HEADER SIGNALING PROTEIN 13-DEC-17 6BVK
TITLE RAS:SOS:RAS IN COMPLEX WITH A SMALL MOLECULE ACTIVATOR
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: GTPASE HRAS;
COMPND 3 CHAIN: A;
COMPND 4 SYNONYM: H-RAS-1,HA-RAS,TRANSFORMING PROTEIN P21,C-H-RAS,P21RAS;
COMPND 5 ENGINEERED: YES;
COMPND 6 MUTATION: YES;
COMPND 7 MOL_ID: 2;
COMPND 8 MOLECULE: SON OF SEVENLESS HOMOLOG 1;
COMPND 9 CHAIN: B;
COMPND 10 ENGINEERED: YES;
COMPND 11 MOL_ID: 3;
COMPND 12 MOLECULE: GTPASE HRAS;
COMPND 13 CHAIN: C;
COMPND 14 SYNONYM: H-RAS-1,HA-RAS,TRANSFORMING PROTEIN P21,C-H-RAS,P21RAS;
COMPND 15 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: HRAS, HRAS1;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 8 MOL_ID: 2;
SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 10 ORGANISM_COMMON: HUMAN;
SOURCE 11 ORGANISM_TAXID: 9606;
SOURCE 12 GENE: SOS1;
SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 15 MOL_ID: 3;
SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 17 ORGANISM_COMMON: HUMAN;
SOURCE 18 ORGANISM_TAXID: 9606;
SOURCE 19 GENE: HRAS, HRAS1;
SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 21 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS RAS, SOS, INHIBITOR, ONCOPROTEIN, PROTEIN-PROTEIN COMPLEX, MAPK,
KEYWDS 2 SIGNALING PROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR J.PHAN,J.ABBOTT,S.W.FESIK
REVDAT 3 16-OCT-24 6BVK 1 LINK
REVDAT 2 01-MAY-19 6BVK 1 JRNL
REVDAT 1 24-OCT-18 6BVK 0
JRNL AUTH J.R.ABBOTT,T.R.HODGES,R.N.DANIELS,P.A.PATEL,J.P.KENNEDY,
JRNL AUTH 2 J.E.HOWES,D.T.AKAN,M.C.BURNS,J.SAI,T.SOBOLIK,Y.BEESETTY,
JRNL AUTH 3 T.LEE,O.W.ROSSANESE,J.PHAN,A.G.WATERSON,S.W.FESIK
JRNL TITL DISCOVERY OF AMINOPIPERIDINE INDOLES THAT ACTIVATE THE
JRNL TITL 2 GUANINE NUCLEOTIDE EXCHANGE FACTOR SOS1 AND MODULATE RAS
JRNL TITL 3 SIGNALING.
JRNL REF J. MED. CHEM. V. 61 6002 2018
JRNL REFN ISSN 1520-4804
JRNL PMID 29856609
JRNL DOI 10.1021/ACS.JMEDCHEM.8B00360
REMARK 1
REMARK 1 REFERENCE 1
REMARK 1 AUTH M.C.BURNS,Q.SUN,R.N.DANIELS,D.CAMPER,J.P.KENNEDY,J.PHAN,
REMARK 1 AUTH 2 E.T.OLEJNICZAK,T.LEE,A.G.WATERSON,O.W.ROSSANESE,S.W.FESIK
REMARK 1 TITL APPROACH FOR TARGETING RAS WITH SMALL MOLECULES THAT
REMARK 1 TITL 2 ACTIVATE SOS-MEDIATED NUCLEOTIDE EXCHANGE.
REMARK 1 REF PROC. NATL. ACAD. SCI. V. 111 3401 2014
REMARK 1 REF 2 U.S.A.
REMARK 1 REFN ESSN 1091-6490
REMARK 1 PMID 24550516
REMARK 1 DOI 10.1073/PNAS.1315798111
REMARK 2
REMARK 2 RESOLUTION. 1.80 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX (1.12RC1_2801: ???)
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : NULL
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.53
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9
REMARK 3 NUMBER OF REFLECTIONS : 141270
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.156
REMARK 3 R VALUE (WORKING SET) : 0.155
REMARK 3 FREE R VALUE : 0.179
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.870
REMARK 3 FREE R VALUE TEST SET COUNT : 6876
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 33.6420 - 5.5812 1.00 4803 207 0.1698 0.1837
REMARK 3 2 5.5812 - 4.4332 1.00 4660 179 0.1384 0.1461
REMARK 3 3 4.4332 - 3.8738 1.00 4600 191 0.1223 0.1468
REMARK 3 4 3.8738 - 3.5200 1.00 4538 224 0.1309 0.1383
REMARK 3 5 3.5200 - 3.2679 1.00 4553 207 0.1424 0.1748
REMARK 3 6 3.2679 - 3.0754 1.00 4479 253 0.1492 0.1597
REMARK 3 7 3.0754 - 2.9215 1.00 4482 253 0.1550 0.1885
REMARK 3 8 2.9215 - 2.7943 1.00 4421 298 0.1567 0.1856
REMARK 3 9 2.7943 - 2.6868 1.00 4477 251 0.1617 0.1834
REMARK 3 10 2.6868 - 2.5941 1.00 4454 223 0.1584 0.1882
REMARK 3 11 2.5941 - 2.5131 1.00 4486 235 0.1491 0.1882
REMARK 3 12 2.5131 - 2.4412 1.00 4499 206 0.1546 0.1824
REMARK 3 13 2.4412 - 2.3770 1.00 4472 245 0.1552 0.1767
REMARK 3 14 2.3770 - 2.3190 1.00 4408 258 0.1548 0.1745
REMARK 3 15 2.3190 - 2.2663 1.00 4462 235 0.1555 0.1745
REMARK 3 16 2.2663 - 2.2181 1.00 4479 204 0.1509 0.1699
REMARK 3 17 2.2181 - 2.1737 1.00 4509 193 0.1514 0.1926
REMARK 3 18 2.1737 - 2.1327 1.00 4409 251 0.1521 0.1817
REMARK 3 19 2.1327 - 2.0946 1.00 4446 255 0.1510 0.1777
REMARK 3 20 2.0946 - 2.0591 1.00 4451 214 0.1595 0.1832
REMARK 3 21 2.0591 - 2.0259 1.00 4439 229 0.1634 0.1898
REMARK 3 22 2.0259 - 1.9948 1.00 4483 208 0.1696 0.1894
REMARK 3 23 1.9948 - 1.9654 1.00 4420 249 0.1799 0.1942
REMARK 3 24 1.9654 - 1.9377 1.00 4412 261 0.1933 0.2272
REMARK 3 25 1.9377 - 1.9116 1.00 4419 264 0.1954 0.2094
REMARK 3 26 1.9116 - 1.8867 1.00 4429 220 0.1984 0.2025
REMARK 3 27 1.8867 - 1.8631 1.00 4443 195 0.2049 0.2336
REMARK 3 28 1.8631 - 1.8407 1.00 4455 236 0.2172 0.2543
REMARK 3 29 1.8407 - 1.8193 1.00 4450 210 0.2294 0.2431
REMARK 3 30 1.8193 - 1.7989 0.99 4356 222 0.2276 0.2663
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : NULL
REMARK 3 SOLVENT RADIUS : 1.11
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.540
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : 0.007 7103
REMARK 3 ANGLE : 0.843 9647
REMARK 3 CHIRALITY : 0.053 1045
REMARK 3 PLANARITY : 0.005 1300
REMARK 3 DIHEDRAL : 14.636 4384
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 17
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 36 )
REMARK 3 ORIGIN FOR THE GROUP (A): 19.6475 50.2618 62.3480
REMARK 3 T TENSOR
REMARK 3 T11: 0.1210 T22: 0.1316
REMARK 3 T33: 0.1418 T12: -0.0218
REMARK 3 T13: 0.0168 T23: -0.0125
REMARK 3 L TENSOR
REMARK 3 L11: 0.0230 L22: 0.0391
REMARK 3 L33: 0.0543 L12: 0.0227
REMARK 3 L13: 0.0165 L23: 0.0263
REMARK 3 S TENSOR
REMARK 3 S11: 0.0428 S12: 0.0080 S13: -0.0292
REMARK 3 S21: -0.0168 S22: -0.0085 S23: 0.0880
REMARK 3 S31: 0.0730 S32: -0.0382 S33: 0.0000
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 37 THROUGH 52 )
REMARK 3 ORIGIN FOR THE GROUP (A): 29.2853 45.1126 56.7654
REMARK 3 T TENSOR
REMARK 3 T11: 0.1194 T22: 0.1468
REMARK 3 T33: 0.1132 T12: -0.0516
REMARK 3 T13: 0.0180 T23: -0.0199
REMARK 3 L TENSOR
REMARK 3 L11: 0.0262 L22: 0.0075
REMARK 3 L33: 0.0386 L12: 0.0066
REMARK 3 L13: 0.0406 L23: 0.0005
REMARK 3 S TENSOR
REMARK 3 S11: -0.0293 S12: -0.0917 S13: -0.0125
REMARK 3 S21: 0.0888 S22: 0.0241 S23: -0.0266
REMARK 3 S31: -0.0720 S32: 0.0828 S33: -0.0003
REMARK 3 TLS GROUP : 3
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 53 THROUGH 76 )
REMARK 3 ORIGIN FOR THE GROUP (A): 24.1419 46.0680 73.3244
REMARK 3 T TENSOR
REMARK 3 T11: 0.2038 T22: 0.1777
REMARK 3 T33: 0.1267 T12: -0.0432
REMARK 3 T13: 0.0226 T23: 0.0069
REMARK 3 L TENSOR
REMARK 3 L11: 0.0119 L22: -0.0052
REMARK 3 L33: 0.0132 L12: 0.0049
REMARK 3 L13: 0.0178 L23: 0.0036
REMARK 3 S TENSOR
REMARK 3 S11: 0.0243 S12: -0.1290 S13: -0.0799
REMARK 3 S21: 0.1855 S22: -0.0640 S23: 0.0528
REMARK 3 S31: 0.1648 S32: -0.0532 S33: -0.0000
REMARK 3 TLS GROUP : 4
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 77 THROUGH 116 )
REMARK 3 ORIGIN FOR THE GROUP (A): 27.2944 57.2204 74.7271
REMARK 3 T TENSOR
REMARK 3 T11: 0.1580 T22: 0.1771
REMARK 3 T33: 0.1238 T12: -0.0463
REMARK 3 T13: 0.0180 T23: -0.0331
REMARK 3 L TENSOR
REMARK 3 L11: 0.0571 L22: 0.0487
REMARK 3 L33: 0.0139 L12: 0.0557
REMARK 3 L13: 0.0134 L23: 0.0205
REMARK 3 S TENSOR
REMARK 3 S11: 0.1135 S12: -0.2684 S13: 0.1382
REMARK 3 S21: 0.1245 S22: -0.0343 S23: 0.0391
REMARK 3 S31: -0.0475 S32: 0.0644 S33: 0.0028
REMARK 3 TLS GROUP : 5
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 117 THROUGH 151 )
REMARK 3 ORIGIN FOR THE GROUP (A): 24.7408 66.1380 65.7562
REMARK 3 T TENSOR
REMARK 3 T11: 0.1580 T22: 0.1178
REMARK 3 T33: 0.1865 T12: -0.0280
REMARK 3 T13: 0.0313 T23: -0.0213
REMARK 3 L TENSOR
REMARK 3 L11: 0.0341 L22: 0.0565
REMARK 3 L33: 0.0333 L12: 0.0586
REMARK 3 L13: -0.0426 L23: -0.0507
REMARK 3 S TENSOR
REMARK 3 S11: 0.0442 S12: -0.0384 S13: 0.1759
REMARK 3 S21: -0.0511 S22: -0.0148 S23: 0.0909
REMARK 3 S31: -0.1584 S32: 0.0480 S33: -0.0000
REMARK 3 TLS GROUP : 6
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 152 THROUGH 166 )
REMARK 3 ORIGIN FOR THE GROUP (A): 34.6833 54.1071 60.7145
REMARK 3 T TENSOR
REMARK 3 T11: 0.1381 T22: 0.1678
REMARK 3 T33: 0.1236 T12: -0.0416
REMARK 3 T13: 0.0134 T23: -0.0142
REMARK 3 L TENSOR
REMARK 3 L11: 0.0114 L22: 0.0061
REMARK 3 L33: 0.0127 L12: -0.0105
REMARK 3 L13: -0.0126 L23: 0.0034
REMARK 3 S TENSOR
REMARK 3 S11: 0.0376 S12: -0.0029 S13: 0.0438
REMARK 3 S21: 0.0292 S22: -0.0776 S23: -0.0487
REMARK 3 S31: -0.0488 S32: 0.1079 S33: -0.0000
REMARK 3 TLS GROUP : 7
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 565 THROUGH 723 )
REMARK 3 ORIGIN FOR THE GROUP (A): 12.9794 31.1171 78.0127
REMARK 3 T TENSOR
REMARK 3 T11: 0.1114 T22: 0.1239
REMARK 3 T33: 0.0929 T12: -0.0213
REMARK 3 T13: 0.0016 T23: 0.0039
REMARK 3 L TENSOR
REMARK 3 L11: 0.0856 L22: 0.1835
REMARK 3 L33: 0.3205 L12: -0.1129
REMARK 3 L13: -0.1935 L23: 0.0517
REMARK 3 S TENSOR
REMARK 3 S11: -0.0195 S12: 0.0018 S13: 0.0127
REMARK 3 S21: 0.0202 S22: -0.0042 S23: 0.0324
REMARK 3 S31: 0.0146 S32: 0.0419 S33: 0.0000
REMARK 3 TLS GROUP : 8
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 724 THROUGH 768 )
REMARK 3 ORIGIN FOR THE GROUP (A): 9.5541 49.4788 52.5579
REMARK 3 T TENSOR
REMARK 3 T11: 0.1702 T22: 0.1517
REMARK 3 T33: 0.1645 T12: -0.0238
REMARK 3 T13: 0.0110 T23: 0.0192
REMARK 3 L TENSOR
REMARK 3 L11: 0.0331 L22: 0.0359
REMARK 3 L33: 0.0549 L12: -0.0178
REMARK 3 L13: 0.0178 L23: 0.0561
REMARK 3 S TENSOR
REMARK 3 S11: 0.1051 S12: 0.0128 S13: 0.0700
REMARK 3 S21: 0.0541 S22: 0.0554 S23: 0.0997
REMARK 3 S31: -0.2807 S32: -0.0649 S33: -0.0001
REMARK 3 TLS GROUP : 9
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 769 THROUGH 1046 )
REMARK 3 ORIGIN FOR THE GROUP (A): 22.5102 33.8015 32.8561
REMARK 3 T TENSOR
REMARK 3 T11: 0.0458 T22: 0.0567
REMARK 3 T33: 0.0531 T12: -0.0231
REMARK 3 T13: 0.0092 T23: -0.0068
REMARK 3 L TENSOR
REMARK 3 L11: 0.1516 L22: 0.3344
REMARK 3 L33: 0.5732 L12: 0.0361
REMARK 3 L13: -0.0775 L23: -0.1532
REMARK 3 S TENSOR
REMARK 3 S11: -0.0328 S12: 0.0190 S13: -0.0041
REMARK 3 S21: -0.0144 S22: 0.0252 S23: -0.0147
REMARK 3 S31: -0.0048 S32: 0.0289 S33: 0.0230
REMARK 3 TLS GROUP : 10
REMARK 3 SELECTION: CHAIN 'C' AND (RESID 0 THROUGH 24 )
REMARK 3 ORIGIN FOR THE GROUP (A): 31.7450 12.2649 41.6185
REMARK 3 T TENSOR
REMARK 3 T11: 0.1265 T22: 0.1245
REMARK 3 T33: 0.2071 T12: 0.0209
REMARK 3 T13: -0.0042 T23: -0.0017
REMARK 3 L TENSOR
REMARK 3 L11: -0.0005 L22: 0.0477
REMARK 3 L33: 0.0134 L12: -0.0102
REMARK 3 L13: 0.0120 L23: -0.0348
REMARK 3 S TENSOR
REMARK 3 S11: -0.0413 S12: 0.0223 S13: 0.1245
REMARK 3 S21: 0.1311 S22: 0.0201 S23: -0.1669
REMARK 3 S31: 0.0382 S32: 0.0012 S33: 0.0000
REMARK 3 TLS GROUP : 11
REMARK 3 SELECTION: CHAIN 'C' AND (RESID 25 THROUGH 34 )
REMARK 3 ORIGIN FOR THE GROUP (A): 32.2379 12.6037 55.8548
REMARK 3 T TENSOR
REMARK 3 T11: 0.3087 T22: 0.1477
REMARK 3 T33: 0.4125 T12: 0.0462
REMARK 3 T13: -0.1204 T23: 0.0758
REMARK 3 L TENSOR
REMARK 3 L11: -0.0029 L22: 0.0070
REMARK 3 L33: 0.0016 L12: -0.0035
REMARK 3 L13: -0.0004 L23: -0.0067
REMARK 3 S TENSOR
REMARK 3 S11: 0.0291 S12: 0.0344 S13: -0.0675
REMARK 3 S21: 0.0471 S22: 0.0476 S23: 0.0106
REMARK 3 S31: 0.1023 S32: 0.0003 S33: 0.0000
REMARK 3 TLS GROUP : 12
REMARK 3 SELECTION: CHAIN 'C' AND (RESID 35 THROUGH 48 )
REMARK 3 ORIGIN FOR THE GROUP (A): 39.9781 14.3006 46.0270
REMARK 3 T TENSOR
REMARK 3 T11: 0.2098 T22: 0.2330
REMARK 3 T33: 0.4064 T12: 0.0522
REMARK 3 T13: -0.0919 T23: 0.0030
REMARK 3 L TENSOR
REMARK 3 L11: 0.0006 L22: 0.0017
REMARK 3 L33: 0.0030 L12: 0.0027
REMARK 3 L13: -0.0119 L23: 0.0018
REMARK 3 S TENSOR
REMARK 3 S11: -0.0264 S12: -0.0734 S13: 0.0170
REMARK 3 S21: 0.0494 S22: -0.1188 S23: -0.0451
REMARK 3 S31: -0.1069 S32: 0.1106 S33: -0.0000
REMARK 3 TLS GROUP : 13
REMARK 3 SELECTION: CHAIN 'C' AND (RESID 49 THROUGH 74 )
REMARK 3 ORIGIN FOR THE GROUP (A): 29.4671 19.2447 36.0046
REMARK 3 T TENSOR
REMARK 3 T11: 0.0969 T22: 0.0830
REMARK 3 T33: 0.1516 T12: -0.0008
REMARK 3 T13: 0.0099 T23: 0.0065
REMARK 3 L TENSOR
REMARK 3 L11: 0.0138 L22: 0.0495
REMARK 3 L33: 0.0878 L12: 0.0218
REMARK 3 L13: 0.0559 L23: 0.0406
REMARK 3 S TENSOR
REMARK 3 S11: -0.0533 S12: -0.0221 S13: -0.0117
REMARK 3 S21: -0.0407 S22: 0.0010 S23: -0.1658
REMARK 3 S31: -0.0485 S32: 0.0175 S33: -0.0008
REMARK 3 TLS GROUP : 14
REMARK 3 SELECTION: CHAIN 'C' AND (RESID 75 THROUGH 117 )
REMARK 3 ORIGIN FOR THE GROUP (A): 23.4409 8.8774 31.5835
REMARK 3 T TENSOR
REMARK 3 T11: 0.1262 T22: 0.1078
REMARK 3 T33: 0.1248 T12: 0.0188
REMARK 3 T13: 0.0189 T23: 0.0044
REMARK 3 L TENSOR
REMARK 3 L11: 0.0027 L22: 0.1086
REMARK 3 L33: 0.0267 L12: -0.0070
REMARK 3 L13: -0.0319 L23: 0.0137
REMARK 3 S TENSOR
REMARK 3 S11: 0.0628 S12: 0.0488 S13: -0.0041
REMARK 3 S21: -0.1209 S22: -0.0274 S23: 0.0343
REMARK 3 S31: 0.0196 S32: 0.0312 S33: -0.0000
REMARK 3 TLS GROUP : 15
REMARK 3 SELECTION: CHAIN 'C' AND (RESID 118 THROUGH 137 )
REMARK 3 ORIGIN FOR THE GROUP (A): 18.0925 -1.8695 36.4868
REMARK 3 T TENSOR
REMARK 3 T11: 0.1479 T22: 0.1042
REMARK 3 T33: 0.1795 T12: 0.0084
REMARK 3 T13: 0.0089 T23: -0.0257
REMARK 3 L TENSOR
REMARK 3 L11: 0.0150 L22: 0.0116
REMARK 3 L33: 0.0197 L12: -0.0035
REMARK 3 L13: 0.0186 L23: -0.0121
REMARK 3 S TENSOR
REMARK 3 S11: 0.0824 S12: -0.0385 S13: -0.0096
REMARK 3 S21: -0.0539 S22: -0.0254 S23: 0.1873
REMARK 3 S31: 0.1069 S32: 0.0130 S33: -0.0000
REMARK 3 TLS GROUP : 16
REMARK 3 SELECTION: CHAIN 'C' AND (RESID 138 THROUGH 151 )
REMARK 3 ORIGIN FOR THE GROUP (A): 26.3707 1.0636 43.3012
REMARK 3 T TENSOR
REMARK 3 T11: 0.1283 T22: 0.1201
REMARK 3 T33: 0.1285 T12: 0.0227
REMARK 3 T13: 0.0051 T23: -0.0069
REMARK 3 L TENSOR
REMARK 3 L11: 0.0040 L22: 0.0115
REMARK 3 L33: 0.0031 L12: -0.0073
REMARK 3 L13: 0.0077 L23: -0.0055
REMARK 3 S TENSOR
REMARK 3 S11: 0.0097 S12: -0.0852 S13: -0.0094
REMARK 3 S21: 0.0651 S22: -0.0063 S23: -0.0692
REMARK 3 S31: -0.0243 S32: -0.0342 S33: 0.0000
REMARK 3 TLS GROUP : 17
REMARK 3 SELECTION: CHAIN 'C' AND (RESID 152 THROUGH 166 )
REMARK 3 ORIGIN FOR THE GROUP (A): 37.0059 3.3653 37.0193
REMARK 3 T TENSOR
REMARK 3 T11: 0.1111 T22: 0.1162
REMARK 3 T33: 0.1865 T12: 0.0345
REMARK 3 T13: 0.0267 T23: -0.0036
REMARK 3 L TENSOR
REMARK 3 L11: 0.0122 L22: 0.0110
REMARK 3 L33: 0.0000 L12: -0.0061
REMARK 3 L13: 0.0001 L23: -0.0030
REMARK 3 S TENSOR
REMARK 3 S11: 0.0387 S12: 0.0160 S13: 0.0350
REMARK 3 S21: -0.0874 S22: -0.0550 S23: -0.1487
REMARK 3 S31: 0.1230 S32: 0.0374 S33: 0.0010
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 6BVK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-DEC-17.
REMARK 100 THE DEPOSITION ID IS D_1000231302.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 13-JUL-17
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : NULL
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : APS
REMARK 200 BEAMLINE : 21-ID-F
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.98
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000
REMARK 200 DATA SCALING SOFTWARE : HKL-2000
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 141274
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.799
REMARK 200 RESOLUTION RANGE LOW (A) : 33.530
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9
REMARK 200 DATA REDUNDANCY : 12.00
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 18.5000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 69.49
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.03
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE, 2.0 M SODIUM
REMARK 280 FORMATE, PH 4.0, VAPOR DIFFUSION, TEMPERATURE 292K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z
REMARK 290 3555 -Y,X,Z
REMARK 290 4555 Y,-X,Z
REMARK 290 5555 -X,Y,-Z
REMARK 290 6555 X,-Y,-Z
REMARK 290 7555 Y,X,-Z
REMARK 290 8555 -Y,-X,-Z
REMARK 290 9555 X+1/2,Y+1/2,Z+1/2
REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2
REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2
REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2
REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2
REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2
REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2
REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 92.21050
REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 92.21050
REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 89.50400
REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 92.21050
REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 92.21050
REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 89.50400
REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 92.21050
REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 92.21050
REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 89.50400
REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 92.21050
REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 92.21050
REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 89.50400
REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 92.21050
REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 92.21050
REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 89.50400
REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 92.21050
REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 92.21050
REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 89.50400
REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 92.21050
REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 92.21050
REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 89.50400
REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 92.21050
REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 92.21050
REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 89.50400
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 8890 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 35940 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 375
REMARK 375 SPECIAL POSITION
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL
REMARK 375 POSITIONS.
REMARK 375
REMARK 375 ATOM RES CSSEQI
REMARK 375 HOH B2862 LIES ON A SPECIAL POSITION.
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 GLY A 0
REMARK 465 ASN B 591
REMARK 465 MET B 592
REMARK 465 GLN B 593
REMARK 465 PRO B 594
REMARK 465 LYS B 595
REMARK 465 ALA B 596
REMARK 465 ARG B 744
REMARK 465 ASP B 745
REMARK 465 ASN B 746
REMARK 465 GLY B 747
REMARK 465 PRO B 748
REMARK 465 GLY B 749
REMARK 465 HIS B 750
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O HOH B 2105 O HOH B 2153 1.84
REMARK 500 O HOH A 421 O HOH B 2640 1.85
REMARK 500 O HOH B 2335 O HOH B 2551 1.86
REMARK 500 O HOH C 489 O HOH C 491 1.86
REMARK 500 O HOH B 2594 O HOH B 2830 1.86
REMARK 500 O HOH A 377 O HOH A 472 1.87
REMARK 500 O HOH C 361 O HOH C 527 1.90
REMARK 500 OE1 GLU B 954 O HOH B 2101 1.91
REMARK 500 O HOH B 2635 O HOH B 2670 1.93
REMARK 500 O HOH B 2212 O HOH C 456 1.94
REMARK 500 O HOH B 2610 O HOH B 2649 1.94
REMARK 500 O HOH B 2131 O HOH B 2579 1.95
REMARK 500 O HOH C 488 O HOH C 518 1.96
REMARK 500 O HOH B 2192 O HOH B 2341 1.96
REMARK 500 O PRO B 621 O HOH B 2102 1.96
REMARK 500 O2 GOL B 2008 O HOH B 2103 1.96
REMARK 500 O HOH B 2271 O HOH B 2677 1.96
REMARK 500 O HOH A 357 O HOH A 477 1.98
REMARK 500 O HOH B 2464 O HOH B 2756 1.98
REMARK 500 O HOH B 2636 O HOH C 501 1.99
REMARK 500 O HOH B 2234 O HOH C 464 2.00
REMARK 500 OE1 GLN B 892 O HOH B 2104 2.01
REMARK 500 O HOH C 393 O HOH C 415 2.01
REMARK 500 OE1 GLN A 129 O HOH A 301 2.01
REMARK 500 NH1 ARG C 68 O HOH C 301 2.04
REMARK 500 O HOH B 2731 O HOH B 2763 2.06
REMARK 500 O HOH B 2801 O HOH B 2826 2.07
REMARK 500 O HOH B 2436 O HOH B 2786 2.08
REMARK 500 O HOH B 2449 O HOH B 2662 2.08
REMARK 500 O HOH B 2168 O HOH B 2548 2.09
REMARK 500 O HOH B 2543 O HOH B 2704 2.09
REMARK 500 O HOH A 437 O HOH A 486 2.09
REMARK 500 O HOH B 2114 O HOH B 2513 2.09
REMARK 500 O HOH A 436 O HOH A 463 2.10
REMARK 500 O HOH B 2175 O HOH B 2616 2.10
REMARK 500 O HOH C 346 O HOH C 408 2.11
REMARK 500 O HOH B 2365 O HOH B 2764 2.11
REMARK 500 O2 FMT C 201 O HOH C 302 2.12
REMARK 500 NH1 ARG B 896 O HOH B 2105 2.12
REMARK 500 O HOH B 2662 O HOH B 2774 2.12
REMARK 500 O HOH B 2501 O HOH B 2627 2.12
REMARK 500 O HOH B 2391 O HOH B 2647 2.15
REMARK 500 O HOH A 439 O HOH A 491 2.15
REMARK 500 OE1 GLU B 680 O HOH B 2106 2.16
REMARK 500 O HOH A 454 O HOH B 2774 2.16
REMARK 500 O HOH B 2580 O HOH B 2649 2.16
REMARK 500 O HOH C 334 O HOH C 504 2.16
REMARK 500 O HOH B 2268 O HOH B 2812 2.16
REMARK 500 O HOH B 2531 O HOH B 2631 2.17
REMARK 500 O HOH B 2649 O HOH B 2767 2.17
REMARK 500
REMARK 500 THIS ENTRY HAS 55 CLOSE CONTACTS
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375
REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.
REMARK 500
REMARK 500 DISTANCE CUTOFF:
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE
REMARK 500 O HOH B 2700 O HOH B 2718 7555 1.90
REMARK 500 O HOH B 2735 O HOH C 515 3555 2.17
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ILE A 36 -64.09 -99.24
REMARK 500 LYS A 117 35.31 71.80
REMARK 500 ARG A 149 -3.85 81.72
REMARK 500 HIS B 764 -118.37 -124.71
REMARK 500 HIS B 770 62.49 -102.15
REMARK 500 GLN C 25 150.74 -49.39
REMARK 500 ASN C 26 98.99 -43.60
REMARK 500 GLU C 37 114.18 -32.18
REMARK 500 ASP C 38 45.48 70.22
REMARK 500 ASP C 38 45.66 70.22
REMARK 500 ASP C 119 -167.94 -162.80
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS
REMARK 500
REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH
REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED
REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND
REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES.
REMARK 500 MODEL OMEGA
REMARK 500 GLN C 25 ASN C 26 144.60
REMARK 500
REMARK 500 REMARK: NULL
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MG A 202 MG
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 SER A 17 OG
REMARK 620 2 THR A 35 OG1 83.1
REMARK 620 3 GNP A 201 O1G 172.1 89.6
REMARK 620 4 GNP A 201 O1B 93.2 176.0 94.2
REMARK 620 5 HOH A 324 O 84.9 88.1 92.1 92.8
REMARK 620 6 HOH A 355 O 89.4 89.4 93.3 89.3 174.0
REMARK 620 N 1 2 3 4 5
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 NA C 202 NA
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 THR C 124 OG1
REMARK 620 2 HOH C 481 O 92.9
REMARK 620 3 HOH C 483 O 133.9 120.7
REMARK 620 N 1 2
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue GNP A 201
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 202
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue EAV B 2001
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 2002
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 2003
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 2004
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 2005
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC8
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 2006
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC9
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 2007
REMARK 800
REMARK 800 SITE_IDENTIFIER: AD1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 2008
REMARK 800
REMARK 800 SITE_IDENTIFIER: AD2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue FMT C 201
REMARK 800
REMARK 800 SITE_IDENTIFIER: AD3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue NA C 202
DBREF 6BVK A 1 166 UNP P01112 RASH_HUMAN 1 166
DBREF 6BVK B 566 1046 UNP Q07889 SOS1_HUMAN 566 1046
DBREF 6BVK C 1 166 UNP P01112 RASH_HUMAN 1 166
SEQADV 6BVK GLY A 0 UNP P01112 EXPRESSION TAG
SEQADV 6BVK ALA A 64 UNP P01112 TYR 64 CONFLICT
SEQADV 6BVK GLY B 565 UNP Q07889 EXPRESSION TAG
SEQADV 6BVK GLY C 0 UNP P01112 EXPRESSION TAG
SEQRES 1 A 167 GLY MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA GLY
SEQRES 2 A 167 GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN
SEQRES 3 A 167 ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP
SEQRES 4 A 167 SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CSO
SEQRES 5 A 167 LEU LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU ALA
SEQRES 6 A 167 SER ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY
SEQRES 7 A 167 PHE LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE
SEQRES 8 A 167 GLU ASP ILE HIS GLN TYR ARG GLU GLN ILE LYS ARG VAL
SEQRES 9 A 167 LYS ASP SER ASP ASP VAL PRO MET VAL LEU VAL GLY ASN
SEQRES 10 A 167 LYS CYS ASP LEU ALA ALA ARG THR VAL GLU SER ARG GLN
SEQRES 11 A 167 ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO TYR ILE
SEQRES 12 A 167 GLU THR SER ALA LYS THR ARG GLN GLY VAL GLU ASP ALA
SEQRES 13 A 167 PHE TYR THR LEU VAL ARG GLU ILE ARG GLN HIS
SEQRES 1 B 482 GLY GLN MET ARG LEU PRO SER ALA ASP VAL TYR ARG PHE
SEQRES 2 B 482 ALA GLU PRO ASP SER GLU GLU ASN ILE ILE PHE GLU GLU
SEQRES 3 B 482 ASN MET GLN PRO LYS ALA GLY ILE PRO ILE ILE LYS ALA
SEQRES 4 B 482 GLY THR VAL ILE LYS LEU ILE GLU ARG LEU THR TYR HIS
SEQRES 5 B 482 MET TYR ALA ASP PRO ASN PHE VAL ARG THR PHE LEU THR
SEQRES 6 B 482 THR TYR ARG SER PHE CYS LYS PRO GLN GLU LEU LEU SER
SEQRES 7 B 482 LEU ILE ILE GLU ARG PHE GLU ILE PRO GLU PRO GLU PRO
SEQRES 8 B 482 THR GLU ALA ASP ARG ILE ALA ILE GLU ASN GLY ASP GLN
SEQRES 9 B 482 PRO LEU SER ALA GLU LEU LYS ARG PHE ARG LYS GLU TYR
SEQRES 10 B 482 ILE GLN PRO VAL GLN LEU ARG VAL LEU ASN VAL CYS ARG
SEQRES 11 B 482 HIS TRP VAL GLU HIS HIS PHE TYR ASP PHE GLU ARG ASP
SEQRES 12 B 482 ALA TYR LEU LEU GLN ARG MET GLU GLU PHE ILE GLY THR
SEQRES 13 B 482 VAL ARG GLY LYS ALA MET LYS LYS TRP VAL GLU SER ILE
SEQRES 14 B 482 THR LYS ILE ILE GLN ARG LYS LYS ILE ALA ARG ASP ASN
SEQRES 15 B 482 GLY PRO GLY HIS ASN ILE THR PHE GLN SER SER PRO PRO
SEQRES 16 B 482 THR VAL GLU TRP HIS ILE SER ARG PRO GLY HIS ILE GLU
SEQRES 17 B 482 THR PHE ASP LEU LEU THR LEU HIS PRO ILE GLU ILE ALA
SEQRES 18 B 482 ARG GLN LEU THR LEU LEU GLU SER ASP LEU TYR ARG ALA
SEQRES 19 B 482 VAL GLN PRO SER GLU LEU VAL GLY SER VAL TRP THR LYS
SEQRES 20 B 482 GLU ASP LYS GLU ILE ASN SER PRO ASN LEU LEU LYS MET
SEQRES 21 B 482 ILE ARG HIS THR THR ASN LEU THR LEU TRP PHE GLU LYS
SEQRES 22 B 482 CYS ILE VAL GLU THR GLU ASN LEU GLU GLU ARG VAL ALA
SEQRES 23 B 482 VAL VAL SER ARG ILE ILE GLU ILE LEU GLN VAL PHE GLN
SEQRES 24 B 482 GLU LEU ASN ASN PHE ASN GLY VAL LEU GLU VAL VAL SER
SEQRES 25 B 482 ALA MET ASN SER SER PRO VAL TYR ARG LEU ASP HIS THR
SEQRES 26 B 482 PHE GLU GLN ILE PRO SER ARG GLN LYS LYS ILE LEU GLU
SEQRES 27 B 482 GLU ALA HIS GLU LEU SER GLU ASP HIS TYR LYS LYS TYR
SEQRES 28 B 482 LEU ALA LYS LEU ARG SER ILE ASN PRO PRO CYS VAL PRO
SEQRES 29 B 482 PHE PHE GLY ILE TYR LEU THR ASN ILE LEU LYS THR GLU
SEQRES 30 B 482 GLU GLY ASN PRO GLU VAL LEU LYS ARG HIS GLY LYS GLU
SEQRES 31 B 482 LEU ILE ASN PHE SER LYS ARG ARG LYS VAL ALA GLU ILE
SEQRES 32 B 482 THR GLY GLU ILE GLN GLN TYR GLN ASN GLN PRO TYR CYS
SEQRES 33 B 482 LEU ARG VAL GLU SER ASP ILE LYS ARG PHE PHE GLU ASN
SEQRES 34 B 482 LEU ASN PRO MET GLY ASN SER MET GLU LYS GLU PHE THR
SEQRES 35 B 482 ASP TYR LEU PHE ASN LYS SER LEU GLU ILE GLU PRO ARG
SEQRES 36 B 482 ASN PRO LYS PRO LEU PRO ARG PHE PRO LYS LYS TYR SER
SEQRES 37 B 482 TYR PRO LEU LYS SER PRO GLY VAL ARG PRO SER ASN PRO
SEQRES 38 B 482 ARG
SEQRES 1 C 167 GLY MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA GLY
SEQRES 2 C 167 GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN
SEQRES 3 C 167 ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP
SEQRES 4 C 167 SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CYS
SEQRES 5 C 167 LEU LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR
SEQRES 6 C 167 SER ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY
SEQRES 7 C 167 PHE LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE
SEQRES 8 C 167 GLU ASP ILE HIS GLN TYR ARG GLU GLN ILE LYS ARG VAL
SEQRES 9 C 167 LYS ASP SER ASP ASP VAL PRO MET VAL LEU VAL GLY ASN
SEQRES 10 C 167 LYS CYS ASP LEU ALA ALA ARG THR VAL GLU SER ARG GLN
SEQRES 11 C 167 ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO TYR ILE
SEQRES 12 C 167 GLU THR SER ALA LYS THR ARG GLN GLY VAL GLU ASP ALA
SEQRES 13 C 167 PHE TYR THR LEU VAL ARG GLU ILE ARG GLN HIS
MODRES 6BVK CSO A 51 CYS MODIFIED RESIDUE
HET CSO A 51 7
HET GNP A 201 32
HET MG A 202 1
HET EAV B2001 33
HET FMT B2002 3
HET FMT B2003 3
HET FMT B2004 3
HET FMT B2005 3
HET FMT B2006 3
HET GOL B2007 6
HET GOL B2008 6
HET FMT C 201 3
HET NA C 202 1
HETNAM CSO S-HYDROXYCYSTEINE
HETNAM GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
HETNAM MG MAGNESIUM ION
HETNAM EAV N-{1-[(5-CHLORO-1H-INDOL-3-YL)METHYL]PIPERIDIN-4-YL}-6-
HETNAM 2 EAV METHYL-L-TRYPTOPHANAMIDE
HETNAM FMT FORMIC ACID
HETNAM GOL GLYCEROL
HETNAM NA SODIUM ION
HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL
FORMUL 1 CSO C3 H7 N O3 S
FORMUL 4 GNP C10 H17 N6 O13 P3
FORMUL 5 MG MG 2+
FORMUL 6 EAV C26 H30 CL N5 O
FORMUL 7 FMT 6(C H2 O2)
FORMUL 12 GOL 2(C3 H8 O3)
FORMUL 15 NA NA 1+
FORMUL 16 HOH *1198(H2 O)
HELIX 1 AA1 GLY A 15 ASN A 26 1 12
HELIX 2 AA2 GLN A 61 SER A 65 5 5
HELIX 3 AA3 ARG A 68 GLY A 75 1 8
HELIX 4 AA4 ASN A 86 ASP A 92 1 7
HELIX 5 AA5 ASP A 92 ASP A 105 1 14
HELIX 6 AA6 GLU A 126 GLY A 138 1 13
HELIX 7 AA7 GLY A 151 GLN A 165 1 15
HELIX 8 AA8 TYR B 575 GLU B 579 5 5
HELIX 9 AA9 THR B 605 THR B 614 1 10
HELIX 10 AB1 ASP B 620 TYR B 631 1 12
HELIX 11 AB2 ARG B 632 PHE B 634 5 3
HELIX 12 AB3 LYS B 636 GLU B 649 1 14
HELIX 13 AB4 THR B 656 ASN B 665 1 10
HELIX 14 AB5 SER B 671 TYR B 681 1 11
HELIX 15 AB6 TYR B 681 HIS B 700 1 20
HELIX 16 AB7 PHE B 701 ARG B 706 1 6
HELIX 17 AB8 ASP B 707 THR B 720 1 14
HELIX 18 AB9 MET B 726 ILE B 742 1 17
HELIX 19 AC1 HIS B 770 PHE B 774 5 5
HELIX 20 AC2 HIS B 780 ALA B 798 1 19
HELIX 21 AC3 GLN B 800 LYS B 811 5 12
HELIX 22 AC4 ASP B 813 SER B 818 1 6
HELIX 23 AC5 SER B 818 GLU B 841 1 24
HELIX 24 AC6 ASN B 844 LEU B 865 1 22
HELIX 25 AC7 ASN B 867 ASN B 879 1 13
HELIX 26 AC8 SER B 880 ARG B 885 1 6
HELIX 27 AC9 LEU B 886 GLN B 892 1 7
HELIX 28 AD1 PRO B 894 ARG B 920 1 27
HELIX 29 AD2 PHE B 930 GLY B 943 1 14
HELIX 30 AD3 PHE B 958 GLN B 975 1 18
HELIX 31 AD4 GLU B 984 ASN B 993 1 10
HELIX 32 AD5 MET B 1001 GLU B 1017 1 17
HELIX 33 AD6 SER C 17 GLN C 25 1 9
HELIX 34 AD7 TYR C 64 ALA C 66 5 3
HELIX 35 AD8 MET C 67 THR C 74 1 8
HELIX 36 AD9 ASN C 86 ASP C 92 1 7
HELIX 37 AE1 ASP C 92 ASP C 105 1 14
HELIX 38 AE2 GLU C 126 GLY C 138 1 13
HELIX 39 AE3 GLY C 151 GLN C 165 1 15
SHEET 1 AA1 6 GLU A 37 ILE A 46 0
SHEET 2 AA1 6 GLU A 49 THR A 58 -1 O LEU A 53 N LYS A 42
SHEET 3 AA1 6 THR A 2 GLY A 10 1 N LEU A 6 O ASP A 54
SHEET 4 AA1 6 GLY A 77 ALA A 83 1 O VAL A 81 N VAL A 9
SHEET 5 AA1 6 MET A 111 ASN A 116 1 O ASN A 116 N PHE A 82
SHEET 6 AA1 6 TYR A 141 GLU A 143 1 O ILE A 142 N LEU A 113
SHEET 1 AA2 4 ILE B 586 PHE B 588 0
SHEET 2 AA2 4 ILE B 601 GLY B 604 -1 O ALA B 603 N ILE B 587
SHEET 3 AA2 4 LYS B 953 ASN B 957 -1 O ILE B 956 N GLY B 604
SHEET 4 AA2 4 VAL B 947 ARG B 950 -1 N LEU B 948 O LEU B 955
SHEET 1 AA3 6 ARG C 41 ILE C 46 0
SHEET 2 AA3 6 GLU C 49 ASP C 57 -1 O LEU C 53 N LYS C 42
SHEET 3 AA3 6 THR C 2 GLY C 10 1 N LEU C 6 O LEU C 56
SHEET 4 AA3 6 GLY C 77 ALA C 83 1 O LEU C 79 N VAL C 9
SHEET 5 AA3 6 MET C 111 LYS C 117 1 O ASN C 116 N PHE C 82
SHEET 6 AA3 6 TYR C 141 SER C 145 1 O THR C 144 N LYS C 117
LINK C THR A 50 N CSO A 51 1555 1555 1.32
LINK C CSO A 51 N LEU A 52 1555 1555 1.32
LINK OG SER A 17 MG MG A 202 1555 1555 2.09
LINK OG1 THR A 35 MG MG A 202 1555 1555 2.08
LINK O1G GNP A 201 MG MG A 202 1555 1555 2.02
LINK O1B GNP A 201 MG MG A 202 1555 1555 2.07
LINK MG MG A 202 O HOH A 324 1555 1555 2.10
LINK MG MG A 202 O HOH A 355 1555 1555 2.10
LINK OG1 THR C 124 NA NA C 202 1555 1555 3.18
LINK NA NA C 202 O HOH C 481 1555 1555 2.78
LINK NA NA C 202 O HOH C 483 1555 1555 2.33
CISPEP 1 PRO B 924 PRO B 925 0 11.46
CISPEP 2 ASN B 1020 PRO B 1021 0 5.79
SITE 1 AC1 30 GLY A 12 GLY A 13 VAL A 14 GLY A 15
SITE 2 AC1 30 LYS A 16 SER A 17 ALA A 18 PHE A 28
SITE 3 AC1 30 VAL A 29 ASP A 30 GLU A 31 TYR A 32
SITE 4 AC1 30 PRO A 34 THR A 35 GLY A 60 GLN A 61
SITE 5 AC1 30 ASN A 116 LYS A 117 ASP A 119 LEU A 120
SITE 6 AC1 30 SER A 145 ALA A 146 LYS A 147 MG A 202
SITE 7 AC1 30 HOH A 324 HOH A 338 HOH A 355 HOH A 375
SITE 8 AC1 30 HOH A 406 HOH A 419
SITE 1 AC2 5 SER A 17 THR A 35 GNP A 201 HOH A 324
SITE 2 AC2 5 HOH A 355
SITE 1 AC3 8 MET B 878 ASN B 879 TYR B 884 PHE B 890
SITE 2 AC3 8 LYS B 898 GLU B 902 HOH B2160 HOH B2489
SITE 1 AC4 6 GLN B 566 MET B 567 HIS B 616 MET B 617
SITE 2 AC4 6 HOH B2148 HOH B2174
SITE 1 AC5 3 ARG A 128 ARG B 767 PRO B 768
SITE 1 AC6 7 GLU A 37 MET A 67 GLN A 70 ALA B 619
SITE 2 AC6 7 ARG B 688 HOH B2157 HOH B2244
SITE 1 AC7 5 TYR B 615 HIS B 616 ARG B 647 TYR B 681
SITE 2 AC7 5 HOH B2278
SITE 1 AC8 2 TYR B1031 HOH B2537
SITE 1 AC9 5 SER B 793 ASP B 794 PRO B 978 TYR B 979
SITE 2 AC9 5 HOH B2378
SITE 1 AD1 5 ARG B 786 GLU B 864 VAL B1040 HOH B2103
SITE 2 AD1 5 HOH B2292
SITE 1 AD2 8 LEU B 938 GLY C 15 LYS C 16 SER C 17
SITE 2 AD2 8 ALA C 59 HOH C 302 HOH C 401 HOH C 402
SITE 1 AD3 6 ASN C 85 ASN C 86 THR C 87 THR C 124
SITE 2 AD3 6 HOH C 481 HOH C 483
CRYST1 184.421 184.421 179.008 90.00 90.00 90.00 I 4 2 2 16
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.005422 0.000000 0.000000 0.00000
SCALE2 0.000000 0.005422 0.000000 0.00000
SCALE3 0.000000 0.000000 0.005586 0.00000