HEADER TRANSCRIPTION/AGONIST 05-FEB-18 6CBQ TITLE CRYSTAL STRUCTURE OF QSCR BOUND TO AGONIST S3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LUXR FAMILY TRANSCRIPTIONAL REGULATOR; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PHZR,QUORUM-SENSING CONTROL REPRESSOR,REGULATORY PROTEIN COMPND 5 SDIA; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: PHZR, QSCR, SDIA_2, CAZ03_14830, CAZ10_26210, DC19_16645, SOURCE 5 HQ52_16845, PAERUG_E15_LONDON_28_01_14_06284, PAMH19_5306; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LUXR-TYPE AHL RECEPTOR, PSEUDOMONAS AERUGINOSA QSCR, TRANSCRIPTION, KEYWDS 2 TRANSCRIPTION-AGONIST COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.E.A.CHURCHILL,C.L.WYSOCZYNSKI-HORITA REVDAT 4 04-OCT-23 6CBQ 1 REMARK REVDAT 3 27-NOV-19 6CBQ 1 REMARK REVDAT 2 09-MAY-18 6CBQ 1 JRNL REVDAT 1 28-FEB-18 6CBQ 0 JRNL AUTH C.L.WYSOCZYNSKI-HORITA,M.E.BOURSIER,R.HILL,K.HANSEN, JRNL AUTH 2 H.E.BLACKWELL,M.E.A.CHURCHILL JRNL TITL MECHANISM OF AGONISM AND ANTAGONISM OF THE PSEUDOMONAS JRNL TITL 2 AERUGINOSA QUORUM SENSING REGULATOR QSCR WITH NON-NATIVE JRNL TITL 3 LIGANDS. JRNL REF MOL. MICROBIOL. V. 108 240 2018 JRNL REFN ESSN 1365-2958 JRNL PMID 29437248 JRNL DOI 10.1111/MMI.13930 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.E.MATTMANN,P.M.SHIPWAY,N.J.HETH,H.E.BLACKWELL REMARK 1 TITL POTENT AND SELECTIVE SYNTHETIC MODULATORS OF A QUORUM REMARK 1 TITL 2 SENSING REPRESSOR IN PSEUDOMONAS AERUGINOSA IDENTIFIED FROM REMARK 1 TITL 3 SECOND-GENERATION LIBRARIES OF N-ACYLATED L-HOMOSERINE REMARK 1 TITL 4 LACTONES. REMARK 1 REF CHEMBIOCHEM V. 12 942 2011 REMARK 1 REFN ESSN 1439-7633 REMARK 1 PMID 21365734 REMARK 1 DOI 10.1002/CBIC.201000708 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.06 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 13661 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 685 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.0666 - 4.7867 0.99 2721 130 0.1843 0.2213 REMARK 3 2 4.7867 - 3.7999 1.00 2610 126 0.1897 0.2344 REMARK 3 3 3.7999 - 3.3197 1.00 2567 156 0.2283 0.3007 REMARK 3 4 3.3197 - 3.0162 0.99 2531 141 0.2624 0.3525 REMARK 3 5 3.0162 - 2.8001 0.99 2547 132 0.3228 0.4154 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.470 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 3970 REMARK 3 ANGLE : 0.405 5378 REMARK 3 CHIRALITY : 0.037 579 REMARK 3 PLANARITY : 0.002 679 REMARK 3 DIHEDRAL : 8.862 2322 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 4:15) REMARK 3 ORIGIN FOR THE GROUP (A): 7.6179 -19.8489 9.1583 REMARK 3 T TENSOR REMARK 3 T11: 1.3827 T22: 0.8153 REMARK 3 T33: 1.3379 T12: -0.3088 REMARK 3 T13: 0.0950 T23: -0.4040 REMARK 3 L TENSOR REMARK 3 L11: 2.4757 L22: 1.3409 REMARK 3 L33: 4.3140 L12: -1.7059 REMARK 3 L13: -2.9784 L23: 2.3979 REMARK 3 S TENSOR REMARK 3 S11: 0.3989 S12: -0.1254 S13: 1.1213 REMARK 3 S21: 0.2738 S22: -0.7570 S23: 0.6634 REMARK 3 S31: -2.0140 S32: -0.3204 S33: 0.2503 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 16:20) REMARK 3 ORIGIN FOR THE GROUP (A): 12.6317 -31.2669 15.2754 REMARK 3 T TENSOR REMARK 3 T11: 1.2282 T22: 1.3568 REMARK 3 T33: 0.5720 T12: -0.5046 REMARK 3 T13: 0.0724 T23: -0.1414 REMARK 3 L TENSOR REMARK 3 L11: 2.0505 L22: 6.0710 REMARK 3 L33: 0.0479 L12: 3.5033 REMARK 3 L13: 0.3167 L23: 0.5233 REMARK 3 S TENSOR REMARK 3 S11: 0.1108 S12: 0.0565 S13: -0.2906 REMARK 3 S21: 0.9498 S22: -0.2201 S23: -1.3369 REMARK 3 S31: 0.4654 S32: 0.9051 S33: -0.0736 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 21:86) REMARK 3 ORIGIN FOR THE GROUP (A): 6.8800 -41.8517 2.6016 REMARK 3 T TENSOR REMARK 3 T11: 0.3710 T22: 0.5275 REMARK 3 T33: 0.3403 T12: -0.0988 REMARK 3 T13: 0.0490 T23: -0.0283 REMARK 3 L TENSOR REMARK 3 L11: 3.7380 L22: 2.6970 REMARK 3 L33: 0.7606 L12: 0.4235 REMARK 3 L13: 0.4423 L23: -0.8673 REMARK 3 S TENSOR REMARK 3 S11: 0.2005 S12: -0.1836 S13: 0.2002 REMARK 3 S21: 0.3497 S22: -0.2206 S23: -0.1979 REMARK 3 S31: -0.0770 S32: 0.4765 S33: -0.0006 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 87:144) REMARK 3 ORIGIN FOR THE GROUP (A): -1.7862 -41.2122 -2.6581 REMARK 3 T TENSOR REMARK 3 T11: 0.3224 T22: 0.3230 REMARK 3 T33: 0.2477 T12: -0.0296 REMARK 3 T13: 0.0565 T23: -0.0531 REMARK 3 L TENSOR REMARK 3 L11: 2.5476 L22: 1.7247 REMARK 3 L33: 2.8061 L12: 0.7178 REMARK 3 L13: 0.6980 L23: -0.3679 REMARK 3 S TENSOR REMARK 3 S11: 0.0333 S12: 0.1499 S13: 0.0886 REMARK 3 S21: -0.1412 S22: 0.0331 S23: 0.3164 REMARK 3 S31: 0.0459 S32: -0.3868 S33: -0.0001 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 145:169) REMARK 3 ORIGIN FOR THE GROUP (A): 10.9382 -29.4103 2.1457 REMARK 3 T TENSOR REMARK 3 T11: 0.5570 T22: 0.5389 REMARK 3 T33: 0.5631 T12: -0.1004 REMARK 3 T13: 0.0510 T23: -0.0864 REMARK 3 L TENSOR REMARK 3 L11: 5.3955 L22: 0.0479 REMARK 3 L33: 1.4969 L12: -0.2215 REMARK 3 L13: -1.0346 L23: -0.0009 REMARK 3 S TENSOR REMARK 3 S11: 0.5535 S12: -1.3080 S13: 1.6572 REMARK 3 S21: 0.3921 S22: -0.3087 S23: 0.0104 REMARK 3 S31: -0.5765 S32: 1.0698 S33: 0.1493 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 170:210) REMARK 3 ORIGIN FOR THE GROUP (A): 40.6633 -35.5796 -12.2129 REMARK 3 T TENSOR REMARK 3 T11: 0.4288 T22: 0.3508 REMARK 3 T33: 0.3837 T12: -0.1636 REMARK 3 T13: 0.0039 T23: -0.0389 REMARK 3 L TENSOR REMARK 3 L11: 2.2467 L22: 0.8777 REMARK 3 L33: 2.2481 L12: 0.3170 REMARK 3 L13: 1.7615 L23: 0.0384 REMARK 3 S TENSOR REMARK 3 S11: 0.0280 S12: -0.0232 S13: -0.1959 REMARK 3 S21: 0.2398 S22: -0.2590 S23: -0.2092 REMARK 3 S31: 0.2765 S32: 0.5103 S33: -0.0130 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 211:237) REMARK 3 ORIGIN FOR THE GROUP (A): 33.9005 -39.2206 -5.9796 REMARK 3 T TENSOR REMARK 3 T11: 0.4894 T22: 0.5048 REMARK 3 T33: 0.4226 T12: -0.1828 REMARK 3 T13: -0.0064 T23: -0.0436 REMARK 3 L TENSOR REMARK 3 L11: 1.6840 L22: 1.1805 REMARK 3 L33: 0.9069 L12: -0.0539 REMARK 3 L13: -0.1091 L23: 0.7939 REMARK 3 S TENSOR REMARK 3 S11: 0.3074 S12: -1.5191 S13: -0.1104 REMARK 3 S21: 0.5878 S22: -0.2795 S23: 0.3985 REMARK 3 S31: 0.6297 S32: -0.7153 S33: -0.0356 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN B AND RESID 4:39) REMARK 3 ORIGIN FOR THE GROUP (A): 3.0238 -20.9730 -23.8816 REMARK 3 T TENSOR REMARK 3 T11: 1.5399 T22: 1.3782 REMARK 3 T33: 1.5817 T12: 0.5047 REMARK 3 T13: -0.1032 T23: 0.3776 REMARK 3 L TENSOR REMARK 3 L11: 0.3928 L22: 0.5298 REMARK 3 L33: 0.8640 L12: 0.4087 REMARK 3 L13: -0.5510 L23: -0.4972 REMARK 3 S TENSOR REMARK 3 S11: 0.8217 S12: 1.8949 S13: 0.2807 REMARK 3 S21: -1.1416 S22: -0.3162 S23: -0.1990 REMARK 3 S31: -0.1312 S32: -1.1388 S33: -0.0075 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN B AND RESID 40:54) REMARK 3 ORIGIN FOR THE GROUP (A): 23.1953 -30.1863 -22.6182 REMARK 3 T TENSOR REMARK 3 T11: 0.9845 T22: 0.8851 REMARK 3 T33: 0.7990 T12: 0.1896 REMARK 3 T13: 0.3113 T23: 0.2989 REMARK 3 L TENSOR REMARK 3 L11: 3.0110 L22: 1.7472 REMARK 3 L33: 3.8873 L12: 2.0149 REMARK 3 L13: 3.3950 L23: 2.2345 REMARK 3 S TENSOR REMARK 3 S11: 0.4711 S12: 1.5378 S13: -0.0027 REMARK 3 S21: -0.3179 S22: -0.0969 S23: -0.3880 REMARK 3 S31: -0.1477 S32: 1.0914 S33: 1.0327 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN B AND RESID 55:113) REMARK 3 ORIGIN FOR THE GROUP (A): 22.9374 -13.4785 -19.0805 REMARK 3 T TENSOR REMARK 3 T11: 1.2920 T22: 0.5300 REMARK 3 T33: 2.0291 T12: -0.1880 REMARK 3 T13: 0.5078 T23: 0.2486 REMARK 3 L TENSOR REMARK 3 L11: 0.2467 L22: 0.3872 REMARK 3 L33: 0.9156 L12: -0.3015 REMARK 3 L13: -0.3971 L23: 0.6090 REMARK 3 S TENSOR REMARK 3 S11: 0.5957 S12: 0.5341 S13: 2.3675 REMARK 3 S21: 0.3893 S22: 0.1321 S23: 0.5285 REMARK 3 S31: -1.3608 S32: 0.3431 S33: 1.0912 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN B AND RESID 114:131) REMARK 3 ORIGIN FOR THE GROUP (A): 13.8253 -24.9966 -15.6152 REMARK 3 T TENSOR REMARK 3 T11: 0.9399 T22: 0.6827 REMARK 3 T33: 0.8899 T12: 0.0343 REMARK 3 T13: 0.2214 T23: 0.1321 REMARK 3 L TENSOR REMARK 3 L11: 0.2314 L22: 0.2769 REMARK 3 L33: 0.1689 L12: 0.2745 REMARK 3 L13: -0.0760 L23: -0.1296 REMARK 3 S TENSOR REMARK 3 S11: 0.3395 S12: 0.9545 S13: 1.0747 REMARK 3 S21: 0.1086 S22: -0.1613 S23: 0.3953 REMARK 3 S31: 0.0157 S32: -0.6995 S33: -0.0003 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN B AND RESID 132:175) REMARK 3 ORIGIN FOR THE GROUP (A): 8.8826 -23.7249 -17.0394 REMARK 3 T TENSOR REMARK 3 T11: 0.7228 T22: 0.8276 REMARK 3 T33: 1.3966 T12: 0.1406 REMARK 3 T13: 0.1895 T23: -0.0020 REMARK 3 L TENSOR REMARK 3 L11: 2.0579 L22: 2.1044 REMARK 3 L33: 0.6386 L12: -0.2992 REMARK 3 L13: 0.2046 L23: -0.3908 REMARK 3 S TENSOR REMARK 3 S11: 0.7119 S12: 1.1629 S13: 1.6279 REMARK 3 S21: -0.9796 S22: -0.1201 S23: 1.0273 REMARK 3 S31: -0.4284 S32: -0.2853 S33: 0.1311 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN B AND RESID 176:214) REMARK 3 ORIGIN FOR THE GROUP (A): 27.0113 -57.8317 -13.9248 REMARK 3 T TENSOR REMARK 3 T11: 0.6750 T22: 0.2549 REMARK 3 T33: 1.2677 T12: -0.4387 REMARK 3 T13: 0.1908 T23: -0.3203 REMARK 3 L TENSOR REMARK 3 L11: 2.7472 L22: 0.7158 REMARK 3 L33: 0.8048 L12: -1.1549 REMARK 3 L13: -0.6510 L23: 0.5278 REMARK 3 S TENSOR REMARK 3 S11: -1.7302 S12: -0.1673 S13: -2.4961 REMARK 3 S21: -0.0292 S22: 0.1255 S23: 0.1842 REMARK 3 S31: 1.4613 S32: 0.0149 S33: -1.4252 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: (CHAIN B AND RESID 215:237) REMARK 3 ORIGIN FOR THE GROUP (A): 24.6539 -45.9760 -19.1321 REMARK 3 T TENSOR REMARK 3 T11: 0.5892 T22: 0.7788 REMARK 3 T33: 0.6633 T12: -0.3093 REMARK 3 T13: -0.0267 T23: -0.3959 REMARK 3 L TENSOR REMARK 3 L11: 0.1608 L22: 0.5394 REMARK 3 L33: 9.7350 L12: -0.1085 REMARK 3 L13: -0.6413 L23: -0.3448 REMARK 3 S TENSOR REMARK 3 S11: -0.1367 S12: 0.5136 S13: 0.2795 REMARK 3 S21: -1.0299 S22: 0.6320 S23: -0.4125 REMARK 3 S31: -0.6194 S32: -1.5405 S33: 1.9260 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6CBQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1000232512. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CMOS REMARK 200 DETECTOR MANUFACTURER : RDI CMOS_8M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13685 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 47.060 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09000 REMARK 200 FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.54500 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3SZT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M POTASSIUM CITRATE, 20 W/V PEG REMARK 280 3350 AND 5% GLYCEROL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 35.22667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 70.45333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 70.45333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 35.22667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20970 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 403 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 2 REMARK 465 ASP A 3 REMARK 465 MET B 1 REMARK 465 HIS B 2 REMARK 465 ASP B 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 4 CG CD OE1 OE2 REMARK 470 LEU A 143 CG CD1 CD2 REMARK 470 GLU B 4 CG CD OE1 OE2 REMARK 470 ARG B 5 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 70 CG OD1 OD2 REMARK 470 ARG B 175 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 48 -75.09 -72.51 REMARK 500 GLU A 135 102.07 63.89 REMARK 500 THR B 48 -74.67 -78.79 REMARK 500 ARG B 111 -67.07 -123.76 REMARK 500 GLU B 135 107.61 64.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EVY A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EVY B 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3SZT RELATED DB: PDB REMARK 900 QSCR IN COMPLEX WITH 3-OXO-C12-HSL DBREF 6CBQ A 1 237 UNP Q9RMS5 Q9RMS5_PSEAI 1 237 DBREF 6CBQ B 1 237 UNP Q9RMS5 Q9RMS5_PSEAI 1 237 SEQRES 1 A 237 MET HIS ASP GLU ARG GLU GLY TYR LEU GLU ILE LEU SER SEQRES 2 A 237 ARG ILE THR THR GLU GLU GLU PHE PHE SER LEU VAL LEU SEQRES 3 A 237 GLU ILE CYS GLY ASN TYR GLY PHE GLU PHE PHE SER PHE SEQRES 4 A 237 GLY ALA ARG ALA PRO PHE PRO LEU THR ALA PRO LYS TYR SEQRES 5 A 237 HIS PHE LEU SER ASN TYR PRO GLY GLU TRP LYS SER ARG SEQRES 6 A 237 TYR ILE SER GLU ASP TYR THR SER ILE ASP PRO ILE VAL SEQRES 7 A 237 ARG HIS GLY LEU LEU GLU TYR THR PRO LEU ILE TRP ASN SEQRES 8 A 237 GLY GLU ASP PHE GLN GLU ASN ARG PHE PHE TRP GLU GLU SEQRES 9 A 237 ALA LEU HIS HIS GLY ILE ARG HIS GLY TRP SER ILE PRO SEQRES 10 A 237 VAL ARG GLY LYS TYR GLY LEU ILE SER MET LEU SER LEU SEQRES 11 A 237 VAL ARG SER SER GLU SER ILE ALA ALA THR GLU ILE LEU SEQRES 12 A 237 GLU LYS GLU SER PHE LEU LEU TRP ILE THR SER MET LEU SEQRES 13 A 237 GLN ALA THR PHE GLY ASP LEU LEU ALA PRO ARG ILE VAL SEQRES 14 A 237 PRO GLU SER ASN VAL ARG LEU THR ALA ARG GLU THR GLU SEQRES 15 A 237 MET LEU LYS TRP THR ALA VAL GLY LYS THR TYR GLY GLU SEQRES 16 A 237 ILE GLY LEU ILE LEU SER ILE ASP GLN ARG THR VAL LYS SEQRES 17 A 237 PHE HIS ILE VAL ASN ALA MET ARG LYS LEU ASN SER SER SEQRES 18 A 237 ASN LYS ALA GLU ALA THR MET LYS ALA TYR ALA ILE GLY SEQRES 19 A 237 LEU LEU ASN SEQRES 1 B 237 MET HIS ASP GLU ARG GLU GLY TYR LEU GLU ILE LEU SER SEQRES 2 B 237 ARG ILE THR THR GLU GLU GLU PHE PHE SER LEU VAL LEU SEQRES 3 B 237 GLU ILE CYS GLY ASN TYR GLY PHE GLU PHE PHE SER PHE SEQRES 4 B 237 GLY ALA ARG ALA PRO PHE PRO LEU THR ALA PRO LYS TYR SEQRES 5 B 237 HIS PHE LEU SER ASN TYR PRO GLY GLU TRP LYS SER ARG SEQRES 6 B 237 TYR ILE SER GLU ASP TYR THR SER ILE ASP PRO ILE VAL SEQRES 7 B 237 ARG HIS GLY LEU LEU GLU TYR THR PRO LEU ILE TRP ASN SEQRES 8 B 237 GLY GLU ASP PHE GLN GLU ASN ARG PHE PHE TRP GLU GLU SEQRES 9 B 237 ALA LEU HIS HIS GLY ILE ARG HIS GLY TRP SER ILE PRO SEQRES 10 B 237 VAL ARG GLY LYS TYR GLY LEU ILE SER MET LEU SER LEU SEQRES 11 B 237 VAL ARG SER SER GLU SER ILE ALA ALA THR GLU ILE LEU SEQRES 12 B 237 GLU LYS GLU SER PHE LEU LEU TRP ILE THR SER MET LEU SEQRES 13 B 237 GLN ALA THR PHE GLY ASP LEU LEU ALA PRO ARG ILE VAL SEQRES 14 B 237 PRO GLU SER ASN VAL ARG LEU THR ALA ARG GLU THR GLU SEQRES 15 B 237 MET LEU LYS TRP THR ALA VAL GLY LYS THR TYR GLY GLU SEQRES 16 B 237 ILE GLY LEU ILE LEU SER ILE ASP GLN ARG THR VAL LYS SEQRES 17 B 237 PHE HIS ILE VAL ASN ALA MET ARG LYS LEU ASN SER SER SEQRES 18 B 237 ASN LYS ALA GLU ALA THR MET LYS ALA TYR ALA ILE GLY SEQRES 19 B 237 LEU LEU ASN HET EVY A 301 24 HET EVY B 301 24 HETNAM EVY (2S)-2-HEXYL-N-[(3S)-2-OXOOXOLAN-3-YL]DECANAMIDE FORMUL 3 EVY 2(C20 H37 N O3) FORMUL 5 HOH *10(H2 O) HELIX 1 AA1 ARG A 5 ILE A 15 1 11 HELIX 2 AA2 THR A 17 TYR A 32 1 16 HELIX 3 AA3 PRO A 59 GLU A 69 1 11 HELIX 4 AA4 ASP A 70 ILE A 74 5 5 HELIX 5 AA5 ASP A 75 GLU A 84 1 10 HELIX 6 AA6 ASN A 98 HIS A 108 1 11 HELIX 7 AA7 LYS A 121 GLY A 123 5 3 HELIX 8 AA8 ALA A 138 VAL A 169 1 32 HELIX 9 AA9 PRO A 170 VAL A 174 5 5 HELIX 10 AB1 THR A 177 VAL A 189 1 13 HELIX 11 AB2 THR A 192 SER A 201 1 10 HELIX 12 AB3 ASP A 203 LEU A 218 1 16 HELIX 13 AB4 ASN A 222 GLY A 234 1 13 HELIX 14 AB5 GLY B 7 LEU B 12 1 6 HELIX 15 AB6 THR B 17 TYR B 32 1 16 HELIX 16 AB7 PRO B 59 GLU B 69 1 11 HELIX 17 AB8 ASP B 70 ILE B 74 5 5 HELIX 18 AB9 ASP B 75 GLU B 84 1 10 HELIX 19 AC1 ASN B 98 LEU B 106 1 9 HELIX 20 AC2 HIS B 107 GLY B 109 5 3 HELIX 21 AC3 LYS B 121 GLY B 123 5 3 HELIX 22 AC4 ALA B 138 VAL B 169 1 32 HELIX 23 AC5 PRO B 170 VAL B 174 5 5 HELIX 24 AC6 THR B 177 VAL B 189 1 13 HELIX 25 AC7 THR B 192 SER B 201 1 10 HELIX 26 AC8 ASP B 203 LEU B 218 1 16 HELIX 27 AC9 ASN B 222 GLY B 234 1 13 SHEET 1 AA1 5 TYR A 52 SER A 56 0 SHEET 2 AA1 5 PHE A 36 ARG A 42 -1 N PHE A 39 O LEU A 55 SHEET 3 AA1 5 ILE A 125 ARG A 132 -1 O VAL A 131 N PHE A 36 SHEET 4 AA1 5 HIS A 112 ARG A 119 -1 N VAL A 118 O SER A 126 SHEET 5 AA1 5 LEU A 88 ASN A 91 -1 N LEU A 88 O SER A 115 SHEET 1 AA2 5 TYR B 52 SER B 56 0 SHEET 2 AA2 5 PHE B 36 ARG B 42 -1 N ALA B 41 O HIS B 53 SHEET 3 AA2 5 ILE B 125 ARG B 132 -1 O VAL B 131 N PHE B 36 SHEET 4 AA2 5 HIS B 112 ARG B 119 -1 N HIS B 112 O ARG B 132 SHEET 5 AA2 5 LEU B 88 ASN B 91 -1 N LEU B 88 O SER B 115 CISPEP 1 PHE A 45 PRO A 46 0 -3.25 CISPEP 2 PHE B 45 PRO B 46 0 -2.17 SITE 1 AC1 15 SER A 38 GLY A 40 PHE A 54 SER A 56 SITE 2 AC1 15 TYR A 58 TRP A 62 TYR A 66 ASP A 75 SITE 3 AC1 15 ILE A 77 VAL A 78 GLY A 81 PHE A 101 SITE 4 AC1 15 TRP A 102 ILE A 125 MET A 127 SITE 1 AC2 17 SER B 38 GLY B 40 PHE B 54 SER B 56 SITE 2 AC2 17 TYR B 58 TRP B 62 TYR B 66 ASP B 75 SITE 3 AC2 17 ILE B 77 VAL B 78 GLY B 81 LEU B 82 SITE 4 AC2 17 TRP B 102 ILE B 110 ILE B 125 MET B 127 SITE 5 AC2 17 SER B 129 CRYST1 94.120 94.120 105.680 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010625 0.006134 0.000000 0.00000 SCALE2 0.000000 0.012268 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009463 0.00000