HEADER MEMBRANE PROTEIN 15-NOV-17 6BMZ TITLE INFLUENZA A M2 TRANSMEMBRANE DOMAIN BOUND TO A SPIROADAMANTANE TITLE 2 INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: MATRIX PROTEIN 2; COMPND 3 CHAIN: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 4 ORGANISM_TAXID: 11320 KEYWDS INFLUENZA M2, PROTON CHANNEL, MEMBRANE PROTEIN, SPIROADAMANTANE EXPDTA X-RAY DIFFRACTION AUTHOR J.L.THOMASTON,W.F.DEGRADO REVDAT 4 04-OCT-23 6BMZ 1 REMARK REVDAT 3 01-JAN-20 6BMZ 1 REMARK REVDAT 2 28-NOV-18 6BMZ 1 JRNL REVDAT 1 19-SEP-18 6BMZ 0 JRNL AUTH J.L.THOMASTON,N.F.POLIZZI,A.KONSTANTINIDI,J.WANG, JRNL AUTH 2 A.KOLOCOURIS,W.F.DEGRADO JRNL TITL INHIBITORS OF THE M2 PROTON CHANNEL ENGAGE AND DISRUPT JRNL TITL 2 TRANSMEMBRANE NETWORKS OF HYDROGEN-BONDED WATERS. JRNL REF J. AM. CHEM. SOC. V. 140 15219 2018 JRNL REFN ESSN 1520-5126 JRNL PMID 30165017 JRNL DOI 10.1021/JACS.8B06741 REMARK 2 REMARK 2 RESOLUTION. 2.63 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.63 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.59 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 10947 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.231 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1094 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 58.6058 - 5.2669 0.98 1319 148 0.2875 0.3193 REMARK 3 2 5.2669 - 4.1808 0.99 1242 139 0.2170 0.2440 REMARK 3 3 4.1808 - 3.6524 0.99 1233 136 0.2082 0.2314 REMARK 3 4 3.6524 - 3.3185 0.99 1216 135 0.2075 0.2928 REMARK 3 5 3.3185 - 3.0807 0.98 1220 135 0.2094 0.2945 REMARK 3 6 3.0807 - 2.8990 0.99 1218 134 0.1987 0.2821 REMARK 3 7 2.8990 - 2.7539 0.98 1196 134 0.2012 0.2653 REMARK 3 8 2.7539 - 2.6340 0.98 1209 133 0.2485 0.3379 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.460 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 3088 REMARK 3 ANGLE : 0.437 4248 REMARK 3 CHIRALITY : 0.040 594 REMARK 3 PLANARITY : 0.002 462 REMARK 3 DIHEDRAL : 10.398 1052 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6BMZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-NOV-17. REMARK 100 THE DEPOSITION ID IS D_1000231147. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-APR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1158 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11007 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.630 REMARK 200 RESOLUTION RANGE LOW (A) : 72.590 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.16400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.63 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 0.65400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3LBW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7, 30% V/V PEG 400, REMARK 280 MONOOLEIN, SPIROADAMANTANE AMINE, PH 7.0, LIPIDIC CUBIC PHASE, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.81000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.62500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.29500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.62500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.81000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.29500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: I, J, K, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: M, N, O, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ACE A 21 REMARK 465 SER A 22 REMARK 465 ACE B 21 REMARK 465 SER B 22 REMARK 465 SER B 23 REMARK 465 ACE C 21 REMARK 465 SER C 22 REMARK 465 ACE D 21 REMARK 465 SER D 22 REMARK 465 SER D 23 REMARK 465 ACE E 21 REMARK 465 SER E 22 REMARK 465 ACE F 21 REMARK 465 SER F 22 REMARK 465 SER F 23 REMARK 465 ACE G 21 REMARK 465 ACE H 21 REMARK 465 SER H 22 REMARK 465 ACE I 21 REMARK 465 SER I 22 REMARK 465 ACE J 21 REMARK 465 SER J 22 REMARK 465 SER J 23 REMARK 465 ACE K 21 REMARK 465 SER K 22 REMARK 465 ACE L 21 REMARK 465 SER L 22 REMARK 465 ACE M 21 REMARK 465 SER M 22 REMARK 465 ACE N 21 REMARK 465 ACE O 21 REMARK 465 SER O 22 REMARK 465 ACE P 21 REMARK 465 SER P 22 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP I 24 107.36 -57.11 REMARK 500 SER N 23 71.87 -111.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue E01 A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue E01 E 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue E01 K 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue E01 P 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide LEU B 46 and NH2 B REMARK 800 47 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide LEU C 46 and NH2 C REMARK 800 47 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide LEU D 46 and NH2 D REMARK 800 47 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide LEU E 46 and NH2 E REMARK 800 47 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide LEU F 46 and NH2 F REMARK 800 47 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide LEU G 46 and NH2 G REMARK 800 47 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide LEU H 46 and NH2 H REMARK 800 47 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide LEU I 46 and NH2 I REMARK 800 47 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide LEU J 46 and NH2 J REMARK 800 47 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide LEU K 46 and NH2 K REMARK 800 47 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide LEU L 46 and NH2 L REMARK 800 47 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide LEU M 46 and NH2 M REMARK 800 47 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide LEU N 46 and NH2 N REMARK 800 47 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide LEU O 46 and NH2 O REMARK 800 47 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide LEU P 46 and NH2 P REMARK 800 47 DBREF 6BMZ A 22 46 UNP Q20MD5 Q20MD5_I72A8 22 46 DBREF 6BMZ B 22 46 UNP Q20MD5 Q20MD5_I72A8 22 46 DBREF 6BMZ C 22 46 UNP Q20MD5 Q20MD5_I72A8 22 46 DBREF 6BMZ D 22 46 UNP Q20MD5 Q20MD5_I72A8 22 46 DBREF 6BMZ E 22 46 UNP Q20MD5 Q20MD5_I72A8 22 46 DBREF 6BMZ F 22 46 UNP Q20MD5 Q20MD5_I72A8 22 46 DBREF 6BMZ G 22 46 UNP Q20MD5 Q20MD5_I72A8 22 46 DBREF 6BMZ H 22 46 UNP Q20MD5 Q20MD5_I72A8 22 46 DBREF 6BMZ I 22 46 UNP Q20MD5 Q20MD5_I72A8 22 46 DBREF 6BMZ J 22 46 UNP Q20MD5 Q20MD5_I72A8 22 46 DBREF 6BMZ K 22 46 UNP Q20MD5 Q20MD5_I72A8 22 46 DBREF 6BMZ L 22 46 UNP Q20MD5 Q20MD5_I72A8 22 46 DBREF 6BMZ M 22 46 UNP Q20MD5 Q20MD5_I72A8 22 46 DBREF 6BMZ N 22 46 UNP Q20MD5 Q20MD5_I72A8 22 46 DBREF 6BMZ O 22 46 UNP Q20MD5 Q20MD5_I72A8 22 46 DBREF 6BMZ P 22 46 UNP Q20MD5 Q20MD5_I72A8 22 46 SEQADV 6BMZ ACE A 21 UNP Q20MD5 ACETYLATION SEQADV 6BMZ NH2 A 47 UNP Q20MD5 AMIDATION SEQADV 6BMZ ACE B 21 UNP Q20MD5 ACETYLATION SEQADV 6BMZ NH2 B 47 UNP Q20MD5 AMIDATION SEQADV 6BMZ ACE C 21 UNP Q20MD5 ACETYLATION SEQADV 6BMZ NH2 C 47 UNP Q20MD5 AMIDATION SEQADV 6BMZ ACE D 21 UNP Q20MD5 ACETYLATION SEQADV 6BMZ NH2 D 47 UNP Q20MD5 AMIDATION SEQADV 6BMZ ACE E 21 UNP Q20MD5 ACETYLATION SEQADV 6BMZ NH2 E 47 UNP Q20MD5 AMIDATION SEQADV 6BMZ ACE F 21 UNP Q20MD5 ACETYLATION SEQADV 6BMZ NH2 F 47 UNP Q20MD5 AMIDATION SEQADV 6BMZ ACE G 21 UNP Q20MD5 ACETYLATION SEQADV 6BMZ NH2 G 47 UNP Q20MD5 AMIDATION SEQADV 6BMZ ACE H 21 UNP Q20MD5 ACETYLATION SEQADV 6BMZ NH2 H 47 UNP Q20MD5 AMIDATION SEQADV 6BMZ ACE I 21 UNP Q20MD5 ACETYLATION SEQADV 6BMZ NH2 I 47 UNP Q20MD5 AMIDATION SEQADV 6BMZ ACE J 21 UNP Q20MD5 ACETYLATION SEQADV 6BMZ NH2 J 47 UNP Q20MD5 AMIDATION SEQADV 6BMZ ACE K 21 UNP Q20MD5 ACETYLATION SEQADV 6BMZ NH2 K 47 UNP Q20MD5 AMIDATION SEQADV 6BMZ ACE L 21 UNP Q20MD5 ACETYLATION SEQADV 6BMZ NH2 L 47 UNP Q20MD5 AMIDATION SEQADV 6BMZ ACE M 21 UNP Q20MD5 ACETYLATION SEQADV 6BMZ NH2 M 47 UNP Q20MD5 AMIDATION SEQADV 6BMZ ACE N 21 UNP Q20MD5 ACETYLATION SEQADV 6BMZ NH2 N 47 UNP Q20MD5 AMIDATION SEQADV 6BMZ ACE O 21 UNP Q20MD5 ACETYLATION SEQADV 6BMZ NH2 O 47 UNP Q20MD5 AMIDATION SEQADV 6BMZ ACE P 21 UNP Q20MD5 ACETYLATION SEQADV 6BMZ NH2 P 47 UNP Q20MD5 AMIDATION SEQRES 1 A 27 ACE SER SER ASP PRO LEU VAL VAL ALA ALA SER ILE ILE SEQRES 2 A 27 GLY ILE LEU HIS LEU ILE LEU TRP ILE LEU ASP ARG LEU SEQRES 3 A 27 NH2 SEQRES 1 B 27 ACE SER SER ASP PRO LEU VAL VAL ALA ALA SER ILE ILE SEQRES 2 B 27 GLY ILE LEU HIS LEU ILE LEU TRP ILE LEU ASP ARG LEU SEQRES 3 B 27 NH2 SEQRES 1 C 27 ACE SER SER ASP PRO LEU VAL VAL ALA ALA SER ILE ILE SEQRES 2 C 27 GLY ILE LEU HIS LEU ILE LEU TRP ILE LEU ASP ARG LEU SEQRES 3 C 27 NH2 SEQRES 1 D 27 ACE SER SER ASP PRO LEU VAL VAL ALA ALA SER ILE ILE SEQRES 2 D 27 GLY ILE LEU HIS LEU ILE LEU TRP ILE LEU ASP ARG LEU SEQRES 3 D 27 NH2 SEQRES 1 E 27 ACE SER SER ASP PRO LEU VAL VAL ALA ALA SER ILE ILE SEQRES 2 E 27 GLY ILE LEU HIS LEU ILE LEU TRP ILE LEU ASP ARG LEU SEQRES 3 E 27 NH2 SEQRES 1 F 27 ACE SER SER ASP PRO LEU VAL VAL ALA ALA SER ILE ILE SEQRES 2 F 27 GLY ILE LEU HIS LEU ILE LEU TRP ILE LEU ASP ARG LEU SEQRES 3 F 27 NH2 SEQRES 1 G 27 ACE SER SER ASP PRO LEU VAL VAL ALA ALA SER ILE ILE SEQRES 2 G 27 GLY ILE LEU HIS LEU ILE LEU TRP ILE LEU ASP ARG LEU SEQRES 3 G 27 NH2 SEQRES 1 H 27 ACE SER SER ASP PRO LEU VAL VAL ALA ALA SER ILE ILE SEQRES 2 H 27 GLY ILE LEU HIS LEU ILE LEU TRP ILE LEU ASP ARG LEU SEQRES 3 H 27 NH2 SEQRES 1 I 27 ACE SER SER ASP PRO LEU VAL VAL ALA ALA SER ILE ILE SEQRES 2 I 27 GLY ILE LEU HIS LEU ILE LEU TRP ILE LEU ASP ARG LEU SEQRES 3 I 27 NH2 SEQRES 1 J 27 ACE SER SER ASP PRO LEU VAL VAL ALA ALA SER ILE ILE SEQRES 2 J 27 GLY ILE LEU HIS LEU ILE LEU TRP ILE LEU ASP ARG LEU SEQRES 3 J 27 NH2 SEQRES 1 K 27 ACE SER SER ASP PRO LEU VAL VAL ALA ALA SER ILE ILE SEQRES 2 K 27 GLY ILE LEU HIS LEU ILE LEU TRP ILE LEU ASP ARG LEU SEQRES 3 K 27 NH2 SEQRES 1 L 27 ACE SER SER ASP PRO LEU VAL VAL ALA ALA SER ILE ILE SEQRES 2 L 27 GLY ILE LEU HIS LEU ILE LEU TRP ILE LEU ASP ARG LEU SEQRES 3 L 27 NH2 SEQRES 1 M 27 ACE SER SER ASP PRO LEU VAL VAL ALA ALA SER ILE ILE SEQRES 2 M 27 GLY ILE LEU HIS LEU ILE LEU TRP ILE LEU ASP ARG LEU SEQRES 3 M 27 NH2 SEQRES 1 N 27 ACE SER SER ASP PRO LEU VAL VAL ALA ALA SER ILE ILE SEQRES 2 N 27 GLY ILE LEU HIS LEU ILE LEU TRP ILE LEU ASP ARG LEU SEQRES 3 N 27 NH2 SEQRES 1 O 27 ACE SER SER ASP PRO LEU VAL VAL ALA ALA SER ILE ILE SEQRES 2 O 27 GLY ILE LEU HIS LEU ILE LEU TRP ILE LEU ASP ARG LEU SEQRES 3 O 27 NH2 SEQRES 1 P 27 ACE SER SER ASP PRO LEU VAL VAL ALA ALA SER ILE ILE SEQRES 2 P 27 GLY ILE LEU HIS LEU ILE LEU TRP ILE LEU ASP ARG LEU SEQRES 3 P 27 NH2 HET NH2 A 47 1 HET NH2 B 47 1 HET NH2 C 47 1 HET NH2 D 47 1 HET NH2 E 47 1 HET NH2 F 47 1 HET NH2 G 47 1 HET NH2 H 47 1 HET NH2 I 47 1 HET NH2 J 47 1 HET NH2 K 47 1 HET NH2 L 47 1 HET NH2 M 47 1 HET NH2 N 47 1 HET NH2 O 47 1 HET NH2 P 47 1 HET E01 A 101 16 HET CL D 101 1 HET E01 E 101 16 HET CL G 101 1 HET CL I 101 1 HET E01 K 101 16 HET E01 P 101 16 HET CL P 102 1 HETNAM NH2 AMINO GROUP HETNAM E01 (1R,1'S,3'S,5'S,7'S)-SPIRO[CYCLOHEXANE-1,2'- HETNAM 2 E01 TRICYCLO[3.3.1.1~3,7~]DECAN]-4-AMINE HETNAM CL CHLORIDE ION FORMUL 1 NH2 16(H2 N) FORMUL 17 E01 4(C15 H25 N) FORMUL 18 CL 4(CL 1-) FORMUL 25 HOH *67(H2 O) HELIX 1 AA1 ASP A 24 LEU A 46 1 23 HELIX 2 AA2 PRO B 25 LEU B 46 1 22 HELIX 3 AA3 ASP C 24 LEU C 46 1 23 HELIX 4 AA4 PRO D 25 LEU D 46 1 22 HELIX 5 AA5 ASP E 24 LEU E 46 1 23 HELIX 6 AA6 PRO F 25 LEU F 46 1 22 HELIX 7 AA7 ASP G 24 LEU G 46 1 23 HELIX 8 AA8 ASP H 24 LEU H 46 1 23 HELIX 9 AA9 ASP I 24 LEU I 46 1 23 HELIX 10 AB1 PRO J 25 LEU J 46 1 22 HELIX 11 AB2 ASP K 24 LEU K 46 1 23 HELIX 12 AB3 ASP L 24 LEU L 46 1 23 HELIX 13 AB4 ASP M 24 LEU M 46 1 23 HELIX 14 AB5 ASP N 24 LEU N 46 1 23 HELIX 15 AB6 ASP O 24 LEU O 46 1 23 HELIX 16 AB7 ASP P 24 LEU P 46 1 23 LINK C LEU A 46 N NH2 A 47 1555 1555 1.33 LINK C LEU B 46 N NH2 B 47 1555 1555 1.33 LINK C LEU C 46 N NH2 C 47 1555 1555 1.33 LINK C LEU D 46 N NH2 D 47 1555 1555 1.33 LINK C LEU E 46 N NH2 E 47 1555 1555 1.33 LINK C LEU F 46 N NH2 F 47 1555 1555 1.33 LINK C LEU G 46 N NH2 G 47 1555 1555 1.33 LINK C LEU H 46 N NH2 H 47 1555 1555 1.33 LINK C LEU I 46 N NH2 I 47 1555 1555 1.33 LINK C LEU J 46 N NH2 J 47 1555 1555 1.33 LINK C LEU K 46 N NH2 K 47 1555 1555 1.33 LINK C LEU L 46 N NH2 L 47 1555 1555 1.33 LINK C LEU M 46 N NH2 M 47 1555 1555 1.33 LINK C LEU N 46 N NH2 N 47 1555 1555 1.33 LINK C LEU O 46 N NH2 O 47 1555 1555 1.33 LINK C LEU P 46 N NH2 P 47 1555 1555 1.33 SITE 1 AC1 8 ALA A 30 SER A 31 HOH A 201 SER B 31 SITE 2 AC1 8 ALA C 30 SER C 31 ALA D 30 SER D 31 SITE 1 AC2 7 ALA E 30 SER E 31 SER F 31 SER G 31 SITE 2 AC2 7 HOH G 201 ALA H 30 SER H 31 SITE 1 AC3 8 SER I 31 HOH J 101 ALA K 30 SER K 31 SITE 2 AC3 8 GLY K 34 ALA L 30 SER L 31 HOH L 103 SITE 1 AC4 8 ALA M 30 ALA N 30 SER N 31 GLY N 34 SITE 2 AC4 8 ALA O 30 ALA P 30 GLY P 34 HOH P 201 SITE 1 AC5 6 ILE B 42 LEU B 43 ASP B 44 ARG B 45 SITE 2 AC5 6 ARG F 45 PRO G 25 SITE 1 AC6 4 ILE C 42 LEU C 43 ASP C 44 ARG C 45 SITE 1 AC7 5 SER A 23 ILE D 42 LEU D 43 ASP D 44 SITE 2 AC7 5 ARG D 45 SITE 1 AC8 5 ILE E 42 LEU E 43 ASP E 44 ARG E 45 SITE 2 AC8 5 ARG O 45 SITE 1 AC9 6 ARG B 45 PRO C 25 ILE F 42 LEU F 43 SITE 2 AC9 6 ASP F 44 ARG F 45 SITE 1 AD1 4 ILE G 42 LEU G 43 ASP G 44 ARG G 45 SITE 1 AD2 6 SER E 23 ASP E 24 ILE H 42 LEU H 43 SITE 2 AD2 6 ASP H 44 ARG H 45 SITE 1 AD3 4 ILE I 42 LEU I 43 ASP I 44 ARG I 45 SITE 1 AD4 4 ILE J 42 LEU J 43 ASP J 44 ARG J 45 SITE 1 AD5 6 ILE K 42 LEU K 43 ASP K 44 ARG K 45 SITE 2 AD5 6 PRO L 25 SER P 23 SITE 1 AD6 5 PRO H 25 ILE L 42 LEU L 43 ASP L 44 SITE 2 AD6 5 ARG L 45 SITE 1 AD7 5 ASP I 44 ILE M 42 LEU M 43 ASP M 44 SITE 2 AD7 5 ARG M 45 SITE 1 AD8 5 PRO F 25 ILE N 42 LEU N 43 ASP N 44 SITE 2 AD8 5 ARG N 45 SITE 1 AD9 5 ILE O 42 LEU O 43 ASP O 44 ARG O 45 SITE 2 AD9 5 PRO P 25 SITE 1 AE1 3 ILE P 42 ASP P 44 ARG P 45 CRYST1 49.620 72.590 99.250 90.00 90.00 90.00 P 21 21 21 64 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020153 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013776 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010076 0.00000