HEADER    OXIDOREDUCTASE/INHIBITOR                29-OCT-17   6BGU              
TITLE     LINKED KDM5A JMJ DOMAIN BOUND TO THE INHIBITOR 2-((2-CHLOROPHENYL)    
TITLE    2 (PROPOXY)METHYL)-1H-PYRROLO[3,2-B]PYRIDINE (COMPOUND N9)             
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: LYSINE-SPECIFIC DEMETHYLASE 5A, LINKED KDM5A JMJ DOMAIN;   
COMPND   3 CHAIN: A;                                                            
COMPND   4 SYNONYM: HISTONE DEMETHYLASE JARID1A,JUMONJI/ARID DOMAIN-CONTAINING  
COMPND   5 PROTEIN 1A,RETINOBLASTOMA-BINDING PROTEIN 2,RBBP-2;                  
COMPND   6 EC: 1.14.11.-;                                                       
COMPND   7 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: KDM5A, JARID1A, RBBP2, RBP2;                                   
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);                                 
SOURCE   9 EXPRESSION_SYSTEM_VARIANT: GOLD C-PLUS                               
KEYWDS    DEMETHYLASE INHIBITION, OXIDOREDUCTASE-OXIDOREDUCTASE INHIBITOR       
KEYWDS   2 COMPLEX, OXIDOREDUCTASE-INHIBITOR COMPLEX                            
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    J.R.HORTON,X.CHENG                                                    
REVDAT   4   04-OCT-23 6BGU    1       LINK                                     
REVDAT   3   01-JAN-20 6BGU    1       REMARK                                   
REVDAT   2   25-APR-18 6BGU    1       JRNL                                     
REVDAT   1   28-MAR-18 6BGU    0                                                
JRNL        AUTH   J.R.HORTON,X.LIU,L.WU,K.ZHANG,J.SHANKS,X.ZHANG,G.RAI,        
JRNL        AUTH 2 B.T.MOTT,D.J.JANSEN,S.C.KALES,M.J.HENDERSON,K.POHIDA,Y.FANG, 
JRNL        AUTH 3 X.HU,A.JADHAV,D.J.MALONEY,M.D.HALL,A.SIMEONOV,H.FU,          
JRNL        AUTH 4 P.M.VERTINO,Q.YAN,X.CHENG                                    
JRNL        TITL   INSIGHTS INTO THE ACTION OF INHIBITOR ENANTIOMERS AGAINST    
JRNL        TITL 2 HISTONE LYSINE DEMETHYLASE 5A.                               
JRNL        REF    J. MED. CHEM.                 V.  61  3193 2018              
JRNL        REFN                   ISSN 1520-4804                               
JRNL        PMID   29537847                                                     
JRNL        DOI    10.1021/ACS.JMEDCHEM.8B00261                                 
REMARK   1                                                                      
REMARK   1 REFERENCE 1                                                          
REMARK   1  AUTH   J.R.HORTON,X.LIU,M.GALE,L.WU,J.R.SHANKS,X.ZHANG,P.J.WEBBER,  
REMARK   1  AUTH 2 J.S.BELL,S.C.KALES,B.T.MOTT,G.RAI,D.J.JANSEN,M.J.HENDERSON,  
REMARK   1  AUTH 3 D.J.URBAN,M.D.HALL,A.SIMEONOV,D.J.MALONEY,M.A.JOHNS,H.FU,    
REMARK   1  AUTH 4 A.JADHAV,P.M.VERTINO,Q.YAN,X.CHENG                           
REMARK   1  TITL   STRUCTURAL BASIS FOR KDM5A HISTONE LYSINE DEMETHYLASE        
REMARK   1  TITL 2 INHIBITION BY DIVERSE COMPOUNDS.                             
REMARK   1  REF    CELL CHEM BIOL                V.  23   769 2016              
REMARK   1  REFN                   ESSN 2451-9456                               
REMARK   1  PMID   27427228                                                     
REMARK   1  DOI    10.1016/J.CHEMBIOL.2016.06.006                               
REMARK   1 REFERENCE 2                                                          
REMARK   1  AUTH   J.R.HORTON,A.ENGSTROM,E.L.ZOELLER,X.LIU,J.R.SHANKS,X.ZHANG,  
REMARK   1  AUTH 2 M.A.JOHNS,P.M.VERTINO,H.FU,X.CHENG                           
REMARK   1  TITL   CHARACTERIZATION OF A LINKED JUMONJI DOMAIN OF THE           
REMARK   1  TITL 2 KDM5/JARID1 FAMILY OF HISTONE H3 LYSINE 4 DEMETHYLASES.      
REMARK   1  REF    J. BIOL. CHEM.                V. 291  2631 2016              
REMARK   1  REFN                   ESSN 1083-351X                               
REMARK   1  PMID   26645689                                                     
REMARK   1  DOI    10.1074/JBC.M115.698449                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.68 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX DEV_2863                                      
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : NULL                                          
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.68                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 32.91                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 1.360                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 98.9                           
REMARK   3   NUMBER OF REFLECTIONS             : 37326                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.198                           
REMARK   3   R VALUE            (WORKING SET) : 0.198                           
REMARK   3   FREE R VALUE                     : 0.208                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 4.990                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1862                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 32.9167 -  3.9575    1.00     2841   143  0.1726 0.1836        
REMARK   3     2  3.9575 -  3.1420    1.00     2763   149  0.1668 0.1835        
REMARK   3     3  3.1420 -  2.7450    1.00     2750   148  0.1907 0.2020        
REMARK   3     4  2.7450 -  2.4942    1.00     2772   150  0.2046 0.2125        
REMARK   3     5  2.4942 -  2.3154    1.00     2772   139  0.2120 0.2266        
REMARK   3     6  2.3154 -  2.1790    1.00     2756   142  0.2070 0.2153        
REMARK   3     7  2.1790 -  2.0698    1.00     2735   144  0.2111 0.2134        
REMARK   3     8  2.0698 -  1.9798    1.00     2752   140  0.2157 0.2138        
REMARK   3     9  1.9798 -  1.9035    1.00     2742   139  0.2274 0.2339        
REMARK   3    10  1.9035 -  1.8379    1.00     2742   153  0.2331 0.2692        
REMARK   3    11  1.8379 -  1.7804    1.00     2732   145  0.2363 0.2184        
REMARK   3    12  1.7804 -  1.7295    1.00     2721   141  0.2480 0.2870        
REMARK   3    13  1.7295 -  1.6840    0.86     2386   129  0.2650 0.2447        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : NULL                                          
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.140            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.310           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.002           2594                                  
REMARK   3   ANGLE     :  0.498           3539                                  
REMARK   3   CHIRALITY :  0.042            364                                  
REMARK   3   PLANARITY :  0.004            460                                  
REMARK   3   DIHEDRAL  : 15.050           1497                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : 4                                          
REMARK   3   TLS GROUP : 1                                                      
REMARK   3    SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 62 )                   
REMARK   3    ORIGIN FOR THE GROUP (A): -15.1158   4.5143   6.5387              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.1379 T22:   0.1494                                     
REMARK   3      T33:   0.1778 T12:   0.0169                                     
REMARK   3      T13:  -0.0210 T23:   0.0045                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   2.7438 L22:   3.0894                                     
REMARK   3      L33:   2.5308 L12:   0.8730                                     
REMARK   3      L13:   0.9596 L23:   0.8901                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.0313 S12:   0.1360 S13:  -0.3262                       
REMARK   3      S21:   0.0624 S22:   0.1227 S23:  -0.3919                       
REMARK   3      S31:   0.0832 S32:   0.4802 S33:  -0.1566                       
REMARK   3   TLS GROUP : 2                                                      
REMARK   3    SELECTION: CHAIN 'A' AND (RESID 63 THROUGH 359 )                  
REMARK   3    ORIGIN FOR THE GROUP (A): -32.4718  31.0490  12.5207              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.3492 T22:   0.2452                                     
REMARK   3      T33:   0.2514 T12:   0.0678                                     
REMARK   3      T13:  -0.0267 T23:  -0.0005                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   6.6903 L22:   3.3849                                     
REMARK   3      L33:   3.1638 L12:  -0.9454                                     
REMARK   3      L13:  -0.3487 L23:  -0.0489                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:  -0.3518 S12:  -0.2111 S13:   1.0433                       
REMARK   3      S21:  -0.0473 S22:   0.1038 S23:   0.3972                       
REMARK   3      S31:  -0.7149 S32:  -0.5366 S33:   0.1908                       
REMARK   3   TLS GROUP : 3                                                      
REMARK   3    SELECTION: CHAIN 'A' AND (RESID 360 THROUGH 507 )                 
REMARK   3    ORIGIN FOR THE GROUP (A): -20.1956  19.5749  10.4358              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.1550 T22:   0.0917                                     
REMARK   3      T33:   0.1137 T12:  -0.0207                                     
REMARK   3      T13:  -0.0048 T23:   0.0163                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   1.3410 L22:   1.4100                                     
REMARK   3      L33:   1.8766 L12:  -0.2725                                     
REMARK   3      L13:   0.1731 L23:   0.4940                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:  -0.0205 S12:   0.0162 S13:   0.1491                       
REMARK   3      S21:   0.0282 S22:   0.0578 S23:  -0.1075                       
REMARK   3      S31:  -0.2168 S32:   0.2006 S33:  -0.0278                       
REMARK   3   TLS GROUP : 4                                                      
REMARK   3    SELECTION: CHAIN 'A' AND (RESID 508 THROUGH 588 )                 
REMARK   3    ORIGIN FOR THE GROUP (A): -30.3550  13.4406   2.1641              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.1028 T22:   0.0982                                     
REMARK   3      T33:   0.0962 T12:   0.0009                                     
REMARK   3      T13:   0.0170 T23:   0.0001                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   1.8230 L22:   2.3372                                     
REMARK   3      L33:   2.7380 L12:   0.0773                                     
REMARK   3      L13:   0.3576 L23:   0.2036                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.0289 S12:   0.1401 S13:  -0.0765                       
REMARK   3      S21:  -0.1039 S22:  -0.0105 S23:   0.2326                       
REMARK   3      S31:  -0.0174 S32:  -0.2447 S33:  -0.0121                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 6BGU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-OCT-17.                  
REMARK 100 THE DEPOSITION ID IS D_1000230636.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 11-MAR-16                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 8.6-9.2                            
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : APS                                
REMARK 200  BEAMLINE                       : 22-ID                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.00000                            
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : RAYONIX MX300-HS                   
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : HKL-2000                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 37329                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.680                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 32.910                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 100.0                              
REMARK 200  DATA REDUNDANCY                : 11.00                              
REMARK 200  R MERGE                    (I) : 0.14300                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 17.1000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.68                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.75                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 100.0                              
REMARK 200  DATA REDUNDANCY IN SHELL       : 10.00                              
REMARK 200  R MERGE FOR SHELL          (I) : 0.85700                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 4.000                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHENIX                                                
REMARK 200 STARTING MODEL: 5E6H                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 44.63                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 1.2-1.35 M (NH4)2SO4, 0.1 M TRIS-HCL     
REMARK 280  (PH 8.6-9.2), 0-20% GLYCEROL, 25 MM (NA/K) DIBASIC/MONOBASIC        
REMARK 280  PHOSPHATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K          
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1                          
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y,-Z                                                 
REMARK 290       3555   X+1/2,Y+1/2,Z                                           
REMARK 290       4555   -X+1/2,Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   3  1.000000  0.000000  0.000000       58.26500            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       31.04200            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000       58.26500            
REMARK 290   SMTRY2   4  0.000000  1.000000  0.000000       31.04200            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     HIS A    -1                                                      
REMARK 465     ASN A     0                                                      
REMARK 465     MET A     1                                                      
REMARK 465     ALA A     2                                                      
REMARK 465     GLY A     3                                                      
REMARK 465     VAL A     4                                                      
REMARK 465     GLY A     5                                                      
REMARK 465     PRO A     6                                                      
REMARK 465     GLY A     7                                                      
REMARK 465     GLY A     8                                                      
REMARK 465     TYR A     9                                                      
REMARK 465     ALA A    10                                                      
REMARK 465     ARG A   345                                                      
REMARK 465     VAL A   346                                                      
REMARK 465     ARG A   347                                                      
REMARK 465     VAL A   461                                                      
REMARK 465     ASP A   462                                                      
REMARK 465     ILE A   463                                                      
REMARK 465     SER A   464                                                      
REMARK 465     GLY A   465                                                      
REMARK 465     MET A   466                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     GLU A  12    CG   CD   OE1  OE2                                  
REMARK 470     GLU A  27    CG   CD   OE1  OE2                                  
REMARK 470     LYS A  55    CG   CD   CE   NZ                                   
REMARK 470     GLU A  64    CG   CD   OE1  OE2                                  
REMARK 470     LYS A  66    CG   CD   CE   NZ                                   
REMARK 470     ARG A  69    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     GLU A  81    CG   CD   OE1  OE2                                  
REMARK 470     THR A  84    OG1  CG2                                            
REMARK 470     ARG A 349    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     GLU A 350    CG   CD   OE1  OE2                                  
REMARK 470     VAL A 358    CG1  CG2                                            
REMARK 470     GLU A 360    CG   CD   OE1  OE2                                  
REMARK 470     ILE A 401    CG1  CG2  CD1                                       
REMARK 470     GLU A 402    CG   CD   OE1  OE2                                  
REMARK 470     LYS A 416    CG   CD   CE   NZ                                   
REMARK 470     ASP A 417    CG   OD1  OD2                                       
REMARK 470     ARG A 428    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     LYS A 430    CG   CD   CE   NZ                                   
REMARK 470     GLU A 452    CG   CD   OE1  OE2                                  
REMARK 470     LYS A 467    CG   CD   CE   NZ                                   
REMARK 470     ARG A 519    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     GLU A 524    CG   CD   OE1  OE2                                  
REMARK 470     GLU A 527    CG   CD   OE1  OE2                                  
REMARK 470     LEU A 532    CG   CD1  CD2                                       
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    PHE A 477       -8.76     82.23                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MN A 602  MN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 HIS A 483   NE2                                                    
REMARK 620 2 GLU A 485   OE2  98.6                                              
REMARK 620 3 HIS A 571   NE2  85.1  87.3                                        
REMARK 620 4 DKP A 601   N16  91.2 167.0 102.1                                  
REMARK 620 5 HOH A 734   O    93.6  81.5 168.5  89.4                            
REMARK 620 6 HOH A 816   O   175.5  85.1  97.6  84.8  84.4                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue DKP A 601                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 602                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 603                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 604                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 605                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC6                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 606                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC7                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 607                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC8                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 608                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC9                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 609                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AD1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 610                 
DBREF  6BGU A    1   347  UNP    P29375   KDM5A_HUMAN      1     87             
DBREF  6BGU A  348   588  UNP    P29375   KDM5A_HUMAN    348    588             
SEQADV 6BGU HIS A   -1  UNP  P29375              EXPRESSION TAG                 
SEQADV 6BGU ASN A    0  UNP  P29375              EXPRESSION TAG                 
SEQRES   1 A  330  HIS ASN MET ALA GLY VAL GLY PRO GLY GLY TYR ALA ALA          
SEQRES   2 A  330  GLU PHE VAL PRO PRO PRO GLU CYS PRO VAL PHE GLU PRO          
SEQRES   3 A  330  SER TRP GLU GLU PHE THR ASP PRO LEU SER PHE ILE GLY          
SEQRES   4 A  330  ARG ILE ARG PRO LEU ALA GLU LYS THR GLY ILE CYS LYS          
SEQRES   5 A  330  ILE ARG PRO PRO LYS ASP TRP GLN PRO PRO PHE ALA CYS          
SEQRES   6 A  330  GLU VAL LYS SER PHE ARG PHE THR PRO ARG VAL GLN ARG          
SEQRES   7 A  330  LEU ASN GLU LEU GLU ALA MET THR ARG VAL ARG PRO ARG          
SEQRES   8 A  330  GLU ALA PHE GLY PHE GLU GLN ALA VAL ARG GLU TYR THR          
SEQRES   9 A  330  LEU GLN SER PHE GLY GLU MET ALA ASP ASN PHE LYS SER          
SEQRES  10 A  330  ASP TYR PHE ASN MET PRO VAL HIS MET VAL PRO THR GLU          
SEQRES  11 A  330  LEU VAL GLU LYS GLU PHE TRP ARG LEU VAL SER SER ILE          
SEQRES  12 A  330  GLU GLU ASP VAL ILE VAL GLU TYR GLY ALA ASP ILE SER          
SEQRES  13 A  330  SER LYS ASP PHE GLY SER GLY PHE PRO VAL LYS ASP GLY          
SEQRES  14 A  330  ARG ARG LYS ILE LEU PRO GLU GLU GLU GLU TYR ALA LEU          
SEQRES  15 A  330  SER GLY TRP ASN LEU ASN ASN MET PRO VAL LEU GLU GLN          
SEQRES  16 A  330  SER VAL LEU ALA HIS ILE ASN VAL ASP ILE SER GLY MET          
SEQRES  17 A  330  LYS VAL PRO TRP LEU TYR VAL GLY MET CYS PHE SER SER          
SEQRES  18 A  330  PHE CYS TRP HIS ILE GLU ASP HIS TRP SER TYR SER ILE          
SEQRES  19 A  330  ASN TYR LEU HIS TRP GLY GLU PRO LYS THR TRP TYR GLY          
SEQRES  20 A  330  VAL PRO SER HIS ALA ALA GLU GLN LEU GLU GLU VAL MET          
SEQRES  21 A  330  ARG GLU LEU ALA PRO GLU LEU PHE GLU SER GLN PRO ASP          
SEQRES  22 A  330  LEU LEU HIS GLN LEU VAL THR ILE MET ASN PRO ASN VAL          
SEQRES  23 A  330  LEU MET GLU HIS GLY VAL PRO VAL TYR ARG THR ASN GLN          
SEQRES  24 A  330  CYS ALA GLY GLU PHE VAL VAL THR PHE PRO ARG ALA TYR          
SEQRES  25 A  330  HIS SER GLY PHE ASN GLN GLY TYR ASN PHE ALA GLU ALA          
SEQRES  26 A  330  VAL ASN PHE CYS THR                                          
HET    DKP  A 601      24                                                       
HET     MN  A 602       1                                                       
HET    DMS  A 603       4                                                       
HET    GOL  A 604       6                                                       
HET    GOL  A 605       6                                                       
HET    EDO  A 606       4                                                       
HET    EDO  A 607       4                                                       
HET    EDO  A 608       4                                                       
HET    EDO  A 609       4                                                       
HET    SO4  A 610       5                                                       
HETNAM     DKP 2-[(R)-(2-CHLOROPHENYL)(PROPOXY)METHYL]-1H-PYRROLO[3,2-          
HETNAM   2 DKP  B]PYRIDINE-7-CARBOXYLIC ACID                                    
HETNAM      MN MANGANESE (II) ION                                               
HETNAM     DMS DIMETHYL SULFOXIDE                                               
HETNAM     GOL GLYCEROL                                                         
HETNAM     EDO 1,2-ETHANEDIOL                                                   
HETNAM     SO4 SULFATE ION                                                      
HETSYN     GOL GLYCERIN; PROPANE-1,2,3-TRIOL                                    
HETSYN     EDO ETHYLENE GLYCOL                                                  
FORMUL   2  DKP    C18 H17 CL N2 O3                                             
FORMUL   3   MN    MN 2+                                                        
FORMUL   4  DMS    C2 H6 O S                                                    
FORMUL   5  GOL    2(C3 H8 O3)                                                  
FORMUL   7  EDO    4(C2 H6 O2)                                                  
FORMUL  11  SO4    O4 S 2-                                                      
FORMUL  12  HOH   *210(H2 O)                                                    
HELIX    1 AA1 GLU A   27  THR A   30  5                                   4    
HELIX    2 AA2 ASP A   31  GLU A   44  1                                  14    
HELIX    3 AA3 LEU A   80  THR A   84  5                                   5    
HELIX    4 AA4 LEU A  363  ASN A  379  1                                  17    
HELIX    5 AA5 PRO A  381  VAL A  385  5                                   5    
HELIX    6 AA6 PRO A  386  SER A  399  1                                  14    
HELIX    7 AA7 SER A  415  GLY A  419  1                                   5    
HELIX    8 AA8 LEU A  432  GLU A  434  5                                   3    
HELIX    9 AA9 GLU A  435  SER A  441  1                                   7    
HELIX   10 AB1 ASN A  444  MET A  448  5                                   5    
HELIX   11 AB2 SER A  454  ASN A  460  1                                   7    
HELIX   12 AB3 GLU A  485  SER A  489  5                                   5    
HELIX   13 AB4 PRO A  507  HIS A  509  5                                   3    
HELIX   14 AB5 ALA A  510  ALA A  522  1                                  13    
HELIX   15 AB6 PRO A  523  SER A  528  1                                   6    
HELIX   16 AB7 PRO A  530  GLN A  535  1                                   6    
HELIX   17 AB8 ASN A  541  HIS A  548  1                                   8    
SHEET    1 AA1 8 VAL A  21  PHE A  22  0                                        
SHEET    2 AA1 8 ILE A  48  ILE A  51  1  O  LYS A  50   N  PHE A  22           
SHEET    3 AA1 8 PHE A 562  THR A 565 -1  O  PHE A 562   N  ILE A  51           
SHEET    4 AA1 8 TYR A 490  GLY A 498 -1  N  SER A 491   O  THR A 565           
SHEET    5 AA1 8 ASN A 579  PHE A 586 -1  O  GLU A 582   N  TYR A 494           
SHEET    6 AA1 8 TRP A 470  GLY A 474 -1  N  TRP A 470   O  ALA A 583           
SHEET    7 AA1 8 ILE A 406  SER A 414 -1  N  ILE A 413   O  LEU A 471           
SHEET    8 AA1 8 ARG A  73  ARG A  76 -1  N  GLN A  75   O  VAL A 407           
SHEET    1 AA2 2 ARG A  69  PHE A  70  0                                        
SHEET    2 AA2 2 TYR A 361  THR A 362 -1  O  TYR A 361   N  PHE A  70           
SHEET    1 AA3 4 SER A 479  HIS A 483  0                                        
SHEET    2 AA3 4 HIS A 571  ASN A 575 -1  O  GLY A 573   N  PHE A 480           
SHEET    3 AA3 4 LYS A 501  GLY A 505 -1  N  THR A 502   O  PHE A 574           
SHEET    4 AA3 4 TYR A 553  GLN A 557 -1  O  GLN A 557   N  LYS A 501           
LINK         NE2 HIS A 483                MN    MN A 602     1555   1555  2.26  
LINK         OE2 GLU A 485                MN    MN A 602     1555   1555  2.01  
LINK         NE2 HIS A 571                MN    MN A 602     1555   1555  2.28  
LINK         N16 DKP A 601                MN    MN A 602     1555   1555  2.27  
LINK        MN    MN A 602                 O   HOH A 734     1555   1555  2.31  
LINK        MN    MN A 602                 O   HOH A 816     1555   1555  2.22  
SITE     1 AC1 16 ARG A  73  GLN A  75  TYR A 409  ALA A 411                    
SITE     2 AC1 16 TYR A 472  SER A 479  PHE A 480  HIS A 483                    
SITE     3 AC1 16 ASN A 493  LYS A 501  TRP A 503  GLN A 535                    
SITE     4 AC1 16 HIS A 571   MN A 602  HOH A 816  HOH A 847                    
SITE     1 AC2  6 HIS A 483  GLU A 485  HIS A 571  DKP A 601                    
SITE     2 AC2  6 HOH A 734  HOH A 816                                          
SITE     1 AC3  2 ASP A 531  TYR A 570                                          
SITE     1 AC4  7 GLY A 353  ALA A 357  VAL A 358  MET A 384                    
SITE     2 AC4  7 SER A 508  PRO A 567  ARG A 568                               
SITE     1 AC5  9 TRP A 395  PHE A 480  CYS A 481  TRP A 482                    
SITE     2 AC5  9 THR A 538  ILE A 539  MET A 540  SER A 572                    
SITE     3 AC5  9 GLY A 573                                                     
SITE     1 AC6  3 ASN A 379  GLU A 515  ARG A 568                               
SITE     1 AC7  5 MET A 380  PRO A 381  ASP A 486  HIS A 487                    
SITE     2 AC7  5 HOH A 707                                                     
SITE     1 AC8  4 GLU A  64  VAL A  65  LYS A  66  ARG A 429                    
SITE     1 AC9  2 PRO A  53  HOH A 771                                          
SITE     1 AD1  7 ARG A  76  LEU A  77  GLU A  79  SER A 479                    
SITE     2 AD1  7 ILE A 539  HOH A 702  HOH A 744                               
CRYST1  116.530   62.084   46.640  90.00  92.29  90.00 C 1 2 1       4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.008581  0.000000  0.000344        0.00000                         
SCALE2      0.000000  0.016107  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.021458        0.00000