HEADER ENDOCYTOSIS 22-NOV-17 6BP6 TITLE CRYSTAL STRUCTURE OF COMMD9 COMM DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: COMM DOMAIN-CONTAINING PROTEIN 9; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: COMMD9, HSPC166; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS COPPER METABOLISM, COMM DOMAIN, CCC COMPLEX, COMMANDER COMPLEX, KEYWDS 2 MEMBRANE TRAFFICKING, RECYCLING, RETRIEVER, ENDOSOME, ENDOCYTOSIS EXPDTA X-RAY DIFFRACTION AUTHOR M.D.HEALY,M.CHANDRA,B.M.COLLINS,R.GHAI REVDAT 2 01-JAN-20 6BP6 1 REMARK REVDAT 1 15-AUG-18 6BP6 0 JRNL AUTH M.D.HEALY,M.K.HOSPENTHAL,R.J.HALL,M.CHANDRA,M.CHILTON, JRNL AUTH 2 V.TILLU,K.E.CHEN,D.J.CELLIGOI,F.J.MCDONALD,P.J.CULLEN, JRNL AUTH 3 J.S.LOTT,B.M.COLLINS,R.GHAI JRNL TITL STRUCTURAL INSIGHTS INTO THE ARCHITECTURE AND MEMBRANE JRNL TITL 2 INTERACTIONS OF THE CONSERVED COMMD PROTEINS. JRNL REF ELIFE V. 7 2018 JRNL REFN ESSN 2050-084X JRNL PMID 30067224 JRNL DOI 10.7554/ELIFE.35898 REMARK 2 REMARK 2 RESOLUTION. 2.17 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13RC1_2954: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.17 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.37 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 9527 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.251 REMARK 3 R VALUE (WORKING SET) : 0.248 REMARK 3 FREE R VALUE : 0.286 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.970 REMARK 3 FREE R VALUE TEST SET COUNT : 950 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.3687 - 4.1479 1.00 1271 140 0.2069 0.2383 REMARK 3 2 4.1479 - 3.2936 1.00 1264 135 0.2537 0.2795 REMARK 3 3 3.2936 - 2.8776 1.00 1239 145 0.2825 0.3217 REMARK 3 4 2.8776 - 2.6147 0.99 1250 137 0.2985 0.3575 REMARK 3 5 2.6147 - 2.4273 0.98 1207 130 0.3087 0.3621 REMARK 3 6 2.4273 - 2.2843 0.96 1211 133 0.3132 0.3926 REMARK 3 7 2.2843 - 2.1699 0.93 1135 130 0.3089 0.3906 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.540 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 1248 REMARK 3 ANGLE : 0.637 1682 REMARK 3 CHIRALITY : 0.043 212 REMARK 3 PLANARITY : 0.005 208 REMARK 3 DIHEDRAL : 15.906 792 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 5 THROUGH 21 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.6824 28.7608 9.8432 REMARK 3 T TENSOR REMARK 3 T11: 0.4070 T22: 0.4874 REMARK 3 T33: 0.4078 T12: -0.0969 REMARK 3 T13: 0.0593 T23: -0.0257 REMARK 3 L TENSOR REMARK 3 L11: 4.2567 L22: 4.0455 REMARK 3 L33: 1.2953 L12: -1.3811 REMARK 3 L13: 1.9596 L23: 2.4958 REMARK 3 S TENSOR REMARK 3 S11: 0.3683 S12: 0.2517 S13: -0.1320 REMARK 3 S21: -0.9062 S22: 0.0382 S23: 0.6938 REMARK 3 S31: -0.0517 S32: 0.1851 S33: -0.4560 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 22 THROUGH 29 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.5831 7.9043 28.1843 REMARK 3 T TENSOR REMARK 3 T11: 1.5572 T22: 2.1637 REMARK 3 T33: 1.1117 T12: 0.6244 REMARK 3 T13: 0.7237 T23: 0.0385 REMARK 3 L TENSOR REMARK 3 L11: 3.1914 L22: 2.3193 REMARK 3 L33: 0.5291 L12: -2.6976 REMARK 3 L13: 1.0912 L23: -1.0131 REMARK 3 S TENSOR REMARK 3 S11: -2.9486 S12: -0.8927 S13: 0.1468 REMARK 3 S21: 2.6186 S22: 0.9070 S23: 0.1588 REMARK 3 S31: -0.1582 S32: 0.7252 S33: 0.5148 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 30 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.3560 29.4119 11.3658 REMARK 3 T TENSOR REMARK 3 T11: 0.6217 T22: 0.6662 REMARK 3 T33: 0.6088 T12: 0.0158 REMARK 3 T13: -0.0260 T23: -0.0709 REMARK 3 L TENSOR REMARK 3 L11: 6.2091 L22: 8.9196 REMARK 3 L33: 6.1881 L12: 2.2614 REMARK 3 L13: -2.2800 L23: -1.3139 REMARK 3 S TENSOR REMARK 3 S11: 0.0678 S12: 0.2561 S13: 0.6705 REMARK 3 S21: 0.0628 S22: 0.2525 S23: 0.6519 REMARK 3 S31: -1.2109 S32: 0.1677 S33: -0.0566 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 62 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.0035 37.6565 16.2017 REMARK 3 T TENSOR REMARK 3 T11: 0.5117 T22: 0.7251 REMARK 3 T33: 1.0008 T12: -0.0732 REMARK 3 T13: 0.0044 T23: -0.1426 REMARK 3 L TENSOR REMARK 3 L11: 6.4471 L22: 5.7250 REMARK 3 L33: 4.8896 L12: -2.7439 REMARK 3 L13: 1.1267 L23: -6.0799 REMARK 3 S TENSOR REMARK 3 S11: -0.0631 S12: -1.0009 S13: -0.4701 REMARK 3 S21: -0.2020 S22: 0.6846 S23: 1.4328 REMARK 3 S31: 0.2012 S32: -0.6128 S33: -0.7612 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 8 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.0940 18.0155 22.8436 REMARK 3 T TENSOR REMARK 3 T11: 1.9013 T22: 0.0913 REMARK 3 T33: 1.3254 T12: 0.3405 REMARK 3 T13: 0.9256 T23: 0.5597 REMARK 3 L TENSOR REMARK 3 L11: 3.6776 L22: 0.2155 REMARK 3 L33: 0.1396 L12: -1.0828 REMARK 3 L13: 0.1085 L23: 0.0225 REMARK 3 S TENSOR REMARK 3 S11: -3.9370 S12: -1.4297 S13: -2.8243 REMARK 3 S21: 2.7163 S22: 1.5136 S23: 1.2794 REMARK 3 S31: 4.1567 S32: -0.4744 S33: 0.5093 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 9 THROUGH 21 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.4365 41.5337 18.5567 REMARK 3 T TENSOR REMARK 3 T11: 0.4591 T22: 0.5381 REMARK 3 T33: 0.7037 T12: -0.0066 REMARK 3 T13: 0.1466 T23: -0.0182 REMARK 3 L TENSOR REMARK 3 L11: 5.1030 L22: 5.2091 REMARK 3 L33: 6.4339 L12: -5.2759 REMARK 3 L13: 2.8509 L23: -2.3308 REMARK 3 S TENSOR REMARK 3 S11: -0.2734 S12: -0.0969 S13: -0.1474 REMARK 3 S21: 0.8510 S22: 0.1400 S23: 0.9396 REMARK 3 S31: 0.0292 S32: 0.0815 S33: -0.0608 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 22 THROUGH 29 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.7025 55.1251 0.6600 REMARK 3 T TENSOR REMARK 3 T11: 1.1836 T22: 2.1504 REMARK 3 T33: 1.4060 T12: -0.2397 REMARK 3 T13: -0.0427 T23: 0.4813 REMARK 3 L TENSOR REMARK 3 L11: 0.2712 L22: 1.9925 REMARK 3 L33: 2.0513 L12: -1.7338 REMARK 3 L13: -0.6625 L23: 0.8820 REMARK 3 S TENSOR REMARK 3 S11: -0.1149 S12: 3.8047 S13: 1.1938 REMARK 3 S21: 1.6541 S22: -1.7195 S23: 1.9789 REMARK 3 S31: 0.0245 S32: -6.0257 S33: 0.2730 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 30 THROUGH 41 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.4492 40.8443 16.6661 REMARK 3 T TENSOR REMARK 3 T11: 0.5588 T22: 0.5197 REMARK 3 T33: 0.6800 T12: -0.0325 REMARK 3 T13: 0.0664 T23: 0.0118 REMARK 3 L TENSOR REMARK 3 L11: 8.7914 L22: 7.3860 REMARK 3 L33: 2.8427 L12: -2.1936 REMARK 3 L13: 4.1779 L23: 0.2556 REMARK 3 S TENSOR REMARK 3 S11: 0.3126 S12: 0.8241 S13: -0.6959 REMARK 3 S21: 0.2119 S22: -0.3748 S23: 0.4153 REMARK 3 S31: 0.6369 S32: 0.7993 S33: 0.2142 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 42 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.6484 36.8212 18.6985 REMARK 3 T TENSOR REMARK 3 T11: 0.5194 T22: 0.6250 REMARK 3 T33: 0.5710 T12: -0.0345 REMARK 3 T13: -0.0526 T23: -0.1064 REMARK 3 L TENSOR REMARK 3 L11: 9.1485 L22: 6.9714 REMARK 3 L33: 7.8297 L12: -2.1255 REMARK 3 L13: 0.6173 L23: -0.3662 REMARK 3 S TENSOR REMARK 3 S11: -0.6119 S12: 0.6011 S13: 0.9298 REMARK 3 S21: 0.5141 S22: -0.2870 S23: -1.2042 REMARK 3 S31: 0.0335 S32: 2.4298 S33: 0.0512 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 62 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.9535 20.7924 12.0130 REMARK 3 T TENSOR REMARK 3 T11: 0.5334 T22: 0.6274 REMARK 3 T33: 1.3161 T12: -0.0251 REMARK 3 T13: -0.0384 T23: -0.0793 REMARK 3 L TENSOR REMARK 3 L11: 3.4117 L22: 4.0891 REMARK 3 L33: 4.9655 L12: -2.9155 REMARK 3 L13: 3.5313 L23: -0.1448 REMARK 3 S TENSOR REMARK 3 S11: 0.6109 S12: 1.3475 S13: -1.3391 REMARK 3 S21: -1.6436 S22: -0.3180 S23: 2.3219 REMARK 3 S31: 0.7674 S32: 0.0111 S33: -0.3173 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6BP6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1000231225. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9787 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9689 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.170 REMARK 200 RESOLUTION RANGE LOW (A) : 47.130 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 13.60 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.17 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES (PH 7.0), 6% JEFFAMINE M REMARK 280 -600, PH 8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 39.70200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 39.70200 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 29.28600 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 39.70200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 39.70200 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 29.28600 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 39.70200 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 39.70200 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 29.28600 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 39.70200 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 39.70200 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 29.28600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 24190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -187.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 79.40400 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 79.40400 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 79.40400 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 79.40400 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 107 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 ALA A 2 REMARK 465 ASN A 3 REMARK 465 GLN A 4 REMARK 465 PRO A 44 REMARK 465 SER A 45 REMARK 465 LEU A 46 REMARK 465 CYS A 47 REMARK 465 GLY A 48 REMARK 465 ASP A 49 REMARK 465 LYS A 50 REMARK 465 HIS A 90 REMARK 465 HIS A 91 REMARK 465 HIS A 92 REMARK 465 HIS A 93 REMARK 465 PRO B 44 REMARK 465 SER B 45 REMARK 465 LEU B 46 REMARK 465 CYS B 47 REMARK 465 GLY B 48 REMARK 465 ASP B 49 REMARK 465 LYS B 50 REMARK 465 HIS B 90 REMARK 465 HIS B 91 REMARK 465 HIS B 92 REMARK 465 HIS B 93 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 106 O HOH A 106 2565 2.13 REMARK 500 REMARK 500 REMARK: NULL DBREF 6BP6 A 2 85 UNP Q9P000 COMD9_HUMAN 115 198 DBREF 6BP6 B 2 85 UNP Q9P000 COMD9_HUMAN 115 198 SEQADV 6BP6 MSE A 1 UNP Q9P000 EXPRESSION TAG SEQADV 6BP6 LEU A 86 UNP Q9P000 EXPRESSION TAG SEQADV 6BP6 GLU A 87 UNP Q9P000 EXPRESSION TAG SEQADV 6BP6 HIS A 88 UNP Q9P000 EXPRESSION TAG SEQADV 6BP6 HIS A 89 UNP Q9P000 EXPRESSION TAG SEQADV 6BP6 HIS A 90 UNP Q9P000 EXPRESSION TAG SEQADV 6BP6 HIS A 91 UNP Q9P000 EXPRESSION TAG SEQADV 6BP6 HIS A 92 UNP Q9P000 EXPRESSION TAG SEQADV 6BP6 HIS A 93 UNP Q9P000 EXPRESSION TAG SEQADV 6BP6 MSE B 1 UNP Q9P000 EXPRESSION TAG SEQADV 6BP6 LEU B 86 UNP Q9P000 EXPRESSION TAG SEQADV 6BP6 GLU B 87 UNP Q9P000 EXPRESSION TAG SEQADV 6BP6 HIS B 88 UNP Q9P000 EXPRESSION TAG SEQADV 6BP6 HIS B 89 UNP Q9P000 EXPRESSION TAG SEQADV 6BP6 HIS B 90 UNP Q9P000 EXPRESSION TAG SEQADV 6BP6 HIS B 91 UNP Q9P000 EXPRESSION TAG SEQADV 6BP6 HIS B 92 UNP Q9P000 EXPRESSION TAG SEQADV 6BP6 HIS B 93 UNP Q9P000 EXPRESSION TAG SEQRES 1 A 93 MSE ALA ASN GLN ILE SER LEU PRO ARG LEU VAL ASP LEU SEQRES 2 A 93 ASP TRP ARG VAL ASP ILE LYS THR SER SER ASP SER ILE SEQRES 3 A 93 SER ARG MSE ALA VAL PRO THR CYS LEU LEU GLN MSE LYS SEQRES 4 A 93 ILE GLN GLU ASP PRO SER LEU CYS GLY ASP LYS PRO SER SEQRES 5 A 93 ILE SER ALA VAL THR VAL GLU LEU SER LYS GLU THR LEU SEQRES 6 A 93 ASP THR MSE LEU ASP GLY LEU GLY ARG ILE ARG ASP GLN SEQRES 7 A 93 LEU SER ALA VAL ALA SER LYS LEU GLU HIS HIS HIS HIS SEQRES 8 A 93 HIS HIS SEQRES 1 B 93 MSE ALA ASN GLN ILE SER LEU PRO ARG LEU VAL ASP LEU SEQRES 2 B 93 ASP TRP ARG VAL ASP ILE LYS THR SER SER ASP SER ILE SEQRES 3 B 93 SER ARG MSE ALA VAL PRO THR CYS LEU LEU GLN MSE LYS SEQRES 4 B 93 ILE GLN GLU ASP PRO SER LEU CYS GLY ASP LYS PRO SER SEQRES 5 B 93 ILE SER ALA VAL THR VAL GLU LEU SER LYS GLU THR LEU SEQRES 6 B 93 ASP THR MSE LEU ASP GLY LEU GLY ARG ILE ARG ASP GLN SEQRES 7 B 93 LEU SER ALA VAL ALA SER LYS LEU GLU HIS HIS HIS HIS SEQRES 8 B 93 HIS HIS MODRES 6BP6 MSE A 29 MET MODIFIED RESIDUE MODRES 6BP6 MSE A 38 MET MODIFIED RESIDUE MODRES 6BP6 MSE A 68 MET MODIFIED RESIDUE MODRES 6BP6 MSE B 29 MET MODIFIED RESIDUE MODRES 6BP6 MSE B 38 MET MODIFIED RESIDUE MODRES 6BP6 MSE B 68 MET MODIFIED RESIDUE HET MSE A 29 8 HET MSE A 38 8 HET MSE A 68 8 HET MSE B 1 8 HET MSE B 29 8 HET MSE B 38 8 HET MSE B 68 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 7(C5 H11 N O2 SE) FORMUL 3 HOH *9(H2 O) HELIX 1 AA1 SER A 61 HIS A 88 1 28 HELIX 2 AA2 SER B 61 HIS B 88 1 28 SHEET 1 AA1 3 ARG A 9 LYS A 20 0 SHEET 2 AA1 3 VAL A 31 GLN A 41 -1 O GLN A 41 N ARG A 9 SHEET 3 AA1 3 SER A 54 LEU A 60 -1 O VAL A 56 N MSE A 38 SHEET 1 AA2 3 ARG B 9 THR B 21 0 SHEET 2 AA2 3 ALA B 30 GLN B 41 -1 O GLN B 41 N ARG B 9 SHEET 3 AA2 3 SER B 54 LEU B 60 -1 O VAL B 58 N LEU B 36 LINK C ARG A 28 N MSE A 29 1555 1555 1.33 LINK C MSE A 29 N ALA A 30 1555 1555 1.33 LINK C GLN A 37 N MSE A 38 1555 1555 1.33 LINK C MSE A 38 N LYS A 39 1555 1555 1.33 LINK C THR A 67 N MSE A 68 1555 1555 1.33 LINK C MSE A 68 N LEU A 69 1555 1555 1.34 LINK C MSE B 1 N ALA B 2 1555 1555 1.33 LINK C ARG B 28 N MSE B 29 1555 1555 1.33 LINK C MSE B 29 N ALA B 30 1555 1555 1.33 LINK C GLN B 37 N MSE B 38 1555 1555 1.32 LINK C MSE B 38 N LYS B 39 1555 1555 1.33 LINK C THR B 67 N MSE B 68 1555 1555 1.34 LINK C MSE B 68 N LEU B 69 1555 1555 1.33 CRYST1 79.404 79.404 58.572 90.00 90.00 90.00 I 4 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012594 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012594 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017073 0.00000