N TYR A 18
SHEET 3 AA1 3 HIS A 31 THR A 34 -1 O LEU A 33 N TYR A 25
SHEET 1 AA2 3 LYS A1073 ASP A1074 0
SHEET 2 AA2 3 ASP A1077 ILE A1081 -1 O LYS A1080 N ASP A1074
SHEET 3 AA2 3 PHE A1117 SER A1118 -1 O PHE A1117 N ILE A1081
SHEET 1 AA3 2 LEU A1173 ASP A1174 0
SHEET 2 AA3 2 SER A1207 ILE A1208 -1 O ILE A1208 N LEU A1173
SITE 1 AC1 16 ILE A1083 ILE A1086 PHE A1089 PRO A1097
SITE 2 AC1 16 VAL A1102 ILE A1105 ALA A1106 ALA A1111
SITE 3 AC1 16 THR A1113 GLN A1114 GLU A1116 PHE A1117
SITE 4 AC1 16 ALA A1180 TYR A1181 HOH A1482 HOH A1558
CRYST1 35.169 96.915 59.388 90.00 105.50 90.00 P 1 21 1 2
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.028434 0.000000 0.007884 0.00000
SCALE2 0.000000 0.010318 0.000000 0.00000
SCALE3 0.000000 0.000000 0.017474 0.00000