HEADER TRANSFERASE 03-FEB-18 6CBK TITLE X-RAY STRUCTURE OF NEOB FROM STREPTOMYCES FRADIAE IN COMPLEX WITH PMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEAMINE TRANSAMINASE NEON; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: GLUTAMATE--6'-DEHYDROPAROMAMINE AMINOTRANSFERASE,NEOMYCIN C COMPND 5 TRANSAMINASE,NEOMYCIN BIOSYNTHESIS PROTEIN 18,NEO-18,NEOMYCIN COMPND 6 BIOSYNTHESIS PROTEIN B,NEOMYCIN BIOSYNTHESIS PROTEIN N; COMPND 7 EC: 2.6.1.93,2.6.1.95; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES FRADIAE; SOURCE 3 ORGANISM_COMMON: STREPTOMYCES ROSEOFLAVUS; SOURCE 4 ORGANISM_TAXID: 1906; SOURCE 5 GENE: NEON, NEO18, NEOB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NEOMYCIN, AMINOTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.B.THODEN,G.T.DOW,H.M.HOLDEN REVDAT 6 04-OCT-23 6CBK 1 LINK REVDAT 5 01-JAN-20 6CBK 1 REMARK REVDAT 4 20-FEB-19 6CBK 1 REMARK REVDAT 3 09-MAY-18 6CBK 1 JRNL REVDAT 2 21-MAR-18 6CBK 1 JRNL REVDAT 1 07-MAR-18 6CBK 0 JRNL AUTH G.T.DOW,J.B.THODEN,H.M.HOLDEN JRNL TITL THE THREE-DIMENSIONAL STRUCTURE OF NEOB: AN AMINOTRANSFERASE JRNL TITL 2 INVOLVED IN THE BIOSYNTHESIS OF NEOMYCIN. JRNL REF PROTEIN SCI. V. 27 945 2018 JRNL REFN ESSN 1469-896X JRNL PMID 29516565 JRNL DOI 10.1002/PRO.3400 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0124 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 97.46 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 3 NUMBER OF REFLECTIONS : 170495 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 8819 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.79 REMARK 3 REFLECTION IN BIN (WORKING SET) : 11503 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.33 REMARK 3 BIN R VALUE (WORKING SET) : 0.2280 REMARK 3 BIN FREE R VALUE SET COUNT : 580 REMARK 3 BIN FREE R VALUE : 0.2710 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 12591 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 69 REMARK 3 SOLVENT ATOMS : 971 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.35000 REMARK 3 B22 (A**2) : -0.13000 REMARK 3 B33 (A**2) : -1.91000 REMARK 3 B12 (A**2) : 0.76000 REMARK 3 B13 (A**2) : -0.89000 REMARK 3 B23 (A**2) : 0.49000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.108 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.106 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.072 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.273 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 13034 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 12346 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 17756 ; 1.620 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): 28199 ; 0.866 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1682 ; 6.252 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 604 ;33.841 ;21.887 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1923 ;15.760 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 157 ;17.749 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1939 ; 0.110 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 15090 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 3135 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 6662 ; 2.695 ; 2.429 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 6661 ; 2.692 ; 2.428 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8327 ; 3.451 ; 3.631 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 8328 ; 3.451 ; 3.631 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 6372 ; 3.902 ; 2.875 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 6372 ; 3.901 ; 2.875 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 9417 ; 5.628 ; 4.149 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 15538 ; 6.528 ;20.352 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 15538 ; 6.528 ;20.351 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6CBK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1000232499. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 179314 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 97.450 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.09400 REMARK 200 R SYM (I) : 0.09400 REMARK 200 FOR THE DATA SET : 39.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.30900 REMARK 200 R SYM FOR SHELL (I) : 0.30900 REMARK 200 FOR SHELL : 9.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6CBO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14-18% PEG-8000, 200 MM REMARK 280 TETRAETHYLAMMONIUM CHLORIDE, 200 MM HEPES, PH 7.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -41.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 LYS A 3 REMARK 465 ASN A 4 REMARK 465 SER A 5 REMARK 465 ASP A 415 REMARK 465 ASP A 416 REMARK 465 LEU A 417 REMARK 465 GLU A 418 REMARK 465 HIS A 419 REMARK 465 HIS A 420 REMARK 465 HIS A 421 REMARK 465 HIS A 422 REMARK 465 HIS A 423 REMARK 465 HIS A 424 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 LYS B 3 REMARK 465 ASN B 4 REMARK 465 SER B 5 REMARK 465 MET C 1 REMARK 465 THR C 2 REMARK 465 LYS C 3 REMARK 465 ASN C 4 REMARK 465 SER C 5 REMARK 465 ASP C 416 REMARK 465 LEU C 417 REMARK 465 GLU C 418 REMARK 465 HIS C 419 REMARK 465 HIS C 420 REMARK 465 HIS C 421 REMARK 465 HIS C 422 REMARK 465 HIS C 423 REMARK 465 HIS C 424 REMARK 465 MET D 1 REMARK 465 THR D 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B 378 CG CD OE1 OE2 REMARK 470 GLU C 378 CG CD OE1 OE2 REMARK 470 LYS D 3 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 791 O HOH B 738 1.98 REMARK 500 OE1 GLU B 36 O HOH B 601 2.07 REMARK 500 NH2 ARG B 291 OE2 GLU B 354 2.12 REMARK 500 O HOH C 714 O HOH D 747 2.18 REMARK 500 O HOH A 814 O HOH B 772 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 116 NE - CZ - NH1 ANGL. DEV. = -4.2 DEGREES REMARK 500 ARG A 116 NE - CZ - NH2 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 275 NE - CZ - NH1 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG A 275 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG B 211 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG B 275 NE - CZ - NH1 ANGL. DEV. = -4.2 DEGREES REMARK 500 ARG C 116 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG C 191 NE - CZ - NH1 ANGL. DEV. = -3.5 DEGREES REMARK 500 ASP D 35 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 ARG D 48 NE - CZ - NH2 ANGL. DEV. = 5.2 DEGREES REMARK 500 ARG D 116 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG D 188 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG D 188 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG D 412 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 51 76.44 -102.86 REMARK 500 LEU A 143 4.61 53.92 REMARK 500 ALA A 166 65.25 -109.84 REMARK 500 LEU A 210 -1.73 72.84 REMARK 500 ALA A 230 -59.95 -166.35 REMARK 500 ALA A 234 28.18 -151.59 REMARK 500 ASP A 344 -155.85 -117.74 REMARK 500 ALA B 223 59.53 39.77 REMARK 500 ALA B 230 -60.33 -166.09 REMARK 500 ALA B 234 25.22 -149.44 REMARK 500 ASP B 344 -153.78 -125.11 REMARK 500 ILE C 51 79.48 -104.17 REMARK 500 GLU C 205 32.14 -95.61 REMARK 500 LEU C 210 -2.17 77.40 REMARK 500 ALA C 230 -61.15 -162.71 REMARK 500 ALA C 234 25.39 -152.27 REMARK 500 ASP C 344 -155.03 -117.01 REMARK 500 ALA D 166 65.73 -109.88 REMARK 500 GLU D 205 32.84 -96.44 REMARK 500 LEU D 210 -0.15 78.78 REMARK 500 ALA D 230 -56.20 -162.31 REMARK 500 ALA D 234 21.99 -153.01 REMARK 500 ASP D 344 -156.29 -120.39 REMARK 500 HIS D 423 53.09 -112.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 852 DISTANCE = 6.32 ANGSTROMS REMARK 525 HOH B 840 DISTANCE = 6.30 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C 502 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 775 O REMARK 620 2 THR C 69 O 89.7 REMARK 620 3 ALA D 28 O 169.4 97.9 REMARK 620 4 SER D 29 OG 93.5 176.6 79.2 REMARK 620 5 HOH D 793 O 85.4 87.9 102.3 91.0 REMARK 620 6 HOH D 832 O 94.7 97.1 77.0 84.0 175.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PMP A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PMP B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PMP C 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA C 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PMP D 501 DBREF 6CBK A 1 416 UNP Q53U08 NEON_STRFR 1 416 DBREF 6CBK B 1 416 UNP Q53U08 NEON_STRFR 1 416 DBREF 6CBK C 1 416 UNP Q53U08 NEON_STRFR 1 416 DBREF 6CBK D 1 416 UNP Q53U08 NEON_STRFR 1 416 SEQADV 6CBK LEU A 417 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK GLU A 418 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK HIS A 419 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK HIS A 420 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK HIS A 421 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK HIS A 422 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK HIS A 423 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK HIS A 424 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK LEU B 417 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK GLU B 418 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK HIS B 419 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK HIS B 420 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK HIS B 421 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK HIS B 422 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK HIS B 423 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK HIS B 424 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK LEU C 417 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK GLU C 418 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK HIS C 419 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK HIS C 420 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK HIS C 421 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK HIS C 422 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK HIS C 423 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK HIS C 424 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK LEU D 417 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK GLU D 418 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK HIS D 419 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK HIS D 420 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK HIS D 421 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK HIS D 422 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK HIS D 423 UNP Q53U08 EXPRESSION TAG SEQADV 6CBK HIS D 424 UNP Q53U08 EXPRESSION TAG SEQRES 1 A 424 MET THR LYS ASN SER SER LEU LEU ALA GLU PHE PRO THR SEQRES 2 A 424 CYS PRO ARG ASP GLU LYS ASP ARG PRO ARG VAL PHE THR SEQRES 3 A 424 ALA ALA SER GLY ALA TRP LEU THR ASP GLU SER GLY PHE SEQRES 4 A 424 ARG TRP ILE ASP PHE ASP ASN ALA ARG GLY SER ILE LEU SEQRES 5 A 424 LEU GLY HIS GLY ASP PRO VAL VAL ALA GLU ALA VAL ALA SEQRES 6 A 424 ARG ALA ALA THR GLY ALA ASP GLY THR ALA THR GLY TRP SEQRES 7 A 424 SER ARG ARG VAL ASP ALA VAL LEU GLU ARG LEU HIS ALA SEQRES 8 A 424 LEU CYS GLY GLY GLU VAL VAL GLY LEU PHE ARG SER GLY SEQRES 9 A 424 THR ALA ALA VAL ARG ALA ALA VAL LEU ALA VAL ARG GLU SEQRES 10 A 424 ALA THR GLY ARG PRO LEU LEU LEU SER ALA GLY TYR HIS SEQRES 11 A 424 GLY TYR ASP PRO MET TRP TYR PRO SER GLU ALA PRO LEU SEQRES 12 A 424 GLU PRO ASN ALA ASP GLY VAL VAL ASP PHE PHE PHE ASP SEQRES 13 A 424 LEU GLY LEU LEU ARG GLU LEU LEU ARG ALA PRO GLU ARG SEQRES 14 A 424 VAL ALA ALA VAL VAL VAL SER PRO ASP HIS MET HIS LEU SEQRES 15 A 424 SER PRO GLY TRP TYR ARG GLU LEU ARG ARG LEU CYS SER SEQRES 16 A 424 ALA ALA GLY VAL VAL LEU VAL ALA ASP GLU VAL LYS VAL SEQRES 17 A 424 GLY LEU ARG TYR ALA PRO GLY LEU SER THR ALA GLU LEU SEQRES 18 A 424 LEU ALA PRO ASP VAL TRP VAL VAL ALA LYS GLY MET ALA SEQRES 19 A 424 ASN GLY HIS ALA VAL SER ALA VAL GLY GLY SER ARG ARG SEQRES 20 A 424 LEU LEU LYS PRO LEU LYS GLU VAL SER PHE THR SER PHE SEQRES 21 A 424 PHE GLU PRO THR ILE LEU ALA ALA ALA ASP ALA ALA LEU SEQRES 22 A 424 ALA ARG VAL ALA THR GLY GLU PRO GLN ARG ALA VAL ARG SEQRES 23 A 424 GLU ALA GLY ASP ARG PHE LEU ARG HIS ALA ARG LYS ALA SEQRES 24 A 424 LEU ASP ASP ALA SER LEU PRO VAL GLU ILE ALA GLY ASP SEQRES 25 A 424 GLY THR PHE PHE GLN PHE VAL PRO ALA THR GLU GLU LEU SEQRES 26 A 424 GLU GLU ALA LEU TYR GLY ALA ALA ASN ALA GLU GLY LEU SEQRES 27 A 424 LEU PHE TYR ALA GLY ASP ASN GLN GLY VAL SER ALA ALA SEQRES 28 A 424 PHE ASP GLU ALA VAL LEU GLY GLU ALA GLU ARG ARG PHE SEQRES 29 A 424 ALA ARG VAL CYS GLU ARG LEU ALA PRO TYR ALA GLY GLY SEQRES 30 A 424 GLU PRO VAL GLY ASP ALA ALA ARG TYR ARG VAL ALA TRP SEQRES 31 A 424 ASN VAL MET ASP GLY LEU ARG GLN ALA PRO ARG ASP ARG SEQRES 32 A 424 GLU GLU THR THR GLY LEU LEU ALA ARG LEU LEU ASP ASP SEQRES 33 A 424 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 424 MET THR LYS ASN SER SER LEU LEU ALA GLU PHE PRO THR SEQRES 2 B 424 CYS PRO ARG ASP GLU LYS ASP ARG PRO ARG VAL PHE THR SEQRES 3 B 424 ALA ALA SER GLY ALA TRP LEU THR ASP GLU SER GLY PHE SEQRES 4 B 424 ARG TRP ILE ASP PHE ASP ASN ALA ARG GLY SER ILE LEU SEQRES 5 B 424 LEU GLY HIS GLY ASP PRO VAL VAL ALA GLU ALA VAL ALA SEQRES 6 B 424 ARG ALA ALA THR GLY ALA ASP GLY THR ALA THR GLY TRP SEQRES 7 B 424 SER ARG ARG VAL ASP ALA VAL LEU GLU ARG LEU HIS ALA SEQRES 8 B 424 LEU CYS GLY GLY GLU VAL VAL GLY LEU PHE ARG SER GLY SEQRES 9 B 424 THR ALA ALA VAL ARG ALA ALA VAL LEU ALA VAL ARG GLU SEQRES 10 B 424 ALA THR GLY ARG PRO LEU LEU LEU SER ALA GLY TYR HIS SEQRES 11 B 424 GLY TYR ASP PRO MET TRP TYR PRO SER GLU ALA PRO LEU SEQRES 12 B 424 GLU PRO ASN ALA ASP GLY VAL VAL ASP PHE PHE PHE ASP SEQRES 13 B 424 LEU GLY LEU LEU ARG GLU LEU LEU ARG ALA PRO GLU ARG SEQRES 14 B 424 VAL ALA ALA VAL VAL VAL SER PRO ASP HIS MET HIS LEU SEQRES 15 B 424 SER PRO GLY TRP TYR ARG GLU LEU ARG ARG LEU CYS SER SEQRES 16 B 424 ALA ALA GLY VAL VAL LEU VAL ALA ASP GLU VAL LYS VAL SEQRES 17 B 424 GLY LEU ARG TYR ALA PRO GLY LEU SER THR ALA GLU LEU SEQRES 18 B 424 LEU ALA PRO ASP VAL TRP VAL VAL ALA LYS GLY MET ALA SEQRES 19 B 424 ASN GLY HIS ALA VAL SER ALA VAL GLY GLY SER ARG ARG SEQRES 20 B 424 LEU LEU LYS PRO LEU LYS GLU VAL SER PHE THR SER PHE SEQRES 21 B 424 PHE GLU PRO THR ILE LEU ALA ALA ALA ASP ALA ALA LEU SEQRES 22 B 424 ALA ARG VAL ALA THR GLY GLU PRO GLN ARG ALA VAL ARG SEQRES 23 B 424 GLU ALA GLY ASP ARG PHE LEU ARG HIS ALA ARG LYS ALA SEQRES 24 B 424 LEU ASP ASP ALA SER LEU PRO VAL GLU ILE ALA GLY ASP SEQRES 25 B 424 GLY THR PHE PHE GLN PHE VAL PRO ALA THR GLU GLU LEU SEQRES 26 B 424 GLU GLU ALA LEU TYR GLY ALA ALA ASN ALA GLU GLY LEU SEQRES 27 B 424 LEU PHE TYR ALA GLY ASP ASN GLN GLY VAL SER ALA ALA SEQRES 28 B 424 PHE ASP GLU ALA VAL LEU GLY GLU ALA GLU ARG ARG PHE SEQRES 29 B 424 ALA ARG VAL CYS GLU ARG LEU ALA PRO TYR ALA GLY GLY SEQRES 30 B 424 GLU PRO VAL GLY ASP ALA ALA ARG TYR ARG VAL ALA TRP SEQRES 31 B 424 ASN VAL MET ASP GLY LEU ARG GLN ALA PRO ARG ASP ARG SEQRES 32 B 424 GLU GLU THR THR GLY LEU LEU ALA ARG LEU LEU ASP ASP SEQRES 33 B 424 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 C 424 MET THR LYS ASN SER SER LEU LEU ALA GLU PHE PRO THR SEQRES 2 C 424 CYS PRO ARG ASP GLU LYS ASP ARG PRO ARG VAL PHE THR SEQRES 3 C 424 ALA ALA SER GLY ALA TRP LEU THR ASP GLU SER GLY PHE SEQRES 4 C 424 ARG TRP ILE ASP PHE ASP ASN ALA ARG GLY SER ILE LEU SEQRES 5 C 424 LEU GLY HIS GLY ASP PRO VAL VAL ALA GLU ALA VAL ALA SEQRES 6 C 424 ARG ALA ALA THR GLY ALA ASP GLY THR ALA THR GLY TRP SEQRES 7 C 424 SER ARG ARG VAL ASP ALA VAL LEU GLU ARG LEU HIS ALA SEQRES 8 C 424 LEU CYS GLY GLY GLU VAL VAL GLY LEU PHE ARG SER GLY SEQRES 9 C 424 THR ALA ALA VAL ARG ALA ALA VAL LEU ALA VAL ARG GLU SEQRES 10 C 424 ALA THR GLY ARG PRO LEU LEU LEU SER ALA GLY TYR HIS SEQRES 11 C 424 GLY TYR ASP PRO MET TRP TYR PRO SER GLU ALA PRO LEU SEQRES 12 C 424 GLU PRO ASN ALA ASP GLY VAL VAL ASP PHE PHE PHE ASP SEQRES 13 C 424 LEU GLY LEU LEU ARG GLU LEU LEU ARG ALA PRO GLU ARG SEQRES 14 C 424 VAL ALA ALA VAL VAL VAL SER PRO ASP HIS MET HIS LEU SEQRES 15 C 424 SER PRO GLY TRP TYR ARG GLU LEU ARG ARG LEU CYS SER SEQRES 16 C 424 ALA ALA GLY VAL VAL LEU VAL ALA ASP GLU VAL LYS VAL SEQRES 17 C 424 GLY LEU ARG TYR ALA PRO GLY LEU SER THR ALA GLU LEU SEQRES 18 C 424 LEU ALA PRO ASP VAL TRP VAL VAL ALA LYS GLY MET ALA SEQRES 19 C 424 ASN GLY HIS ALA VAL SER ALA VAL GLY GLY SER ARG ARG SEQRES 20 C 424 LEU LEU LYS PRO LEU LYS GLU VAL SER PHE THR SER PHE SEQRES 21 C 424 PHE GLU PRO THR ILE LEU ALA ALA ALA ASP ALA ALA LEU SEQRES 22 C 424 ALA ARG VAL ALA THR GLY GLU PRO GLN ARG ALA VAL ARG SEQRES 23 C 424 GLU ALA GLY ASP ARG PHE LEU ARG HIS ALA ARG LYS ALA SEQRES 24 C 424 LEU ASP ASP ALA SER LEU PRO VAL GLU ILE ALA GLY ASP SEQRES 25 C 424 GLY THR PHE PHE GLN PHE VAL PRO ALA THR GLU GLU LEU SEQRES 26 C 424 GLU GLU ALA LEU TYR GLY ALA ALA ASN ALA GLU GLY LEU SEQRES 27 C 424 LEU PHE TYR ALA GLY ASP ASN GLN GLY VAL SER ALA ALA SEQRES 28 C 424 PHE ASP GLU ALA VAL LEU GLY GLU ALA GLU ARG ARG PHE SEQRES 29 C 424 ALA ARG VAL CYS GLU ARG LEU ALA PRO TYR ALA GLY GLY SEQRES 30 C 424 GLU PRO VAL GLY ASP ALA ALA ARG TYR ARG VAL ALA TRP SEQRES 31 C 424 ASN VAL MET ASP GLY LEU ARG GLN ALA PRO ARG ASP ARG SEQRES 32 C 424 GLU GLU THR THR GLY LEU LEU ALA ARG LEU LEU ASP ASP SEQRES 33 C 424 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 D 424 MET THR LYS ASN SER SER LEU LEU ALA GLU PHE PRO THR SEQRES 2 D 424 CYS PRO ARG ASP GLU LYS ASP ARG PRO ARG VAL PHE THR SEQRES 3 D 424 ALA ALA SER GLY ALA TRP LEU THR ASP GLU SER GLY PHE SEQRES 4 D 424 ARG TRP ILE ASP PHE ASP ASN ALA ARG GLY SER ILE LEU SEQRES 5 D 424 LEU GLY HIS GLY ASP PRO VAL VAL ALA GLU ALA VAL ALA SEQRES 6 D 424 ARG ALA ALA THR GLY ALA ASP GLY THR ALA THR GLY TRP SEQRES 7 D 424 SER ARG ARG VAL ASP ALA VAL LEU GLU ARG LEU HIS ALA SEQRES 8 D 424 LEU CYS GLY GLY GLU VAL VAL GLY LEU PHE ARG SER GLY SEQRES 9 D 424 THR ALA ALA VAL ARG ALA ALA VAL LEU ALA VAL ARG GLU SEQRES 10 D 424 ALA THR GLY ARG PRO LEU LEU LEU SER ALA GLY TYR HIS SEQRES 11 D 424 GLY TYR ASP PRO MET TRP TYR PRO SER GLU ALA PRO LEU SEQRES 12 D 424 GLU PRO ASN ALA ASP GLY VAL VAL ASP PHE PHE PHE ASP SEQRES 13 D 424 LEU GLY LEU LEU ARG GLU LEU LEU ARG ALA PRO GLU ARG SEQRES 14 D 424 VAL ALA ALA VAL VAL VAL SER PRO ASP HIS MET HIS LEU SEQRES 15 D 424 SER PRO GLY TRP TYR ARG GLU LEU ARG ARG LEU CYS SER SEQRES 16 D 424 ALA ALA GLY VAL VAL LEU VAL ALA ASP GLU VAL LYS VAL SEQRES 17 D 424 GLY LEU ARG TYR ALA PRO GLY LEU SER THR ALA GLU LEU SEQRES 18 D 424 LEU ALA PRO ASP VAL TRP VAL VAL ALA LYS GLY MET ALA SEQRES 19 D 424 ASN GLY HIS ALA VAL SER ALA VAL GLY GLY SER ARG ARG SEQRES 20 D 424 LEU LEU LYS PRO LEU LYS GLU VAL SER PHE THR SER PHE SEQRES 21 D 424 PHE GLU PRO THR ILE LEU ALA ALA ALA ASP ALA ALA LEU SEQRES 22 D 424 ALA ARG VAL ALA THR GLY GLU PRO GLN ARG ALA VAL ARG SEQRES 23 D 424 GLU ALA GLY ASP ARG PHE LEU ARG HIS ALA ARG LYS ALA SEQRES 24 D 424 LEU ASP ASP ALA SER LEU PRO VAL GLU ILE ALA GLY ASP SEQRES 25 D 424 GLY THR PHE PHE GLN PHE VAL PRO ALA THR GLU GLU LEU SEQRES 26 D 424 GLU GLU ALA LEU TYR GLY ALA ALA ASN ALA GLU GLY LEU SEQRES 27 D 424 LEU PHE TYR ALA GLY ASP ASN GLN GLY VAL SER ALA ALA SEQRES 28 D 424 PHE ASP GLU ALA VAL LEU GLY GLU ALA GLU ARG ARG PHE SEQRES 29 D 424 ALA ARG VAL CYS GLU ARG LEU ALA PRO TYR ALA GLY GLY SEQRES 30 D 424 GLU PRO VAL GLY ASP ALA ALA ARG TYR ARG VAL ALA TRP SEQRES 31 D 424 ASN VAL MET ASP GLY LEU ARG GLN ALA PRO ARG ASP ARG SEQRES 32 D 424 GLU GLU THR THR GLY LEU LEU ALA ARG LEU LEU ASP ASP SEQRES 33 D 424 LEU GLU HIS HIS HIS HIS HIS HIS HET PMP A 501 16 HET EDO A 502 4 HET PMP B 501 16 HET PMP C 501 16 HET NA C 502 1 HET PMP D 501 16 HETNAM PMP 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE HETNAM EDO 1,2-ETHANEDIOL HETNAM NA SODIUM ION HETSYN PMP PYRIDOXAMINE-5'-PHOSPHATE HETSYN EDO ETHYLENE GLYCOL FORMUL 5 PMP 4(C8 H13 N2 O5 P) FORMUL 6 EDO C2 H6 O2 FORMUL 9 NA NA 1+ FORMUL 11 HOH *971(H2 O) HELIX 1 AA1 ASP A 45 SER A 50 1 6 HELIX 2 AA2 ASP A 57 THR A 69 1 13 HELIX 3 AA3 SER A 79 GLY A 94 1 16 HELIX 4 AA4 SER A 103 GLY A 120 1 18 HELIX 5 AA5 ASP A 133 TYR A 137 5 5 HELIX 6 AA6 ASP A 156 LEU A 164 1 9 HELIX 7 AA7 ARG A 165 GLU A 168 5 4 HELIX 8 AA8 SER A 183 GLY A 198 1 16 HELIX 9 AA9 SER A 245 LYS A 250 1 6 HELIX 10 AB1 PRO A 251 VAL A 255 5 5 HELIX 11 AB2 GLU A 262 GLY A 279 1 18 HELIX 12 AB3 GLY A 279 ALA A 303 1 25 HELIX 13 AB4 THR A 322 GLU A 336 1 15 HELIX 14 AB5 ASP A 353 LEU A 371 1 19 HELIX 15 AB6 ALA A 372 ALA A 375 5 4 HELIX 16 AB7 GLY A 381 ASP A 394 1 14 HELIX 17 AB8 ASP A 402 LEU A 414 1 13 HELIX 18 AB9 ASP B 45 SER B 50 1 6 HELIX 19 AC1 ASP B 57 THR B 69 1 13 HELIX 20 AC2 SER B 79 GLY B 94 1 16 HELIX 21 AC3 SER B 103 GLY B 120 1 18 HELIX 22 AC4 ASP B 133 TYR B 137 5 5 HELIX 23 AC5 ASP B 156 LEU B 164 1 9 HELIX 24 AC6 SER B 183 GLY B 198 1 16 HELIX 25 AC7 THR B 218 ALA B 223 1 6 HELIX 26 AC8 SER B 245 LYS B 250 1 6 HELIX 27 AC9 PRO B 251 VAL B 255 5 5 HELIX 28 AD1 GLU B 262 THR B 278 1 17 HELIX 29 AD2 GLY B 279 ALA B 303 1 25 HELIX 30 AD3 THR B 322 GLU B 336 1 15 HELIX 31 AD4 ASP B 353 LEU B 371 1 19 HELIX 32 AD5 ALA B 372 ALA B 375 5 4 HELIX 33 AD6 GLY B 381 ASP B 394 1 14 HELIX 34 AD7 ASP B 402 GLU B 418 1 17 HELIX 35 AD8 ASP C 45 SER C 50 1 6 HELIX 36 AD9 ASP C 57 ALA C 68 1 12 HELIX 37 AE1 SER C 79 GLY C 94 1 16 HELIX 38 AE2 SER C 103 GLY C 120 1 18 HELIX 39 AE3 ASP C 133 TYR C 137 5 5 HELIX 40 AE4 ASP C 156 LEU C 164 1 9 HELIX 41 AE5 ALA C 166 GLU C 168 5 3 HELIX 42 AE6 SER C 183 GLY C 198 1 16 HELIX 43 AE7 THR C 218 ALA C 223 1 6 HELIX 44 AE8 SER C 245 LYS C 250 1 6 HELIX 45 AE9 PRO C 251 VAL C 255 5 5 HELIX 46 AF1 GLU C 262 GLY C 279 1 18 HELIX 47 AF2 GLY C 279 ALA C 303 1 25 HELIX 48 AF3 THR C 322 GLU C 336 1 15 HELIX 49 AF4 ASP C 353 LEU C 371 1 19 HELIX 50 AF5 ALA C 372 ALA C 375 5 4 HELIX 51 AF6 GLY C 381 ASP C 394 1 14 HELIX 52 AF7 ASP C 402 LEU C 414 1 13 HELIX 53 AF8 ASP D 45 SER D 50 1 6 HELIX 54 AF9 ASP D 57 THR D 69 1 13 HELIX 55 AG1 SER D 79 GLY D 94 1 16 HELIX 56 AG2 SER D 103 GLY D 120 1 18 HELIX 57 AG3 ASP D 133 TYR D 137 5 5 HELIX 58 AG4 ASP D 156 LEU D 164 1 9 HELIX 59 AG5 ARG D 165 GLU D 168 5 4 HELIX 60 AG6 SER D 183 GLY D 198 1 16 HELIX 61 AG7 THR D 218 ALA D 223 1 6 HELIX 62 AG8 SER D 245 LYS D 250 1 6 HELIX 63 AG9 PRO D 251 VAL D 255 5 5 HELIX 64 AH1 PHE D 257 PHE D 261 5 5 HELIX 65 AH2 GLU D 262 THR D 278 1 17 HELIX 66 AH3 GLY D 279 ALA D 303 1 25 HELIX 67 AH4 THR D 322 GLY D 337 1 16 HELIX 68 AH5 ASP D 353 LEU D 371 1 19 HELIX 69 AH6 ALA D 372 ALA D 375 5 4 HELIX 70 AH7 GLY D 381 ASP D 394 1 14 HELIX 71 AH8 ASP D 402 LEU D 417 1 16 SHEET 1 AA1 4 PHE A 25 SER A 29 0 SHEET 2 AA1 4 TRP A 32 ASP A 35 -1 O TRP A 32 N SER A 29 SHEET 3 AA1 4 ARG A 40 ASP A 43 -1 O TRP A 41 N LEU A 33 SHEET 4 AA1 4 LEU A 338 LEU A 339 1 O LEU A 339 N ILE A 42 SHEET 1 AA2 7 VAL A 97 PHE A 101 0 SHEET 2 AA2 7 SER A 240 GLY A 244 -1 O VAL A 242 N GLY A 99 SHEET 3 AA2 7 VAL A 226 VAL A 229 -1 N VAL A 229 O ALA A 241 SHEET 4 AA2 7 VAL A 200 GLU A 205 1 N ALA A 203 O VAL A 226 SHEET 5 AA2 7 VAL A 170 VAL A 175 1 N VAL A 173 O VAL A 202 SHEET 6 AA2 7 LEU A 123 ALA A 127 1 N LEU A 125 O VAL A 174 SHEET 7 AA2 7 VAL A 150 ASP A 152 1 O VAL A 151 N SER A 126 SHEET 1 AA3 2 VAL A 307 GLY A 311 0 SHEET 2 AA3 2 PHE A 316 PRO A 320 -1 O VAL A 319 N GLU A 308 SHEET 1 AA4 4 PHE B 25 SER B 29 0 SHEET 2 AA4 4 TRP B 32 ASP B 35 -1 O TRP B 32 N SER B 29 SHEET 3 AA4 4 ARG B 40 ASP B 43 -1 O TRP B 41 N LEU B 33 SHEET 4 AA4 4 LEU B 338 LEU B 339 1 O LEU B 339 N ILE B 42 SHEET 1 AA5 7 VAL B 97 PHE B 101 0 SHEET 2 AA5 7 SER B 240 GLY B 244 -1 O VAL B 242 N GLY B 99 SHEET 3 AA5 7 VAL B 226 VAL B 229 -1 N VAL B 229 O ALA B 241 SHEET 4 AA5 7 VAL B 200 GLU B 205 1 N ALA B 203 O VAL B 226 SHEET 5 AA5 7 VAL B 170 VAL B 175 1 N VAL B 173 O VAL B 202 SHEET 6 AA5 7 LEU B 123 ALA B 127 1 N LEU B 125 O VAL B 174 SHEET 7 AA5 7 VAL B 150 ASP B 152 1 O VAL B 151 N LEU B 124 SHEET 1 AA6 2 VAL B 307 ASP B 312 0 SHEET 2 AA6 2 PHE B 315 PRO B 320 -1 O VAL B 319 N GLU B 308 SHEET 1 AA7 4 PHE C 25 SER C 29 0 SHEET 2 AA7 4 TRP C 32 ASP C 35 -1 O THR C 34 N ALA C 27 SHEET 3 AA7 4 ARG C 40 ASP C 43 -1 O TRP C 41 N LEU C 33 SHEET 4 AA7 4 LEU C 338 LEU C 339 1 O LEU C 339 N ILE C 42 SHEET 1 AA8 7 VAL C 97 PHE C 101 0 SHEET 2 AA8 7 SER C 240 GLY C 244 -1 O VAL C 242 N GLY C 99 SHEET 3 AA8 7 VAL C 226 VAL C 229 -1 N VAL C 229 O ALA C 241 SHEET 4 AA8 7 VAL C 200 GLU C 205 1 N ALA C 203 O VAL C 226 SHEET 5 AA8 7 VAL C 170 VAL C 175 1 N VAL C 173 O VAL C 202 SHEET 6 AA8 7 LEU C 123 ALA C 127 1 N LEU C 125 O VAL C 174 SHEET 7 AA8 7 VAL C 150 ASP C 152 1 O VAL C 151 N LEU C 124 SHEET 1 AA9 2 VAL C 307 GLY C 311 0 SHEET 2 AA9 2 PHE C 316 PRO C 320 -1 O VAL C 319 N GLU C 308 SHEET 1 AB1 4 PHE D 25 SER D 29 0 SHEET 2 AB1 4 TRP D 32 ASP D 35 -1 O THR D 34 N ALA D 27 SHEET 3 AB1 4 ARG D 40 ASP D 43 -1 O TRP D 41 N LEU D 33 SHEET 4 AB1 4 LEU D 338 LEU D 339 1 O LEU D 339 N ILE D 42 SHEET 1 AB2 7 VAL D 97 PHE D 101 0 SHEET 2 AB2 7 SER D 240 GLY D 244 -1 O VAL D 242 N GLY D 99 SHEET 3 AB2 7 VAL D 226 VAL D 229 -1 N VAL D 229 O ALA D 241 SHEET 4 AB2 7 VAL D 200 GLU D 205 1 N ALA D 203 O VAL D 226 SHEET 5 AB2 7 VAL D 170 VAL D 175 1 N VAL D 173 O VAL D 202 SHEET 6 AB2 7 LEU D 123 ALA D 127 1 N LEU D 125 O VAL D 174 SHEET 7 AB2 7 VAL D 150 ASP D 152 1 O VAL D 151 N SER D 126 SHEET 1 AB3 2 VAL D 307 GLY D 311 0 SHEET 2 AB3 2 PHE D 316 PRO D 320 -1 O VAL D 319 N GLU D 308 LINK O HOH B 775 NA NA C 502 1555 1555 2.41 LINK O THR C 69 NA NA C 502 1555 1555 2.30 LINK NA NA C 502 O ALA D 28 1555 1555 2.42 LINK NA NA C 502 OG BSER D 29 1555 1555 2.42 LINK NA NA C 502 O HOH D 793 1555 1555 2.47 LINK NA NA C 502 O HOH D 832 1555 1555 2.65 SITE 1 AC1 15 SER A 103 GLY A 104 THR A 105 TYR A 129 SITE 2 AC1 15 HIS A 130 GLY A 131 SER A 176 ASP A 204 SITE 3 AC1 15 VAL A 206 LYS A 231 HOH A 659 HOH A 680 SITE 4 AC1 15 HOH A 752 PHE B 257 THR B 258 SITE 1 AC2 4 LEU A 53 ASP A 57 ARG A 275 HOH A 611 SITE 1 AC3 17 PHE A 257 THR A 258 GLY B 104 THR B 105 SITE 2 AC3 17 TYR B 129 HIS B 130 GLY B 131 SER B 176 SITE 3 AC3 17 ASP B 204 VAL B 206 LYS B 207 LYS B 231 SITE 4 AC3 17 HIS B 424 HOH B 604 HOH B 632 HOH B 634 SITE 5 AC3 17 HOH B 736 SITE 1 AC4 17 SER C 103 GLY C 104 THR C 105 TYR C 129 SITE 2 AC4 17 HIS C 130 GLY C 131 SER C 176 ASP C 204 SITE 3 AC4 17 VAL C 206 LYS C 207 LYS C 231 HOH C 606 SITE 4 AC4 17 HOH C 613 HOH C 695 HOH C 722 PHE D 257 SITE 5 AC4 17 THR D 258 SITE 1 AC5 6 HOH B 775 THR C 69 ALA D 28 SER D 29 SITE 2 AC5 6 HOH D 793 HOH D 832 SITE 1 AC6 15 PHE C 257 THR C 258 GLY D 104 THR D 105 SITE 2 AC6 15 TYR D 129 HIS D 130 GLY D 131 SER D 176 SITE 3 AC6 15 ASP D 204 VAL D 206 LYS D 231 HIS D 424 SITE 4 AC6 15 HOH D 623 HOH D 712 HOH D 751 CRYST1 62.726 82.705 100.860 75.59 88.85 70.60 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015942 -0.005614 0.001160 0.00000 SCALE2 0.000000 0.012819 -0.003407 0.00000 SCALE3 0.000000 0.000000 0.010261 0.00000