HEADER PROTEIN FIBRIL 25-DEC-17 6BZP TITLE STGGYG FROM LOW-COMPLEXITY DOMAIN OF FUS, RESIDUES 77-82 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA-BINDING PROTEIN FUS; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 77-82; COMPND 5 SYNONYM: FUS, 75 KDA DNA-PAIRING PROTEIN, ONCOGENE FUS, ONCOGENE TLS, COMPND 6 POMP75, TRANSLOCATED IN LIPOSARCOMA PROTEIN; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 4 ORGANISM_COMMON: HUMAN; SOURCE 5 ORGANISM_TAXID: 9606 KEYWDS AMYLOID, LARKS, REVERSIBLE-AMYLOID, LOW-COMPLEXITY, PROTEIN FIBRIL EXPDTA ELECTRON CRYSTALLOGRAPHY AUTHOR M.P.HUGHES,J.A.RODRIGUEZ,M.R.SAWAYA,D.CASCIO,T.GONEN,D.S.EISENBERG REVDAT 6 13-MAR-24 6BZP 1 REMARK REVDAT 5 30-JUN-21 6BZP 1 REMARK REVDAT 4 20-NOV-19 6BZP 1 REMARK REVDAT 3 06-NOV-19 6BZP 1 REMARK REVDAT 2 25-APR-18 6BZP 1 REMARK REVDAT 1 04-APR-18 6BZP 0 JRNL AUTH M.P.HUGHES,M.R.SAWAYA,D.R.BOYER,L.GOLDSCHMIDT,J.A.RODRIGUEZ, JRNL AUTH 2 D.CASCIO,L.CHONG,T.GONEN,D.S.EISENBERG JRNL TITL ATOMIC STRUCTURES OF LOW-COMPLEXITY PROTEIN SEGMENTS REVEAL JRNL TITL 2 KINKED BETA SHEETS THAT ASSEMBLE NETWORKS. JRNL REF SCIENCE V. 359 698 2018 JRNL REFN ESSN 1095-9203 JRNL PMID 29439243 JRNL DOI 10.1126/SCIENCE.AAN6398 REMARK 2 REMARK 2 RESOLUTION. 1.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 13.31 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 3 NUMBER OF REFLECTIONS : 3218 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.010 REMARK 3 FREE R VALUE TEST SET COUNT : 322 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 5 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.10 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.23 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.00 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 850 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2159 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 765 REMARK 3 BIN R VALUE (WORKING SET) : 0.2114 REMARK 3 BIN FREE R VALUE : 0.2545 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 85 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 76 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 11 REMARK 3 SOLVENT ATOMS : 3 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 6.25 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 8.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.91570 REMARK 3 B22 (A**2) : -0.11210 REMARK 3 B33 (A**2) : -0.80360 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.220 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.048 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.051 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.045 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.048 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.916 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 144 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 237 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 30 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 2 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 22 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 144 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 8 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 114 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.013 REMARK 3 BOND ANGLES (DEGREES) : 1.06 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.42 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 8.81 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|1 - 6} REMARK 3 ORIGIN FOR THE GROUP (A): 2.5780 4.1250 4.5859 REMARK 3 T TENSOR REMARK 3 T11: 0.0611 T22: -0.0363 REMARK 3 T33: -0.0309 T12: 0.0039 REMARK 3 T13: 0.0011 T23: -0.0042 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.5190 REMARK 3 L33: 0.0607 L12: 0.1459 REMARK 3 L13: 0.1395 L23: 0.0060 REMARK 3 S TENSOR REMARK 3 S11: 0.0031 S12: -0.0060 S13: -0.0195 REMARK 3 S21: -0.0255 S22: -0.0111 S23: -0.0134 REMARK 3 S31: -0.0103 S32: -0.0013 S33: 0.0080 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {B|1 - 6} REMARK 3 ORIGIN FOR THE GROUP (A): 0.9736 0.2138 15.5476 REMARK 3 T TENSOR REMARK 3 T11: 0.0860 T22: -0.0710 REMARK 3 T33: -0.0180 T12: -0.0181 REMARK 3 T13: 0.0034 T23: 0.0036 REMARK 3 L TENSOR REMARK 3 L11: 0.0954 L22: 0.2326 REMARK 3 L33: 0.0014 L12: -0.1742 REMARK 3 L13: 0.1403 L23: 0.1547 REMARK 3 S TENSOR REMARK 3 S11: 0.0020 S12: 0.0241 S13: 0.0055 REMARK 3 S21: 0.0462 S22: 0.0006 S23: -0.0104 REMARK 3 S31: 0.0076 S32: -0.0190 S33: -0.0026 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6BZP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-JAN-18. REMARK 100 THE DEPOSITION ID IS D_1000231799. REMARK 240 REMARK 240 EXPERIMENTAL DETAILS REMARK 240 RECONSTRUCTION METHOD : CRYSTALLOGRAPHY REMARK 240 SAMPLE TYPE : 3D ARRAY REMARK 240 SPECIMEN TYPE : NULL REMARK 240 DATA ACQUISITION REMARK 240 DATE OF DATA COLLECTION : 18-AUG-15 REMARK 240 TEMPERATURE (KELVIN) : 100.0 REMARK 240 PH : 4.60 REMARK 240 NUMBER OF CRYSTALS USED : NULL REMARK 240 MICROSCOPE MODEL : FEI TECNAI F20 REMARK 240 DETECTOR TYPE : TVIPS TEMCAM-F416 (4K X 4K) REMARK 240 ACCELERATION VOLTAGE (KV) : 200 REMARK 240 NUMBER OF UNIQUE REFLECTIONS : 3220 REMARK 240 RESOLUTION RANGE HIGH (A) : 1.100 REMARK 240 RESOLUTION RANGE LOW (A) : 13.310 REMARK 240 DATA SCALING SOFTWARE : XSCALE REMARK 240 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 240 DATA REDUNDANCY : 7.227 REMARK 240 IN THE HIGHEST RESOLUTION SHELL REMARK 240 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) :1.10 REMARK 240 HIGHEST RESOLUTION SHELL, RANGE LOW (A) :1.13 REMARK 240 COMPLETENESS FOR SHELL (%) : 74.9 REMARK 240 DATA REDUNDANCY IN SHELL : 3.94 REMARK 240 R MERGE FOR SHELL (I) : 0.55300 REMARK 240 METHOD USED TO DETERMINE THE STRUCTURE: AB INITIO PHASING REMARK 240 SOFTWARE USED : NULL REMARK 240 STARTING MODEL : NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 6.89500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.95000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 2.46500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.95000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 6.89500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 2.46500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DECAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 4.93000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 -4.93000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 9.86000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 -9.86000 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 0.00000 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues TOE B 101 and TOE B REMARK 800 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues TOE B 101 and TOE B REMARK 800 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues TOE B 101 and TOE B REMARK 800 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues TOE B 101 and TOE B REMARK 800 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues TOE B 101 and TOE B REMARK 800 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues TOE B 101 and TOE B REMARK 800 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues TOE B 101 and TOE B REMARK 800 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues TOE B 101 and TOE B REMARK 800 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues TOE B 101 and TOE B REMARK 800 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues TOE B 101 and TOE B REMARK 800 101 DBREF 6BZP A 1 6 UNP P35637 FUS_HUMAN 77 82 DBREF 6BZP B 1 6 UNP P35637 FUS_HUMAN 77 82 SEQRES 1 A 6 SER THR GLY GLY TYR GLY SEQRES 1 B 6 SER THR GLY GLY TYR GLY HET TOE B 101 11 HETNAM TOE 2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL FORMUL 3 TOE C7 H16 O4 FORMUL 4 HOH *3(H2 O) SITE 1 AC1 2 GLY B 3 GLY B 4 SITE 1 AC2 2 GLY B 3 GLY B 4 SITE 1 AC3 2 GLY B 3 GLY B 4 SITE 1 AC4 2 GLY B 3 GLY B 4 SITE 1 AC5 2 GLY B 3 GLY B 4 SITE 1 AC6 2 GLY B 3 GLY B 4 SITE 1 AC7 2 GLY B 3 GLY B 4 SITE 1 AC8 2 GLY B 3 GLY B 4 SITE 1 AC9 2 GLY B 3 GLY B 4 SITE 1 AD1 2 GLY B 3 GLY B 4 CRYST1 13.790 4.930 101.900 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.072516 0.000000 0.000000 0.00000 SCALE2 0.000000 0.202840 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009814 0.00000