HEADER VIRAL PROTEIN 14-FEB-18 6CFG TITLE CRYSTAL STRUCTURE OF THE A/VIETNAM/1203/2004 (H5N1) INFLUENZA VIRUS TITLE 2 HEMAGGLUTININ IN COMPLEX WITH SMALL MOLECULE JNJ4796 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMAGGLUTININ; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: HEMAGGLUTININ; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS (A/VIET NAM/1203/2004(H5N1)); SOURCE 3 ORGANISM_TAXID: 284218; SOURCE 4 STRAIN: A/VIETNAM/1203/2004(H5N1); SOURCE 5 GENE: HA; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS (A/VIET NAM/1203/2004(H5N1)); SOURCE 12 ORGANISM_TAXID: 284218; SOURCE 13 STRAIN: A/VIETNAM/1203/2004(H5N1); SOURCE 14 GENE: HA; SOURCE 15 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 16 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS GLYCOPROTEIN, ECTODOMAIN, N-GLYCOSYLATION, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.U.KADAM,I.A.WILSON REVDAT 7 23-OCT-24 6CFG 1 REMARK REVDAT 6 04-OCT-23 6CFG 1 HETSYN REVDAT 5 29-JUL-20 6CFG 1 COMPND REMARK HETNAM LINK REVDAT 5 2 1 SITE ATOM REVDAT 4 18-DEC-19 6CFG 1 REMARK REVDAT 3 10-APR-19 6CFG 1 REMARK REVDAT 2 27-MAR-19 6CFG 1 JRNL REVDAT 1 13-FEB-19 6CFG 0 JRNL AUTH M.J.P.VAN DONGEN,R.U.KADAM,J.JURASZEK,E.LAWSON, JRNL AUTH 2 B.BRANDENBURG,F.SCHMITZ,W.B.G.SCHEPENS,B.STOOPS, JRNL AUTH 3 H.A.VAN DIEPEN,M.JONGENEELEN,C.TANG,J.VERMOND, JRNL AUTH 4 A.VAN EIJGEN-OBREGOSO REAL,S.BLOKLAND,D.GARG,W.YU,W.GOUTIER, JRNL AUTH 5 E.LANCKACKER,J.M.KLAP,D.C.G.PEETERS,J.WU,C.BUYCK, JRNL AUTH 6 T.H.M.JONCKERS,D.ROYMANS,P.ROEVENS,R.VOGELS,W.KOUDSTAAL, JRNL AUTH 7 R.H.E.FRIESEN,P.RABOISSON,D.DHANAK,J.GOUDSMIT,I.A.WILSON JRNL TITL A SMALL-MOLECULE FUSION INHIBITOR OF INFLUENZA VIRUS IS JRNL TITL 2 ORALLY ACTIVE IN MICE. JRNL REF SCIENCE V. 363 2019 JRNL REFN ESSN 1095-9203 JRNL PMID 30846569 JRNL DOI 10.1126/SCIENCE.AAR6221 REMARK 2 REMARK 2 RESOLUTION. 2.32 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.32 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 39877 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 2036 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.4052 - 5.7166 1.00 2723 136 0.1872 0.2425 REMARK 3 2 5.7166 - 4.5394 1.00 2602 154 0.1626 0.1947 REMARK 3 3 4.5394 - 3.9662 1.00 2566 136 0.1501 0.1696 REMARK 3 4 3.9662 - 3.6038 1.00 2567 131 0.1796 0.2032 REMARK 3 5 3.6038 - 3.3456 1.00 2538 138 0.2248 0.2608 REMARK 3 6 3.3456 - 3.1484 1.00 2529 137 0.2258 0.2258 REMARK 3 7 3.1484 - 2.9908 1.00 2562 109 0.2307 0.2700 REMARK 3 8 2.9908 - 2.8607 1.00 2483 160 0.2544 0.3785 REMARK 3 9 2.8607 - 2.7506 1.00 2497 151 0.2439 0.2859 REMARK 3 10 2.7506 - 2.6557 1.00 2522 138 0.2423 0.2581 REMARK 3 11 2.6557 - 2.5726 1.00 2520 117 0.2540 0.3062 REMARK 3 12 2.5726 - 2.4991 1.00 2470 152 0.2640 0.3200 REMARK 3 13 2.4991 - 2.4333 1.00 2486 145 0.2917 0.3755 REMARK 3 14 2.4333 - 2.3740 0.98 2449 133 0.3052 0.3409 REMARK 3 15 2.3740 - 2.3200 0.92 2327 99 0.3352 0.3375 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.330 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 46.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4249 REMARK 3 ANGLE : 0.894 5767 REMARK 3 CHIRALITY : 0.052 618 REMARK 3 PLANARITY : 0.005 748 REMARK 3 DIHEDRAL : 13.098 2550 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -0.4849 -41.3492 23.4752 REMARK 3 T TENSOR REMARK 3 T11: 0.5001 T22: 0.3371 REMARK 3 T33: 0.4578 T12: -0.0883 REMARK 3 T13: -0.0751 T23: 0.0399 REMARK 3 L TENSOR REMARK 3 L11: 0.6349 L22: 0.5795 REMARK 3 L33: 4.2560 L12: -0.1232 REMARK 3 L13: 0.1848 L23: -0.3189 REMARK 3 S TENSOR REMARK 3 S11: -0.0734 S12: 0.2484 S13: 0.1336 REMARK 3 S21: -0.1582 S22: -0.0300 S23: 0.0115 REMARK 3 S31: -0.8180 S32: 0.3608 S33: 0.0916 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6CFG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1000232661. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-MAY-16 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40297 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.320 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 9.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08000 REMARK 200 FOR THE DATA SET : 26.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.32 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.5 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.82000 REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4FQI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LITHIUM SULFATE, 20% W/V REMARK 280 PEG3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 51.09850 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 29.50173 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 151.35100 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 51.09850 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 29.50173 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 151.35100 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 51.09850 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 29.50173 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 151.35100 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 51.09850 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 29.50173 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 151.35100 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 51.09850 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 29.50173 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 151.35100 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 51.09850 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 29.50173 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 151.35100 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 59.00347 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 302.70200 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 59.00347 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 302.70200 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 59.00347 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 302.70200 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 59.00347 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 302.70200 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 59.00347 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 302.70200 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 59.00347 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 302.70200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 33060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 63640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -90.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -51.09850 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -88.50520 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 51.09850 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 -88.50520 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 335 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 7 REMARK 465 GLN A 325 REMARK 465 ARG A 326 REMARK 465 GLU A 327 REMARK 465 ARG A 328 REMARK 465 ARG A 329 REMARK 465 ARG A 330 REMARK 465 LYS A 331 REMARK 465 LYS A 332 REMARK 465 ARG A 333 REMARK 465 ARG B 177 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 167 OD1 ASN A 244 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 62 -116.44 56.64 REMARK 500 ASP A 96 -124.74 -122.00 REMARK 500 CYS A 139 66.94 -118.25 REMARK 500 SER A 146 -155.75 -151.06 REMARK 500 GLN A 196 -58.48 62.59 REMARK 500 THR A 206 -155.89 -126.25 REMARK 500 GLU A 255 -53.87 -128.62 REMARK 500 GLU A 273 -169.80 -121.20 REMARK 500 THR B 61 65.02 -101.91 REMARK 500 ARG B 127 -135.27 58.43 REMARK 500 REMARK 500 REMARK: NULL DBREF 6CFG A 11 333 UNP Q5EP31 Q5EP31_9INFA 17 346 DBREF 6CFG B 1 174 UNP Q6DQ18 HEMA_I02A6 339 512 SEQADV 6CFG ALA A 7 UNP Q5EP31 EXPRESSION TAG SEQADV 6CFG ASP A 8 UNP Q5EP31 EXPRESSION TAG SEQADV 6CFG PRO A 9 UNP Q5EP31 EXPRESSION TAG SEQADV 6CFG GLY A 10 UNP Q5EP31 EXPRESSION TAG SEQADV 6CFG SER B 175 UNP Q6DQ18 EXPRESSION TAG SEQADV 6CFG GLY B 176 UNP Q6DQ18 EXPRESSION TAG SEQADV 6CFG ARG B 177 UNP Q6DQ18 EXPRESSION TAG SEQRES 1 A 334 ALA ASP PRO GLY ASP GLN ILE CYS ILE GLY TYR HIS ALA SEQRES 2 A 334 ASN ASN SER THR GLU GLN VAL ASP THR ILE MET GLU LYS SEQRES 3 A 334 ASN VAL THR VAL THR HIS ALA GLN ASP ILE LEU GLU LYS SEQRES 4 A 334 LYS HIS ASN GLY LYS LEU CYS ASP LEU ASP GLY VAL LYS SEQRES 5 A 334 PRO LEU ILE LEU ARG ASP CYS SER VAL ALA GLY TRP LEU SEQRES 6 A 334 LEU GLY ASN PRO MET CYS ASP GLU PHE ILE ASN VAL PRO SEQRES 7 A 334 GLU TRP SER TYR ILE VAL GLU LYS ALA ASN PRO VAL ASN SEQRES 8 A 334 ASP LEU CYS TYR PRO GLY ASP PHE ASN ASP TYR GLU GLU SEQRES 9 A 334 LEU LYS HIS LEU LEU SER ARG ILE ASN HIS PHE GLU LYS SEQRES 10 A 334 ILE GLN ILE ILE PRO LYS SER SER TRP SER SER HIS GLU SEQRES 11 A 334 ALA SER LEU GLY VAL SER SER ALA CYS PRO TYR GLN GLY SEQRES 12 A 334 LYS SER SER PHE PHE ARG ASN VAL VAL TRP LEU ILE LYS SEQRES 13 A 334 LYS ASN SER THR TYR PRO THR ILE LYS ARG SER TYR ASN SEQRES 14 A 334 ASN THR ASN GLN GLU ASP LEU LEU VAL LEU TRP GLY ILE SEQRES 15 A 334 HIS HIS PRO ASN ASP ALA ALA GLU GLN THR LYS LEU TYR SEQRES 16 A 334 GLN ASN PRO THR THR TYR ILE SER VAL GLY THR SER THR SEQRES 17 A 334 LEU ASN GLN ARG LEU VAL PRO ARG ILE ALA THR ARG SER SEQRES 18 A 334 LYS VAL ASN GLY GLN SER GLY ARG MET GLU PHE PHE TRP SEQRES 19 A 334 THR ILE LEU LYS PRO ASN ASP ALA ILE ASN PHE GLU SER SEQRES 20 A 334 ASN GLY ASN PHE ILE ALA PRO GLU TYR ALA TYR LYS ILE SEQRES 21 A 334 VAL LYS LYS GLY ASP SER THR ILE MET LYS SER GLU LEU SEQRES 22 A 334 GLU TYR GLY ASN CYS ASN THR LYS CYS GLN THR PRO MET SEQRES 23 A 334 GLY ALA ILE ASN SER SER MET PRO PHE HIS ASN ILE HIS SEQRES 24 A 334 PRO LEU THR ILE GLY GLU CYS PRO LYS TYR VAL LYS SER SEQRES 25 A 334 ASN ARG LEU VAL LEU ALA THR GLY LEU ARG ASN SER PRO SEQRES 26 A 334 GLN ARG GLU ARG ARG ARG LYS LYS ARG SEQRES 1 B 177 GLY LEU PHE GLY ALA ILE ALA GLY PHE ILE GLU GLY GLY SEQRES 2 B 177 TRP GLN GLY MET VAL ASP GLY TRP TYR GLY TYR HIS HIS SEQRES 3 B 177 SER ASN GLU GLN GLY SER GLY TYR ALA ALA ASP LYS GLU SEQRES 4 B 177 SER THR GLN LYS ALA ILE ASP GLY VAL THR ASN LYS VAL SEQRES 5 B 177 ASN SER ILE ILE ASP LYS MET ASN THR GLN PHE GLU ALA SEQRES 6 B 177 VAL GLY ARG GLU PHE ASN ASN LEU GLU ARG ARG ILE GLU SEQRES 7 B 177 ASN LEU ASN LYS LYS MET GLU ASP GLY PHE LEU ASP VAL SEQRES 8 B 177 TRP THR TYR ASN ALA GLU LEU LEU VAL LEU MET GLU ASN SEQRES 9 B 177 GLU ARG THR LEU ASP PHE HIS ASP SER ASN VAL LYS ASN SEQRES 10 B 177 LEU TYR ASP LYS VAL ARG LEU GLN LEU ARG ASP ASN ALA SEQRES 11 B 177 LYS GLU LEU GLY ASN GLY CYS PHE GLU PHE TYR HIS LYS SEQRES 12 B 177 CYS ASP ASN GLU CYS MET GLU SER VAL ARG ASN GLY THR SEQRES 13 B 177 TYR ASP TYR PRO GLN TYR SER GLU GLU ALA ARG LEU LYS SEQRES 14 B 177 ARG GLU GLU ILE SER SER GLY ARG HET NAG C 1 14 HET NAG C 2 14 HET NAG D 1 14 HET NAG D 2 14 HET NAG A 403 14 HET NAG A 404 14 HET EZ7 B 201 40 HET PEG B 204 7 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM EZ7 N-[2-(2-{4-[(R)-(2-METHYL-2H-TETRAZOL-5-YL)(PHENYL) HETNAM 2 EZ7 METHYL]PIPERAZINE-1-CARBONYL}PYRIDIN-4-YL)-1,3- HETNAM 3 EZ7 BENZOXAZOL-5-YL]ACETAMIDE HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 NAG 6(C8 H15 N O6) FORMUL 7 EZ7 C28 H27 N9 O3 FORMUL 8 PEG C4 H10 O3 FORMUL 9 HOH *93(H2 O) HELIX 1 AA1 SER A 65 GLY A 72 1 8 HELIX 2 AA2 ASN A 73 ILE A 80 5 8 HELIX 3 AA3 ASP A 104 SER A 113 1 10 HELIX 4 AA4 PRO A 125 TRP A 127 5 5 HELIX 5 AA5 ASP A 187 GLN A 196 1 10 HELIX 6 AA6 ASP B 37 MET B 59 1 23 HELIX 7 AA7 GLU B 74 ARG B 127 1 54 HELIX 8 AA8 ASP B 145 ASN B 154 1 10 HELIX 9 AA9 ASP B 158 GLY B 176 1 19 SHEET 1 AA1 5 GLY B 31 ALA B 36 0 SHEET 2 AA1 5 TYR B 22 ASN B 28 -1 N TYR B 24 O ALA B 35 SHEET 3 AA1 5 GLN A 12 TYR A 17 -1 N CYS A 14 O HIS B 25 SHEET 4 AA1 5 CYS B 137 PHE B 140 -1 O PHE B 138 N ILE A 13 SHEET 5 AA1 5 ALA B 130 GLU B 132 -1 N LYS B 131 O GLU B 139 SHEET 1 AA2 2 GLN A 25 VAL A 26 0 SHEET 2 AA2 2 VAL A 34 THR A 35 -1 O VAL A 34 N VAL A 26 SHEET 1 AA3 2 ALA A 39 ASP A 41 0 SHEET 2 AA3 2 VAL A 315 ALA A 317 -1 O LEU A 316 N GLN A 40 SHEET 1 AA4 3 LEU A 43 GLU A 44 0 SHEET 2 AA4 3 PHE A 294 HIS A 295 1 O PHE A 294 N GLU A 44 SHEET 3 AA4 3 LYS A 307 TYR A 308 1 O LYS A 307 N HIS A 295 SHEET 1 AA5 2 LEU A 51 LEU A 54 0 SHEET 2 AA5 2 TYR A 274 THR A 279 1 O CYS A 277 N ASP A 53 SHEET 1 AA6 3 LEU A 59 ILE A 60 0 SHEET 2 AA6 3 ILE A 87 GLU A 89 1 O VAL A 88 N LEU A 59 SHEET 3 AA6 3 ILE A 267 LYS A 269 1 O MET A 268 N ILE A 87 SHEET 1 AA7 5 GLY A 100 PHE A 102 0 SHEET 2 AA7 5 ARG A 229 LEU A 237 1 O PHE A 232 N ASP A 101 SHEET 3 AA7 5 LEU A 176 HIS A 184 -1 N HIS A 184 O ARG A 229 SHEET 4 AA7 5 TYR A 256 LYS A 262 -1 O TYR A 258 N LEU A 177 SHEET 5 AA7 5 ILE A 115 GLN A 122 -1 N ILE A 121 O ALA A 257 SHEET 1 AA8 5 GLY A 100 PHE A 102 0 SHEET 2 AA8 5 ARG A 229 LEU A 237 1 O PHE A 232 N ASP A 101 SHEET 3 AA8 5 LEU A 176 HIS A 184 -1 N HIS A 184 O ARG A 229 SHEET 4 AA8 5 PHE A 251 PRO A 254 -1 O ILE A 252 N GLY A 181 SHEET 5 AA8 5 VAL A 151 TRP A 153 -1 N VAL A 152 O ALA A 253 SHEET 1 AA9 2 SER A 136 TYR A 141 0 SHEET 2 AA9 2 LYS A 144 SER A 146 -1 O LYS A 144 N TYR A 141 SHEET 1 AB1 4 ILE A 164 ASN A 169 0 SHEET 2 AB1 4 ALA A 242 SER A 247 -1 O SER A 247 N ILE A 164 SHEET 3 AB1 4 ILE A 202 GLY A 205 -1 N SER A 203 O GLU A 246 SHEET 4 AB1 4 ASN A 210 LEU A 213 -1 O GLN A 211 N VAL A 204 SHEET 1 AB2 3 GLY A 286 ALA A 287 0 SHEET 2 AB2 3 CYS A 281 THR A 283 -1 N THR A 283 O GLY A 286 SHEET 3 AB2 3 ILE A 302 GLY A 303 -1 O ILE A 302 N GLN A 282 SSBOND 1 CYS A 14 CYS B 137 1555 1555 2.05 SSBOND 2 CYS A 52 CYS A 277 1555 1555 2.05 SSBOND 3 CYS A 64 CYS A 76 1555 1555 2.05 SSBOND 4 CYS A 97 CYS A 139 1555 1555 2.05 SSBOND 5 CYS A 281 CYS A 305 1555 1555 2.05 SSBOND 6 CYS B 144 CYS B 148 1555 1555 2.05 LINK ND2 ASN A 33 C1 NAG A 403 1555 1555 1.45 LINK ND2 ASN A 169 C1 NAG C 1 1555 1555 1.43 LINK ND2 ASN A 289 C1 NAG A 404 1555 1555 1.45 LINK ND2 ASN B 154 C1 NAG D 1 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.43 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 CRYST1 102.197 102.197 454.053 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009785 0.005649 0.000000 0.00000 SCALE2 0.000000 0.011299 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002202 0.00000