HEADER TRANSFERASE 20-NOV-17 6BOL TITLE CRYSTAL STRUCTURE OF MUTANT 2-METHYLCITRATE SYNTHASE MCSAG419A FROM TITLE 2 ASPERGILLUS FUMIGATUS. COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2-METHYLCITRATE SYNTHASE, MITOCHONDRIAL; COMPND 3 CHAIN: B, A; COMPND 4 SYNONYM: METHYLCITRATE SYNTHASE,(2S,3S)-2-METHYLCITRATE SYNTHASE, COMPND 5 CITRATE SYNTHASE 2; COMPND 6 EC: 2.3.3.5,2.3.3.16; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEOSARTORYA FUMIGATA (STRAIN CEA10 / CBS 144.89 SOURCE 3 / FGSC A1163); SOURCE 4 ORGANISM_COMMON: ASPERGILLUS FUMIGATUS; SOURCE 5 ORGANISM_TAXID: 451804; SOURCE 6 STRAIN: CEA10 / CBS 144.89 / FGSC A1163; SOURCE 7 GENE: MCSA, AFUB_094700; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MCSA, 2-METHYLCITRATE SYNTHASE, CITRATE SYNTHASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.SCHLACHTER,M.CHRUSZCZ REVDAT 3 13-MAR-24 6BOL 1 REMARK REVDAT 2 17-JUN-20 6BOL 1 JRNL REVDAT 1 28-NOV-18 6BOL 0 JRNL AUTH C.R.SCHLACHTER,V.KLAPPER,T.RADFORD,M.CHRUSZCZ JRNL TITL COMPARATIVE STUDIES OF ASPERGILLUS FUMIGATUS 2-METHYLCITRATE JRNL TITL 2 SYNTHASE AND HUMAN CITRATE SYNTHASE. JRNL REF BIOL.CHEM. V. 400 1567 2019 JRNL REFN ISSN 1431-6730 JRNL PMID 31141475 JRNL DOI 10.1515/HSZ-2019-0106 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 3 NUMBER OF REFLECTIONS : 41927 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.262 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 2119 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2364 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 74.07 REMARK 3 BIN R VALUE (WORKING SET) : 0.2250 REMARK 3 BIN FREE R VALUE SET COUNT : 124 REMARK 3 BIN FREE R VALUE : 0.2690 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6717 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 224 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.22 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.34000 REMARK 3 B22 (A**2) : -0.04000 REMARK 3 B33 (A**2) : -0.31000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.327 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.243 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.929 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.892 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6909 ; 0.016 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 6447 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9387 ; 1.711 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): 14961 ; 3.745 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 865 ; 6.260 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 296 ;38.853 ;24.189 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1140 ;13.760 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ;20.113 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1041 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7687 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1365 ; 0.011 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3466 ; 1.058 ; 2.050 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3465 ; 1.058 ; 2.050 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4329 ; 1.823 ; 3.071 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4330 ; 1.823 ; 3.071 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3443 ; 1.260 ; 2.264 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3429 ; 1.223 ; 2.239 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 5040 ; 2.042 ; 3.290 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 7810 ; 3.852 ;24.337 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 7811 ; 3.852 ;24.351 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 B 32 463 A 32 463 27148 0.09 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 32 A 311 REMARK 3 ORIGIN FOR THE GROUP (A): -10.0150 10.3560 -36.5060 REMARK 3 T TENSOR REMARK 3 T11: 0.0287 T22: 0.0234 REMARK 3 T33: 0.0574 T12: -0.0115 REMARK 3 T13: -0.0006 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 0.5538 L22: 0.6357 REMARK 3 L33: 0.8441 L12: 0.2501 REMARK 3 L13: 0.2687 L23: 0.1606 REMARK 3 S TENSOR REMARK 3 S11: -0.0008 S12: 0.0658 S13: 0.0080 REMARK 3 S21: -0.0239 S22: -0.0266 S23: 0.0056 REMARK 3 S31: -0.0885 S32: 0.0383 S33: 0.0274 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 312 A 423 REMARK 3 ORIGIN FOR THE GROUP (A): -27.4150 30.3410 -29.7660 REMARK 3 T TENSOR REMARK 3 T11: 0.0638 T22: 0.0163 REMARK 3 T33: 0.1058 T12: -0.0079 REMARK 3 T13: -0.0135 T23: -0.0077 REMARK 3 L TENSOR REMARK 3 L11: 1.7513 L22: 1.5551 REMARK 3 L33: 2.1816 L12: -1.1815 REMARK 3 L13: -1.2032 L23: 0.8463 REMARK 3 S TENSOR REMARK 3 S11: -0.1141 S12: -0.0188 S13: -0.0172 REMARK 3 S21: -0.0131 S22: 0.1101 S23: 0.0917 REMARK 3 S31: -0.0887 S32: 0.0247 S33: 0.0041 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 424 A 464 REMARK 3 ORIGIN FOR THE GROUP (A): -3.5670 14.3680 -26.0250 REMARK 3 T TENSOR REMARK 3 T11: 0.2015 T22: 0.0944 REMARK 3 T33: 0.1074 T12: -0.1008 REMARK 3 T13: 0.0055 T23: 0.0116 REMARK 3 L TENSOR REMARK 3 L11: 0.5605 L22: 0.7340 REMARK 3 L33: 1.5378 L12: -0.0955 REMARK 3 L13: -0.8798 L23: 0.2232 REMARK 3 S TENSOR REMARK 3 S11: 0.0376 S12: -0.0004 S13: -0.0053 REMARK 3 S21: 0.0580 S22: -0.0166 S23: 0.0007 REMARK 3 S31: -0.2187 S32: 0.0940 S33: -0.0210 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 31 B 310 REMARK 3 ORIGIN FOR THE GROUP (A): -5.9600 6.5510 -5.9420 REMARK 3 T TENSOR REMARK 3 T11: 0.0391 T22: 0.0104 REMARK 3 T33: 0.0513 T12: -0.0121 REMARK 3 T13: 0.0040 T23: -0.0005 REMARK 3 L TENSOR REMARK 3 L11: 0.5311 L22: 0.4649 REMARK 3 L33: 1.0423 L12: 0.0572 REMARK 3 L13: 0.0990 L23: -0.0738 REMARK 3 S TENSOR REMARK 3 S11: -0.0160 S12: -0.0436 S13: 0.0144 REMARK 3 S21: 0.0636 S22: -0.0072 S23: 0.0102 REMARK 3 S31: -0.0371 S32: 0.0324 S33: 0.0232 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 311 B 423 REMARK 3 ORIGIN FOR THE GROUP (A): 18.0200 -7.1720 -9.4370 REMARK 3 T TENSOR REMARK 3 T11: 0.1167 T22: 0.1324 REMARK 3 T33: 0.2342 T12: -0.0633 REMARK 3 T13: 0.0631 T23: -0.0962 REMARK 3 L TENSOR REMARK 3 L11: 3.0655 L22: 1.4549 REMARK 3 L33: 1.8246 L12: 0.1784 REMARK 3 L13: -2.0519 L23: 0.0901 REMARK 3 S TENSOR REMARK 3 S11: -0.2226 S12: 0.0080 S13: -0.2862 REMARK 3 S21: -0.0093 S22: 0.2876 S23: -0.2368 REMARK 3 S31: 0.0300 S32: 0.1908 S33: -0.0650 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 424 B 464 REMARK 3 ORIGIN FOR THE GROUP (A): -2.5380 13.5090 -16.5990 REMARK 3 T TENSOR REMARK 3 T11: 0.0893 T22: 0.0293 REMARK 3 T33: 0.0657 T12: -0.0056 REMARK 3 T13: -0.0142 T23: 0.0021 REMARK 3 L TENSOR REMARK 3 L11: 0.9543 L22: 0.1827 REMARK 3 L33: 0.5566 L12: 0.0928 REMARK 3 L13: -0.0093 L23: 0.2909 REMARK 3 S TENSOR REMARK 3 S11: -0.0587 S12: 0.0018 S13: 0.0172 REMARK 3 S21: -0.0290 S22: 0.0370 S23: 0.0028 REMARK 3 S31: -0.0897 S32: 0.0353 S33: 0.0216 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6BOL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-NOV-17. REMARK 100 THE DEPOSITION ID IS D_1000230047. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-APR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47254 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.24900 REMARK 200 R SYM (I) : 0.24900 REMARK 200 FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.87200 REMARK 200 R SYM FOR SHELL (I) : 0.87200 REMARK 200 FOR SHELL : 2.970 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: MOLREP, HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH 7.5 25% PEG3350, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.82050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.57450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 51.79750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.57450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.82050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 51.79750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -99.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER B 25 REMARK 465 GLY B 26 REMARK 465 SER B 27 REMARK 465 GLY B 28 REMARK 465 SER B 29 REMARK 465 THR B 30 REMARK 465 LYS B 465 REMARK 465 SER A 25 REMARK 465 GLY A 26 REMARK 465 SER A 27 REMARK 465 GLY A 28 REMARK 465 SER A 29 REMARK 465 THR A 30 REMARK 465 ALA A 31 REMARK 465 LYS A 465 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 250 CG CD CE NZ REMARK 470 LYS B 326 CG CD CE NZ REMARK 470 ARG B 355 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 401 CG CD CE NZ REMARK 470 LYS A 250 CG CD CE NZ REMARK 470 LYS A 322 CG CD CE NZ REMARK 470 LYS A 326 CG CD CE NZ REMARK 470 ARG A 355 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 356 CG CD CE NZ REMARK 470 LYS A 401 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 140 NE - CZ - NH2 ANGL. DEV. = 3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET B 73 15.51 58.74 REMARK 500 HIS B 269 60.60 -157.58 REMARK 500 GLU B 270 173.62 75.30 REMARK 500 ASN B 402 81.77 24.47 REMARK 500 PRO B 403 49.06 -84.41 REMARK 500 PHE B 420 68.36 -100.85 REMARK 500 GLN B 421 40.98 -106.41 REMARK 500 ARG A 56 32.62 -98.01 REMARK 500 MET A 73 18.60 57.11 REMARK 500 HIS A 269 58.42 -154.89 REMARK 500 GLU A 270 177.83 72.60 REMARK 500 HIS A 305 -95.62 -125.58 REMARK 500 LYS A 326 33.89 -98.14 REMARK 500 PRO A 403 42.61 -84.51 REMARK 500 PHE A 420 69.48 -102.59 REMARK 500 GLN A 421 34.93 -98.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OAA A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OAA A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 505 DBREF 6BOL B 29 465 UNP B0YD89 PRPC_ASPFC 29 465 DBREF 6BOL A 29 465 UNP B0YD89 PRPC_ASPFC 29 465 SEQADV 6BOL SER B 25 UNP B0YD89 EXPRESSION TAG SEQADV 6BOL GLY B 26 UNP B0YD89 EXPRESSION TAG SEQADV 6BOL SER B 27 UNP B0YD89 EXPRESSION TAG SEQADV 6BOL GLY B 28 UNP B0YD89 EXPRESSION TAG SEQADV 6BOL ALA B 419 UNP B0YD89 GLY 419 ENGINEERED MUTATION SEQADV 6BOL SER A 25 UNP B0YD89 EXPRESSION TAG SEQADV 6BOL GLY A 26 UNP B0YD89 EXPRESSION TAG SEQADV 6BOL SER A 27 UNP B0YD89 EXPRESSION TAG SEQADV 6BOL GLY A 28 UNP B0YD89 EXPRESSION TAG SEQADV 6BOL ALA A 419 UNP B0YD89 GLY 419 ENGINEERED MUTATION SEQRES 1 B 441 SER GLY SER GLY SER THR ALA GLU PRO ASP LEU LYS THR SEQRES 2 B 441 ALA LEU LYS ALA VAL ILE PRO ALA LYS ARG GLU LEU PHE SEQRES 3 B 441 LYS GLN VAL LYS GLU ARG SER ASP GLU VAL ILE GLY GLU SEQRES 4 B 441 VAL LYS VAL ALA ASN VAL ILE GLY GLY MET ARG GLY LEU SEQRES 5 B 441 LYS SER MET LEU TRP GLU GLY SER VAL LEU ASP PRO GLU SEQRES 6 B 441 GLU GLY ILE ARG PHE HIS GLY LYS THR ILE LYS ASP CYS SEQRES 7 B 441 GLN LYS GLU LEU PRO LYS GLY THR SER GLY THR GLU MET SEQRES 8 B 441 LEU PRO GLU ALA MET PHE TRP LEU LEU LEU THR GLY GLN SEQRES 9 B 441 VAL PRO SER THR ASN GLN VAL ARG ALA PHE SER ARG GLU SEQRES 10 B 441 LEU ALA GLU GLN SER HIS LEU PRO GLN HIS ILE LEU ASP SEQRES 11 B 441 LEU ILE LYS SER PHE PRO ARG SER MET HIS PRO MET THR SEQRES 12 B 441 GLN LEU SER ILE ALA VAL ALA ALA LEU ASN THR GLU SER SEQRES 13 B 441 LYS PHE ALA LYS ALA TYR GLU LYS GLY LEU SER LYS ALA SEQRES 14 B 441 ASP TYR TRP GLU PRO THR PHE ASP ASP SER ILE SER LEU SEQRES 15 B 441 LEU ALA LYS ILE PRO ARG VAL ALA ALA LEU VAL PHE ARG SEQRES 16 B 441 PRO ASP GLU VAL ASP GLN VAL GLY THR GLN ALA LEU ASP SEQRES 17 B 441 ALA SER GLN ASP TRP SER TYR ASN PHE ALA GLU LEU LEU SEQRES 18 B 441 GLY LYS GLY GLY LYS GLU ASN GLN ASP PHE HIS ASP LEU SEQRES 19 B 441 LEU ARG LEU TYR LEU ALA LEU HIS GLY ASP HIS GLU GLY SEQRES 20 B 441 GLY ASN VAL SER ALA HIS ALA THR HIS LEU VAL GLY SER SEQRES 21 B 441 ALA LEU SER ASP PRO PHE LEU SER TYR SER ALA GLY LEU SEQRES 22 B 441 LEU GLY LEU ALA GLY PRO LEU HIS GLY LEU ALA ALA GLN SEQRES 23 B 441 GLU VAL LEU ARG TRP ILE LEU ALA MET GLN ASP LYS ILE SEQRES 24 B 441 GLY THR LYS PHE THR ASP ASP ASP VAL ARG ASN TYR LEU SEQRES 25 B 441 TRP ASP THR LEU LYS SER GLY ARG VAL VAL PRO GLY TYR SEQRES 26 B 441 GLY HIS GLY VAL LEU ARG LYS PRO ASP PRO ARG PHE GLN SEQRES 27 B 441 ALA LEU MET ASP PHE ALA ALA THR ARG PRO ASP VAL LEU SEQRES 28 B 441 ALA ASN PRO VAL PHE GLN LEU VAL LYS LYS ASN SER GLU SEQRES 29 B 441 ILE ALA PRO ALA VAL LEU THR GLU HIS GLY LYS THR LYS SEQRES 30 B 441 ASN PRO HIS PRO ASN VAL ASP ALA ALA SER GLY VAL LEU SEQRES 31 B 441 PHE TYR HIS TYR ALA PHE GLN GLN PRO LEU TYR TYR THR SEQRES 32 B 441 VAL THR PHE GLY VAL SER ARG ALA LEU GLY PRO LEU VAL SEQRES 33 B 441 GLN LEU ILE TRP ASP ARG ALA LEU GLY LEU PRO ILE GLU SEQRES 34 B 441 ARG PRO LYS SER ILE ASN LEU LEU GLY LEU LYS LYS SEQRES 1 A 441 SER GLY SER GLY SER THR ALA GLU PRO ASP LEU LYS THR SEQRES 2 A 441 ALA LEU LYS ALA VAL ILE PRO ALA LYS ARG GLU LEU PHE SEQRES 3 A 441 LYS GLN VAL LYS GLU ARG SER ASP GLU VAL ILE GLY GLU SEQRES 4 A 441 VAL LYS VAL ALA ASN VAL ILE GLY GLY MET ARG GLY LEU SEQRES 5 A 441 LYS SER MET LEU TRP GLU GLY SER VAL LEU ASP PRO GLU SEQRES 6 A 441 GLU GLY ILE ARG PHE HIS GLY LYS THR ILE LYS ASP CYS SEQRES 7 A 441 GLN LYS GLU LEU PRO LYS GLY THR SER GLY THR GLU MET SEQRES 8 A 441 LEU PRO GLU ALA MET PHE TRP LEU LEU LEU THR GLY GLN SEQRES 9 A 441 VAL PRO SER THR ASN GLN VAL ARG ALA PHE SER ARG GLU SEQRES 10 A 441 LEU ALA GLU GLN SER HIS LEU PRO GLN HIS ILE LEU ASP SEQRES 11 A 441 LEU ILE LYS SER PHE PRO ARG SER MET HIS PRO MET THR SEQRES 12 A 441 GLN LEU SER ILE ALA VAL ALA ALA LEU ASN THR GLU SER SEQRES 13 A 441 LYS PHE ALA LYS ALA TYR GLU LYS GLY LEU SER LYS ALA SEQRES 14 A 441 ASP TYR TRP GLU PRO THR PHE ASP ASP SER ILE SER LEU SEQRES 15 A 441 LEU ALA LYS ILE PRO ARG VAL ALA ALA LEU VAL PHE ARG SEQRES 16 A 441 PRO ASP GLU VAL ASP GLN VAL GLY THR GLN ALA LEU ASP SEQRES 17 A 441 ALA SER GLN ASP TRP SER TYR ASN PHE ALA GLU LEU LEU SEQRES 18 A 441 GLY LYS GLY GLY LYS GLU ASN GLN ASP PHE HIS ASP LEU SEQRES 19 A 441 LEU ARG LEU TYR LEU ALA LEU HIS GLY ASP HIS GLU GLY SEQRES 20 A 441 GLY ASN VAL SER ALA HIS ALA THR HIS LEU VAL GLY SER SEQRES 21 A 441 ALA LEU SER ASP PRO PHE LEU SER TYR SER ALA GLY LEU SEQRES 22 A 441 LEU GLY LEU ALA GLY PRO LEU HIS GLY LEU ALA ALA GLN SEQRES 23 A 441 GLU VAL LEU ARG TRP ILE LEU ALA MET GLN ASP LYS ILE SEQRES 24 A 441 GLY THR LYS PHE THR ASP ASP ASP VAL ARG ASN TYR LEU SEQRES 25 A 441 TRP ASP THR LEU LYS SER GLY ARG VAL VAL PRO GLY TYR SEQRES 26 A 441 GLY HIS GLY VAL LEU ARG LYS PRO ASP PRO ARG PHE GLN SEQRES 27 A 441 ALA LEU MET ASP PHE ALA ALA THR ARG PRO ASP VAL LEU SEQRES 28 A 441 ALA ASN PRO VAL PHE GLN LEU VAL LYS LYS ASN SER GLU SEQRES 29 A 441 ILE ALA PRO ALA VAL LEU THR GLU HIS GLY LYS THR LYS SEQRES 30 A 441 ASN PRO HIS PRO ASN VAL ASP ALA ALA SER GLY VAL LEU SEQRES 31 A 441 PHE TYR HIS TYR ALA PHE GLN GLN PRO LEU TYR TYR THR SEQRES 32 A 441 VAL THR PHE GLY VAL SER ARG ALA LEU GLY PRO LEU VAL SEQRES 33 A 441 GLN LEU ILE TRP ASP ARG ALA LEU GLY LEU PRO ILE GLU SEQRES 34 A 441 ARG PRO LYS SER ILE ASN LEU LEU GLY LEU LYS LYS HET PO4 B 501 5 HET OAA A 501 9 HET OAA A 502 9 HET PO4 A 503 5 HET PO4 A 504 5 HET CL A 505 1 HETNAM PO4 PHOSPHATE ION HETNAM OAA OXALOACETATE ION HETNAM CL CHLORIDE ION FORMUL 3 PO4 3(O4 P 3-) FORMUL 4 OAA 2(C4 H3 O5 1-) FORMUL 8 CL CL 1- FORMUL 9 HOH *224(H2 O) HELIX 1 AA1 ASP B 34 GLU B 55 1 22 HELIX 2 AA2 VAL B 66 GLY B 71 1 6 HELIX 3 AA3 THR B 98 LEU B 106 1 9 HELIX 4 AA4 LEU B 116 GLY B 127 1 12 HELIX 5 AA5 SER B 131 GLN B 145 1 15 HELIX 6 AA6 PRO B 149 PHE B 159 1 11 HELIX 7 AA7 HIS B 164 LEU B 176 1 13 HELIX 8 AA8 ASN B 177 GLU B 179 5 3 HELIX 9 AA9 SER B 180 GLY B 189 1 10 HELIX 10 AB1 SER B 191 ASP B 194 5 4 HELIX 11 AB2 TYR B 195 ARG B 219 1 25 HELIX 12 AB3 GLU B 222 GLY B 227 1 6 HELIX 13 AB4 ASP B 236 LEU B 245 1 10 HELIX 14 AB5 GLY B 249 GLU B 251 5 3 HELIX 15 AB6 ASN B 252 HIS B 266 1 15 HELIX 16 AB7 ASN B 273 ALA B 285 1 13 HELIX 17 AB8 ASP B 288 ALA B 301 1 14 HELIX 18 AB9 GLY B 302 LEU B 307 1 6 HELIX 19 AC1 LEU B 307 GLY B 324 1 18 HELIX 20 AC2 THR B 328 SER B 342 1 15 HELIX 21 AC3 ASP B 358 THR B 370 1 13 HELIX 22 AC4 ARG B 371 ALA B 376 1 6 HELIX 23 AC5 ASN B 377 GLY B 398 1 22 HELIX 24 AC6 VAL B 407 TYR B 418 1 12 HELIX 25 AC7 GLN B 422 LEU B 424 5 3 HELIX 26 AC8 TYR B 425 ARG B 434 1 10 HELIX 27 AC9 ALA B 435 GLY B 449 1 15 HELIX 28 AD1 ASN B 459 LYS B 464 1 6 HELIX 29 AD2 ASP A 34 GLU A 55 1 22 HELIX 30 AD3 VAL A 66 GLY A 71 1 6 HELIX 31 AD4 THR A 98 LEU A 106 1 9 HELIX 32 AD5 LEU A 116 GLY A 127 1 12 HELIX 33 AD6 SER A 131 GLN A 145 1 15 HELIX 34 AD7 PRO A 149 PHE A 159 1 11 HELIX 35 AD8 HIS A 164 LEU A 176 1 13 HELIX 36 AD9 ASN A 177 GLU A 179 5 3 HELIX 37 AE1 SER A 180 GLY A 189 1 10 HELIX 38 AE2 SER A 191 ASP A 194 5 4 HELIX 39 AE3 TYR A 195 ARG A 219 1 25 HELIX 40 AE4 GLU A 222 GLY A 227 1 6 HELIX 41 AE5 ASP A 236 LEU A 245 1 10 HELIX 42 AE6 GLY A 249 GLU A 251 5 3 HELIX 43 AE7 ASN A 252 GLY A 267 1 16 HELIX 44 AE8 ASN A 273 ALA A 285 1 13 HELIX 45 AE9 ASP A 288 ALA A 301 1 14 HELIX 46 AF1 LEU A 307 GLY A 324 1 18 HELIX 47 AF2 THR A 328 SER A 342 1 15 HELIX 48 AF3 ASP A 358 THR A 370 1 13 HELIX 49 AF4 ARG A 371 ALA A 376 1 6 HELIX 50 AF5 ASN A 377 GLY A 398 1 22 HELIX 51 AF6 VAL A 407 TYR A 418 1 12 HELIX 52 AF7 GLN A 422 LEU A 424 5 3 HELIX 53 AF8 TYR A 425 ARG A 434 1 10 HELIX 54 AF9 ALA A 435 GLY A 449 1 15 HELIX 55 AG1 ASN A 459 LYS A 464 1 6 SHEET 1 AA1 2 VAL B 60 LYS B 65 0 SHEET 2 AA1 2 VAL A 60 LYS A 65 -1 O VAL A 64 N ILE B 61 SHEET 1 AA2 2 LYS B 77 LEU B 80 0 SHEET 2 AA2 2 LYS A 456 ILE A 458 1 O ILE A 458 N MET B 79 SHEET 1 AA3 2 SER B 84 ASP B 87 0 SHEET 2 AA3 2 GLY B 91 PHE B 94 -1 O GLY B 91 N ASP B 87 SHEET 1 AA4 2 LYS B 456 ILE B 458 0 SHEET 2 AA4 2 LYS A 77 LEU A 80 1 O SER A 78 N LYS B 456 SHEET 1 AA5 2 SER A 84 ASP A 87 0 SHEET 2 AA5 2 GLY A 91 PHE A 94 -1 O GLY A 91 N ASP A 87 SITE 1 AC1 4 ARG A 344 GLY B 189 LEU B 190 SER B 191 SITE 1 AC2 4 LYS A 46 LEU A 49 HIS A 95 LEU B 461 SITE 1 AC3 4 ARG A 47 LYS A 192 ALA A 193 HOH A 660 SITE 1 AC4 2 LYS A 54 GLN A 421 SITE 1 AC5 7 HIS A 269 ASN A 273 HIS A 305 HIS A 351 SITE 2 AC5 7 HOH A 606 HOH A 616 ARG B 454 SITE 1 AC6 3 ASP A 34 LEU A 35 HOH A 662 CRYST1 63.641 103.595 135.149 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015713 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009653 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007399 0.00000