HEADER IMMUNE SYSTEM 18-DEC-17 6BXD TITLE CRYSTAL STRUCTURE OF VARIABLE LYMPHOCYTE RECEPTOR 2 (VLR2) COMPND MOL_ID: 1; COMPND 2 MOLECULE: VARIABLE LYMPHOCYTE RECEPTOR 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: VLR2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PETROMYZON MARINUS; SOURCE 3 ORGANISM_TAXID: 7757; SOURCE 4 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 5 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS VLR, LEUCINE-RICH REPEAT, LAMPREY ANTIBODY, IMMUNE RECEPTOR, IMMUNE KEYWDS 2 SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR R.J.GUNN,I.A.WILSON,M.D.COOPER,B.R.HERRIN REVDAT 5 04-OCT-23 6BXD 1 REMARK REVDAT 4 23-MAR-22 6BXD 1 REMARK REVDAT 3 18-DEC-19 6BXD 1 REMARK REVDAT 2 20-FEB-19 6BXD 1 REMARK REVDAT 1 09-MAY-18 6BXD 0 JRNL AUTH R.J.GUNN,B.R.HERRIN,S.ACHARYA,M.D.COOPER,I.A.WILSON JRNL TITL VLR RECOGNITION OF TLR5 EXPANDS THE MOLECULAR JRNL TITL 2 CHARACTERIZATION OF PROTEIN ANTIGEN BINDING BY NON-IG-BASED JRNL TITL 3 ANTIBODIES. JRNL REF J. MOL. BIOL. V. 430 1350 2018 JRNL REFN ESSN 1089-8638 JRNL PMID 29596914 JRNL DOI 10.1016/J.JMB.2018.03.016 REMARK 2 REMARK 2 RESOLUTION. 1.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.37 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 74609 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.179 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 3716 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.3870 - 3.3074 0.99 2980 152 0.1737 0.1718 REMARK 3 2 3.3074 - 2.6254 1.00 2847 146 0.1740 0.1521 REMARK 3 3 2.6254 - 2.2936 0.99 2782 154 0.1639 0.1558 REMARK 3 4 2.2936 - 2.0839 0.99 2786 130 0.1579 0.1692 REMARK 3 5 2.0839 - 1.9346 1.00 2765 156 0.1553 0.1744 REMARK 3 6 1.9346 - 1.8205 1.00 2777 157 0.1622 0.1782 REMARK 3 7 1.8205 - 1.7293 0.99 2724 159 0.1708 0.1909 REMARK 3 8 1.7293 - 1.6541 0.99 2728 150 0.1650 0.1522 REMARK 3 9 1.6541 - 1.5904 1.00 2794 114 0.1630 0.1723 REMARK 3 10 1.5904 - 1.5355 1.00 2736 143 0.1682 0.1955 REMARK 3 11 1.5355 - 1.4875 1.00 2767 158 0.1756 0.1874 REMARK 3 12 1.4875 - 1.4450 1.00 2741 132 0.1823 0.1783 REMARK 3 13 1.4450 - 1.4069 1.00 2720 146 0.1877 0.2022 REMARK 3 14 1.4069 - 1.3726 1.00 2751 127 0.1885 0.1962 REMARK 3 15 1.3726 - 1.3414 1.00 2719 142 0.1926 0.2138 REMARK 3 16 1.3414 - 1.3128 1.00 2735 151 0.1938 0.1975 REMARK 3 17 1.3128 - 1.2866 0.99 2717 134 0.2059 0.2040 REMARK 3 18 1.2866 - 1.2623 1.00 2733 166 0.2040 0.2218 REMARK 3 19 1.2623 - 1.2398 1.00 2709 133 0.2189 0.2495 REMARK 3 20 1.2398 - 1.2187 0.98 2691 137 0.2197 0.1943 REMARK 3 21 1.2187 - 1.1991 0.97 2623 141 0.2265 0.2130 REMARK 3 22 1.1991 - 1.1806 0.94 2608 111 0.2341 0.2542 REMARK 3 23 1.1806 - 1.1633 0.88 2386 127 0.2457 0.2534 REMARK 3 24 1.1633 - 1.1469 0.85 2323 124 0.2549 0.2581 REMARK 3 25 1.1469 - 1.1314 0.77 2083 117 0.2613 0.2864 REMARK 3 26 1.1314 - 1.1167 0.73 1983 110 0.2798 0.3110 REMARK 3 27 1.1167 - 1.1027 0.63 1685 99 0.2941 0.3008 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.100 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.630 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.86 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 1531 REMARK 3 ANGLE : 0.819 2096 REMARK 3 CHIRALITY : 0.076 252 REMARK 3 PLANARITY : 0.005 267 REMARK 3 DIHEDRAL : 16.275 575 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 23 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): -72.9083 -1.1395 68.0168 REMARK 3 T TENSOR REMARK 3 T11: 0.1562 T22: 0.1625 REMARK 3 T33: 0.2020 T12: -0.0048 REMARK 3 T13: 0.0014 T23: 0.0391 REMARK 3 L TENSOR REMARK 3 L11: 8.7117 L22: 7.7857 REMARK 3 L33: 6.6086 L12: 1.9693 REMARK 3 L13: 0.1453 L23: 2.1098 REMARK 3 S TENSOR REMARK 3 S11: 0.2053 S12: 0.0266 S13: -0.0661 REMARK 3 S21: 0.0913 S22: -0.1026 S23: 0.5268 REMARK 3 S31: 0.2465 S32: -0.6850 S33: -0.1246 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 37 THROUGH 77 ) REMARK 3 ORIGIN FOR THE GROUP (A): -73.4494 7.8787 63.3578 REMARK 3 T TENSOR REMARK 3 T11: 0.0968 T22: 0.1206 REMARK 3 T33: 0.1207 T12: 0.0095 REMARK 3 T13: 0.0070 T23: 0.0058 REMARK 3 L TENSOR REMARK 3 L11: 1.2702 L22: 1.4345 REMARK 3 L33: 0.5950 L12: -0.5402 REMARK 3 L13: 0.2152 L23: 0.1619 REMARK 3 S TENSOR REMARK 3 S11: -0.0197 S12: -0.1228 S13: -0.0325 REMARK 3 S21: -0.0248 S22: 0.0109 S23: 0.1302 REMARK 3 S31: -0.0487 S32: -0.1738 S33: 0.0125 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 78 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): -64.6607 13.9937 57.7873 REMARK 3 T TENSOR REMARK 3 T11: 0.1039 T22: 0.1006 REMARK 3 T33: 0.1173 T12: 0.0021 REMARK 3 T13: 0.0018 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 1.1909 L22: 0.4468 REMARK 3 L33: 1.6345 L12: 0.0674 REMARK 3 L13: 0.4081 L23: -0.2169 REMARK 3 S TENSOR REMARK 3 S11: -0.0293 S12: -0.0047 S13: 0.0743 REMARK 3 S21: -0.0201 S22: 0.0343 S23: 0.0155 REMARK 3 S31: -0.1222 S32: -0.0513 S33: -0.0063 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 135 THROUGH 163 ) REMARK 3 ORIGIN FOR THE GROUP (A): -57.4367 19.7629 50.7130 REMARK 3 T TENSOR REMARK 3 T11: 0.0650 T22: 0.0843 REMARK 3 T33: 0.1042 T12: -0.0202 REMARK 3 T13: 0.0219 T23: 0.0095 REMARK 3 L TENSOR REMARK 3 L11: 2.0099 L22: 2.1293 REMARK 3 L33: 3.0894 L12: -0.4092 REMARK 3 L13: 0.8683 L23: 0.4108 REMARK 3 S TENSOR REMARK 3 S11: -0.0061 S12: 0.0434 S13: 0.0763 REMARK 3 S21: -0.0475 S22: -0.0217 S23: 0.0365 REMARK 3 S31: -0.1768 S32: -0.0736 S33: 0.0338 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 164 THROUGH 199 ) REMARK 3 ORIGIN FOR THE GROUP (A): -51.7366 19.0210 46.1326 REMARK 3 T TENSOR REMARK 3 T11: 0.0822 T22: 0.1250 REMARK 3 T33: 0.0963 T12: -0.0082 REMARK 3 T13: 0.0106 T23: -0.0053 REMARK 3 L TENSOR REMARK 3 L11: 1.8067 L22: 2.3420 REMARK 3 L33: 2.3722 L12: -0.2459 REMARK 3 L13: 0.5014 L23: -0.3569 REMARK 3 S TENSOR REMARK 3 S11: -0.0053 S12: 0.2182 S13: -0.0544 REMARK 3 S21: -0.1485 S22: -0.0021 S23: -0.0182 REMARK 3 S31: 0.0811 S32: 0.0911 S33: 0.0073 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 200 THROUGH 212 ) REMARK 3 ORIGIN FOR THE GROUP (A): -56.5625 29.4163 39.3237 REMARK 3 T TENSOR REMARK 3 T11: 0.1910 T22: 0.1449 REMARK 3 T33: 0.1781 T12: -0.0045 REMARK 3 T13: -0.0103 T23: 0.0282 REMARK 3 L TENSOR REMARK 3 L11: 2.7484 L22: 7.5532 REMARK 3 L33: 5.9813 L12: -0.7346 REMARK 3 L13: -0.3356 L23: -0.2205 REMARK 3 S TENSOR REMARK 3 S11: 0.0323 S12: 0.2564 S13: 0.2938 REMARK 3 S21: -0.5657 S22: 0.0609 S23: 0.3433 REMARK 3 S31: -0.5534 S32: -0.3153 S33: -0.0611 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6BXD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1000231652. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.88557 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 74681 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 200 DATA REDUNDANCY : 9.500 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 33.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 68.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : 0.47000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3TWI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M (NH4)2SO4, 30% PEG 8K, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 31.51650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.36550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.51650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.36550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 4 REMARK 465 GLY A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 HIS A 11 REMARK 465 GLY A 12 REMARK 465 SER A 13 REMARK 465 GLU A 14 REMARK 465 ASN A 15 REMARK 465 LEU A 16 REMARK 465 TYR A 17 REMARK 465 PHE A 18 REMARK 465 GLN A 19 REMARK 465 GLY A 20 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 134 NZ REMARK 470 ARG A 138 NE CZ NH1 NH2 REMARK 470 GLU A 203 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 59 -160.95 -122.58 REMARK 500 LEU A 72 57.56 -90.09 REMARK 500 ASN A 83 -167.38 -127.81 REMARK 500 ASN A 107 -155.11 -114.93 REMARK 500 LEU A 120 59.55 -96.82 REMARK 500 ASN A 131 -160.25 -128.54 REMARK 500 LYS A 210 36.31 -90.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 666 DISTANCE = 5.84 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ETE A 302 DBREF 6BXD A 4 212 PDB 6BXD 6BXD 4 212 SEQRES 1 A 209 GLY GLY HIS HIS HIS HIS HIS HIS GLY SER GLU ASN LEU SEQRES 2 A 209 TYR PHE GLN GLY ALA CYS PRO SER GLN CYS SER CYS SER SEQRES 3 A 209 GLY THR THR VAL ASP CYS SER GLY LYS SER LEU ALA SER SEQRES 4 A 209 VAL PRO THR GLY ILE PRO THR THR THR GLN VAL LEU GLY SEQRES 5 A 209 LEU SER SER ASN GLN ILE THR LYS LEU GLU PRO GLY VAL SEQRES 6 A 209 PHE ASP SER LEU VAL ASN LEU GLN ILE LEU VAL LEU TYR SEQRES 7 A 209 GLN ASN GLN LEU THR THR LEU PRO ALA GLY VAL PHE ASP SEQRES 8 A 209 ARG LEU ILE ASN LEU LYS GLU LEU TYR PHE SER ASN ASN SEQRES 9 A 209 GLN LEU THR SER LEU PRO ALA GLY VAL PHE ASP LYS LEU SEQRES 10 A 209 THR GLN LEU THR ARG LEU GLU LEU GLN THR ASN GLN LEU SEQRES 11 A 209 LYS SER ILE PRO ARG GLY ALA PHE ASP ASN LEU LYS SER SEQRES 12 A 209 LEU THR ASN ILE TYR LEU PHE ASN ASN PRO TRP ASP CYS SEQRES 13 A 209 GLU CYS SER ASP ILE LEU TYR LEU LYS ASN TRP ILE VAL SEQRES 14 A 209 GLN HIS ALA SER ILE VAL ASN PRO ASP GLY HIS GLY GLY SEQRES 15 A 209 VAL ASP ASN VAL LYS CYS SER GLY THR ASN THR PRO VAL SEQRES 16 A 209 ARG ALA VAL THR GLU ALA SER THR SER PRO SER LYS CYS SEQRES 17 A 209 PRO HET SO4 A 301 5 HET ETE A 302 14 HETNAM SO4 SULFATE ION HETNAM ETE 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL FORMUL 2 SO4 O4 S 2- FORMUL 3 ETE C9 H20 O5 FORMUL 4 HOH *266(H2 O) HELIX 1 AA1 CYS A 161 ASP A 163 5 3 HELIX 2 AA2 ILE A 164 HIS A 174 1 11 HELIX 3 AA3 ALA A 175 VAL A 178 5 4 HELIX 4 AA4 GLY A 184 VAL A 189 5 6 HELIX 5 AA5 PRO A 197 VAL A 201 5 5 HELIX 6 AA6 THR A 202 THR A 206 5 5 SHEET 1 AA1 7 SER A 27 SER A 29 0 SHEET 2 AA1 7 THR A 32 ASP A 34 -1 O ASP A 34 N SER A 27 SHEET 3 AA1 7 VAL A 53 GLY A 55 1 O GLY A 55 N VAL A 33 SHEET 4 AA1 7 ILE A 77 VAL A 79 1 O VAL A 79 N LEU A 54 SHEET 5 AA1 7 GLU A 101 TYR A 103 1 O TYR A 103 N LEU A 78 SHEET 6 AA1 7 ARG A 125 GLU A 127 1 O GLU A 127 N LEU A 102 SHEET 7 AA1 7 ASN A 149 TYR A 151 1 O TYR A 151 N LEU A 126 SSBOND 1 CYS A 22 CYS A 28 1555 1555 2.04 SSBOND 2 CYS A 26 CYS A 35 1555 1555 2.04 SSBOND 3 CYS A 159 CYS A 191 1555 1555 2.07 SSBOND 4 CYS A 161 CYS A 211 1555 1555 2.03 SITE 1 AC1 5 GLY A 30 GLN A 52 GLN A 76 HOH A 403 SITE 2 AC1 5 HOH A 542 SITE 1 AC2 9 ASP A 34 SER A 58 TYR A 103 GLU A 127 SITE 2 AC2 9 GLN A 129 HIS A 183 HOH A 420 HOH A 425 SITE 3 AC2 9 HOH A 508 CRYST1 63.033 74.731 40.840 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015865 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013381 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024486 0.00000