HEADER SUGAR BINDING PROTEIN 15-NOV-17 6BN0 TITLE AVIRULENCE PROTEIN 4 (AVR4) FROM CLADOSPORIUM FULVUM BOUND TO THE TITLE 2 HEXASACCHARIDE OF CHITIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: RACE-SPECIFIC ELICITOR A4; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PASSALORA FULVA; SOURCE 3 ORGANISM_COMMON: TOMATO LEAF MOLD; SOURCE 4 ORGANISM_TAXID: 5499; SOURCE 5 GENE: AVR4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA-GAMI B; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PCDG-DUET-1 KEYWDS PLANT IMMUNITY, EFFECTOR PROTEIN, CHITIN BINDING PROTEIN, CBM14, KEYWDS 2 SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.K.HURLBURT,A.J.FISHER REVDAT 5 04-OCT-23 6BN0 1 HETSYN REVDAT 4 29-JUL-20 6BN0 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 01-JAN-20 6BN0 1 REMARK REVDAT 2 26-SEP-18 6BN0 1 JRNL REVDAT 1 22-AUG-18 6BN0 0 JRNL AUTH N.K.HURLBURT,L.H.CHEN,I.STERGIOPOULOS,A.J.FISHER JRNL TITL STRUCTURE OF THE CLADOSPORIUM FULVUM AVR4 EFFECTOR IN JRNL TITL 2 COMPLEX WITH (GLCNAC)6 REVEALS THE LIGAND-BINDING MECHANISM JRNL TITL 3 AND UNCOUPLES ITS INTRINSIC FUNCTION FROM RECOGNITION BY THE JRNL TITL 4 CF-4 RESISTANCE PROTEIN. JRNL REF PLOS PATHOG. V. 14 07263 2018 JRNL REFN ESSN 1553-7374 JRNL PMID 30148881 JRNL DOI 10.1371/JOURNAL.PPAT.1007263 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 60.11 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 28641 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1436 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 60.1395 - 4.2007 0.98 2819 123 0.1607 0.1857 REMARK 3 2 4.2007 - 3.3343 0.99 2731 123 0.1449 0.1799 REMARK 3 3 3.3343 - 2.9128 1.00 2743 152 0.1658 0.2328 REMARK 3 4 2.9128 - 2.6465 1.00 2727 138 0.1756 0.2247 REMARK 3 5 2.6465 - 2.4568 1.00 2691 166 0.1701 0.2338 REMARK 3 6 2.4568 - 2.3120 1.00 2706 144 0.1707 0.2413 REMARK 3 7 2.3120 - 2.1962 1.00 2681 157 0.1774 0.2289 REMARK 3 8 2.1962 - 2.1006 1.00 2694 149 0.1974 0.2217 REMARK 3 9 2.1006 - 2.0197 1.00 2694 171 0.2176 0.2931 REMARK 3 10 2.0197 - 1.9500 1.00 2719 113 0.2453 0.2643 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.970 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.93 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 2877 REMARK 3 ANGLE : 1.261 3989 REMARK 3 CHIRALITY : 0.066 488 REMARK 3 PLANARITY : 0.010 477 REMARK 3 DIHEDRAL : 12.841 1764 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 35 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.2328 -12.2953 -36.6156 REMARK 3 T TENSOR REMARK 3 T11: 0.4043 T22: 0.2117 REMARK 3 T33: 0.3385 T12: 0.0267 REMARK 3 T13: 0.0160 T23: 0.0017 REMARK 3 L TENSOR REMARK 3 L11: 3.2616 L22: 8.0899 REMARK 3 L33: 6.8826 L12: 0.1961 REMARK 3 L13: -1.3712 L23: 2.9858 REMARK 3 S TENSOR REMARK 3 S11: 0.0868 S12: 0.1470 S13: -0.1605 REMARK 3 S21: -0.0598 S22: -0.0940 S23: -0.3970 REMARK 3 S31: 0.1989 S32: 0.3653 S33: 0.0700 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 49 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.6857 -7.2012 -46.4152 REMARK 3 T TENSOR REMARK 3 T11: 0.2849 T22: 0.3400 REMARK 3 T33: 0.3145 T12: 0.0233 REMARK 3 T13: 0.0111 T23: -0.0284 REMARK 3 L TENSOR REMARK 3 L11: 4.0910 L22: 6.1262 REMARK 3 L33: 8.5188 L12: -5.0209 REMARK 3 L13: 0.4841 L23: -0.8580 REMARK 3 S TENSOR REMARK 3 S11: -0.2183 S12: 0.4269 S13: -0.0620 REMARK 3 S21: 0.6076 S22: -0.0807 S23: -0.8250 REMARK 3 S31: 0.8633 S32: 0.6400 S33: 0.2714 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 57 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.4961 -0.6494 -31.7171 REMARK 3 T TENSOR REMARK 3 T11: 0.4099 T22: 0.2200 REMARK 3 T33: 0.3023 T12: -0.0579 REMARK 3 T13: -0.0209 T23: 0.0082 REMARK 3 L TENSOR REMARK 3 L11: 4.3630 L22: 9.5417 REMARK 3 L33: 5.6800 L12: -3.7793 REMARK 3 L13: -2.6446 L23: 2.7001 REMARK 3 S TENSOR REMARK 3 S11: -0.2392 S12: -0.2241 S13: 0.3212 REMARK 3 S21: 1.2684 S22: 0.3807 S23: -0.2316 REMARK 3 S31: 0.2277 S32: 0.1096 S33: 0.1575 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 66 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.4876 -6.0220 -38.3587 REMARK 3 T TENSOR REMARK 3 T11: 0.2748 T22: 0.2426 REMARK 3 T33: 0.3235 T12: 0.0333 REMARK 3 T13: -0.0581 T23: 0.0893 REMARK 3 L TENSOR REMARK 3 L11: 6.0799 L22: 9.3263 REMARK 3 L33: 4.1362 L12: -1.8468 REMARK 3 L13: 0.1730 L23: -0.1166 REMARK 3 S TENSOR REMARK 3 S11: 0.0574 S12: 0.1960 S13: -0.5678 REMARK 3 S21: 0.4422 S22: -0.3445 S23: -0.5055 REMARK 3 S31: 0.6265 S32: 0.5247 S33: 0.0508 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 86 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.6992 3.3269 -36.3058 REMARK 3 T TENSOR REMARK 3 T11: 0.2524 T22: 0.2454 REMARK 3 T33: 0.3263 T12: -0.0375 REMARK 3 T13: 0.0400 T23: -0.0024 REMARK 3 L TENSOR REMARK 3 L11: 3.0238 L22: 5.8720 REMARK 3 L33: 5.5576 L12: 1.4642 REMARK 3 L13: 0.3124 L23: 0.1049 REMARK 3 S TENSOR REMARK 3 S11: 0.1446 S12: -0.0606 S13: 0.0788 REMARK 3 S21: 0.5316 S22: -0.2017 S23: 0.3229 REMARK 3 S31: 0.0249 S32: -0.4959 S33: 0.0720 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 35 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.3407 9.8357 -59.7485 REMARK 3 T TENSOR REMARK 3 T11: 0.2252 T22: 0.3678 REMARK 3 T33: 0.3882 T12: 0.0335 REMARK 3 T13: 0.0458 T23: 0.1413 REMARK 3 L TENSOR REMARK 3 L11: 7.4751 L22: 5.3934 REMARK 3 L33: 2.5514 L12: -1.6016 REMARK 3 L13: 0.6651 L23: -3.6819 REMARK 3 S TENSOR REMARK 3 S11: 0.0510 S12: 0.7730 S13: 0.4920 REMARK 3 S21: -0.5706 S22: -0.6169 S23: -0.3164 REMARK 3 S31: -0.1659 S32: 0.7549 S33: 0.2045 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 49 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.2651 7.4938 -56.5240 REMARK 3 T TENSOR REMARK 3 T11: 0.1400 T22: 0.1969 REMARK 3 T33: 0.2750 T12: 0.0076 REMARK 3 T13: 0.0212 T23: 0.0379 REMARK 3 L TENSOR REMARK 3 L11: 3.9982 L22: 4.7347 REMARK 3 L33: 3.6190 L12: -0.6913 REMARK 3 L13: -1.3180 L23: -1.3676 REMARK 3 S TENSOR REMARK 3 S11: 0.0111 S12: -0.0325 S13: -0.0417 REMARK 3 S21: -0.0869 S22: -0.1514 S23: -0.3202 REMARK 3 S31: 0.0750 S32: 0.1735 S33: 0.1451 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 73 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.0154 9.3322 -57.4857 REMARK 3 T TENSOR REMARK 3 T11: 0.1510 T22: 0.2157 REMARK 3 T33: 0.2332 T12: -0.0102 REMARK 3 T13: -0.0413 T23: -0.0348 REMARK 3 L TENSOR REMARK 3 L11: 0.8788 L22: 5.3530 REMARK 3 L33: 3.3400 L12: -0.4221 REMARK 3 L13: -1.7104 L23: -0.8575 REMARK 3 S TENSOR REMARK 3 S11: 0.1302 S12: 0.0476 S13: 0.1000 REMARK 3 S21: -0.3201 S22: -0.1037 S23: 0.1680 REMARK 3 S31: -0.0492 S32: -0.1298 S33: -0.0612 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 35 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.1300 32.3664 -22.5728 REMARK 3 T TENSOR REMARK 3 T11: 0.6227 T22: 0.2902 REMARK 3 T33: 0.3196 T12: -0.0942 REMARK 3 T13: -0.0493 T23: 0.0266 REMARK 3 L TENSOR REMARK 3 L11: 2.3561 L22: 8.9791 REMARK 3 L33: 7.0396 L12: -0.7406 REMARK 3 L13: -0.9163 L23: 3.3615 REMARK 3 S TENSOR REMARK 3 S11: 0.0431 S12: -0.2972 S13: 0.0488 REMARK 3 S21: 0.5643 S22: -0.4795 S23: -0.0989 REMARK 3 S31: -0.3866 S32: 0.2717 S33: 0.3243 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 49 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.8017 23.5450 -21.6256 REMARK 3 T TENSOR REMARK 3 T11: 0.5634 T22: 0.2855 REMARK 3 T33: 0.2730 T12: -0.0477 REMARK 3 T13: -0.0012 T23: 0.0468 REMARK 3 L TENSOR REMARK 3 L11: 4.7522 L22: 4.3699 REMARK 3 L33: 2.9902 L12: 1.6759 REMARK 3 L13: 1.0736 L23: 0.7066 REMARK 3 S TENSOR REMARK 3 S11: 0.1559 S12: -0.3817 S13: -0.0075 REMARK 3 S21: 0.4967 S22: -0.1315 S23: -0.2948 REMARK 3 S31: -0.5860 S32: 0.2274 S33: -0.0772 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 73 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.6712 28.0524 -19.4225 REMARK 3 T TENSOR REMARK 3 T11: 0.6875 T22: 0.3681 REMARK 3 T33: 0.4774 T12: -0.1597 REMARK 3 T13: -0.1096 T23: 0.0396 REMARK 3 L TENSOR REMARK 3 L11: 7.9971 L22: 7.9772 REMARK 3 L33: 3.6325 L12: 1.8377 REMARK 3 L13: 0.1525 L23: 1.4485 REMARK 3 S TENSOR REMARK 3 S11: 0.1701 S12: -0.5713 S13: 0.9406 REMARK 3 S21: 0.1814 S22: -0.4230 S23: -0.8310 REMARK 3 S31: -0.7723 S32: 0.6671 S33: 0.1473 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 86 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.1087 16.6278 -26.6377 REMARK 3 T TENSOR REMARK 3 T11: 0.3536 T22: 0.3006 REMARK 3 T33: 0.3054 T12: -0.0148 REMARK 3 T13: 0.0414 T23: -0.0515 REMARK 3 L TENSOR REMARK 3 L11: 4.0845 L22: 5.3181 REMARK 3 L33: 5.4483 L12: -0.8135 REMARK 3 L13: -0.7595 L23: 0.2756 REMARK 3 S TENSOR REMARK 3 S11: 0.1249 S12: -0.1060 S13: 0.1002 REMARK 3 S21: 0.6433 S22: -0.3297 S23: 0.3493 REMARK 3 S31: -0.0426 S32: -0.7332 S33: 0.2041 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 36 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.2264 10.4672 -3.7871 REMARK 3 T TENSOR REMARK 3 T11: 0.8968 T22: 0.4736 REMARK 3 T33: 0.5473 T12: 0.0122 REMARK 3 T13: -0.0806 T23: 0.0846 REMARK 3 L TENSOR REMARK 3 L11: 4.9312 L22: 3.2157 REMARK 3 L33: 8.8153 L12: 1.1619 REMARK 3 L13: -0.0844 L23: 1.3949 REMARK 3 S TENSOR REMARK 3 S11: 0.1793 S12: -0.4439 S13: -0.5059 REMARK 3 S21: 1.1671 S22: -0.5455 S23: -0.5015 REMARK 3 S31: 1.3156 S32: 0.5541 S33: 0.2734 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 57 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.9314 15.4243 -1.1087 REMARK 3 T TENSOR REMARK 3 T11: 0.8392 T22: 0.3960 REMARK 3 T33: 0.3281 T12: 0.0094 REMARK 3 T13: 0.0633 T23: -0.0080 REMARK 3 L TENSOR REMARK 3 L11: 5.5598 L22: 5.0658 REMARK 3 L33: 3.9056 L12: 2.0236 REMARK 3 L13: 1.2067 L23: -0.0860 REMARK 3 S TENSOR REMARK 3 S11: -0.0729 S12: -0.3282 S13: -0.0724 REMARK 3 S21: 0.8520 S22: -0.1053 S23: -0.1750 REMARK 3 S31: 0.1514 S32: 0.1479 S33: 0.1267 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 86 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.5040 7.3632 -6.0809 REMARK 3 T TENSOR REMARK 3 T11: 0.7538 T22: 0.4665 REMARK 3 T33: 0.5738 T12: -0.0842 REMARK 3 T13: 0.1415 T23: -0.0295 REMARK 3 L TENSOR REMARK 3 L11: 3.6055 L22: 7.4512 REMARK 3 L33: 6.5799 L12: -0.7062 REMARK 3 L13: 2.8991 L23: -3.8468 REMARK 3 S TENSOR REMARK 3 S11: -0.0753 S12: -0.0041 S13: -0.3761 REMARK 3 S21: 0.6155 S22: 0.3613 S23: 0.9241 REMARK 3 S31: 0.6103 S32: -0.8078 S33: -0.3702 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6BN0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-NOV-17. REMARK 100 THE DEPOSITION ID IS D_1000231026. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.11583 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28654 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 60.111 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 3.646 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.6900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.72 REMARK 200 R MERGE FOR SHELL (I) : 0.61200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.120 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4Z4A REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS:HCL, PH 8.5, 30% PEG 4000, REMARK 280 0.8 M LICL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 20.54050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS B 112 REMARK 465 THR B 113 REMARK 465 GLN D 35 REMARK 465 LYS D 112 REMARK 465 THR D 113 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 352 O HOH B 367 2.03 REMARK 500 O HOH A 367 O HOH B 344 2.10 REMARK 500 O HOH A 360 O HOH C 331 2.11 REMARK 500 O HOH A 333 O HOH A 358 2.11 REMARK 500 O HOH A 301 O HOH A 356 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 98 -87.45 -105.26 REMARK 500 LYS B 98 -88.71 -107.66 REMARK 500 LYS C 49 17.50 55.33 REMARK 500 LYS C 98 -87.62 -104.89 REMARK 500 LYS D 49 16.93 58.41 REMARK 500 LYS D 98 -90.13 -108.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C 360 DISTANCE = 6.44 ANGSTROMS DBREF 6BN0 A 35 113 UNP Q00363 AVR4_PASFU 35 113 DBREF 6BN0 B 35 113 UNP Q00363 AVR4_PASFU 35 113 DBREF 6BN0 C 35 113 UNP Q00363 AVR4_PASFU 35 113 DBREF 6BN0 D 35 113 UNP Q00363 AVR4_PASFU 35 113 SEQRES 1 A 79 GLN PRO TYR ASN PRO CYS LYS PRO GLN GLU VAL ILE ASP SEQRES 2 A 79 THR LYS CYS MET GLY PRO LYS ASP CYS LEU TYR PRO ASN SEQRES 3 A 79 PRO ASP SER CYS THR THR TYR ILE GLN CYS VAL PRO LEU SEQRES 4 A 79 ASP GLU VAL GLY ASN ALA LYS PRO VAL VAL LYS PRO CYS SEQRES 5 A 79 PRO LYS GLY LEU GLN TRP ASN ASP ASN VAL GLY LYS LYS SEQRES 6 A 79 TRP CYS ASP TYR PRO ASN LEU SER THR CYS PRO VAL LYS SEQRES 7 A 79 THR SEQRES 1 B 79 GLN PRO TYR ASN PRO CYS LYS PRO GLN GLU VAL ILE ASP SEQRES 2 B 79 THR LYS CYS MET GLY PRO LYS ASP CYS LEU TYR PRO ASN SEQRES 3 B 79 PRO ASP SER CYS THR THR TYR ILE GLN CYS VAL PRO LEU SEQRES 4 B 79 ASP GLU VAL GLY ASN ALA LYS PRO VAL VAL LYS PRO CYS SEQRES 5 B 79 PRO LYS GLY LEU GLN TRP ASN ASP ASN VAL GLY LYS LYS SEQRES 6 B 79 TRP CYS ASP TYR PRO ASN LEU SER THR CYS PRO VAL LYS SEQRES 7 B 79 THR SEQRES 1 C 79 GLN PRO TYR ASN PRO CYS LYS PRO GLN GLU VAL ILE ASP SEQRES 2 C 79 THR LYS CYS MET GLY PRO LYS ASP CYS LEU TYR PRO ASN SEQRES 3 C 79 PRO ASP SER CYS THR THR TYR ILE GLN CYS VAL PRO LEU SEQRES 4 C 79 ASP GLU VAL GLY ASN ALA LYS PRO VAL VAL LYS PRO CYS SEQRES 5 C 79 PRO LYS GLY LEU GLN TRP ASN ASP ASN VAL GLY LYS LYS SEQRES 6 C 79 TRP CYS ASP TYR PRO ASN LEU SER THR CYS PRO VAL LYS SEQRES 7 C 79 THR SEQRES 1 D 79 GLN PRO TYR ASN PRO CYS LYS PRO GLN GLU VAL ILE ASP SEQRES 2 D 79 THR LYS CYS MET GLY PRO LYS ASP CYS LEU TYR PRO ASN SEQRES 3 D 79 PRO ASP SER CYS THR THR TYR ILE GLN CYS VAL PRO LEU SEQRES 4 D 79 ASP GLU VAL GLY ASN ALA LYS PRO VAL VAL LYS PRO CYS SEQRES 5 D 79 PRO LYS GLY LEU GLN TRP ASN ASP ASN VAL GLY LYS LYS SEQRES 6 D 79 TRP CYS ASP TYR PRO ASN LEU SER THR CYS PRO VAL LYS SEQRES 7 D 79 THR HET NAG E 1 15 HET NAG E 2 14 HET NAG E 3 14 HET NAG E 4 14 HET NAG E 5 14 HET NAG E 6 14 HET NAG F 1 15 HET NAG F 2 14 HET NAG F 3 14 HET NAG F 4 14 HET NAG F 5 14 HET NAG F 6 14 HET NAG G 1 15 HET NAG G 2 14 HET NAG G 3 14 HET NAG G 4 14 HET NAG G 5 14 HET NAG G 6 14 HET NAG H 1 15 HET NAG H 2 14 HET NAG H 3 14 HET NAG H 4 14 HET NAG H 5 14 HET NAG H 6 14 HET CL A 207 1 HET CL A 208 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CL CHLORIDE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 5 NAG 24(C8 H15 N O6) FORMUL 9 CL 2(CL 1-) FORMUL 11 HOH *226(H2 O) HELIX 1 AA1 LYS A 41 LYS A 49 1 9 HELIX 2 AA2 TYR A 103 SER A 107 5 5 HELIX 3 AA3 LYS B 41 LYS B 49 1 9 HELIX 4 AA4 TYR B 103 SER B 107 5 5 HELIX 5 AA5 LYS C 41 LYS C 49 1 9 HELIX 6 AA6 TYR C 103 SER C 107 5 5 HELIX 7 AA7 LYS D 41 LYS D 49 1 9 HELIX 8 AA8 TYR D 103 SER D 107 5 5 SHEET 1 AA1 3 LEU A 57 PRO A 59 0 SHEET 2 AA1 3 THR A 66 PRO A 72 -1 O ILE A 68 N TYR A 58 SHEET 3 AA1 3 ALA A 79 PRO A 85 -1 O LYS A 84 N TYR A 67 SHEET 1 AA2 2 GLN A 91 ASN A 93 0 SHEET 2 AA2 2 TRP A 100 ASP A 102 -1 O ASP A 102 N GLN A 91 SHEET 1 AA3 3 LEU B 57 ASN B 60 0 SHEET 2 AA3 3 SER B 63 PRO B 72 -1 O ILE B 68 N TYR B 58 SHEET 3 AA3 3 ALA B 79 PRO B 85 -1 O LYS B 84 N TYR B 67 SHEET 1 AA4 2 GLN B 91 ASN B 93 0 SHEET 2 AA4 2 TRP B 100 ASP B 102 -1 O ASP B 102 N GLN B 91 SHEET 1 AA5 3 LEU C 57 PRO C 59 0 SHEET 2 AA5 3 THR C 66 PRO C 72 -1 O ILE C 68 N TYR C 58 SHEET 3 AA5 3 ALA C 79 PRO C 85 -1 O LYS C 84 N TYR C 67 SHEET 1 AA6 2 GLN C 91 ASN C 93 0 SHEET 2 AA6 2 TRP C 100 ASP C 102 -1 O ASP C 102 N GLN C 91 SHEET 1 AA7 3 LEU D 57 PRO D 59 0 SHEET 2 AA7 3 THR D 66 PRO D 72 -1 O ILE D 68 N TYR D 58 SHEET 3 AA7 3 ALA D 79 PRO D 85 -1 O LYS D 84 N TYR D 67 SHEET 1 AA8 2 GLN D 91 ASN D 93 0 SHEET 2 AA8 2 TRP D 100 ASP D 102 -1 O ASP D 102 N GLN D 91 SSBOND 1 CYS A 40 CYS A 70 1555 1555 2.02 SSBOND 2 CYS A 50 CYS A 56 1555 1555 2.08 SSBOND 3 CYS A 64 CYS A 109 1555 1555 2.06 SSBOND 4 CYS A 86 CYS A 101 1555 1555 2.15 SSBOND 5 CYS B 40 CYS B 70 1555 1555 2.00 SSBOND 6 CYS B 50 CYS B 56 1555 1555 2.09 SSBOND 7 CYS B 64 CYS B 109 1555 1555 2.07 SSBOND 8 CYS B 86 CYS B 101 1555 1555 2.15 SSBOND 9 CYS C 40 CYS C 70 1555 1555 2.01 SSBOND 10 CYS C 50 CYS C 56 1555 1555 2.05 SSBOND 11 CYS C 64 CYS C 109 1555 1555 2.09 SSBOND 12 CYS C 86 CYS C 101 1555 1555 2.12 SSBOND 13 CYS D 40 CYS D 70 1555 1555 2.02 SSBOND 14 CYS D 50 CYS D 56 1555 1555 2.05 SSBOND 15 CYS D 64 CYS D 109 1555 1555 2.04 SSBOND 16 CYS D 86 CYS D 101 1555 1555 2.09 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.40 LINK O4 NAG E 2 C1 NAG E 3 1555 1555 1.42 LINK O4 NAG E 3 C1 NAG E 4 1555 1555 1.45 LINK O4 NAG E 4 C1 NAG E 5 1555 1555 1.43 LINK O4 NAG E 5 C1 NAG E 6 1555 1555 1.43 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.41 LINK O4 NAG F 2 C1 NAG F 3 1555 1555 1.42 LINK O4 NAG F 3 C1 NAG F 4 1555 1555 1.43 LINK O4 NAG F 4 C1 NAG F 5 1555 1555 1.42 LINK O4 NAG F 5 C1 NAG F 6 1555 1555 1.42 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.41 LINK O4 NAG G 2 C1 NAG G 3 1555 1555 1.41 LINK O4 NAG G 3 C1 NAG G 4 1555 1555 1.42 LINK O4 NAG G 4 C1 NAG G 5 1555 1555 1.44 LINK O4 NAG G 5 C1 NAG G 6 1555 1555 1.43 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.43 LINK O4 NAG H 2 C1 NAG H 3 1555 1555 1.42 LINK O4 NAG H 3 C1 NAG H 4 1555 1555 1.42 LINK O4 NAG H 4 C1 NAG H 5 1555 1555 1.41 LINK O4 NAG H 5 C1 NAG H 6 1555 1555 1.44 CRYST1 39.864 41.081 121.365 90.00 97.87 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025085 0.000000 0.003467 0.00000 SCALE2 0.000000 0.024342 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008318 0.00000