HEADER TRANSFERASE 09-NOV-17 6BL8 TITLE PREDICTING THE CONFORMATIONAL VARIABILITY OF ABL TYROSINE KINASE USING TITLE 2 MOLECULAR DYNAMICS SIMULATIONS AND MARKOV STATE MODELS COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN KINASE ABL1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 233-504; COMPND 5 SYNONYM: ABELSON MURINE LEUKEMIA VIRAL ONCOGENE HOMOLOG 1, ABELSON COMPND 6 TYROSINE-PROTEIN KINASE 1, PROTO-ONCOGENE C-ABL, P150; COMPND 7 EC: 2.7.10.2; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ABL1, ABL, JTK7; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ABL, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR D.K.CLAWSON,C.GAO REVDAT 4 06-MAR-24 6BL8 1 REMARK REVDAT 3 04-DEC-19 6BL8 1 REMARK REVDAT 2 16-MAY-18 6BL8 1 JRNL REVDAT 1 07-MAR-18 6BL8 0 JRNL AUTH Y.MENG,C.GAO,D.K.CLAWSON,S.ATWELL,M.RUSSELL,M.VIETH,B.ROUX JRNL TITL PREDICTING THE CONFORMATIONAL VARIABILITY OF ABL TYROSINE JRNL TITL 2 KINASE USING MOLECULAR DYNAMICS SIMULATIONS AND MARKOV STATE JRNL TITL 3 MODELS. JRNL REF J CHEM THEORY COMPUT V. 14 2721 2018 JRNL REFN ISSN 1549-9626 JRNL PMID 29474075 JRNL DOI 10.1021/ACS.JCTC.7B01170 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.7 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.78 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 3 NUMBER OF REFLECTIONS : 27265 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 1388 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.000 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 14 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.59 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.40 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2900 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.1950 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2743 REMARK 3 BIN R VALUE (WORKING SET) : 0.1920 REMARK 3 BIN FREE R VALUE : 0.2360 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.41 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 157 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4207 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 75 REMARK 3 SOLVENT ATOMS : 262 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 47.37 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.62150 REMARK 3 B22 (A**2) : -0.98860 REMARK 3 B33 (A**2) : 2.61010 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.270 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.340 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.213 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.315 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.210 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.941 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4449 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 6092 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1457 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 94 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 698 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4449 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 563 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5237 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.09 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.26 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 17.42 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 33.6467 53.7417 15.8108 REMARK 3 T TENSOR REMARK 3 T11: -0.1050 T22: -0.0867 REMARK 3 T33: -0.0594 T12: -0.0360 REMARK 3 T13: -0.0053 T23: 0.0087 REMARK 3 L TENSOR REMARK 3 L11: 1.4665 L22: 0.8222 REMARK 3 L33: 2.1755 L12: 0.1077 REMARK 3 L13: 0.1016 L23: 0.1307 REMARK 3 S TENSOR REMARK 3 S11: -0.0595 S12: 0.0207 S13: -0.1039 REMARK 3 S21: -0.0379 S22: -0.0150 S23: 0.0523 REMARK 3 S31: 0.0732 S32: -0.2438 S33: 0.0744 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 33.5840 82.9700 45.8152 REMARK 3 T TENSOR REMARK 3 T11: -0.1565 T22: -0.0557 REMARK 3 T33: -0.0959 T12: 0.0044 REMARK 3 T13: 0.0247 T23: -0.1073 REMARK 3 L TENSOR REMARK 3 L11: 3.4597 L22: 1.3414 REMARK 3 L33: 1.0713 L12: -0.1381 REMARK 3 L13: -0.9366 L23: -0.5196 REMARK 3 S TENSOR REMARK 3 S11: -0.1256 S12: 0.5473 S13: -0.4504 REMARK 3 S21: -0.0502 S22: 0.0206 S23: 0.3879 REMARK 3 S31: 0.1430 S32: -0.4095 S33: 0.1050 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { I|* } REMARK 3 ORIGIN FOR THE GROUP (A): 31.7575 65.6145 21.5935 REMARK 3 T TENSOR REMARK 3 T11: 0.0033 T22: 0.0203 REMARK 3 T33: -0.0092 T12: -0.0316 REMARK 3 T13: 0.0085 T23: -0.0354 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.0000 REMARK 3 L33: 1.6650 L12: 0.5344 REMARK 3 L13: 0.5811 L23: 1.7411 REMARK 3 S TENSOR REMARK 3 S11: -0.0290 S12: -0.0794 S13: 0.1418 REMARK 3 S21: -0.1633 S22: 0.0018 S23: 0.0378 REMARK 3 S31: 0.1134 S32: -0.0396 S33: 0.0272 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6BL8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-NOV-17. REMARK 100 THE DEPOSITION ID IS D_1000231043. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-FEB-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97969 REMARK 200 MONOCHROMATOR : DIAMOND(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28182 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 20.780 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM SODIUM CITRATE, PH 5.6, 1850 MM REMARK 280 AMMONIUM SULFATE, 140 MM POTASSIUM SODIUM TARTRATE, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 52.92000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 65.52500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 52.92000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 65.52500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 503 REMARK 465 ASP A 504 REMARK 465 GLY B 250 REMARK 465 GLY B 251 REMARK 465 GLN B 252 REMARK 465 ALA B 397 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 233 CG OD1 OD2 REMARK 470 LYS A 234 CG CD CE NZ REMARK 470 ARG A 239 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 252 CG CD OE1 NE2 REMARK 470 ASP A 276 CG OD1 OD2 REMARK 470 GLU A 282 CG CD OE1 OE2 REMARK 470 LYS A 294 CD CE NZ REMARK 470 ARG A 307 CD NE CZ NH1 NH2 REMARK 470 GLU A 308 CD OE1 OE2 REMARK 470 LYS A 356 CD CE NZ REMARK 470 LYS A 400 CG CD CE NZ REMARK 470 GLU A 450 CD OE1 OE2 REMARK 470 GLU A 462 CG CD OE1 OE2 REMARK 470 LYS A 467 CE NZ REMARK 470 GLN A 498 CD OE1 NE2 REMARK 470 LYS B 234 CG CD CE NZ REMARK 470 GLU B 238 CG CD OE1 OE2 REMARK 470 ARG B 239 CG CD NE CZ NH1 NH2 REMARK 470 THR B 240 OG1 CG2 REMARK 470 THR B 243 OG1 CG2 REMARK 470 LYS B 245 CD CE NZ REMARK 470 HIS B 246 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 247 CG CD CE NZ REMARK 470 TYR B 253 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU B 255 CG CD OE1 OE2 REMARK 470 VAL B 260 CG1 CG2 REMARK 470 LYS B 262 CG CD CE NZ REMARK 470 LYS B 263 CG CD CE NZ REMARK 470 SER B 265 OG REMARK 470 LYS B 271 CD CE NZ REMARK 470 LYS B 274 CG CD CE NZ REMARK 470 GLU B 279 CG CD OE1 OE2 REMARK 470 GLU B 281 CG CD OE1 OE2 REMARK 470 GLU B 282 CD OE1 OE2 REMARK 470 LYS B 285 CG CD CE NZ REMARK 470 LYS B 294 CD CE NZ REMARK 470 THR B 306 OG1 CG2 REMARK 470 ARG B 307 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 308 CG CD OE1 OE2 REMARK 470 ASN B 331 CG OD1 ND2 REMARK 470 GLN B 333 CG CD OE1 NE2 REMARK 470 LYS B 356 CG CD CE NZ REMARK 470 LYS B 400 CG CD CE NZ REMARK 470 LYS B 415 CG CD CE NZ REMARK 470 GLU B 462 CG CD OE1 OE2 REMARK 470 LYS B 467 CG CD CE NZ REMARK 470 ASP B 504 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 252 -70.45 -40.78 REMARK 500 ASP A 276 -7.73 80.03 REMARK 500 ASP A 363 46.02 -148.32 REMARK 500 LEU B 248 75.47 -174.18 REMARK 500 GLU B 275 -56.21 -29.34 REMARK 500 CYS B 305 75.89 -118.52 REMARK 500 THR B 306 45.54 -102.14 REMARK 500 ARG B 307 -88.59 -119.15 REMARK 500 ARG B 362 -2.02 75.40 REMARK 500 ASP B 363 45.21 -146.43 REMARK 500 ILE B 502 40.69 -85.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PVB A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PVB B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 603 DBREF 6BL8 A 233 504 UNP P00519 ABL1_HUMAN 233 504 DBREF 6BL8 B 233 504 UNP P00519 ABL1_HUMAN 233 504 SEQADV 6BL8 SER A 336 UNP P00519 ASN 336 CONFLICT SEQADV 6BL8 PHE A 393 UNP P00519 TYR 393 CONFLICT SEQADV 6BL8 PRO A 445 UNP P00519 LEU 445 CONFLICT SEQADV 6BL8 SER B 336 UNP P00519 ASN 336 CONFLICT SEQADV 6BL8 PHE B 393 UNP P00519 TYR 393 CONFLICT SEQADV 6BL8 PRO B 445 UNP P00519 LEU 445 CONFLICT SEQRES 1 A 272 ASP LYS TRP GLU MET GLU ARG THR ASP ILE THR MET LYS SEQRES 2 A 272 HIS LYS LEU GLY GLY GLY GLN TYR GLY GLU VAL TYR GLU SEQRES 3 A 272 GLY VAL TRP LYS LYS TYR SER LEU THR VAL ALA VAL LYS SEQRES 4 A 272 THR LEU LYS GLU ASP THR MET GLU VAL GLU GLU PHE LEU SEQRES 5 A 272 LYS GLU ALA ALA VAL MET LYS GLU ILE LYS HIS PRO ASN SEQRES 6 A 272 LEU VAL GLN LEU LEU GLY VAL CYS THR ARG GLU PRO PRO SEQRES 7 A 272 PHE TYR ILE ILE THR GLU PHE MET THR TYR GLY ASN LEU SEQRES 8 A 272 LEU ASP TYR LEU ARG GLU CYS ASN ARG GLN GLU VAL SER SEQRES 9 A 272 ALA VAL VAL LEU LEU TYR MET ALA THR GLN ILE SER SER SEQRES 10 A 272 ALA MET GLU TYR LEU GLU LYS LYS ASN PHE ILE HIS ARG SEQRES 11 A 272 ASP LEU ALA ALA ARG ASN CYS LEU VAL GLY GLU ASN HIS SEQRES 12 A 272 LEU VAL LYS VAL ALA ASP PHE GLY LEU SER ARG LEU MET SEQRES 13 A 272 THR GLY ASP THR PHE THR ALA HIS ALA GLY ALA LYS PHE SEQRES 14 A 272 PRO ILE LYS TRP THR ALA PRO GLU SER LEU ALA TYR ASN SEQRES 15 A 272 LYS PHE SER ILE LYS SER ASP VAL TRP ALA PHE GLY VAL SEQRES 16 A 272 LEU LEU TRP GLU ILE ALA THR TYR GLY MET SER PRO TYR SEQRES 17 A 272 PRO GLY ILE ASP PRO SER GLN VAL TYR GLU LEU LEU GLU SEQRES 18 A 272 LYS ASP TYR ARG MET GLU ARG PRO GLU GLY CYS PRO GLU SEQRES 19 A 272 LYS VAL TYR GLU LEU MET ARG ALA CYS TRP GLN TRP ASN SEQRES 20 A 272 PRO SER ASP ARG PRO SER PHE ALA GLU ILE HIS GLN ALA SEQRES 21 A 272 PHE GLU THR MET PHE GLN GLU SER SER ILE SER ASP SEQRES 1 B 272 ASP LYS TRP GLU MET GLU ARG THR ASP ILE THR MET LYS SEQRES 2 B 272 HIS LYS LEU GLY GLY GLY GLN TYR GLY GLU VAL TYR GLU SEQRES 3 B 272 GLY VAL TRP LYS LYS TYR SER LEU THR VAL ALA VAL LYS SEQRES 4 B 272 THR LEU LYS GLU ASP THR MET GLU VAL GLU GLU PHE LEU SEQRES 5 B 272 LYS GLU ALA ALA VAL MET LYS GLU ILE LYS HIS PRO ASN SEQRES 6 B 272 LEU VAL GLN LEU LEU GLY VAL CYS THR ARG GLU PRO PRO SEQRES 7 B 272 PHE TYR ILE ILE THR GLU PHE MET THR TYR GLY ASN LEU SEQRES 8 B 272 LEU ASP TYR LEU ARG GLU CYS ASN ARG GLN GLU VAL SER SEQRES 9 B 272 ALA VAL VAL LEU LEU TYR MET ALA THR GLN ILE SER SER SEQRES 10 B 272 ALA MET GLU TYR LEU GLU LYS LYS ASN PHE ILE HIS ARG SEQRES 11 B 272 ASP LEU ALA ALA ARG ASN CYS LEU VAL GLY GLU ASN HIS SEQRES 12 B 272 LEU VAL LYS VAL ALA ASP PHE GLY LEU SER ARG LEU MET SEQRES 13 B 272 THR GLY ASP THR PHE THR ALA HIS ALA GLY ALA LYS PHE SEQRES 14 B 272 PRO ILE LYS TRP THR ALA PRO GLU SER LEU ALA TYR ASN SEQRES 15 B 272 LYS PHE SER ILE LYS SER ASP VAL TRP ALA PHE GLY VAL SEQRES 16 B 272 LEU LEU TRP GLU ILE ALA THR TYR GLY MET SER PRO TYR SEQRES 17 B 272 PRO GLY ILE ASP PRO SER GLN VAL TYR GLU LEU LEU GLU SEQRES 18 B 272 LYS ASP TYR ARG MET GLU ARG PRO GLU GLY CYS PRO GLU SEQRES 19 B 272 LYS VAL TYR GLU LEU MET ARG ALA CYS TRP GLN TRP ASN SEQRES 20 B 272 PRO SER ASP ARG PRO SER PHE ALA GLU ILE HIS GLN ALA SEQRES 21 B 272 PHE GLU THR MET PHE GLN GLU SER SER ILE SER ASP HET PVB A 601 55 HET SO4 A 602 5 HET PVB B 601 55 HET SO4 B 602 5 HET SO4 B 603 5 HETNAM PVB PURVALANOL B HETNAM SO4 SULFATE ION HETSYN PVB 2-CHLORO-4-{[2-{[(1R)-1-(HYDROXYMETHYL)-2- HETSYN 2 PVB METHYLPROPYL]AMINO}-9-(1-METHYLETHYL)-9H-PURIN-6- HETSYN 3 PVB YL]AMINO}BENZOIC ACID FORMUL 3 PVB 2(C20 H25 CL N6 O3) FORMUL 4 SO4 3(O4 S 2-) FORMUL 8 HOH *262(H2 O) HELIX 1 AA1 GLU A 238 THR A 240 5 3 HELIX 2 AA2 LYS A 263 SER A 265 5 3 HELIX 3 AA3 GLU A 279 LYS A 291 1 13 HELIX 4 AA4 ASN A 322 CYS A 330 1 9 HELIX 5 AA5 SER A 336 LYS A 357 1 22 HELIX 6 AA6 ALA A 365 ARG A 367 5 3 HELIX 7 AA7 GLU A 373 HIS A 375 5 3 HELIX 8 AA8 PRO A 402 THR A 406 5 5 HELIX 9 AA9 ALA A 407 ASN A 414 1 8 HELIX 10 AB1 SER A 417 THR A 434 1 18 HELIX 11 AB2 ASP A 444 SER A 446 5 3 HELIX 12 AB3 GLN A 447 LYS A 454 1 8 HELIX 13 AB4 PRO A 465 TRP A 476 1 12 HELIX 14 AB5 ASN A 479 ARG A 483 5 5 HELIX 15 AB6 SER A 485 ILE A 502 1 18 HELIX 16 AB7 GLU B 238 THR B 240 5 3 HELIX 17 AB8 LYS B 263 SER B 265 5 3 HELIX 18 AB9 GLU B 279 LYS B 291 1 13 HELIX 19 AC1 ASN B 322 CYS B 330 1 9 HELIX 20 AC2 SER B 336 LYS B 357 1 22 HELIX 21 AC3 ALA B 365 ARG B 367 5 3 HELIX 22 AC4 GLU B 373 HIS B 375 5 3 HELIX 23 AC5 PRO B 402 THR B 406 5 5 HELIX 24 AC6 ALA B 407 ASN B 414 1 8 HELIX 25 AC7 ILE B 418 THR B 434 1 17 HELIX 26 AC8 ASP B 444 SER B 446 5 3 HELIX 27 AC9 GLN B 447 LYS B 454 1 8 HELIX 28 AD1 PRO B 465 TRP B 476 1 12 HELIX 29 AD2 ASN B 479 ARG B 483 5 5 HELIX 30 AD3 SER B 485 SER B 500 1 16 SHEET 1 AA1 5 ILE A 242 GLY A 250 0 SHEET 2 AA1 5 GLU A 255 TRP A 261 -1 O GLU A 258 N HIS A 246 SHEET 3 AA1 5 LEU A 266 THR A 272 -1 O LEU A 266 N TRP A 261 SHEET 4 AA1 5 TYR A 312 GLU A 316 -1 O ILE A 313 N LYS A 271 SHEET 5 AA1 5 LEU A 301 CYS A 305 -1 N GLY A 303 O ILE A 314 SHEET 1 AA2 2 PHE A 359 ILE A 360 0 SHEET 2 AA2 2 SER A 385 ARG A 386 -1 O SER A 385 N ILE A 360 SHEET 1 AA3 2 CYS A 369 VAL A 371 0 SHEET 2 AA3 2 VAL A 377 VAL A 379 -1 O LYS A 378 N LEU A 370 SHEET 1 AA4 2 PHE A 393 THR A 394 0 SHEET 2 AA4 2 LYS A 415 PHE A 416 -1 O PHE A 416 N PHE A 393 SHEET 1 AA5 5 ILE B 242 LYS B 247 0 SHEET 2 AA5 5 GLU B 255 TRP B 261 -1 O GLU B 258 N LYS B 245 SHEET 3 AA5 5 LEU B 266 LEU B 273 -1 O THR B 272 N GLU B 255 SHEET 4 AA5 5 PHE B 311 GLU B 316 -1 O ILE B 313 N LYS B 271 SHEET 5 AA5 5 LEU B 301 CYS B 305 -1 N GLY B 303 O ILE B 314 SHEET 1 AA6 2 PHE B 359 ILE B 360 0 SHEET 2 AA6 2 SER B 385 ARG B 386 -1 O SER B 385 N ILE B 360 SHEET 1 AA7 2 CYS B 369 VAL B 371 0 SHEET 2 AA7 2 VAL B 377 VAL B 379 -1 O LYS B 378 N LEU B 370 SHEET 1 AA8 2 THR B 392 THR B 394 0 SHEET 2 AA8 2 LYS B 415 SER B 417 -1 O PHE B 416 N PHE B 393 CISPEP 1 PRO A 309 PRO A 310 0 -25.13 CISPEP 2 PRO B 309 PRO B 310 0 -0.74 SITE 1 AC1 16 LEU A 248 GLY A 250 ALA A 269 VAL A 299 SITE 2 AC1 16 THR A 315 GLU A 316 PHE A 317 MET A 318 SITE 3 AC1 16 THR A 319 GLY A 321 ASN A 322 LEU A 370 SITE 4 AC1 16 PHE A 382 HOH A 710 HOH A 798 HOH A 808 SITE 1 AC2 7 LYS A 245 HIS A 246 LYS A 247 HOH A 702 SITE 2 AC2 7 HOH A 725 GLN B 477 HOH B 703 SITE 1 AC3 9 LEU B 248 ALA B 269 THR B 315 GLU B 316 SITE 2 AC3 9 PHE B 317 MET B 318 THR B 319 GLY B 321 SITE 3 AC3 9 LEU B 370 SITE 1 AC4 5 ARG B 362 PHE B 393 ALA B 395 HIS B 396 SITE 2 AC4 5 HOH B 714 SITE 1 AC5 3 ARG B 460 GLU B 462 GLY B 463 CRYST1 105.840 131.050 57.020 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009448 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007631 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017538 0.00000