HEADER SIGNALING PROTEIN 13-DEC-17 6BVJ TITLE RAS:SOS:RAS IN COMPLEX WITH A SMALL MOLECULE ACTIVATOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTPASE HRAS; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: H-RAS-1,HA-RAS,TRANSFORMING PROTEIN P21,C-H-RAS,P21RAS; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: SON OF SEVENLESS HOMOLOG 1; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: SOS-1; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: GTPASE HRAS; COMPND 13 CHAIN: C; COMPND 14 SYNONYM: H-RAS-1,HA-RAS,TRANSFORMING PROTEIN P21,C-H-RAS,P21RAS; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HRAS, HRAS1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: SOS1; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_COMMON: HUMAN; SOURCE 18 ORGANISM_TAXID: 9606; SOURCE 19 GENE: HRAS, HRAS1; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RAS, SOS, INHIBITOR, ONCOPROTEIN, PROTEIN-PROTEIN COMPLEX, MAPK, KEYWDS 2 SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.PHAN,J.ABBOTT,S.W.FESIK REVDAT 4 15-NOV-23 6BVJ 1 REMARK REVDAT 3 04-OCT-23 6BVJ 1 LINK REVDAT 2 01-MAY-19 6BVJ 1 JRNL REVDAT 1 24-OCT-18 6BVJ 0 JRNL AUTH J.R.ABBOTT,T.R.HODGES,R.N.DANIELS,P.A.PATEL,J.P.KENNEDY, JRNL AUTH 2 J.E.HOWES,D.T.AKAN,M.C.BURNS,J.SAI,T.SOBOLIK,Y.BEESETTY, JRNL AUTH 3 T.LEE,O.W.ROSSANESE,J.PHAN,A.G.WATERSON,S.W.FESIK JRNL TITL DISCOVERY OF AMINOPIPERIDINE INDOLES THAT ACTIVATE THE JRNL TITL 2 GUANINE NUCLEOTIDE EXCHANGE FACTOR SOS1 AND MODULATE RAS JRNL TITL 3 SIGNALING. JRNL REF J. MED. CHEM. V. 61 6002 2018 JRNL REFN ISSN 1520-4804 JRNL PMID 29856609 JRNL DOI 10.1021/ACS.JMEDCHEM.8B00360 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12RC1_2801: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.11 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 153901 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.168 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 7746 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.1163 - 5.4231 1.00 5217 233 0.1707 0.1665 REMARK 3 2 5.4231 - 4.3067 1.00 4983 292 0.1324 0.1284 REMARK 3 3 4.3067 - 3.7630 1.00 4908 295 0.1267 0.1282 REMARK 3 4 3.7630 - 3.4192 1.00 4942 262 0.1363 0.1450 REMARK 3 5 3.4192 - 3.1743 1.00 4936 231 0.1488 0.1656 REMARK 3 6 3.1743 - 2.9872 1.00 4908 248 0.1546 0.1736 REMARK 3 7 2.9872 - 2.8377 1.00 4907 277 0.1543 0.1729 REMARK 3 8 2.8377 - 2.7142 1.00 4871 260 0.1632 0.1697 REMARK 3 9 2.7142 - 2.6098 1.00 4905 244 0.1597 0.1921 REMARK 3 10 2.6098 - 2.5197 1.00 4822 299 0.1536 0.1741 REMARK 3 11 2.5197 - 2.4410 1.00 4859 263 0.1557 0.1685 REMARK 3 12 2.4410 - 2.3712 1.00 4894 248 0.1556 0.1731 REMARK 3 13 2.3712 - 2.3088 1.00 4841 278 0.1557 0.1909 REMARK 3 14 2.3088 - 2.2525 1.00 4833 256 0.1586 0.1783 REMARK 3 15 2.2525 - 2.2013 1.00 4856 275 0.1527 0.1761 REMARK 3 16 2.2013 - 2.1544 1.00 4862 253 0.1507 0.1581 REMARK 3 17 2.1544 - 2.1113 1.00 4823 265 0.1510 0.1611 REMARK 3 18 2.1113 - 2.0715 1.00 4850 251 0.1560 0.1815 REMARK 3 19 2.0715 - 2.0345 1.00 4854 259 0.1628 0.1750 REMARK 3 20 2.0345 - 2.0000 1.00 4877 230 0.1608 0.1873 REMARK 3 21 2.0000 - 1.9678 1.00 4848 237 0.1651 0.1871 REMARK 3 22 1.9678 - 1.9375 1.00 4833 274 0.1765 0.1914 REMARK 3 23 1.9375 - 1.9090 1.00 4796 291 0.1813 0.2095 REMARK 3 24 1.9090 - 1.8821 1.00 4775 287 0.1891 0.1955 REMARK 3 25 1.8821 - 1.8567 1.00 4865 251 0.1929 0.2299 REMARK 3 26 1.8567 - 1.8326 1.00 4875 222 0.1889 0.2094 REMARK 3 27 1.8326 - 1.8097 1.00 4840 235 0.1888 0.2080 REMARK 3 28 1.8097 - 1.7879 1.00 4860 239 0.1989 0.2255 REMARK 3 29 1.7879 - 1.7671 1.00 4826 260 0.2050 0.2305 REMARK 3 30 1.7671 - 1.7472 0.97 4689 231 0.2177 0.2405 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.180 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 7144 REMARK 3 ANGLE : 0.855 9707 REMARK 3 CHIRALITY : 0.054 1050 REMARK 3 PLANARITY : 0.005 1311 REMARK 3 DIHEDRAL : 14.772 4412 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 18 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.5789 50.2768 62.3868 REMARK 3 T TENSOR REMARK 3 T11: 0.1156 T22: 0.1263 REMARK 3 T33: 0.1236 T12: -0.0253 REMARK 3 T13: 0.0161 T23: -0.0127 REMARK 3 L TENSOR REMARK 3 L11: 0.0378 L22: 0.0443 REMARK 3 L33: 0.0619 L12: 0.0422 REMARK 3 L13: 0.0259 L23: 0.0495 REMARK 3 S TENSOR REMARK 3 S11: 0.0345 S12: 0.0072 S13: -0.0073 REMARK 3 S21: -0.0156 S22: 0.0060 S23: 0.0620 REMARK 3 S31: 0.0552 S32: -0.0086 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 37 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.2203 45.1574 56.7994 REMARK 3 T TENSOR REMARK 3 T11: 0.1266 T22: 0.1565 REMARK 3 T33: 0.1139 T12: -0.0423 REMARK 3 T13: 0.0208 T23: -0.0133 REMARK 3 L TENSOR REMARK 3 L11: 0.0261 L22: 0.0060 REMARK 3 L33: 0.0408 L12: -0.0071 REMARK 3 L13: 0.0533 L23: -0.0053 REMARK 3 S TENSOR REMARK 3 S11: -0.0294 S12: -0.1116 S13: -0.0084 REMARK 3 S21: 0.0629 S22: 0.0499 S23: -0.0268 REMARK 3 S31: -0.0432 S32: 0.0653 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 53 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.0720 46.0835 73.3816 REMARK 3 T TENSOR REMARK 3 T11: 0.1973 T22: 0.1638 REMARK 3 T33: 0.1297 T12: -0.0476 REMARK 3 T13: 0.0238 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 0.0203 L22: -0.0006 REMARK 3 L33: 0.0186 L12: 0.0031 REMARK 3 L13: 0.0299 L23: 0.0020 REMARK 3 S TENSOR REMARK 3 S11: 0.0322 S12: -0.0672 S13: -0.0858 REMARK 3 S21: 0.1309 S22: -0.0621 S23: 0.0411 REMARK 3 S31: 0.1551 S32: -0.0311 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 77 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.2212 57.1802 74.6247 REMARK 3 T TENSOR REMARK 3 T11: 0.1310 T22: 0.1492 REMARK 3 T33: 0.1036 T12: -0.0460 REMARK 3 T13: 0.0165 T23: -0.0336 REMARK 3 L TENSOR REMARK 3 L11: 0.0393 L22: 0.0485 REMARK 3 L33: -0.0054 L12: 0.0369 REMARK 3 L13: 0.0164 L23: 0.0120 REMARK 3 S TENSOR REMARK 3 S11: 0.0877 S12: -0.1708 S13: 0.0935 REMARK 3 S21: 0.0592 S22: -0.0240 S23: 0.0125 REMARK 3 S31: -0.0228 S32: 0.0327 S33: -0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 117 THROUGH 151 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.6699 66.1551 65.8078 REMARK 3 T TENSOR REMARK 3 T11: 0.1492 T22: 0.1066 REMARK 3 T33: 0.1713 T12: -0.0281 REMARK 3 T13: 0.0287 T23: -0.0235 REMARK 3 L TENSOR REMARK 3 L11: 0.0341 L22: 0.0636 REMARK 3 L33: 0.0463 L12: 0.0973 REMARK 3 L13: -0.0668 L23: -0.0606 REMARK 3 S TENSOR REMARK 3 S11: 0.0602 S12: 0.0022 S13: 0.1214 REMARK 3 S21: -0.0282 S22: -0.0221 S23: 0.0860 REMARK 3 S31: -0.0934 S32: 0.0676 S33: -0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 152 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.9928 53.8433 60.6336 REMARK 3 T TENSOR REMARK 3 T11: 0.1263 T22: 0.1602 REMARK 3 T33: 0.1108 T12: -0.0483 REMARK 3 T13: 0.0141 T23: -0.0152 REMARK 3 L TENSOR REMARK 3 L11: 0.0106 L22: 0.0039 REMARK 3 L33: 0.0078 L12: -0.0150 REMARK 3 L13: -0.0146 L23: 0.0039 REMARK 3 S TENSOR REMARK 3 S11: 0.0381 S12: 0.0045 S13: 0.0438 REMARK 3 S21: 0.0041 S22: -0.0557 S23: -0.0054 REMARK 3 S31: -0.0877 S32: 0.1319 S33: 0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 565 THROUGH 671 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.0564 28.5524 80.6390 REMARK 3 T TENSOR REMARK 3 T11: 0.1181 T22: 0.1260 REMARK 3 T33: 0.0838 T12: -0.0104 REMARK 3 T13: 0.0037 T23: 0.0088 REMARK 3 L TENSOR REMARK 3 L11: 0.0020 L22: 0.1013 REMARK 3 L33: 0.1140 L12: -0.0858 REMARK 3 L13: -0.0783 L23: 0.0469 REMARK 3 S TENSOR REMARK 3 S11: -0.0188 S12: -0.0138 S13: 0.0054 REMARK 3 S21: 0.0023 S22: 0.0207 S23: 0.0072 REMARK 3 S31: 0.0086 S32: 0.0614 S33: -0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 672 THROUGH 723 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.4675 35.7562 73.2869 REMARK 3 T TENSOR REMARK 3 T11: 0.1001 T22: 0.1395 REMARK 3 T33: 0.1102 T12: -0.0281 REMARK 3 T13: 0.0029 T23: -0.0074 REMARK 3 L TENSOR REMARK 3 L11: 0.0938 L22: 0.2238 REMARK 3 L33: 0.0987 L12: -0.0922 REMARK 3 L13: -0.0501 L23: -0.0224 REMARK 3 S TENSOR REMARK 3 S11: -0.0260 S12: 0.0100 S13: 0.0694 REMARK 3 S21: 0.0177 S22: -0.0147 S23: 0.0521 REMARK 3 S31: -0.0684 S32: -0.0782 S33: 0.0000 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 724 THROUGH 768 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.5066 49.4871 52.5725 REMARK 3 T TENSOR REMARK 3 T11: 0.1528 T22: 0.1481 REMARK 3 T33: 0.1544 T12: -0.0221 REMARK 3 T13: 0.0101 T23: 0.0171 REMARK 3 L TENSOR REMARK 3 L11: 0.0492 L22: 0.0983 REMARK 3 L33: 0.0454 L12: -0.0037 REMARK 3 L13: 0.0298 L23: 0.0490 REMARK 3 S TENSOR REMARK 3 S11: 0.0948 S12: 0.0213 S13: 0.0582 REMARK 3 S21: 0.0467 S22: 0.0503 S23: 0.0932 REMARK 3 S31: -0.2307 S32: -0.1039 S33: -0.0000 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 769 THROUGH 1046 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.5346 33.7431 32.7947 REMARK 3 T TENSOR REMARK 3 T11: 0.0579 T22: 0.0649 REMARK 3 T33: 0.0609 T12: -0.0246 REMARK 3 T13: 0.0102 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 0.1339 L22: 0.2293 REMARK 3 L33: 0.4891 L12: -0.0015 REMARK 3 L13: -0.0545 L23: -0.0857 REMARK 3 S TENSOR REMARK 3 S11: -0.0346 S12: 0.0269 S13: -0.0044 REMARK 3 S21: -0.0248 S22: 0.0297 S23: -0.0149 REMARK 3 S31: 0.0116 S32: 0.0246 S33: -0.0139 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 0 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.7342 12.2737 41.6497 REMARK 3 T TENSOR REMARK 3 T11: 0.1035 T22: 0.1042 REMARK 3 T33: 0.1754 T12: 0.0171 REMARK 3 T13: 0.0024 T23: 0.0013 REMARK 3 L TENSOR REMARK 3 L11: 0.0006 L22: 0.0646 REMARK 3 L33: 0.0062 L12: -0.0104 REMARK 3 L13: 0.0167 L23: -0.0318 REMARK 3 S TENSOR REMARK 3 S11: -0.0608 S12: 0.0289 S13: 0.1364 REMARK 3 S21: 0.0799 S22: 0.0306 S23: -0.1136 REMARK 3 S31: 0.0501 S32: -0.0196 S33: -0.0000 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 25 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.2081 12.6353 55.8653 REMARK 3 T TENSOR REMARK 3 T11: 0.2619 T22: 0.1566 REMARK 3 T33: 0.3443 T12: 0.0038 REMARK 3 T13: -0.0916 T23: 0.0620 REMARK 3 L TENSOR REMARK 3 L11: -0.0047 L22: 0.0015 REMARK 3 L33: 0.0002 L12: -0.0038 REMARK 3 L13: -0.0002 L23: -0.0069 REMARK 3 S TENSOR REMARK 3 S11: 0.0358 S12: 0.0551 S13: -0.0809 REMARK 3 S21: 0.0597 S22: 0.0571 S23: 0.0081 REMARK 3 S31: 0.0862 S32: 0.0020 S33: -0.0000 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 35 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.9536 14.2819 46.0802 REMARK 3 T TENSOR REMARK 3 T11: 0.2066 T22: 0.2311 REMARK 3 T33: 0.3603 T12: 0.0589 REMARK 3 T13: -0.1029 T23: -0.0079 REMARK 3 L TENSOR REMARK 3 L11: -0.0018 L22: 0.0010 REMARK 3 L33: 0.0018 L12: 0.0048 REMARK 3 L13: -0.0172 L23: 0.0019 REMARK 3 S TENSOR REMARK 3 S11: -0.0223 S12: -0.0690 S13: 0.0270 REMARK 3 S21: 0.0332 S22: -0.1231 S23: -0.0579 REMARK 3 S31: -0.0734 S32: 0.1145 S33: 0.0000 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 49 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.4493 19.2459 36.0298 REMARK 3 T TENSOR REMARK 3 T11: 0.0855 T22: 0.0739 REMARK 3 T33: 0.1451 T12: -0.0001 REMARK 3 T13: 0.0115 T23: 0.0108 REMARK 3 L TENSOR REMARK 3 L11: 0.0138 L22: 0.0801 REMARK 3 L33: 0.0256 L12: 0.0434 REMARK 3 L13: 0.0643 L23: 0.0456 REMARK 3 S TENSOR REMARK 3 S11: -0.0420 S12: -0.0239 S13: -0.0434 REMARK 3 S21: -0.0206 S22: -0.0064 S23: -0.1444 REMARK 3 S31: -0.0353 S32: -0.0204 S33: -0.0009 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 75 THROUGH 117 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.4400 8.8912 31.5870 REMARK 3 T TENSOR REMARK 3 T11: 0.1122 T22: 0.0868 REMARK 3 T33: 0.1112 T12: 0.0210 REMARK 3 T13: 0.0173 T23: 0.0050 REMARK 3 L TENSOR REMARK 3 L11: -0.0121 L22: 0.1361 REMARK 3 L33: 0.0273 L12: -0.0219 REMARK 3 L13: -0.0529 L23: 0.0006 REMARK 3 S TENSOR REMARK 3 S11: 0.0650 S12: 0.0241 S13: -0.0031 REMARK 3 S21: -0.1019 S22: -0.0347 S23: 0.0222 REMARK 3 S31: 0.0190 S32: 0.0191 S33: -0.0000 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 118 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.0783 -1.8512 36.4948 REMARK 3 T TENSOR REMARK 3 T11: 0.1460 T22: 0.1107 REMARK 3 T33: 0.1748 T12: 0.0152 REMARK 3 T13: 0.0094 T23: -0.0289 REMARK 3 L TENSOR REMARK 3 L11: 0.0134 L22: 0.0175 REMARK 3 L33: 0.0203 L12: -0.0061 REMARK 3 L13: 0.0180 L23: -0.0132 REMARK 3 S TENSOR REMARK 3 S11: 0.0723 S12: -0.0350 S13: 0.0162 REMARK 3 S21: -0.0924 S22: -0.0306 S23: 0.1929 REMARK 3 S31: 0.0730 S32: 0.0524 S33: 0.0000 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 138 THROUGH 151 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.3638 1.0814 43.3223 REMARK 3 T TENSOR REMARK 3 T11: 0.1270 T22: 0.1110 REMARK 3 T33: 0.1289 T12: 0.0247 REMARK 3 T13: 0.0005 T23: -0.0058 REMARK 3 L TENSOR REMARK 3 L11: 0.0097 L22: 0.0216 REMARK 3 L33: 0.0021 L12: -0.0081 REMARK 3 L13: 0.0111 L23: -0.0034 REMARK 3 S TENSOR REMARK 3 S11: 0.0114 S12: -0.0341 S13: 0.0167 REMARK 3 S21: 0.0160 S22: -0.0094 S23: -0.0543 REMARK 3 S31: -0.0427 S32: 0.0083 S33: 0.0000 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 152 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.0051 3.3624 37.0444 REMARK 3 T TENSOR REMARK 3 T11: 0.1191 T22: 0.1042 REMARK 3 T33: 0.1914 T12: 0.0369 REMARK 3 T13: 0.0248 T23: -0.0054 REMARK 3 L TENSOR REMARK 3 L11: 0.0152 L22: 0.0160 REMARK 3 L33: 0.0033 L12: -0.0101 REMARK 3 L13: 0.0002 L23: 0.0012 REMARK 3 S TENSOR REMARK 3 S11: 0.0569 S12: -0.0034 S13: 0.0268 REMARK 3 S21: -0.0533 S22: -0.0659 S23: -0.1801 REMARK 3 S31: 0.1307 S32: 0.0238 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6BVJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1000231305. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 153914 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.747 REMARK 200 RESOLUTION RANGE LOW (A) : 36.110 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 11.50 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4NYI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE, 2.0 M SODIUM REMARK 280 FORMATE, PH 4.0, VAPOR DIFFUSION, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 92.16450 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 92.16450 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 89.54150 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 92.16450 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 92.16450 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 89.54150 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 92.16450 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 92.16450 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 89.54150 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 92.16450 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 92.16450 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 89.54150 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 92.16450 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 92.16450 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 89.54150 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 92.16450 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 92.16450 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 89.54150 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 92.16450 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 92.16450 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 89.54150 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 92.16450 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 92.16450 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 89.54150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 ASN B 591 REMARK 465 MET B 592 REMARK 465 GLN B 593 REMARK 465 PRO B 594 REMARK 465 LYS B 595 REMARK 465 ALA B 596 REMARK 465 ARG B 744 REMARK 465 ASP B 745 REMARK 465 ASN B 746 REMARK 465 GLY B 747 REMARK 465 PRO B 748 REMARK 465 GLY B 749 REMARK 465 HIS B 750 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 64 CG CD1 CD2 CE1 CE2 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 427 O HOH A 478 1.80 REMARK 500 O HOH B 2413 O HOH B 2633 1.84 REMARK 500 O HOH B 2724 O HOH B 2746 1.85 REMARK 500 O HOH B 2645 O HOH B 2842 1.85 REMARK 500 O HOH B 2570 O HOH B 2845 1.89 REMARK 500 O HOH B 2802 O HOH B 2814 1.90 REMARK 500 O HOH B 2153 O HOH B 2210 1.91 REMARK 500 O HOH A 408 O HOH A 448 1.91 REMARK 500 O HOH A 468 O HOH A 501 1.93 REMARK 500 O HOH B 2254 O HOH B 2257 1.93 REMARK 500 O HOH C 385 O HOH C 387 1.94 REMARK 500 O HOH B 2274 O HOH C 491 1.94 REMARK 500 O HOH A 435 O HOH A 445 1.97 REMARK 500 O ASP C 38 O HOH C 301 2.01 REMARK 500 NH2 ARG C 128 O HOH C 302 2.02 REMARK 500 O HOH B 2130 O HOH B 2365 2.03 REMARK 500 O HOH B 2520 O HOH B 2833 2.03 REMARK 500 O HOH B 2600 O HOH B 2693 2.03 REMARK 500 OE1 GLN A 129 O HOH A 301 2.04 REMARK 500 O HOH B 2716 O HOH B 2731 2.04 REMARK 500 O HOH B 2123 O HOH B 2623 2.04 REMARK 500 O HOH B 2216 O HOH B 2673 2.04 REMARK 500 O HOH B 2700 O HOH B 2750 2.05 REMARK 500 O HOH B 2199 O HOH B 2630 2.06 REMARK 500 NH1 ARG A 73 O HOH A 302 2.09 REMARK 500 O HOH B 2615 O HOH C 492 2.10 REMARK 500 O HOH B 2151 O HOH B 2650 2.10 REMARK 500 NH2 ARG B 982 O HOH B 2101 2.10 REMARK 500 O HOH C 311 O HOH C 452 2.10 REMARK 500 NE2 GLN C 70 O HOH C 303 2.11 REMARK 500 O HOH B 2837 O HOH B 2876 2.11 REMARK 500 O HOH B 2558 O HOH B 2841 2.12 REMARK 500 O HOH A 386 O HOH B 2641 2.13 REMARK 500 O HOH B 2519 O HOH B 2546 2.13 REMARK 500 O HOH B 2153 O HOH B 2829 2.13 REMARK 500 O HOH B 2692 O HOH B 2824 2.14 REMARK 500 O HOH B 2493 O HOH B 2778 2.14 REMARK 500 O HOH A 493 O HOH B 2669 2.15 REMARK 500 O HOH C 409 O HOH C 422 2.15 REMARK 500 O HOH B 2330 O HOH B 2702 2.15 REMARK 500 O HOH A 388 O HOH B 2656 2.15 REMARK 500 O HOH B 2665 O HOH C 492 2.15 REMARK 500 O HOH A 314 O HOH A 449 2.15 REMARK 500 O HOH B 2152 O HOH B 2392 2.15 REMARK 500 O2 GOL B 2008 O HOH B 2102 2.17 REMARK 500 O HOH A 445 O HOH A 502 2.17 REMARK 500 O HOH B 2441 O HOH B 2736 2.17 REMARK 500 O HOH A 404 O HOH A 436 2.17 REMARK 500 O HOH B 2805 O HOH B 2854 2.17 REMARK 500 O HOH C 313 O HOH C 489 2.17 REMARK 500 REMARK 500 THIS ENTRY HAS 59 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 2109 O HOH B 2194 3555 2.07 REMARK 500 O HOH B 2177 O HOH B 2693 7556 2.09 REMARK 500 O HOH B 2756 O HOH C 507 3555 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 36 -64.29 -99.84 REMARK 500 ARG A 149 -3.83 82.27 REMARK 500 HIS B 764 -118.50 -125.57 REMARK 500 HIS B 770 61.77 -103.27 REMARK 500 ASN B 995 70.98 -150.07 REMARK 500 GLN C 25 150.80 -49.84 REMARK 500 ASN C 26 98.47 -43.43 REMARK 500 GLU C 37 114.17 -30.27 REMARK 500 TYR C 40 17.00 -140.81 REMARK 500 TYR C 40 17.00 -141.21 REMARK 500 ASP C 119 -169.77 -160.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLN C 25 ASN C 26 142.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 17 OG REMARK 620 2 THR A 35 OG1 84.3 REMARK 620 3 GNP A 201 O1G 174.1 90.2 REMARK 620 4 GNP A 201 O1B 92.3 174.8 93.3 REMARK 620 5 HOH A 313 O 86.0 90.0 91.8 93.7 REMARK 620 6 HOH A 368 O 88.5 87.5 93.5 88.5 174.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C 202 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR C 87 OG1 REMARK 620 2 THR C 124 OG1 99.2 REMARK 620 3 HOH C 477 O 65.9 95.1 REMARK 620 4 HOH C 487 O 117.5 136.4 120.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GNP A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EAS B 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 2004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 2005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 2006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 2007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 2008 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA C 202 DBREF 6BVJ A 1 166 UNP P01112 RASH_HUMAN 1 166 DBREF 6BVJ B 566 1046 UNP Q07889 SOS1_HUMAN 566 1046 DBREF 6BVJ C 1 166 UNP P01112 RASH_HUMAN 1 166 SEQADV 6BVJ GLY A 0 UNP P01112 EXPRESSION TAG SEQADV 6BVJ GLY B 565 UNP Q07889 EXPRESSION TAG SEQADV 6BVJ GLY C 0 UNP P01112 EXPRESSION TAG SEQRES 1 A 167 GLY MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA GLY SEQRES 2 A 167 GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN SEQRES 3 A 167 ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SEQRES 4 A 167 SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CSO SEQRES 5 A 167 LEU LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR SEQRES 6 A 167 SER ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY SEQRES 7 A 167 PHE LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE SEQRES 8 A 167 GLU ASP ILE HIS GLN TYR ARG GLU GLN ILE LYS ARG VAL SEQRES 9 A 167 LYS ASP SER ASP ASP VAL PRO MET VAL LEU VAL GLY ASN SEQRES 10 A 167 LYS CYS ASP LEU ALA ALA ARG THR VAL GLU SER ARG GLN SEQRES 11 A 167 ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO TYR ILE SEQRES 12 A 167 GLU THR SER ALA LYS THR ARG GLN GLY VAL GLU ASP ALA SEQRES 13 A 167 PHE TYR THR LEU VAL ARG GLU ILE ARG GLN HIS SEQRES 1 B 482 GLY GLN MET ARG LEU PRO SER ALA ASP VAL TYR ARG PHE SEQRES 2 B 482 ALA GLU PRO ASP SER GLU GLU ASN ILE ILE PHE GLU GLU SEQRES 3 B 482 ASN MET GLN PRO LYS ALA GLY ILE PRO ILE ILE LYS ALA SEQRES 4 B 482 GLY THR VAL ILE LYS LEU ILE GLU ARG LEU THR TYR HIS SEQRES 5 B 482 MET TYR ALA ASP PRO ASN PHE VAL ARG THR PHE LEU THR SEQRES 6 B 482 THR TYR ARG SER PHE CYS LYS PRO GLN GLU LEU LEU SER SEQRES 7 B 482 LEU ILE ILE GLU ARG PHE GLU ILE PRO GLU PRO GLU PRO SEQRES 8 B 482 THR GLU ALA ASP ARG ILE ALA ILE GLU ASN GLY ASP GLN SEQRES 9 B 482 PRO LEU SER ALA GLU LEU LYS ARG PHE ARG LYS GLU TYR SEQRES 10 B 482 ILE GLN PRO VAL GLN LEU ARG VAL LEU ASN VAL CYS ARG SEQRES 11 B 482 HIS TRP VAL GLU HIS HIS PHE TYR ASP PHE GLU ARG ASP SEQRES 12 B 482 ALA TYR LEU LEU GLN ARG MET GLU GLU PHE ILE GLY THR SEQRES 13 B 482 VAL ARG GLY LYS ALA MET LYS LYS TRP VAL GLU SER ILE SEQRES 14 B 482 THR LYS ILE ILE GLN ARG LYS LYS ILE ALA ARG ASP ASN SEQRES 15 B 482 GLY PRO GLY HIS ASN ILE THR PHE GLN SER SER PRO PRO SEQRES 16 B 482 THR VAL GLU TRP HIS ILE SER ARG PRO GLY HIS ILE GLU SEQRES 17 B 482 THR PHE ASP LEU LEU THR LEU HIS PRO ILE GLU ILE ALA SEQRES 18 B 482 ARG GLN LEU THR LEU LEU GLU SER ASP LEU TYR ARG ALA SEQRES 19 B 482 VAL GLN PRO SER GLU LEU VAL GLY SER VAL TRP THR LYS SEQRES 20 B 482 GLU ASP LYS GLU ILE ASN SER PRO ASN LEU LEU LYS MET SEQRES 21 B 482 ILE ARG HIS THR THR ASN LEU THR LEU TRP PHE GLU LYS SEQRES 22 B 482 CYS ILE VAL GLU THR GLU ASN LEU GLU GLU ARG VAL ALA SEQRES 23 B 482 VAL VAL SER ARG ILE ILE GLU ILE LEU GLN VAL PHE GLN SEQRES 24 B 482 GLU LEU ASN ASN PHE ASN GLY VAL LEU GLU VAL VAL SER SEQRES 25 B 482 ALA MET ASN SER SER PRO VAL TYR ARG LEU ASP HIS THR SEQRES 26 B 482 PHE GLU GLN ILE PRO SER ARG GLN LYS LYS ILE LEU GLU SEQRES 27 B 482 GLU ALA HIS GLU LEU SER GLU ASP HIS TYR LYS LYS TYR SEQRES 28 B 482 LEU ALA LYS LEU ARG SER ILE ASN PRO PRO CYS VAL PRO SEQRES 29 B 482 PHE PHE GLY ILE TYR LEU THR ASN ILE LEU LYS THR GLU SEQRES 30 B 482 GLU GLY ASN PRO GLU VAL LEU LYS ARG HIS GLY LYS GLU SEQRES 31 B 482 LEU ILE ASN PHE SER LYS ARG ARG LYS VAL ALA GLU ILE SEQRES 32 B 482 THR GLY GLU ILE GLN GLN TYR GLN ASN GLN PRO TYR CYS SEQRES 33 B 482 LEU ARG VAL GLU SER ASP ILE LYS ARG PHE PHE GLU ASN SEQRES 34 B 482 LEU ASN PRO MET GLY ASN SER MET GLU LYS GLU PHE THR SEQRES 35 B 482 ASP TYR LEU PHE ASN LYS SER LEU GLU ILE GLU PRO ARG SEQRES 36 B 482 ASN PRO LYS PRO LEU PRO ARG PHE PRO LYS LYS TYR SER SEQRES 37 B 482 TYR PRO LEU LYS SER PRO GLY VAL ARG PRO SER ASN PRO SEQRES 38 B 482 ARG SEQRES 1 C 167 GLY MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA GLY SEQRES 2 C 167 GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN SEQRES 3 C 167 ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SEQRES 4 C 167 SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CYS SEQRES 5 C 167 LEU LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR SEQRES 6 C 167 SER ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY SEQRES 7 C 167 PHE LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE SEQRES 8 C 167 GLU ASP ILE HIS GLN TYR ARG GLU GLN ILE LYS ARG VAL SEQRES 9 C 167 LYS ASP SER ASP ASP VAL PRO MET VAL LEU VAL GLY ASN SEQRES 10 C 167 LYS CYS ASP LEU ALA ALA ARG THR VAL GLU SER ARG GLN SEQRES 11 C 167 ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO TYR ILE SEQRES 12 C 167 GLU THR SER ALA LYS THR ARG GLN GLY VAL GLU ASP ALA SEQRES 13 C 167 PHE TYR THR LEU VAL ARG GLU ILE ARG GLN HIS MODRES 6BVJ CSO A 51 CYS MODIFIED RESIDUE HET CSO A 51 7 HET GNP A 201 32 HET MG A 202 1 HET EAS B2001 33 HET FMT B2002 3 HET FMT B2003 3 HET FMT B2004 3 HET FMT B2005 3 HET FMT B2006 3 HET GOL B2007 6 HET GOL B2008 6 HET FMT C 201 3 HET NA C 202 1 HETNAM CSO S-HYDROXYCYSTEINE HETNAM GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER HETNAM MG MAGNESIUM ION HETNAM EAS 5-CHLORO-N-{1-[(5-CHLORO-1H-INDOL-3-YL) HETNAM 2 EAS METHYL]PIPERIDIN-4-YL}-L-TRYPTOPHANAMIDE HETNAM FMT FORMIC ACID HETNAM GOL GLYCEROL HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 CSO C3 H7 N O3 S FORMUL 4 GNP C10 H17 N6 O13 P3 FORMUL 5 MG MG 2+ FORMUL 6 EAS C25 H27 CL2 N5 O FORMUL 7 FMT 6(C H2 O2) FORMUL 12 GOL 2(C3 H8 O3) FORMUL 15 NA NA 1+ FORMUL 16 HOH *1228(H2 O) HELIX 1 AA1 GLY A 15 ASN A 26 1 12 HELIX 2 AA2 GLN A 61 SER A 65 5 5 HELIX 3 AA3 ARG A 68 GLY A 75 1 8 HELIX 4 AA4 ASN A 86 ASP A 92 1 7 HELIX 5 AA5 ASP A 92 ASP A 105 1 14 HELIX 6 AA6 GLU A 126 GLY A 138 1 13 HELIX 7 AA7 GLY A 151 GLN A 165 1 15 HELIX 8 AA8 TYR B 575 GLU B 579 5 5 HELIX 9 AA9 THR B 605 THR B 614 1 10 HELIX 10 AB1 ASP B 620 TYR B 631 1 12 HELIX 11 AB2 ARG B 632 PHE B 634 5 3 HELIX 12 AB3 LYS B 636 GLU B 649 1 14 HELIX 13 AB4 THR B 656 ASN B 665 1 10 HELIX 14 AB5 SER B 671 TYR B 681 1 11 HELIX 15 AB6 TYR B 681 HIS B 700 1 20 HELIX 16 AB7 PHE B 701 ASP B 707 1 7 HELIX 17 AB8 ASP B 707 THR B 720 1 14 HELIX 18 AB9 MET B 726 ILE B 742 1 17 HELIX 19 AC1 HIS B 770 PHE B 774 5 5 HELIX 20 AC2 HIS B 780 ALA B 798 1 19 HELIX 21 AC3 GLN B 800 LYS B 811 5 12 HELIX 22 AC4 ASP B 813 SER B 818 1 6 HELIX 23 AC5 SER B 818 GLU B 841 1 24 HELIX 24 AC6 ASN B 844 LEU B 865 1 22 HELIX 25 AC7 ASN B 867 ASN B 879 1 13 HELIX 26 AC8 SER B 880 ARG B 885 1 6 HELIX 27 AC9 LEU B 886 GLN B 892 1 7 HELIX 28 AD1 PRO B 894 LEU B 907 1 14 HELIX 29 AD2 SER B 908 ARG B 920 1 13 HELIX 30 AD3 PHE B 930 GLY B 943 1 14 HELIX 31 AD4 PHE B 958 GLN B 975 1 18 HELIX 32 AD5 GLU B 984 ASN B 993 1 10 HELIX 33 AD6 MET B 1001 GLU B 1017 1 17 HELIX 34 AD7 SER C 17 GLN C 25 1 9 HELIX 35 AD8 TYR C 64 ALA C 66 5 3 HELIX 36 AD9 MET C 67 THR C 74 1 8 HELIX 37 AE1 ASN C 86 ASP C 92 1 7 HELIX 38 AE2 ASP C 92 ASP C 105 1 14 HELIX 39 AE3 GLU C 126 GLY C 138 1 13 HELIX 40 AE4 GLY C 151 GLN C 165 1 15 SHEET 1 AA1 6 GLU A 37 ILE A 46 0 SHEET 2 AA1 6 GLU A 49 THR A 58 -1 O ASP A 57 N ASP A 38 SHEET 3 AA1 6 THR A 2 GLY A 10 1 N TYR A 4 O ASP A 54 SHEET 4 AA1 6 GLY A 77 ALA A 83 1 O VAL A 81 N VAL A 9 SHEET 5 AA1 6 MET A 111 ASN A 116 1 O ASN A 116 N PHE A 82 SHEET 6 AA1 6 TYR A 141 GLU A 143 1 O ILE A 142 N LEU A 113 SHEET 1 AA2 4 ILE B 586 PHE B 588 0 SHEET 2 AA2 4 ILE B 601 GLY B 604 -1 O ALA B 603 N ILE B 587 SHEET 3 AA2 4 LYS B 953 ASN B 957 -1 O ILE B 956 N GLY B 604 SHEET 4 AA2 4 VAL B 947 ARG B 950 -1 N LEU B 948 O LEU B 955 SHEET 1 AA3 6 ARG C 41 ILE C 46 0 SHEET 2 AA3 6 GLU C 49 ASP C 57 -1 O LEU C 53 N LYS C 42 SHEET 3 AA3 6 THR C 2 GLY C 10 1 N LEU C 6 O LEU C 56 SHEET 4 AA3 6 GLY C 77 ALA C 83 1 O VAL C 81 N VAL C 9 SHEET 5 AA3 6 MET C 111 LYS C 117 1 O ASN C 116 N PHE C 82 SHEET 6 AA3 6 TYR C 141 SER C 145 1 O THR C 144 N LYS C 117 LINK C THR A 50 N CSO A 51 1555 1555 1.32 LINK C CSO A 51 N LEU A 52 1555 1555 1.32 LINK OG SER A 17 MG MG A 202 1555 1555 2.08 LINK OG1 THR A 35 MG MG A 202 1555 1555 2.06 LINK O1G GNP A 201 MG MG A 202 1555 1555 2.02 LINK O1B GNP A 201 MG MG A 202 1555 1555 2.10 LINK MG MG A 202 O HOH A 313 1555 1555 2.13 LINK MG MG A 202 O HOH A 368 1555 1555 2.11 LINK OG1BTHR C 87 NA NA C 202 1555 1555 3.15 LINK OG1 THR C 124 NA NA C 202 1555 1555 3.09 LINK NA NA C 202 O HOH C 477 1555 1555 2.68 LINK NA NA C 202 O HOH C 487 1555 1555 2.29 CISPEP 1 PRO B 924 PRO B 925 0 10.91 CISPEP 2 ASN B 1020 PRO B 1021 0 6.18 SITE 1 AC1 32 GLY A 12 GLY A 13 VAL A 14 GLY A 15 SITE 2 AC1 32 LYS A 16 SER A 17 ALA A 18 PHE A 28 SITE 3 AC1 32 VAL A 29 ASP A 30 GLU A 31 TYR A 32 SITE 4 AC1 32 PRO A 34 THR A 35 GLY A 60 GLN A 61 SITE 5 AC1 32 ASN A 116 LYS A 117 ASP A 119 LEU A 120 SITE 6 AC1 32 SER A 145 ALA A 146 LYS A 147 MG A 202 SITE 7 AC1 32 HOH A 313 HOH A 364 HOH A 368 HOH A 375 SITE 8 AC1 32 HOH A 381 HOH A 401 HOH A 409 HOH A 432 SITE 1 AC2 5 SER A 17 THR A 35 GNP A 201 HOH A 313 SITE 2 AC2 5 HOH A 368 SITE 1 AC3 11 MET B 878 ASN B 879 TYR B 884 PHE B 890 SITE 2 AC3 11 LYS B 898 GLU B 902 HIS B 905 HOH B2203 SITE 3 AC3 11 HOH B2303 HOH B2424 HOH B2717 SITE 1 AC4 6 GLN B 566 MET B 567 HIS B 616 MET B 617 SITE 2 AC4 6 HOH B2221 HOH B2289 SITE 1 AC5 3 ARG A 128 ARG B 767 PRO B 768 SITE 1 AC6 7 GLU A 37 MET A 67 GLN A 70 ALA B 619 SITE 2 AC6 7 ARG B 688 HOH B2131 HOH B2253 SITE 1 AC7 6 GLU B 611 TYR B 615 HIS B 616 ARG B 647 SITE 2 AC7 6 TYR B 681 HOH B2283 SITE 1 AC8 2 TYR B1031 HOH B2556 SITE 1 AC9 5 SER B 793 ASP B 794 PRO B 978 TYR B 979 SITE 2 AC9 5 HOH B2355 SITE 1 AD1 5 ARG B 786 GLU B 864 VAL B1040 HOH B2102 SITE 2 AD1 5 HOH B2206 SITE 1 AD2 8 LEU B 938 GLY C 15 LYS C 16 SER C 17 SITE 2 AD2 8 ALA C 59 HOH C 305 HOH C 402 HOH C 415 SITE 1 AD3 6 ASN C 85 ASN C 86 THR C 87 THR C 124 SITE 2 AD3 6 HOH C 477 HOH C 487 CRYST1 184.329 184.329 179.083 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005425 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005425 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005584 0.00000