HEADER HYDROLASE/INHIBITOR 13-DEC-17 6BVH TITLE TRYPSIN COMPLEXED WITH A MODIFIED SUNFLOWER TRYPSIN INHIBITOR, SFTI- TITLE 2 TCTR(N12,N14) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CATIONIC TRYPSIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BETA-TRYPSIN; COMPND 5 EC: 3.4.21.4; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: TRYPSIN INHIBITOR 1; COMPND 8 CHAIN: I; COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES; COMPND 11 OTHER_DETAILS: CYCLIC PEPTIDE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: BOVINE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 ORGANISM_SCIENTIFIC: HELIANTHUS ANNUUS; SOURCE 8 ORGANISM_TAXID: 4232 KEYWDS PROTEASE INHIBITOR COMPLEX, SUNFLOWER TRYPSIN INHIBITOR, SFTI, KEYWDS 2 HYDROLASE, HYDROLASE-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR B.T.RILEY,X.CHEN REVDAT 2 30-JAN-19 6BVH 1 JRNL REVDAT 1 19-DEC-18 6BVH 0 JRNL AUTH X.CHEN,B.T.RILEY,S.J.DE VEER,D.E.HOKE,J.VAN HAEFTEN,D.LEAHY, JRNL AUTH 2 J.E.SWEDBERG,M.BRATTSAND,P.J.HARTFIELD,A.M.BUCKLE,J.M.HARRIS JRNL TITL POTENT, MULTI-TARGET SERINE PROTEASE INHIBITION ACHIEVED BY JRNL TITL 2 A SIMPLIFIED BETA-SHEET MOTIF. JRNL REF PLOS ONE V. 14 10842 2019 JRNL REFN ESSN 1932-6203 JRNL PMID 30668585 JRNL DOI 10.1371/JOURNAL.PONE.0210842 REMARK 2 REMARK 2 RESOLUTION. 1.93 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13RC1 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.93 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.66 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.010 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 20647 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.133 REMARK 3 R VALUE (WORKING SET) : 0.132 REMARK 3 FREE R VALUE : 0.158 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.410 REMARK 3 FREE R VALUE TEST SET COUNT : 1112 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.6656 - 4.7486 1.00 2478 161 0.1808 0.1894 REMARK 3 2 4.7486 - 3.7706 1.00 2494 139 0.1140 0.1277 REMARK 3 3 3.7706 - 3.2944 1.00 2446 152 0.1205 0.1381 REMARK 3 4 3.2944 - 2.9934 0.99 2512 136 0.1278 0.1622 REMARK 3 5 2.9934 - 2.7789 0.99 2482 123 0.1415 0.1734 REMARK 3 6 2.7789 - 2.6151 0.99 2437 155 0.1468 0.1612 REMARK 3 7 2.6151 - 2.4842 0.98 2432 164 0.1334 0.1667 REMARK 3 8 2.4842 - 2.3761 0.98 2440 147 0.1286 0.1756 REMARK 3 9 2.3761 - 2.2846 0.98 2435 130 0.1264 0.1487 REMARK 3 10 2.2846 - 2.2058 0.97 2463 124 0.1289 0.1861 REMARK 3 11 2.2058 - 2.1368 0.97 2421 136 0.1223 0.1484 REMARK 3 12 2.1368 - 2.0758 0.97 2407 146 0.1197 0.1507 REMARK 3 13 2.0758 - 2.0211 0.96 2411 150 0.1190 0.1783 REMARK 3 14 2.0211 - 1.9718 0.96 2388 112 0.1232 0.1454 REMARK 3 15 1.9718 - 1.9270 0.95 2412 120 0.1323 0.1490 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 14.400 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.74 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 16:114) REMARK 3 ORIGIN FOR THE GROUP (A): 26.3122 28.3938 13.9953 REMARK 3 T TENSOR REMARK 3 T11: 0.0511 T22: 0.0634 REMARK 3 T33: 0.0525 T12: 0.0028 REMARK 3 T13: -0.0032 T23: -0.0026 REMARK 3 L TENSOR REMARK 3 L11: 1.3534 L22: 1.9188 REMARK 3 L33: 1.4546 L12: -0.0536 REMARK 3 L13: 0.4247 L23: -0.2165 REMARK 3 S TENSOR REMARK 3 S11: -0.0162 S12: -0.0460 S13: -0.0575 REMARK 3 S21: 0.1088 S22: 0.0386 S23: -0.1049 REMARK 3 S31: -0.0141 S32: 0.0156 S33: -0.0182 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 115:135) REMARK 3 ORIGIN FOR THE GROUP (A): 28.3226 27.3653 -1.2869 REMARK 3 T TENSOR REMARK 3 T11: 0.0940 T22: 0.1180 REMARK 3 T33: 0.0615 T12: -0.0050 REMARK 3 T13: 0.0267 T23: -0.0345 REMARK 3 L TENSOR REMARK 3 L11: 3.5928 L22: 3.1196 REMARK 3 L33: 4.1559 L12: -1.4149 REMARK 3 L13: 1.9870 L23: -1.5156 REMARK 3 S TENSOR REMARK 3 S11: 0.0764 S12: 0.2009 S13: -0.0883 REMARK 3 S21: -0.2847 S22: 0.0202 S23: -0.1152 REMARK 3 S31: 0.1244 S32: 0.1043 S33: -0.0839 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 136:158) REMARK 3 ORIGIN FOR THE GROUP (A): 12.4321 24.1731 9.6020 REMARK 3 T TENSOR REMARK 3 T11: 0.0674 T22: 0.1196 REMARK 3 T33: 0.1142 T12: -0.0196 REMARK 3 T13: -0.0140 T23: 0.0215 REMARK 3 L TENSOR REMARK 3 L11: 2.3709 L22: 3.0663 REMARK 3 L33: 2.9470 L12: 0.0303 REMARK 3 L13: 0.1773 L23: -0.3432 REMARK 3 S TENSOR REMARK 3 S11: -0.0391 S12: -0.2226 S13: -0.1066 REMARK 3 S21: 0.1386 S22: 0.0249 S23: 0.3443 REMARK 3 S31: 0.0170 S32: -0.4188 S33: 0.0123 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 159:164) REMARK 3 ORIGIN FOR THE GROUP (A): 15.2929 32.7588 -5.4164 REMARK 3 T TENSOR REMARK 3 T11: 0.0902 T22: 0.1028 REMARK 3 T33: 0.0557 T12: 0.0022 REMARK 3 T13: -0.0226 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 4.0323 L22: 7.7053 REMARK 3 L33: 5.9666 L12: 4.0016 REMARK 3 L13: -0.2319 L23: -4.0483 REMARK 3 S TENSOR REMARK 3 S11: -0.0507 S12: 0.0601 S13: -0.1282 REMARK 3 S21: -0.5181 S22: 0.0393 S23: -0.0654 REMARK 3 S31: 0.0398 S32: -0.0251 S33: 0.0011 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 165:170) REMARK 3 ORIGIN FOR THE GROUP (A): 12.6524 44.7149 -5.1464 REMARK 3 T TENSOR REMARK 3 T11: 0.2406 T22: 0.0867 REMARK 3 T33: 0.1968 T12: -0.0016 REMARK 3 T13: -0.1265 T23: 0.0212 REMARK 3 L TENSOR REMARK 3 L11: 9.5449 L22: 8.2554 REMARK 3 L33: 7.9204 L12: -4.7016 REMARK 3 L13: -2.8133 L23: 2.6021 REMARK 3 S TENSOR REMARK 3 S11: 0.0058 S12: 0.2084 S13: 0.3576 REMARK 3 S21: -0.3054 S22: -0.1779 S23: -0.1924 REMARK 3 S31: -0.5455 S32: 0.1408 S33: 0.1613 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 171:220) REMARK 3 ORIGIN FOR THE GROUP (A): 15.9938 35.8420 2.6521 REMARK 3 T TENSOR REMARK 3 T11: 0.1158 T22: 0.0887 REMARK 3 T33: 0.0571 T12: 0.0225 REMARK 3 T13: -0.0194 T23: -0.0163 REMARK 3 L TENSOR REMARK 3 L11: 1.8901 L22: 2.0580 REMARK 3 L33: 1.1552 L12: -0.1714 REMARK 3 L13: 0.6565 L23: -0.6818 REMARK 3 S TENSOR REMARK 3 S11: -0.0944 S12: 0.0158 S13: 0.0936 REMARK 3 S21: -0.0639 S22: 0.0164 S23: 0.0752 REMARK 3 S31: -0.2542 S32: -0.1721 S33: 0.0518 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 221:224) REMARK 3 ORIGIN FOR THE GROUP (A): 3.4065 36.6087 1.9663 REMARK 3 T TENSOR REMARK 3 T11: 0.1321 T22: 0.2963 REMARK 3 T33: 0.1980 T12: 0.1244 REMARK 3 T13: -0.0504 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 3.3583 L22: 4.3315 REMARK 3 L33: 4.8812 L12: 0.2891 REMARK 3 L13: -1.0763 L23: -3.5598 REMARK 3 S TENSOR REMARK 3 S11: -0.0561 S12: -0.0066 S13: 0.4515 REMARK 3 S21: -0.1724 S22: 0.1325 S23: 0.7591 REMARK 3 S31: -0.1276 S32: -0.4024 S33: -0.0876 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 225:245) REMARK 3 ORIGIN FOR THE GROUP (A): 31.0611 38.9787 4.7431 REMARK 3 T TENSOR REMARK 3 T11: 0.1367 T22: 0.0570 REMARK 3 T33: 0.1207 T12: -0.0269 REMARK 3 T13: 0.0247 T23: -0.0161 REMARK 3 L TENSOR REMARK 3 L11: 5.5854 L22: 1.5480 REMARK 3 L33: 1.9402 L12: 0.6067 REMARK 3 L13: 1.6515 L23: 0.2095 REMARK 3 S TENSOR REMARK 3 S11: -0.1965 S12: 0.2427 S13: 0.2299 REMARK 3 S21: -0.1897 S22: 0.1747 S23: -0.2197 REMARK 3 S31: -0.2525 S32: 0.2064 S33: 0.0307 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN I AND RESID 1:6) REMARK 3 ORIGIN FOR THE GROUP (A): 12.0374 38.3485 12.0966 REMARK 3 T TENSOR REMARK 3 T11: 0.1479 T22: 0.1639 REMARK 3 T33: 0.1242 T12: 0.0840 REMARK 3 T13: -0.0197 T23: 0.0040 REMARK 3 L TENSOR REMARK 3 L11: 3.9316 L22: 3.3271 REMARK 3 L33: 4.4341 L12: 2.5214 REMARK 3 L13: 0.0772 L23: 0.2587 REMARK 3 S TENSOR REMARK 3 S11: -0.0376 S12: -0.1278 S13: 0.3398 REMARK 3 S21: -0.0447 S22: 0.0893 S23: 0.6182 REMARK 3 S31: -0.4890 S32: -0.4614 S33: -0.0601 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN I AND RESID 7:14) REMARK 3 ORIGIN FOR THE GROUP (A): 11.0163 41.0701 16.0415 REMARK 3 T TENSOR REMARK 3 T11: 0.2437 T22: 0.2695 REMARK 3 T33: 0.1848 T12: 0.1268 REMARK 3 T13: -0.0427 T23: -0.0430 REMARK 3 L TENSOR REMARK 3 L11: 6.5129 L22: 4.4040 REMARK 3 L33: 3.7344 L12: 0.0072 REMARK 3 L13: 0.3339 L23: -0.8087 REMARK 3 S TENSOR REMARK 3 S11: -0.1318 S12: 0.1580 S13: 0.7600 REMARK 3 S21: -0.2464 S22: -0.0404 S23: 0.3452 REMARK 3 S31: -0.5148 S32: -0.5126 S33: 0.1516 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6BVH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JAN-18. REMARK 100 THE DEPOSITION ID IS D_1000231679. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-AUG-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : ELLIOTT GX-13 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM 7.2.0 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.12 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20647 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.927 REMARK 200 RESOLUTION RANGE LOW (A) : 63.240 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.03500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.93 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.06300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM MES, 50 MM BENZAMIDINE, 1MM REMARK 280 CACL2, PH 6.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.84000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 34.66000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.62000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 34.66000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.84000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.62000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -55.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N GLY I 1 C ASN I 14 1.33 REMARK 500 O HOH A 575 O HOH A 724 2.03 REMARK 500 O HOH A 573 O HOH A 613 2.06 REMARK 500 O HOH A 601 O HOH A 662 2.10 REMARK 500 O HOH A 609 O HOH A 671 2.11 REMARK 500 O HOH A 665 O HOH A 696 2.11 REMARK 500 O HOH A 454 O HOH A 689 2.11 REMARK 500 O HOH A 523 O HOH A 712 2.13 REMARK 500 N GLY I 1 O ASN I 14 2.14 REMARK 500 O HOH A 563 O HOH A 589 2.17 REMARK 500 O HOH A 619 O HOH A 630 2.18 REMARK 500 O HOH A 631 O HOH A 647 2.19 REMARK 500 O HOH A 680 O HOH A 730 2.19 REMARK 500 O HOH A 689 O HOH A 735 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 71 -77.52 -120.23 REMARK 500 SER A 214 -71.13 -126.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 740 DISTANCE = 6.24 ANGSTROMS REMARK 525 HOH I 219 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH I 220 DISTANCE = 6.40 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 70 OE1 REMARK 620 2 ASN A 72 O 92.4 REMARK 620 3 VAL A 75 O 162.7 81.6 REMARK 620 4 GLU A 80 OE2 105.0 154.9 86.2 REMARK 620 5 HOH A 408 O 88.1 84.4 107.3 78.5 REMARK 620 6 HOH A 505 O 79.6 104.5 86.1 96.4 165.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL I 101 DBREF 6BVH A 16 245 UNP P00760 TRY1_BOVIN 24 246 DBREF 6BVH I 1 14 PDB 6BVH 6BVH 1 14 SEQRES 1 A 223 ILE VAL GLY GLY TYR THR CYS GLY ALA ASN THR VAL PRO SEQRES 2 A 223 TYR GLN VAL SER LEU ASN SER GLY TYR HIS PHE CYS GLY SEQRES 3 A 223 GLY SER LEU ILE ASN SER GLN TRP VAL VAL SER ALA ALA SEQRES 4 A 223 HIS CYS TYR LYS SER GLY ILE GLN VAL ARG LEU GLY GLU SEQRES 5 A 223 ASP ASN ILE ASN VAL VAL GLU GLY ASN GLU GLN PHE ILE SEQRES 6 A 223 SER ALA SER LYS SER ILE VAL HIS PRO SER TYR ASN SER SEQRES 7 A 223 ASN THR LEU ASN ASN ASP ILE MET LEU ILE LYS LEU LYS SEQRES 8 A 223 SER ALA ALA SER LEU ASN SER ARG VAL ALA SER ILE SER SEQRES 9 A 223 LEU PRO THR SER CYS ALA SER ALA GLY THR GLN CYS LEU SEQRES 10 A 223 ILE SER GLY TRP GLY ASN THR LYS SER SER GLY THR SER SEQRES 11 A 223 TYR PRO ASP VAL LEU LYS CYS LEU LYS ALA PRO ILE LEU SEQRES 12 A 223 SER ASP SER SER CYS LYS SER ALA TYR PRO GLY GLN ILE SEQRES 13 A 223 THR SER ASN MET PHE CYS ALA GLY TYR LEU GLU GLY GLY SEQRES 14 A 223 LYS ASP SER CYS GLN GLY ASP SER GLY GLY PRO VAL VAL SEQRES 15 A 223 CYS SER GLY LYS LEU GLN GLY ILE VAL SER TRP GLY SER SEQRES 16 A 223 GLY CYS ALA GLN LYS ASN LYS PRO GLY VAL TYR THR LYS SEQRES 17 A 223 VAL CYS ASN TYR VAL SER TRP ILE LYS GLN THR ILE ALA SEQRES 18 A 223 SER ASN SEQRES 1 I 14 GLY THR CYS THR ARG SER ILE PRO PRO ILE CYS ASN PRO SEQRES 2 I 14 ASN HET CA A 301 1 HET GOL A 302 6 HET GOL A 303 6 HET GOL A 304 6 HET SO4 A 305 5 HET SO4 A 306 5 HET SO4 A 307 5 HET GOL I 101 6 HETNAM CA CALCIUM ION HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 CA CA 2+ FORMUL 4 GOL 4(C3 H8 O3) FORMUL 7 SO4 3(O4 S 2-) FORMUL 11 HOH *360(H2 O) HELIX 1 AA1 ALA A 55 TYR A 59 5 5 HELIX 2 AA2 SER A 164 TYR A 172 1 9 HELIX 3 AA3 TYR A 234 SER A 244 1 11 SHEET 1 AA1 7 TYR A 20 THR A 21 0 SHEET 2 AA1 7 LYS A 156 PRO A 161 -1 O CYS A 157 N TYR A 20 SHEET 3 AA1 7 GLN A 135 GLY A 140 -1 N ILE A 138 O LEU A 158 SHEET 4 AA1 7 PRO A 198 CYS A 201 -1 O VAL A 200 N LEU A 137 SHEET 5 AA1 7 LYS A 204 SER A 217 -1 O LYS A 204 N CYS A 201 SHEET 6 AA1 7 GLY A 226 LYS A 230 -1 O VAL A 227 N TRP A 215 SHEET 7 AA1 7 MET A 180 ALA A 183 -1 N PHE A 181 O TYR A 228 SHEET 1 AA2 6 TYR A 20 THR A 21 0 SHEET 2 AA2 6 LYS A 156 PRO A 161 -1 O CYS A 157 N TYR A 20 SHEET 3 AA2 6 GLN A 135 GLY A 140 -1 N ILE A 138 O LEU A 158 SHEET 4 AA2 6 PRO A 198 CYS A 201 -1 O VAL A 200 N LEU A 137 SHEET 5 AA2 6 LYS A 204 SER A 217 -1 O LYS A 204 N CYS A 201 SHEET 6 AA2 6 THR I 2 THR I 4 -1 O CYS I 3 N GLY A 216 SHEET 1 AA3 7 GLN A 30 ASN A 34 0 SHEET 2 AA3 7 HIS A 40 ASN A 48 -1 O CYS A 42 N LEU A 33 SHEET 3 AA3 7 TRP A 51 SER A 54 -1 O VAL A 53 N SER A 45 SHEET 4 AA3 7 MET A 104 LEU A 108 -1 O ILE A 106 N VAL A 52 SHEET 5 AA3 7 GLN A 81 VAL A 90 -1 N ILE A 89 O LEU A 105 SHEET 6 AA3 7 GLN A 64 LEU A 67 -1 N LEU A 67 O GLN A 81 SHEET 7 AA3 7 GLN A 30 ASN A 34 -1 N SER A 32 O ARG A 66 SSBOND 1 CYS A 22 CYS A 157 1555 1555 2.06 SSBOND 2 CYS A 42 CYS A 58 1555 1555 2.04 SSBOND 3 CYS A 128 CYS A 232 1555 1555 2.04 SSBOND 4 CYS A 136 CYS A 201 1555 1555 2.03 SSBOND 5 CYS A 168 CYS A 182 1555 1555 2.04 SSBOND 6 CYS A 191 CYS A 220 1555 1555 2.05 SSBOND 7 CYS I 3 CYS I 11 1555 1555 2.04 LINK OE1 GLU A 70 CA CA A 301 1555 1555 2.31 LINK O ASN A 72 CA CA A 301 1555 1555 2.35 LINK O VAL A 75 CA CA A 301 1555 1555 2.35 LINK OE2 GLU A 80 CA CA A 301 1555 1555 2.31 LINK CA CA A 301 O HOH A 408 1555 1555 2.40 LINK CA CA A 301 O HOH A 505 1555 1555 2.34 CISPEP 1 ILE I 7 PRO I 8 0 -5.92 SITE 1 AC1 6 GLU A 70 ASN A 72 VAL A 75 GLU A 80 SITE 2 AC1 6 HOH A 408 HOH A 505 SITE 1 AC2 8 CYS A 128 ALA A 129 ILE A 162 PHE A 181 SITE 2 AC2 8 GLN A 210 LYS A 230 HOH A 433 HOH A 557 SITE 1 AC3 11 ASN A 34 TYR A 39 HIS A 40 ARG A 66 SITE 2 AC3 11 ILE A 73 ASN A 74 SER A 164 SER A 166 SITE 3 AC3 11 SER A 167 SO4 A 305 HOH A 478 SITE 1 AC4 7 GLN A 135 CYS A 136 LYS A 159 VAL A 200 SITE 2 AC4 7 CYS A 201 SER A 202 GLY A 203 SITE 1 AC5 8 ARG A 66 SER A 166 SER A 167 SER A 170 SITE 2 AC5 8 GOL A 303 HOH A 403 HOH A 424 HOH A 530 SITE 1 AC6 8 ALA A 129 SER A 130 THR A 134 SER A 202 SITE 2 AC6 8 HOH A 405 HOH A 415 HOH A 432 HOH A 600 SITE 1 AC7 7 LYS A 169 PRO A 173 GLY A 174 GLN A 240 SITE 2 AC7 7 HOH A 466 HOH A 560 HOH A 562 SITE 1 AC8 10 HIS A 57 TYR A 59 LYS A 60 SER I 6 SITE 2 AC8 10 PRO I 8 ILE I 10 HOH I 201 HOH I 205 SITE 3 AC8 10 HOH I 208 HOH I 209 CRYST1 61.680 63.240 69.320 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016213 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015813 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014426 0.00000