HEADER TRANSFERASE/TRANSFERASE INHIBITOR 28-JAN-18 6C9R TITLE MYCOBACTERIUM TUBERCULOSIS ADENOSINE KINASE BOUND TO (2R,3S,4R,5R)-2- TITLE 2 (HYDROXYMETHYL)-5-(6-(THIOPHEN-3-YL)-9H-PURIN-9-YL)TETRAHYDROFURAN-3, TITLE 3 4-DIOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENOSINE KINASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: AK; COMPND 5 EC: 2.7.1.20; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: ADOK, CBHK, MRA_2218; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEOSIDE ANALOG, COMPLEX, INHIBITOR, STRUCTURAL GENOMICS, PSI-2, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, TB STRUCTURAL GENOMICS CONSORTIUM, KEYWDS 3 TBSGC, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR R.A.CRESPO,TB STRUCTURAL GENOMICS CONSORTIUM (TBSGC) REVDAT 4 04-OCT-23 6C9R 1 REMARK REVDAT 3 18-DEC-19 6C9R 1 REMARK REVDAT 2 22-MAY-19 6C9R 1 JRNL REVDAT 1 01-MAY-19 6C9R 0 JRNL AUTH R.A.CRESPO,Q.DANG,N.E.ZHOU,L.M.GUTHRIE,T.C.SNAVELY,W.DONG, JRNL AUTH 2 K.A.LOESCH,T.SUZUKI,L.YOU,W.WANG,T.O'MALLEY,T.PARISH, JRNL AUTH 3 D.B.OLSEN,J.C.SACCHETTINI JRNL TITL STRUCTURE-GUIDED DRUG DESIGN OF 6-SUBSTITUTED ADENOSINE JRNL TITL 2 ANALOGUES AS POTENT INHIBITORS OF MYCOBACTERIUM TUBERCULOSIS JRNL TITL 3 ADENOSINE KINASE. JRNL REF J.MED.CHEM. V. 62 4483 2019 JRNL REFN ISSN 0022-2623 JRNL PMID 31002508 JRNL DOI 10.1021/ACS.JMEDCHEM.9B00020 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.38 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 57558 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 2942 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.4179 - 5.7966 1.00 2799 156 0.2108 0.2108 REMARK 3 2 5.7966 - 4.6024 1.00 2703 139 0.1595 0.1554 REMARK 3 3 4.6024 - 4.0210 1.00 2658 142 0.1404 0.1610 REMARK 3 4 4.0210 - 3.6535 1.00 2668 111 0.1527 0.1745 REMARK 3 5 3.6535 - 3.3918 1.00 2610 142 0.1676 0.2048 REMARK 3 6 3.3918 - 3.1918 1.00 2620 146 0.1860 0.2061 REMARK 3 7 3.1918 - 3.0320 1.00 2595 139 0.1944 0.2355 REMARK 3 8 3.0320 - 2.9001 1.00 2605 151 0.2001 0.2303 REMARK 3 9 2.9001 - 2.7884 1.00 2563 154 0.2016 0.2156 REMARK 3 10 2.7884 - 2.6922 1.00 2600 144 0.1953 0.2177 REMARK 3 11 2.6922 - 2.6081 1.00 2584 145 0.1952 0.2306 REMARK 3 12 2.6081 - 2.5335 1.00 2573 143 0.1874 0.2072 REMARK 3 13 2.5335 - 2.4668 1.00 2574 146 0.1857 0.2177 REMARK 3 14 2.4668 - 2.4066 1.00 2572 151 0.1879 0.2283 REMARK 3 15 2.4066 - 2.3519 1.00 2564 134 0.1910 0.2027 REMARK 3 16 2.3519 - 2.3019 1.00 2588 146 0.1950 0.2765 REMARK 3 17 2.3019 - 2.2558 1.00 2555 137 0.2018 0.2490 REMARK 3 18 2.2558 - 2.2133 1.00 2580 133 0.1971 0.2564 REMARK 3 19 2.2133 - 2.1737 1.00 2602 118 0.1956 0.2336 REMARK 3 20 2.1737 - 2.1369 1.00 2560 136 0.1964 0.2510 REMARK 3 21 2.1369 - 2.1024 0.96 2443 129 0.2168 0.2379 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.620 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5245 REMARK 3 ANGLE : 0.781 7135 REMARK 3 CHIRALITY : 0.051 814 REMARK 3 PLANARITY : 0.005 924 REMARK 3 DIHEDRAL : 14.277 3022 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6C9R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JAN-18. REMARK 100 THE DEPOSITION ID IS D_1000232368. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JUN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03320 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL CRYO-COOLED REMARK 200 SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57583 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.102 REMARK 200 RESOLUTION RANGE LOW (A) : 44.380 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.05875 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.8900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.31480 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.430 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2PKM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5.0 M SODIUM FORMATE, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.61800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 79.16500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.99200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 79.16500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.61800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.99200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH22 ARG B 160 O ARG B 184 1.57 REMARK 500 O HOH B 553 O HOH B 628 1.84 REMARK 500 OG SER B 94 OE2 GLU B 123 2.15 REMARK 500 O HOH B 510 O HOH B 531 2.15 REMARK 500 O HOH A 589 O HOH A 612 2.16 REMARK 500 O HOH B 594 O HOH B 605 2.16 REMARK 500 O HOH A 631 O HOH A 633 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 1 16.27 -145.30 REMARK 500 ALA A 100 155.48 -47.86 REMARK 500 SER A 171 -114.86 40.25 REMARK 500 ASP A 251 116.63 -163.47 REMARK 500 ALA B 100 155.22 -47.70 REMARK 500 SER B 171 -118.23 43.19 REMARK 500 ASP B 251 114.53 -161.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 631 DISTANCE = 6.07 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 ERJ A 402 REMARK 610 ERJ B 402 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 403 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 251 O REMARK 620 2 VAL A 287 O 81.6 REMARK 620 3 SER A 290 O 100.7 82.5 REMARK 620 4 GLY A 292 O 160.0 115.2 92.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 403 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 251 O REMARK 620 2 VAL B 287 O 83.9 REMARK 620 3 SER B 290 O 99.6 76.9 REMARK 620 4 GLY B 292 O 167.1 108.0 88.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ERJ A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ERJ A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ERJ B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ERJ B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 404 DBREF 6C9R A 1 324 UNP A5U4N0 ADOK_MYCTA 1 324 DBREF 6C9R B 1 324 UNP A5U4N0 ADOK_MYCTA 1 324 SEQADV 6C9R GLY A -12 UNP A5U4N0 EXPRESSION TAG SEQADV 6C9R LEU A -11 UNP A5U4N0 EXPRESSION TAG SEQADV 6C9R GLN A -10 UNP A5U4N0 EXPRESSION TAG SEQADV 6C9R GLY A -9 UNP A5U4N0 EXPRESSION TAG SEQADV 6C9R THR A -8 UNP A5U4N0 EXPRESSION TAG SEQADV 6C9R GLU A -7 UNP A5U4N0 EXPRESSION TAG SEQADV 6C9R ASN A -6 UNP A5U4N0 EXPRESSION TAG SEQADV 6C9R LEU A -5 UNP A5U4N0 EXPRESSION TAG SEQADV 6C9R TYR A -4 UNP A5U4N0 EXPRESSION TAG SEQADV 6C9R PHE A -3 UNP A5U4N0 EXPRESSION TAG SEQADV 6C9R GLN A -2 UNP A5U4N0 EXPRESSION TAG SEQADV 6C9R SER A -1 UNP A5U4N0 EXPRESSION TAG SEQADV 6C9R HIS A 0 UNP A5U4N0 EXPRESSION TAG SEQADV 6C9R GLY B -12 UNP A5U4N0 EXPRESSION TAG SEQADV 6C9R LEU B -11 UNP A5U4N0 EXPRESSION TAG SEQADV 6C9R GLN B -10 UNP A5U4N0 EXPRESSION TAG SEQADV 6C9R GLY B -9 UNP A5U4N0 EXPRESSION TAG SEQADV 6C9R THR B -8 UNP A5U4N0 EXPRESSION TAG SEQADV 6C9R GLU B -7 UNP A5U4N0 EXPRESSION TAG SEQADV 6C9R ASN B -6 UNP A5U4N0 EXPRESSION TAG SEQADV 6C9R LEU B -5 UNP A5U4N0 EXPRESSION TAG SEQADV 6C9R TYR B -4 UNP A5U4N0 EXPRESSION TAG SEQADV 6C9R PHE B -3 UNP A5U4N0 EXPRESSION TAG SEQADV 6C9R GLN B -2 UNP A5U4N0 EXPRESSION TAG SEQADV 6C9R SER B -1 UNP A5U4N0 EXPRESSION TAG SEQADV 6C9R HIS B 0 UNP A5U4N0 EXPRESSION TAG SEQRES 1 A 337 GLY LEU GLN GLY THR GLU ASN LEU TYR PHE GLN SER HIS SEQRES 2 A 337 MET THR ILE ALA VAL THR GLY SER ILE ALA THR ASP HIS SEQRES 3 A 337 LEU MET ARG PHE PRO GLY ARG PHE SER GLU GLN LEU LEU SEQRES 4 A 337 PRO GLU HIS LEU HIS LYS VAL SER LEU SER PHE LEU VAL SEQRES 5 A 337 ASP ASP LEU VAL MET HIS ARG GLY GLY VAL ALA GLY ASN SEQRES 6 A 337 MET ALA PHE ALA ILE GLY VAL LEU GLY GLY GLU VAL ALA SEQRES 7 A 337 LEU VAL GLY ALA ALA GLY ALA ASP PHE ALA ASP TYR ARG SEQRES 8 A 337 ASP TRP LEU LYS ALA ARG GLY VAL ASN CYS ASP HIS VAL SEQRES 9 A 337 LEU ILE SER GLU THR ALA HIS THR ALA ARG PHE THR CYS SEQRES 10 A 337 THR THR ASP VAL ASP MET ALA GLN ILE ALA SER PHE TYR SEQRES 11 A 337 PRO GLY ALA MET SER GLU ALA ARG ASN ILE LYS LEU ALA SEQRES 12 A 337 ASP VAL VAL SER ALA ILE GLY LYS PRO GLU LEU VAL ILE SEQRES 13 A 337 ILE GLY ALA ASN ASP PRO GLU ALA MET PHE LEU HIS THR SEQRES 14 A 337 GLU GLU CYS ARG LYS LEU GLY LEU ALA PHE ALA ALA ASP SEQRES 15 A 337 PRO SER GLN GLN LEU ALA ARG LEU SER GLY GLU GLU ILE SEQRES 16 A 337 ARG ARG LEU VAL ASN GLY ALA ALA TYR LEU PHE THR ASN SEQRES 17 A 337 ASP TYR GLU TRP ASP LEU LEU LEU SER LYS THR GLY TRP SEQRES 18 A 337 SER GLU ALA ASP VAL MET ALA GLN ILE ASP LEU ARG VAL SEQRES 19 A 337 THR THR LEU GLY PRO LYS GLY VAL ASP LEU VAL GLU PRO SEQRES 20 A 337 ASP GLY THR THR ILE HIS VAL GLY VAL VAL PRO GLU THR SEQRES 21 A 337 SER GLN THR ASP PRO THR GLY VAL GLY ASP ALA PHE ARG SEQRES 22 A 337 ALA GLY PHE LEU THR GLY ARG SER ALA GLY LEU GLY LEU SEQRES 23 A 337 GLU ARG SER ALA GLN LEU GLY SER LEU VAL ALA VAL LEU SEQRES 24 A 337 VAL LEU GLU SER THR GLY THR GLN GLU TRP GLN TRP ASP SEQRES 25 A 337 TYR GLU ALA ALA ALA SER ARG LEU ALA GLY ALA TYR GLY SEQRES 26 A 337 GLU HIS ALA ALA ALA GLU ILE VAL ALA VAL LEU ALA SEQRES 1 B 337 GLY LEU GLN GLY THR GLU ASN LEU TYR PHE GLN SER HIS SEQRES 2 B 337 MET THR ILE ALA VAL THR GLY SER ILE ALA THR ASP HIS SEQRES 3 B 337 LEU MET ARG PHE PRO GLY ARG PHE SER GLU GLN LEU LEU SEQRES 4 B 337 PRO GLU HIS LEU HIS LYS VAL SER LEU SER PHE LEU VAL SEQRES 5 B 337 ASP ASP LEU VAL MET HIS ARG GLY GLY VAL ALA GLY ASN SEQRES 6 B 337 MET ALA PHE ALA ILE GLY VAL LEU GLY GLY GLU VAL ALA SEQRES 7 B 337 LEU VAL GLY ALA ALA GLY ALA ASP PHE ALA ASP TYR ARG SEQRES 8 B 337 ASP TRP LEU LYS ALA ARG GLY VAL ASN CYS ASP HIS VAL SEQRES 9 B 337 LEU ILE SER GLU THR ALA HIS THR ALA ARG PHE THR CYS SEQRES 10 B 337 THR THR ASP VAL ASP MET ALA GLN ILE ALA SER PHE TYR SEQRES 11 B 337 PRO GLY ALA MET SER GLU ALA ARG ASN ILE LYS LEU ALA SEQRES 12 B 337 ASP VAL VAL SER ALA ILE GLY LYS PRO GLU LEU VAL ILE SEQRES 13 B 337 ILE GLY ALA ASN ASP PRO GLU ALA MET PHE LEU HIS THR SEQRES 14 B 337 GLU GLU CYS ARG LYS LEU GLY LEU ALA PHE ALA ALA ASP SEQRES 15 B 337 PRO SER GLN GLN LEU ALA ARG LEU SER GLY GLU GLU ILE SEQRES 16 B 337 ARG ARG LEU VAL ASN GLY ALA ALA TYR LEU PHE THR ASN SEQRES 17 B 337 ASP TYR GLU TRP ASP LEU LEU LEU SER LYS THR GLY TRP SEQRES 18 B 337 SER GLU ALA ASP VAL MET ALA GLN ILE ASP LEU ARG VAL SEQRES 19 B 337 THR THR LEU GLY PRO LYS GLY VAL ASP LEU VAL GLU PRO SEQRES 20 B 337 ASP GLY THR THR ILE HIS VAL GLY VAL VAL PRO GLU THR SEQRES 21 B 337 SER GLN THR ASP PRO THR GLY VAL GLY ASP ALA PHE ARG SEQRES 22 B 337 ALA GLY PHE LEU THR GLY ARG SER ALA GLY LEU GLY LEU SEQRES 23 B 337 GLU ARG SER ALA GLN LEU GLY SER LEU VAL ALA VAL LEU SEQRES 24 B 337 VAL LEU GLU SER THR GLY THR GLN GLU TRP GLN TRP ASP SEQRES 25 B 337 TYR GLU ALA ALA ALA SER ARG LEU ALA GLY ALA TYR GLY SEQRES 26 B 337 GLU HIS ALA ALA ALA GLU ILE VAL ALA VAL LEU ALA HET ERJ A 401 23 HET ERJ A 402 14 HET NA A 403 1 HET ERJ B 401 23 HET ERJ B 402 14 HET NA B 403 1 HET GOL B 404 6 HETNAM ERJ 9-BETA-D-RIBOFURANOSYL-6-(THIOPHEN-3-YL)-9H-PURINE HETNAM NA SODIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 ERJ 4(C14 H14 N4 O4 S) FORMUL 5 NA 2(NA 1+) FORMUL 9 GOL C3 H8 O3 FORMUL 10 HOH *276(H2 O) HELIX 1 AA1 GLY A -9 HIS A 0 1 10 HELIX 2 AA2 PHE A 21 GLN A 24 1 4 HELIX 3 AA3 PRO A 27 HIS A 31 5 5 HELIX 4 AA4 VAL A 49 VAL A 59 1 11 HELIX 5 AA5 ALA A 72 ARG A 84 5 13 HELIX 6 AA6 GLY A 119 ASN A 126 5 8 HELIX 7 AA7 LEU A 129 ILE A 136 1 8 HELIX 8 AA8 PRO A 149 LEU A 162 1 14 HELIX 9 AB1 SER A 171 ARG A 176 5 6 HELIX 10 AB2 GLY A 179 VAL A 186 1 8 HELIX 11 AB3 ASP A 196 THR A 206 1 11 HELIX 12 AB4 GLU A 210 MET A 214 1 5 HELIX 13 AB5 GLY A 225 LYS A 227 5 3 HELIX 14 AB6 VAL A 255 ALA A 269 1 15 HELIX 15 AB7 LEU A 273 LEU A 288 1 16 HELIX 16 AB8 TYR A 300 TYR A 311 1 12 HELIX 17 AB9 GLU A 313 LEU A 323 1 11 HELIX 18 AC1 GLY B -9 HIS B 0 1 10 HELIX 19 AC2 PHE B 21 GLN B 24 1 4 HELIX 20 AC3 PRO B 27 HIS B 31 5 5 HELIX 21 AC4 VAL B 49 VAL B 59 1 11 HELIX 22 AC5 ALA B 72 ARG B 84 5 13 HELIX 23 AC7 GLY B 119 ASN B 126 5 8 HELIX 24 AC8 LEU B 129 ILE B 136 1 8 HELIX 25 AC9 PRO B 149 LEU B 162 1 14 HELIX 26 AD1 SER B 171 ARG B 176 5 6 HELIX 27 AD2 GLY B 179 VAL B 186 1 8 HELIX 28 AD3 ASP B 196 THR B 206 1 11 HELIX 29 AD4 GLU B 210 MET B 214 1 5 HELIX 30 AD5 GLY B 225 LYS B 227 5 3 HELIX 31 AD6 VAL B 255 ALA B 269 1 15 HELIX 32 AD7 LEU B 273 LEU B 288 1 16 HELIX 33 AD8 TYR B 300 TYR B 311 1 12 HELIX 34 AD9 GLU B 313 LEU B 323 1 11 SHEET 1 A 4 VAL A 64 VAL A 67 0 SHEET 2 A 4 ILE A 3 THR A 6 1 N ILE A 3 O ALA A 65 SHEET 3 A 4 LEU A 141 GLY A 145 1 N LEU A 141 O ALA A 4 SHEET 4 A 4 PHE A 166 ASP A 169 1 N ALA A 167 O VAL A 142 SHEET 1 B 4 LEU A 42 GLY A 47 0 SHEET 2 B 4 ALA A 10 ARG A 16 -1 N LEU A 14 O VAL A 43 SHEET 3 B 4 ALA A 100 THR A 106 1 N ALA A 100 O THR A 11 SHEET 4 B 4 GLN A 112 TYR A 117 1 N TYR A 117 O ARG A 101 SHEET 1 C 4 TYR A 191 ASN A 195 0 SHEET 2 C 4 LEU A 219 THR A 223 1 N VAL A 221 O LEU A 192 SHEET 3 C 4 VAL A 229 GLU A 233 -1 N VAL A 232 O ARG A 220 SHEET 4 C 4 THR A 238 VAL A 241 -1 N VAL A 241 O VAL A 229 SHEET 1 E 1 SER A 34 LEU A 38 0 SHEET 1 F 4 VAL B 64 VAL B 67 0 SHEET 2 F 4 ILE B 3 THR B 6 1 N ILE B 3 O ALA B 65 SHEET 3 F 4 LEU B 141 GLY B 145 1 N LEU B 141 O ALA B 4 SHEET 4 F 4 PHE B 166 ASP B 169 1 N ALA B 167 O VAL B 142 SHEET 1 G 4 LEU B 42 GLY B 47 0 SHEET 2 G 4 ALA B 10 ARG B 16 -1 N LEU B 14 O VAL B 43 SHEET 3 G 4 ALA B 100 THR B 106 1 N ALA B 100 O THR B 11 SHEET 4 G 4 GLN B 112 TYR B 117 -1 N TYR B 117 O ARG B 101 SHEET 1 H 4 TYR B 191 ASN B 195 0 SHEET 2 H 4 LEU B 219 THR B 223 1 N VAL B 221 O LEU B 192 SHEET 3 H 4 VAL B 229 GLU B 233 -1 N VAL B 232 O ARG B 220 SHEET 4 H 4 THR B 238 VAL B 241 -1 N VAL B 241 O VAL B 229 SHEET 1 I 1 SER B 34 LEU B 38 0 LINK O ASP A 251 NA NA A 403 1555 1555 3.04 LINK O VAL A 287 NA NA A 403 1555 1555 2.38 LINK O SER A 290 NA NA A 403 1555 1555 2.40 LINK O GLY A 292 NA NA A 403 1555 1555 2.59 LINK O ASP B 251 NA NA B 403 1555 1555 2.72 LINK O VAL B 287 NA NA B 403 1555 1555 2.46 LINK O SER B 290 NA NA B 403 1555 1555 2.38 LINK O GLY B 292 NA NA B 403 1555 1555 2.73 SITE 1 AC1 16 SER A 8 ALA A 10 ASP A 12 GLY A 47 SITE 2 AC1 16 GLY A 48 VAL A 49 ASN A 52 PHE A 102 SITE 3 AC1 16 PHE A 116 ARG A 176 GLY A 254 ASP A 257 SITE 4 AC1 16 HOH A 505 HOH A 563 HOH A 572 SER B 36 SITE 1 AC2 8 PHE A -3 GLY A 225 PRO A 226 VAL A 243 SITE 2 AC2 8 VAL A 244 GLU A 246 VAL A 255 HOH A 577 SITE 1 AC3 4 ASP A 251 VAL A 287 SER A 290 GLY A 292 SITE 1 AC4 17 SER A 36 SER B 8 ALA B 10 ASP B 12 SITE 2 AC4 17 GLY B 47 GLY B 48 VAL B 49 ASN B 52 SITE 3 AC4 17 PHE B 102 PHE B 116 GLN B 172 ARG B 176 SITE 4 AC4 17 ASP B 257 HOH B 510 HOH B 531 HOH B 565 SITE 5 AC4 17 HOH B 570 SITE 1 AC5 6 GLY B 137 PRO B 226 VAL B 244 GLU B 246 SITE 2 AC5 6 GLN B 249 HOH B 553 SITE 1 AC6 5 ASP B 251 THR B 253 VAL B 287 SER B 290 SITE 2 AC6 5 GLY B 292 SITE 1 AC7 4 THR A 105 ILE A 113 THR B 105 ILE B 113 CRYST1 75.236 81.984 158.330 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013292 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012198 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006316 0.00000