HEADER IMMUNE SYSTEM, SUGAR BINDING PROTEIN 16-JAN-18 6C5H TITLE S25-5 FAB IN COMPLEX WITH CHLAMYDIACEAE-SPECIFIC LPS ANTIGEN COMPND MOL_ID: 1; COMPND 2 MOLECULE: FAB HEAVY CHAIN (IGG1); COMPND 3 CHAIN: H; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: FAB LIGHT CHAIN (IGG1 KAPPA); COMPND 6 CHAIN: L SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 7 ORGANISM_COMMON: MOUSE; SOURCE 8 ORGANISM_TAXID: 10090 KEYWDS COMPLEX, LIPOPOLYSACCHARIDE, ANTIBODY, ANTIGEN, CHLAMYDIA, SUGAR KEYWDS 2 BINDING PROTEIN, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR S.V.EVANS,O.HAJI-GHASSEMI REVDAT 5 04-OCT-23 6C5H 1 HETSYN LINK REVDAT 4 29-JUL-20 6C5H 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 08-JAN-20 6C5H 1 SEQRES REVDAT 2 27-FEB-19 6C5H 1 JRNL REVDAT 1 09-JAN-19 6C5H 0 JRNL AUTH O.HAJI-GHASSEMI,S.MULLER-LOENNIES,C.L.BROOKS,C.R.MACKENZIE, JRNL AUTH 2 N.CAVENEY,F.VAN PETEGEM,L.BRADE,P.KOSMA,H.BRADE,S.V.EVANS JRNL TITL SUBTLE CHANGES IN THE COMBINING SITE OF THE JRNL TITL 2 CHLAMYDIACEAE-SPECIFIC MAB S25-23 INCREASE THE JRNL TITL 3 ANTIBODY-CARBOHYDRATE BINDING AFFINITY BY AN ORDER OF JRNL TITL 4 MAGNITUDE. JRNL REF BIOCHEMISTRY V. 58 714 2019 JRNL REFN ISSN 1520-4995 JRNL PMID 30571096 JRNL DOI 10.1021/ACS.BIOCHEM.8B00318 REMARK 2 REMARK 2 RESOLUTION. 1.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0155 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 29969 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1571 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.99 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.04 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1985 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.2460 REMARK 3 BIN FREE R VALUE SET COUNT : 101 REMARK 3 BIN FREE R VALUE : 0.2910 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3296 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 139 REMARK 3 SOLVENT ATOMS : 303 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.30000 REMARK 3 B22 (A**2) : -0.10000 REMARK 3 B33 (A**2) : -0.20000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.189 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.162 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.119 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.321 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3526 ; 0.009 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 3205 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4809 ; 1.498 ; 1.984 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7442 ; 1.028 ; 3.009 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 426 ; 6.859 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 130 ;33.569 ;24.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 532 ;13.702 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;15.648 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 559 ; 0.135 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3807 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 764 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 4 REMARK 4 6C5H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JAN-18. REMARK 100 THE DEPOSITION ID IS D_1000232056. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31788 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.990 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 8.200 REMARK 200 R MERGE (I) : 0.12500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.99 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.20 REMARK 200 R MERGE FOR SHELL (I) : 0.73300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4M7J REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS HCL 25% [W/V] REMARK 280 POLYETHYLENE GLYCOL [PEG] 3350, PH 6.5, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 289.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.71400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.71400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 26.07300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 64.47850 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 26.07300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 64.47850 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 67.71400 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 26.07300 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 64.47850 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 67.71400 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 26.07300 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 64.47850 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL L 301 LIES ON A SPECIAL POSITION. REMARK 375 HOH H 542 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA H 129 REMARK 465 ALA H 130 REMARK 465 GLN H 131 REMARK 465 THR H 132 REMARK 465 ASN H 133 REMARK 465 ASN L 212 REMARK 465 GLU L 213 REMARK 465 CYS L 214 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER H 15 -11.41 74.67 REMARK 500 PHE H 100B 35.37 -96.15 REMARK 500 LYS L 50 54.32 37.05 REMARK 500 VAL L 51 -54.75 76.71 REMARK 500 REMARK 500 REMARK: NULL DBREF 6C5H H 1 100A PDB 6C5H 6C5H 1 100 DBREF 6C5H H 100B 213 UNP Q99LC4 Q99LC4_MOUSE 126 239 DBREF 6C5H L 1 96 PDB 6C5H 6C5H 1 96 DBREF1 6C5H L 97 214 UNP A0A0F7R5U8_MOUSE DBREF2 6C5H L A0A0F7R5U8 122 239 SEQRES 1 H 218 PCA VAL GLN LEU VAL GLU SER GLY PRO GLY LEU VAL GLN SEQRES 2 H 218 PRO SER GLN SER LEU SER ILE THR CYS THR VAL SER GLY SEQRES 3 H 218 PHE SER LEU SER THR TYR GLY VAL HIS TRP VAL ARG GLN SEQRES 4 H 218 SER PRO GLY LYS GLY LEU GLU TRP LEU GLY VAL ILE TRP SEQRES 5 H 218 SER GLY GLY SER THR ASP TYR ASN ALA ALA PHE ILE SER SEQRES 6 H 218 ARG LEU SER ILE THR LYS ASP ASN SER LYS SER GLN VAL SEQRES 7 H 218 PHE PHE LYS MET ASN SER LEU GLN PRO ASN ASP THR ALA SEQRES 8 H 218 VAL TYR TYR CYS ASP ARG MET ARG ILE THR THR ASP TRP SEQRES 9 H 218 PHE ALA TYR TRP GLY GLN GLY THR LEU VAL THR VAL SER SEQRES 10 H 218 ALA ALA LYS THR THR PRO PRO SER VAL TYR PRO LEU ALA SEQRES 11 H 218 PRO GLY SER ALA ALA GLN THR ASN SER MET VAL THR LEU SEQRES 12 H 218 GLY CYS LEU VAL LYS GLY TYR PHE PRO GLU PRO VAL THR SEQRES 13 H 218 VAL THR TRP ASN SER GLY SER LEU SER SER GLY VAL HIS SEQRES 14 H 218 THR PHE PRO ALA VAL LEU GLN SER ASP LEU TYR THR LEU SEQRES 15 H 218 SER SER SER VAL THR VAL PRO SER SER THR TRP PRO SER SEQRES 16 H 218 GLU THR VAL THR CYS ASN VAL ALA HIS PRO ALA SER SER SEQRES 17 H 218 THR LYS VAL ASP LYS LYS ILE VAL PRO ARG SEQRES 1 L 219 ASP VAL LEU MET THR GLN SER PRO LEU SER LEU PRO VAL SEQRES 2 L 219 SER LEU GLY ASP GLN ALA SER ILE SER CYS ARG SER SER SEQRES 3 L 219 GLN THR ILE VAL HIS SER ASN GLY ASN THR TYR LEU GLU SEQRES 4 L 219 TRP TYR LEU GLN LYS PRO GLY GLN SER PRO LYS LEU LEU SEQRES 5 L 219 ILE TYR LYS VAL SER ASN ARG PHE TYR GLY VAL PRO ASP SEQRES 6 L 219 ARG PHE SER GLY SER GLY SER GLY THR ASP PHE THR LEU SEQRES 7 L 219 LYS ILE SER ARG VAL GLU ALA GLU ASP LEU GLY VAL TYR SEQRES 8 L 219 TYR CYS PHE GLN GLY SER HIS VAL PRO TYR THR PHE GLY SEQRES 9 L 219 GLY GLY THR LYS LEU GLU ILE LYS ARG ALA ASP ALA ALA SEQRES 10 L 219 PRO THR VAL SER ILE PHE PRO PRO SER SER GLU GLN LEU SEQRES 11 L 219 THR SER GLY GLY ALA SER VAL VAL CYS PHE LEU ASN ASN SEQRES 12 L 219 PHE TYR PRO LYS ASP ILE ASN VAL LYS TRP LYS ILE ASP SEQRES 13 L 219 GLY SER GLU ARG GLN ASN GLY VAL LEU ASN SER TRP THR SEQRES 14 L 219 ASP GLN ASP SER LYS ASP SER THR TYR SER MET SER SER SEQRES 15 L 219 THR LEU THR LEU THR LYS ASP GLU TYR GLU ARG HIS ASN SEQRES 16 L 219 SER TYR THR CYS GLU ALA THR HIS LYS THR SER THR SER SEQRES 17 L 219 PRO ILE VAL LYS SER PHE ASN ARG ASN GLU CYS HET PCA H 1 8 HET NAG A 1 14 HET FUC A 2 10 HET GP1 B 1 16 HET Z9M B 2 15 HET KDO B 3 15 HET KDO B 4 15 HET KDO B 5 15 HET PG4 H 403 13 HET PEG H 404 7 HET PEG H 405 7 HET TAM H 406 11 HET CL L 301 1 HETNAM PCA PYROGLUTAMIC ACID HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM GP1 2-AMINO-2-DEOXY-1-O-PHOSPHONO-ALPHA-D-GLUCOPYRANOSE HETNAM Z9M 2-AMINO-2-DEOXY-4-O-PHOSPHONO-BETA-D-GLUCOPYRANOSE HETNAM KDO 3-DEOXY-ALPHA-D-MANNO-OCT-2-ULOPYRANOSONIC ACID HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM TAM TRIS(HYDROXYETHYL)AMINOMETHANE HETNAM CL CHLORIDE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN GP1 GLUCOSAMINE 1-PHOSPHATE; 1-O-PHOSPHONO-ALPHA-D- HETSYN 2 GP1 GLUCOSAMINE; 2-AMINO-2-DEOXY-1-O-PHOSPHONO-ALPHA-D- HETSYN 3 GP1 GLUCOSE; 2-AMINO-2-DEOXY-1-O-PHOSPHONO-D-GLUCOSE; 2- HETSYN 4 GP1 AMINO-2-DEOXY-1-O-PHOSPHONO-GLUCOSE HETSYN Z9M 4-O-PHOSPHONO-BETA-D-GLUCOSAMINE; 2-AMINO-2-DEOXY-4-O- HETSYN 2 Z9M PHOSPHONO-BETA-D-GLUCOSE; 2-AMINO-2-DEOXY-4-O- HETSYN 3 Z9M PHOSPHONO-D-GLUCOSE; 2-AMINO-2-DEOXY-4-O-PHOSPHONO- HETSYN 4 Z9M GLUCOSE HETSYN KDO 3-DEOXY-D-MANNO-OCT-2-ULOPYRANOSONIC ACID; 2-KETO-3- HETSYN 2 KDO DEOXY-D-MANNOOCTANOIC ACID; 3-DEOXY-ALPHA-D-MANNO-OCT- HETSYN 3 KDO 2-ULOSONIC ACID; 3-DEOXY-D-MANNO-OCT-2-ULOSONIC ACID; HETSYN 4 KDO 3-DEOXY-MANNO-OCT-2-ULOSONIC ACID FORMUL 1 PCA C5 H7 N O3 FORMUL 3 NAG C8 H15 N O6 FORMUL 3 FUC C6 H12 O5 FORMUL 4 GP1 C6 H14 N O8 P FORMUL 4 Z9M C6 H14 N O8 P FORMUL 4 KDO 3(C8 H14 O8) FORMUL 5 PG4 C8 H18 O5 FORMUL 6 PEG 2(C4 H10 O3) FORMUL 8 TAM C7 H17 N O3 FORMUL 9 CL CL 1- FORMUL 10 HOH *303(H2 O) HELIX 1 AA1 PHE H 63 SER H 65 5 3 HELIX 2 AA2 GLN H 83 THR H 87 5 5 HELIX 3 AA3 SER H 156 SER H 158 5 3 HELIX 4 AA4 SER H 186 TRP H 188 5 3 HELIX 5 AA5 PRO H 200 SER H 203 5 4 HELIX 6 AA6 GLU L 79 LEU L 83 5 5 HELIX 7 AA7 SER L 121 SER L 127 1 7 HELIX 8 AA8 LYS L 183 GLU L 187 1 5 SHEET 1 AA1 4 GLN H 3 SER H 7 0 SHEET 2 AA1 4 LEU H 18 SER H 25 -1 O THR H 23 N VAL H 5 SHEET 3 AA1 4 GLN H 77 MET H 82 -1 O MET H 82 N LEU H 18 SHEET 4 AA1 4 LEU H 67 ASP H 72 -1 N THR H 70 O PHE H 79 SHEET 1 AA2 6 LEU H 11 VAL H 12 0 SHEET 2 AA2 6 THR H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 AA2 6 ALA H 88 ASP H 93 -1 N ALA H 88 O VAL H 109 SHEET 4 AA2 6 VAL H 34 SER H 40 -1 N VAL H 37 O TYR H 91 SHEET 5 AA2 6 GLY H 44 ILE H 51 -1 O LEU H 48 N TRP H 36 SHEET 6 AA2 6 THR H 57 TYR H 59 -1 O ASP H 58 N VAL H 50 SHEET 1 AA3 4 SER H 120 LEU H 124 0 SHEET 2 AA3 4 MET H 135 TYR H 145 -1 O LYS H 143 N SER H 120 SHEET 3 AA3 4 LEU H 174 PRO H 184 -1 O VAL H 183 N VAL H 136 SHEET 4 AA3 4 VAL H 163 THR H 165 -1 N HIS H 164 O SER H 180 SHEET 1 AA4 4 SER H 120 LEU H 124 0 SHEET 2 AA4 4 MET H 135 TYR H 145 -1 O LYS H 143 N SER H 120 SHEET 3 AA4 4 LEU H 174 PRO H 184 -1 O VAL H 183 N VAL H 136 SHEET 4 AA4 4 VAL H 169 GLN H 171 -1 N GLN H 171 O LEU H 174 SHEET 1 AA5 3 THR H 151 TRP H 154 0 SHEET 2 AA5 3 THR H 194 HIS H 199 -1 O ASN H 196 N THR H 153 SHEET 3 AA5 3 THR H 204 LYS H 209 -1 O VAL H 206 N VAL H 197 SHEET 1 AA6 4 MET L 4 SER L 7 0 SHEET 2 AA6 4 ALA L 19 SER L 25 -1 O SER L 22 N SER L 7 SHEET 3 AA6 4 ASP L 70 ILE L 75 -1 O ILE L 75 N ALA L 19 SHEET 4 AA6 4 PHE L 62 SER L 67 -1 N SER L 63 O LYS L 74 SHEET 1 AA7 6 SER L 10 SER L 14 0 SHEET 2 AA7 6 THR L 102 LYS L 107 1 O LYS L 107 N VAL L 13 SHEET 3 AA7 6 GLY L 84 GLN L 90 -1 N GLY L 84 O LEU L 104 SHEET 4 AA7 6 LEU L 33 GLN L 38 -1 N TYR L 36 O TYR L 87 SHEET 5 AA7 6 LYS L 45 TYR L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 AA7 6 ASN L 53 ARG L 54 -1 O ASN L 53 N TYR L 49 SHEET 1 AA8 4 SER L 10 SER L 14 0 SHEET 2 AA8 4 THR L 102 LYS L 107 1 O LYS L 107 N VAL L 13 SHEET 3 AA8 4 GLY L 84 GLN L 90 -1 N GLY L 84 O LEU L 104 SHEET 4 AA8 4 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 AA9 4 THR L 114 PHE L 118 0 SHEET 2 AA9 4 GLY L 129 PHE L 139 -1 O ASN L 137 N THR L 114 SHEET 3 AA9 4 TYR L 173 THR L 182 -1 O LEU L 181 N ALA L 130 SHEET 4 AA9 4 VAL L 159 TRP L 163 -1 N SER L 162 O SER L 176 SHEET 1 AB1 4 SER L 153 GLU L 154 0 SHEET 2 AB1 4 ILE L 144 ILE L 150 -1 N ILE L 150 O SER L 153 SHEET 3 AB1 4 SER L 191 HIS L 198 -1 O GLU L 195 N LYS L 147 SHEET 4 AB1 4 SER L 201 ASN L 210 -1 O ILE L 205 N ALA L 196 SSBOND 1 CYS H 22 CYS H 92 1555 1555 2.10 SSBOND 2 CYS H 140 CYS H 195 1555 1555 2.03 SSBOND 3 CYS L 23 CYS L 88 1555 1555 2.14 SSBOND 4 CYS L 134 CYS L 194 1555 1555 2.03 LINK C PCA H 1 N VAL H 2 1555 1555 1.33 LINK ND2 ASN H 85 C1 NAG A 1 1555 1555 1.44 LINK O6 NAG A 1 C1 FUC A 2 1555 1555 1.44 LINK O6 GP1 B 1 C1 Z9M B 2 1555 1555 1.45 LINK O6 Z9M B 2 C2 KDO B 3 1555 1555 1.44 LINK O4 KDO B 3 C2 KDO B 4 1555 1555 1.47 LINK O8 KDO B 4 C2 KDO B 5 1555 1555 1.42 CISPEP 1 PHE H 146 PRO H 147 0 -9.47 CISPEP 2 GLU H 148 PRO H 149 0 6.68 CISPEP 3 TRP H 188 PRO H 189 0 9.69 CISPEP 4 SER L 7 PRO L 8 0 -4.99 CISPEP 5 VAL L 94 PRO L 95 0 1.93 CISPEP 6 TYR L 140 PRO L 141 0 1.17 CRYST1 52.146 128.957 135.428 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019177 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007755 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007384 0.00000 HETATM 1 N PCA H 1 2.847 2.133 15.581 1.00 54.87 N HETATM 2 CA PCA H 1 3.976 3.048 15.459 1.00 53.46 C HETATM 3 CB PCA H 1 4.297 3.064 13.962 1.00 54.98 C HETATM 4 CG PCA H 1 3.128 2.370 13.269 1.00 56.25 C HETATM 5 CD PCA H 1 2.289 1.851 14.411 1.00 55.03 C HETATM 6 OE PCA H 1 1.233 1.262 14.248 1.00 57.18 O HETATM 7 C PCA H 1 3.729 4.457 15.923 1.00 50.49 C HETATM 8 O PCA H 1 2.586 4.860 16.175 1.00 49.59 O