HEADER TRANSCRIPTION/INHIBITOR 08-FEB-18 6CD4 TITLE CRYSTAL STRUCTURE OF THE FIRST BROMODOMAIN OF HUMAN BRD4 IN COMPLEX TITLE 2 WITH THE INHIBITOR JWG046 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BROMODOMAIN-CONTAINING PROTEIN 4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 44-168; COMPND 5 SYNONYM: PROTEIN HUNK1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BRD4, HUNK1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS KINASE, INHIBITOR, BRD4, TRANSCRIPTION, TRANSCRIPTION-INHIBITOR KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR X.XU,S.C.BLACKLOW REVDAT 6 04-OCT-23 6CD4 1 REMARK REVDAT 5 01-JAN-20 6CD4 1 REMARK REVDAT 4 17-APR-19 6CD4 1 REMARK REVDAT 3 20-FEB-19 6CD4 1 REMARK REVDAT 2 03-OCT-18 6CD4 1 JRNL REVDAT 1 29-AUG-18 6CD4 0 JRNL AUTH J.WANG,T.ERAZO,F.M.FERGUSON,D.L.BUCKLEY,N.GOMEZ, JRNL AUTH 2 P.MUNOZ-GUARDIOLA,N.DIEGUEZ-MARTINEZ,X.DENG,M.HAO, JRNL AUTH 3 W.MASSEFSKI,O.FEDOROV,N.K.OFFEI-ADDO,P.M.PARK,L.DAI, JRNL AUTH 4 A.DIBONA,K.BECHT,N.D.KIM,M.R.MCKEOWN,J.M.ROBERTS,J.ZHANG, JRNL AUTH 5 T.SIM,D.R.ALESSI,J.E.BRADNER,J.M.LIZCANO,S.C.BLACKLOW,J.QI, JRNL AUTH 6 X.XU,N.S.GRAY JRNL TITL STRUCTURAL AND ATROPISOMERIC FACTORS GOVERNING THE JRNL TITL 2 SELECTIVITY OF PYRIMIDO-BENZODIAZIPINONES AS INHIBITORS OF JRNL TITL 3 KINASES AND BROMODOMAINS. JRNL REF ACS CHEM. BIOL. V. 13 2438 2018 JRNL REFN ESSN 1554-8937 JRNL PMID 30102854 JRNL DOI 10.1021/ACSCHEMBIO.7B00638 REMARK 2 REMARK 2 RESOLUTION. 1.23 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.23 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.09 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 3 NUMBER OF REFLECTIONS : 35909 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.168 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1794 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.1081 - 2.8909 0.98 2853 159 0.1642 0.1776 REMARK 3 2 2.8909 - 2.2947 0.98 2721 161 0.1446 0.1664 REMARK 3 3 2.2947 - 2.0046 0.99 2717 155 0.1321 0.1367 REMARK 3 4 2.0046 - 1.8214 0.99 2715 128 0.1414 0.1369 REMARK 3 5 1.8214 - 1.6908 0.99 2710 144 0.1485 0.1454 REMARK 3 6 1.6908 - 1.5911 0.99 2713 134 0.1476 0.1715 REMARK 3 7 1.5911 - 1.5114 1.00 2713 135 0.1483 0.1478 REMARK 3 8 1.5114 - 1.4456 1.00 2708 136 0.1565 0.1779 REMARK 3 9 1.4456 - 1.3900 1.00 2691 128 0.1740 0.1770 REMARK 3 10 1.3900 - 1.3420 1.00 2700 134 0.1847 0.2168 REMARK 3 11 1.3420 - 1.3000 1.00 2703 149 0.1985 0.2033 REMARK 3 12 1.3000 - 1.2629 0.91 2437 127 0.2459 0.2643 REMARK 3 13 1.2629 - 1.2296 0.65 1734 104 0.3209 0.3507 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.110 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.060 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1104 REMARK 3 ANGLE : 1.124 1508 REMARK 3 CHIRALITY : 0.068 160 REMARK 3 PLANARITY : 0.009 194 REMARK 3 DIHEDRAL : 16.238 419 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 43 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.1043 -11.9323 -20.1617 REMARK 3 T TENSOR REMARK 3 T11: 0.1868 T22: 0.1808 REMARK 3 T33: 0.1752 T12: -0.0134 REMARK 3 T13: 0.0172 T23: -0.0249 REMARK 3 L TENSOR REMARK 3 L11: 5.7588 L22: 0.8633 REMARK 3 L33: 2.2201 L12: -0.1672 REMARK 3 L13: -3.4947 L23: 0.3717 REMARK 3 S TENSOR REMARK 3 S11: -0.1315 S12: -0.1558 S13: 0.1181 REMARK 3 S21: 0.4647 S22: 0.1406 S23: -0.0074 REMARK 3 S31: -0.1870 S32: 0.2868 S33: 0.0260 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 48 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.3380 -5.8898 -31.0356 REMARK 3 T TENSOR REMARK 3 T11: 0.1620 T22: 0.1784 REMARK 3 T33: 0.1623 T12: -0.0085 REMARK 3 T13: 0.0109 T23: -0.0188 REMARK 3 L TENSOR REMARK 3 L11: 1.5732 L22: 0.5547 REMARK 3 L33: 0.9597 L12: 0.2930 REMARK 3 L13: 0.6363 L23: -0.3167 REMARK 3 S TENSOR REMARK 3 S11: -0.0475 S12: 0.1890 S13: -0.0994 REMARK 3 S21: -0.0999 S22: -0.0041 S23: -0.0239 REMARK 3 S31: -0.0138 S32: 0.1287 S33: 0.0557 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 61 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.3136 -2.3716 -20.8051 REMARK 3 T TENSOR REMARK 3 T11: 0.1244 T22: 0.1382 REMARK 3 T33: 0.1594 T12: 0.0086 REMARK 3 T13: 0.0101 T23: -0.0126 REMARK 3 L TENSOR REMARK 3 L11: 2.3764 L22: 2.1383 REMARK 3 L33: 3.2795 L12: -0.4861 REMARK 3 L13: 1.1323 L23: 1.2568 REMARK 3 S TENSOR REMARK 3 S11: -0.0591 S12: -0.0496 S13: -0.0577 REMARK 3 S21: -0.0784 S22: -0.0014 S23: 0.0309 REMARK 3 S31: 0.0229 S32: -0.2048 S33: 0.1581 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 69 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.7027 -2.5241 -12.1763 REMARK 3 T TENSOR REMARK 3 T11: 0.1642 T22: 0.1668 REMARK 3 T33: 0.1539 T12: 0.0264 REMARK 3 T13: -0.0058 T23: -0.0054 REMARK 3 L TENSOR REMARK 3 L11: 3.9168 L22: 1.1196 REMARK 3 L33: 2.0804 L12: -0.1162 REMARK 3 L13: 1.5409 L23: 0.1494 REMARK 3 S TENSOR REMARK 3 S11: -0.0811 S12: -0.1468 S13: 0.0821 REMARK 3 S21: 0.0335 S22: 0.0665 S23: 0.0483 REMARK 3 S31: -0.2721 S32: -0.3830 S33: -0.0246 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 76 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.4060 -5.8109 -4.8169 REMARK 3 T TENSOR REMARK 3 T11: 0.1918 T22: 0.1642 REMARK 3 T33: 0.1380 T12: -0.0109 REMARK 3 T13: 0.0034 T23: -0.0225 REMARK 3 L TENSOR REMARK 3 L11: 2.1865 L22: 2.0011 REMARK 3 L33: 1.5364 L12: -0.6036 REMARK 3 L13: 0.5766 L23: -0.4984 REMARK 3 S TENSOR REMARK 3 S11: -0.0694 S12: -0.3461 S13: 0.0029 REMARK 3 S21: 0.2726 S22: 0.0472 S23: 0.0676 REMARK 3 S31: -0.0755 S32: 0.0375 S33: -0.0124 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 84 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.2067 -14.7736 -13.6407 REMARK 3 T TENSOR REMARK 3 T11: 0.1361 T22: 0.2017 REMARK 3 T33: 0.1308 T12: 0.0111 REMARK 3 T13: -0.0086 T23: -0.0034 REMARK 3 L TENSOR REMARK 3 L11: 1.4392 L22: 1.9519 REMARK 3 L33: 1.5931 L12: -0.2389 REMARK 3 L13: -0.7339 L23: 0.7488 REMARK 3 S TENSOR REMARK 3 S11: -0.0516 S12: -0.2573 S13: -0.0847 REMARK 3 S21: 0.1400 S22: 0.1530 S23: -0.0934 REMARK 3 S31: 0.0947 S32: 0.3090 S33: -0.0777 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 107 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.7516 -3.8321 -20.2195 REMARK 3 T TENSOR REMARK 3 T11: 0.1455 T22: 0.1288 REMARK 3 T33: 0.1366 T12: -0.0080 REMARK 3 T13: 0.0130 T23: -0.0017 REMARK 3 L TENSOR REMARK 3 L11: 1.6819 L22: 1.7464 REMARK 3 L33: 2.7627 L12: -0.8515 REMARK 3 L13: 0.4250 L23: -0.7963 REMARK 3 S TENSOR REMARK 3 S11: -0.0006 S12: -0.1274 S13: 0.1874 REMARK 3 S21: 0.1702 S22: 0.0079 S23: -0.0868 REMARK 3 S31: -0.2869 S32: 0.0304 S33: -0.0467 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 116 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.8063 -6.4184 -28.6573 REMARK 3 T TENSOR REMARK 3 T11: 0.1310 T22: 0.1414 REMARK 3 T33: 0.1443 T12: 0.0107 REMARK 3 T13: -0.0077 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 1.4623 L22: 0.8386 REMARK 3 L33: 1.3134 L12: 0.2865 REMARK 3 L13: 0.5216 L23: 0.2438 REMARK 3 S TENSOR REMARK 3 S11: 0.0650 S12: 0.0967 S13: -0.0327 REMARK 3 S21: -0.0872 S22: 0.0092 S23: 0.0274 REMARK 3 S31: -0.0616 S32: -0.1025 S33: -0.0526 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 122 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.8797 -15.8056 -15.6367 REMARK 3 T TENSOR REMARK 3 T11: 0.1154 T22: 0.1188 REMARK 3 T33: 0.1351 T12: -0.0129 REMARK 3 T13: 0.0021 T23: 0.0075 REMARK 3 L TENSOR REMARK 3 L11: 0.9909 L22: 1.7465 REMARK 3 L33: 1.7449 L12: -0.7174 REMARK 3 L13: 0.6307 L23: -0.9679 REMARK 3 S TENSOR REMARK 3 S11: 0.0455 S12: -0.0442 S13: -0.0333 REMARK 3 S21: 0.0499 S22: -0.0084 S23: 0.0539 REMARK 3 S31: -0.0140 S32: -0.0167 S33: -0.0374 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 140 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.1368 -21.3583 -1.5917 REMARK 3 T TENSOR REMARK 3 T11: 0.2386 T22: 0.1790 REMARK 3 T33: 0.1716 T12: -0.0429 REMARK 3 T13: 0.0092 T23: 0.0289 REMARK 3 L TENSOR REMARK 3 L11: 1.5062 L22: 3.2728 REMARK 3 L33: 4.1749 L12: 1.7338 REMARK 3 L13: -0.3770 L23: -0.9663 REMARK 3 S TENSOR REMARK 3 S11: -0.0624 S12: -0.2558 S13: -0.0798 REMARK 3 S21: 0.4249 S22: -0.1968 S23: -0.0508 REMARK 3 S31: 0.2223 S32: 0.2505 S33: 0.1884 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 145 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.1636 -11.4663 -8.7934 REMARK 3 T TENSOR REMARK 3 T11: 0.1427 T22: 0.1425 REMARK 3 T33: 0.1613 T12: -0.0136 REMARK 3 T13: 0.0316 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 4.6439 L22: 2.1954 REMARK 3 L33: 4.2973 L12: -1.6233 REMARK 3 L13: 2.2933 L23: -1.3106 REMARK 3 S TENSOR REMARK 3 S11: 0.1125 S12: -0.1403 S13: -0.3223 REMARK 3 S21: 0.1269 S22: 0.0895 S23: 0.2239 REMARK 3 S31: 0.0606 S32: -0.4139 S33: -0.1734 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6CD4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1000232565. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35971 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.230 REMARK 200 RESOLUTION RANGE LOW (A) : 56.620 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.04300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.23 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.25 REMARK 200 COMPLETENESS FOR SHELL (%) : 60.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.30 REMARK 200 R MERGE FOR SHELL (I) : 0.68900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4WIV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM SODIUM NITRATE, 5% ETHYLENE REMARK 280 GLYCOL, 18% (W/V) PEG3350, VAPOR DIFFUSION, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.57850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.30900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.74100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 28.30900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.57850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 25.74100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 42 REMARK 465 GLU A 167 REMARK 465 GLU A 168 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 72 CG CD CE NZ REMARK 470 LYS A 76 CG CD CE NZ REMARK 470 LYS A 91 CG CD CE NZ REMARK 470 LYS A 155 CG CD CE NZ REMARK 470 GLU A 163 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 436 O HOH A 444 1.83 REMARK 500 O HOH A 420 O HOH A 423 1.86 REMARK 500 O HOH A 332 O HOH A 428 1.90 REMARK 500 O HOH A 418 O HOH A 427 2.08 REMARK 500 O HOH A 378 O HOH A 419 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EX1 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 204 DBREF 6CD4 A 42 168 UNP O60885 BRD4_HUMAN 42 168 SEQRES 1 A 127 SER THR ASN PRO PRO PRO PRO GLU THR SER ASN PRO ASN SEQRES 2 A 127 LYS PRO LYS ARG GLN THR ASN GLN LEU GLN TYR LEU LEU SEQRES 3 A 127 ARG VAL VAL LEU LYS THR LEU TRP LYS HIS GLN PHE ALA SEQRES 4 A 127 TRP PRO PHE GLN GLN PRO VAL ASP ALA VAL LYS LEU ASN SEQRES 5 A 127 LEU PRO ASP TYR TYR LYS ILE ILE LYS THR PRO MET ASP SEQRES 6 A 127 MET GLY THR ILE LYS LYS ARG LEU GLU ASN ASN TYR TYR SEQRES 7 A 127 TRP ASN ALA GLN GLU CYS ILE GLN ASP PHE ASN THR MET SEQRES 8 A 127 PHE THR ASN CYS TYR ILE TYR ASN LYS PRO GLY ASP ASP SEQRES 9 A 127 ILE VAL LEU MET ALA GLU ALA LEU GLU LYS LEU PHE LEU SEQRES 10 A 127 GLN LYS ILE ASN GLU LEU PRO THR GLU GLU HET EX1 A 201 86 HET EDO A 202 10 HET EDO A 203 10 HET EDO A 204 10 HETNAM EX1 2-({2-METHOXY-4-[4-(4-METHYLPIPERAZIN-1-YL)PIPERIDINE- HETNAM 2 EX1 1-CARBONYL]PHENYL}AMINO)-5-METHYL-11-(PROPAN-2-YL)-5, HETNAM 3 EX1 11-DIHYDRO-6H-PYRIMIDO[4,5-B][1,4]BENZODIAZEPIN-6-ONE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EX1 C33 H42 N8 O3 FORMUL 3 EDO 3(C2 H6 O2) FORMUL 6 HOH *151(H2 O) HELIX 1 AA1 THR A 60 VAL A 69 1 10 HELIX 2 AA2 VAL A 69 LYS A 76 1 8 HELIX 3 AA3 ALA A 80 GLN A 84 5 5 HELIX 4 AA4 ASP A 96 ILE A 101 1 6 HELIX 5 AA5 ASP A 106 ASN A 116 1 11 HELIX 6 AA6 ASN A 121 ASN A 140 1 20 HELIX 7 AA7 ASP A 144 ASN A 162 1 19 SITE 1 AC1 14 TRP A 81 PRO A 82 PHE A 83 LEU A 94 SITE 2 AC1 14 GLU A 115 ASN A 116 TYR A 139 ASN A 140 SITE 3 AC1 14 ILE A 146 EDO A 204 HOH A 317 HOH A 329 SITE 4 AC1 14 HOH A 370 HOH A 412 SITE 1 AC2 5 SER A 51 ASN A 52 LYS A 57 TYR A 118 SITE 2 AC2 5 HOH A 335 SITE 1 AC3 6 ILE A 100 ILE A 101 LYS A 102 THR A 103 SITE 2 AC3 6 ASN A 135 HOH A 315 SITE 1 AC4 3 GLU A 115 ASN A 116 EX1 A 201 CRYST1 43.157 51.482 56.618 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023171 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019424 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017662 0.00000