data_6CG8 # _entry.id 6CG8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6CG8 pdb_00006cg8 10.2210/pdb6cg8/pdb WWPDB D_1000232685 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-09-26 2 'Structure model' 1 1 2018-10-17 3 'Structure model' 1 2 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 3 'Structure model' '_database_2.pdbx_DOI' 4 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6CG8 _pdbx_database_status.recvd_initial_deposition_date 2018-02-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Schumacher, M.A.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Cell _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1097-4172 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 175 _citation.language ? _citation.page_first 583 _citation.page_last ? _citation.title 'A Bacterial Chromosome Structuring Protein Binds Overtwisted DNA to Stimulate Type II Topoisomerases and Enable DNA Replication.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.cell.2018.08.029 _citation.pdbx_database_id_PubMed 30220456 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Guo, M.S.' 1 ? primary 'Haakonsen, D.L.' 2 ? primary 'Zeng, W.' 3 ? primary 'Schumacher, M.A.' 4 ? primary 'Laub, M.T.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'UPF0335 protein B7Z12_12435' 8993.409 4 ? ? 'residues 13-89' ? 2 polymer syn ;DNA (5'-D(*TP*TP*AP*AP*AP*AP*TP*TP*AP*AP*A)-3') ; 3364.261 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*TP*TP*TP*AP*AP*TP*TP*TP*TP*AP*A)-3') ; 3337.219 1 ? ? ? ? 4 water nat water 18.015 103 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no MNSTAQGQLKSIIERVERLEVEKAEIMEQIKEVYAEAKGNGFDVKVLKKVVRIRKQDRAKRQEEDAILDLYMSAIGEI MNSTAQGQLKSIIERVERLEVEKAEIMEQIKEVYAEAKGNGFDVKVLKKVVRIRKQDRAKRQEEDAILDLYMSAIGEI A,B,D,E ? 2 polydeoxyribonucleotide no no '(DT)(DT)(DA)(DA)(DA)(DA)(DT)(DT)(DA)(DA)(DA)' TTAAAATTAAA C ? 3 polydeoxyribonucleotide no no '(DT)(DT)(DT)(DA)(DA)(DT)(DT)(DT)(DT)(DA)(DA)' TTTAATTTTAA F ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASN n 1 3 SER n 1 4 THR n 1 5 ALA n 1 6 GLN n 1 7 GLY n 1 8 GLN n 1 9 LEU n 1 10 LYS n 1 11 SER n 1 12 ILE n 1 13 ILE n 1 14 GLU n 1 15 ARG n 1 16 VAL n 1 17 GLU n 1 18 ARG n 1 19 LEU n 1 20 GLU n 1 21 VAL n 1 22 GLU n 1 23 LYS n 1 24 ALA n 1 25 GLU n 1 26 ILE n 1 27 MET n 1 28 GLU n 1 29 GLN n 1 30 ILE n 1 31 LYS n 1 32 GLU n 1 33 VAL n 1 34 TYR n 1 35 ALA n 1 36 GLU n 1 37 ALA n 1 38 LYS n 1 39 GLY n 1 40 ASN n 1 41 GLY n 1 42 PHE n 1 43 ASP n 1 44 VAL n 1 45 LYS n 1 46 VAL n 1 47 LEU n 1 48 LYS n 1 49 LYS n 1 50 VAL n 1 51 VAL n 1 52 ARG n 1 53 ILE n 1 54 ARG n 1 55 LYS n 1 56 GLN n 1 57 ASP n 1 58 ARG n 1 59 ALA n 1 60 LYS n 1 61 ARG n 1 62 GLN n 1 63 GLU n 1 64 GLU n 1 65 ASP n 1 66 ALA n 1 67 ILE n 1 68 LEU n 1 69 ASP n 1 70 LEU n 1 71 TYR n 1 72 MET n 1 73 SER n 1 74 ALA n 1 75 ILE n 1 76 GLY n 1 77 GLU n 1 78 ILE n 2 1 DT n 2 2 DT n 2 3 DA n 2 4 DA n 2 5 DA n 2 6 DA n 2 7 DT n 2 8 DT n 2 9 DA n 2 10 DA n 2 11 DA n 3 1 DT n 3 2 DT n 3 3 DT n 3 4 DA n 3 5 DA n 3 6 DT n 3 7 DT n 3 8 DT n 3 9 DT n 3 10 DA n 3 11 DA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 78 _entity_src_gen.gene_src_common_name 'Caulobacter crescentus' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'B7Z12_12435, CA606_13135' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Caulobacter vibrioides' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 155892 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 11 'synthetic construct' ? 32630 ? 3 1 sample 1 11 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 12 12 MET MSE A . n A 1 2 ASN 2 13 13 ASN ASN A . n A 1 3 SER 3 14 14 SER SER A . n A 1 4 THR 4 15 15 THR THR A . n A 1 5 ALA 5 16 16 ALA ALA A . n A 1 6 GLN 6 17 17 GLN GLN A . n A 1 7 GLY 7 18 18 GLY GLY A . n A 1 8 GLN 8 19 19 GLN GLN A . n A 1 9 LEU 9 20 20 LEU LEU A . n A 1 10 LYS 10 21 21 LYS LYS A . n A 1 11 SER 11 22 22 SER SER A . n A 1 12 ILE 12 23 23 ILE ILE A . n A 1 13 ILE 13 24 24 ILE ILE A . n A 1 14 GLU 14 25 25 GLU GLU A . n A 1 15 ARG 15 26 26 ARG ARG A . n A 1 16 VAL 16 27 27 VAL VAL A . n A 1 17 GLU 17 28 28 GLU GLU A . n A 1 18 ARG 18 29 29 ARG ARG A . n A 1 19 LEU 19 30 30 LEU LEU A . n A 1 20 GLU 20 31 31 GLU GLU A . n A 1 21 VAL 21 32 32 VAL VAL A . n A 1 22 GLU 22 33 33 GLU GLU A . n A 1 23 LYS 23 34 34 LYS LYS A . n A 1 24 ALA 24 35 35 ALA ALA A . n A 1 25 GLU 25 36 36 GLU GLU A . n A 1 26 ILE 26 37 37 ILE ILE A . n A 1 27 MET 27 38 38 MET MSE A . n A 1 28 GLU 28 39 39 GLU GLU A . n A 1 29 GLN 29 40 40 GLN GLN A . n A 1 30 ILE 30 41 41 ILE ILE A . n A 1 31 LYS 31 42 42 LYS LYS A . n A 1 32 GLU 32 43 43 GLU GLU A . n A 1 33 VAL 33 44 44 VAL VAL A . n A 1 34 TYR 34 45 45 TYR TYR A . n A 1 35 ALA 35 46 46 ALA ALA A . n A 1 36 GLU 36 47 47 GLU GLU A . n A 1 37 ALA 37 48 48 ALA ALA A . n A 1 38 LYS 38 49 49 LYS LYS A . n A 1 39 GLY 39 50 50 GLY GLY A . n A 1 40 ASN 40 51 51 ASN ASN A . n A 1 41 GLY 41 52 52 GLY GLY A . n A 1 42 PHE 42 53 53 PHE PHE A . n A 1 43 ASP 43 54 54 ASP ASP A . n A 1 44 VAL 44 55 55 VAL VAL A . n A 1 45 LYS 45 56 56 LYS LYS A . n A 1 46 VAL 46 57 57 VAL VAL A . n A 1 47 LEU 47 58 58 LEU LEU A . n A 1 48 LYS 48 59 59 LYS LYS A . n A 1 49 LYS 49 60 60 LYS LYS A . n A 1 50 VAL 50 61 61 VAL VAL A . n A 1 51 VAL 51 62 62 VAL VAL A . n A 1 52 ARG 52 63 63 ARG ARG A . n A 1 53 ILE 53 64 64 ILE ILE A . n A 1 54 ARG 54 65 65 ARG ARG A . n A 1 55 LYS 55 66 66 LYS LYS A . n A 1 56 GLN 56 67 67 GLN GLN A . n A 1 57 ASP 57 68 68 ASP ASP A . n A 1 58 ARG 58 69 69 ARG ARG A . n A 1 59 ALA 59 70 70 ALA ALA A . n A 1 60 LYS 60 71 71 LYS ALA A . n A 1 61 ARG 61 72 72 ARG ARG A . n A 1 62 GLN 62 73 73 GLN GLN A . n A 1 63 GLU 63 74 74 GLU GLU A . n A 1 64 GLU 64 75 75 GLU GLU A . n A 1 65 ASP 65 76 76 ASP ASP A . n A 1 66 ALA 66 77 77 ALA ALA A . n A 1 67 ILE 67 78 78 ILE ILE A . n A 1 68 LEU 68 79 79 LEU LEU A . n A 1 69 ASP 69 80 80 ASP ASP A . n A 1 70 LEU 70 81 81 LEU LEU A . n A 1 71 TYR 71 82 82 TYR TYR A . n A 1 72 MET 72 83 83 MET MSE A . n A 1 73 SER 73 84 84 SER SER A . n A 1 74 ALA 74 85 85 ALA ALA A . n A 1 75 ILE 75 86 86 ILE ILE A . n A 1 76 GLY 76 87 87 GLY GLY A . n A 1 77 GLU 77 88 88 GLU ALA A . n A 1 78 ILE 78 89 ? ? ? A . n B 1 1 MET 1 12 12 MET MSE B . n B 1 2 ASN 2 13 13 ASN ASN B . n B 1 3 SER 3 14 14 SER SER B . n B 1 4 THR 4 15 15 THR THR B . n B 1 5 ALA 5 16 16 ALA ALA B . n B 1 6 GLN 6 17 17 GLN GLN B . n B 1 7 GLY 7 18 18 GLY GLY B . n B 1 8 GLN 8 19 19 GLN GLN B . n B 1 9 LEU 9 20 20 LEU LEU B . n B 1 10 LYS 10 21 21 LYS LYS B . n B 1 11 SER 11 22 22 SER SER B . n B 1 12 ILE 12 23 23 ILE ILE B . n B 1 13 ILE 13 24 24 ILE ILE B . n B 1 14 GLU 14 25 25 GLU GLU B . n B 1 15 ARG 15 26 26 ARG ARG B . n B 1 16 VAL 16 27 27 VAL VAL B . n B 1 17 GLU 17 28 28 GLU GLU B . n B 1 18 ARG 18 29 29 ARG ARG B . n B 1 19 LEU 19 30 30 LEU LEU B . n B 1 20 GLU 20 31 31 GLU GLU B . n B 1 21 VAL 21 32 32 VAL VAL B . n B 1 22 GLU 22 33 33 GLU GLU B . n B 1 23 LYS 23 34 34 LYS LYS B . n B 1 24 ALA 24 35 35 ALA ALA B . n B 1 25 GLU 25 36 36 GLU GLU B . n B 1 26 ILE 26 37 37 ILE ILE B . n B 1 27 MET 27 38 38 MET MSE B . n B 1 28 GLU 28 39 39 GLU GLU B . n B 1 29 GLN 29 40 40 GLN GLN B . n B 1 30 ILE 30 41 41 ILE ILE B . n B 1 31 LYS 31 42 42 LYS LYS B . n B 1 32 GLU 32 43 43 GLU GLU B . n B 1 33 VAL 33 44 44 VAL VAL B . n B 1 34 TYR 34 45 45 TYR TYR B . n B 1 35 ALA 35 46 46 ALA ALA B . n B 1 36 GLU 36 47 47 GLU GLU B . n B 1 37 ALA 37 48 48 ALA ALA B . n B 1 38 LYS 38 49 49 LYS LYS B . n B 1 39 GLY 39 50 50 GLY GLY B . n B 1 40 ASN 40 51 51 ASN ASN B . n B 1 41 GLY 41 52 52 GLY GLY B . n B 1 42 PHE 42 53 53 PHE PHE B . n B 1 43 ASP 43 54 54 ASP ASP B . n B 1 44 VAL 44 55 55 VAL VAL B . n B 1 45 LYS 45 56 56 LYS LYS B . n B 1 46 VAL 46 57 57 VAL VAL B . n B 1 47 LEU 47 58 58 LEU LEU B . n B 1 48 LYS 48 59 59 LYS LYS B . n B 1 49 LYS 49 60 60 LYS LYS B . n B 1 50 VAL 50 61 61 VAL VAL B . n B 1 51 VAL 51 62 62 VAL VAL B . n B 1 52 ARG 52 63 63 ARG ARG B . n B 1 53 ILE 53 64 64 ILE ILE B . n B 1 54 ARG 54 65 65 ARG ARG B . n B 1 55 LYS 55 66 66 LYS LYS B . n B 1 56 GLN 56 67 67 GLN GLN B . n B 1 57 ASP 57 68 68 ASP ASP B . n B 1 58 ARG 58 69 69 ARG ARG B . n B 1 59 ALA 59 70 70 ALA ALA B . n B 1 60 LYS 60 71 71 LYS ALA B . n B 1 61 ARG 61 72 72 ARG ARG B . n B 1 62 GLN 62 73 73 GLN GLN B . n B 1 63 GLU 63 74 74 GLU GLU B . n B 1 64 GLU 64 75 75 GLU GLU B . n B 1 65 ASP 65 76 76 ASP ASP B . n B 1 66 ALA 66 77 77 ALA ALA B . n B 1 67 ILE 67 78 78 ILE ILE B . n B 1 68 LEU 68 79 79 LEU LEU B . n B 1 69 ASP 69 80 80 ASP ASP B . n B 1 70 LEU 70 81 81 LEU LEU B . n B 1 71 TYR 71 82 82 TYR TYR B . n B 1 72 MET 72 83 83 MET MSE B . n B 1 73 SER 73 84 84 SER SER B . n B 1 74 ALA 74 85 85 ALA ALA B . n B 1 75 ILE 75 86 86 ILE ILE B . n B 1 76 GLY 76 87 87 GLY GLY B . n B 1 77 GLU 77 88 88 GLU GLU B . n B 1 78 ILE 78 89 ? ? ? B . n C 1 1 MET 1 12 12 MET MSE D . n C 1 2 ASN 2 13 13 ASN ASN D . n C 1 3 SER 3 14 14 SER SER D . n C 1 4 THR 4 15 15 THR THR D . n C 1 5 ALA 5 16 16 ALA ALA D . n C 1 6 GLN 6 17 17 GLN GLN D . n C 1 7 GLY 7 18 18 GLY GLY D . n C 1 8 GLN 8 19 19 GLN GLN D . n C 1 9 LEU 9 20 20 LEU LEU D . n C 1 10 LYS 10 21 21 LYS LYS D . n C 1 11 SER 11 22 22 SER SER D . n C 1 12 ILE 12 23 23 ILE ILE D . n C 1 13 ILE 13 24 24 ILE ILE D . n C 1 14 GLU 14 25 25 GLU GLU D . n C 1 15 ARG 15 26 26 ARG ARG D . n C 1 16 VAL 16 27 27 VAL VAL D . n C 1 17 GLU 17 28 28 GLU GLU D . n C 1 18 ARG 18 29 29 ARG ARG D . n C 1 19 LEU 19 30 30 LEU LEU D . n C 1 20 GLU 20 31 31 GLU GLU D . n C 1 21 VAL 21 32 32 VAL VAL D . n C 1 22 GLU 22 33 33 GLU GLU D . n C 1 23 LYS 23 34 34 LYS LYS D . n C 1 24 ALA 24 35 35 ALA ALA D . n C 1 25 GLU 25 36 36 GLU GLU D . n C 1 26 ILE 26 37 37 ILE ILE D . n C 1 27 MET 27 38 38 MET MSE D . n C 1 28 GLU 28 39 39 GLU GLU D . n C 1 29 GLN 29 40 40 GLN GLN D . n C 1 30 ILE 30 41 41 ILE ILE D . n C 1 31 LYS 31 42 42 LYS LYS D . n C 1 32 GLU 32 43 43 GLU GLU D . n C 1 33 VAL 33 44 44 VAL VAL D . n C 1 34 TYR 34 45 45 TYR TYR D . n C 1 35 ALA 35 46 46 ALA ALA D . n C 1 36 GLU 36 47 47 GLU GLU D . n C 1 37 ALA 37 48 48 ALA ALA D . n C 1 38 LYS 38 49 49 LYS LYS D . n C 1 39 GLY 39 50 50 GLY GLY D . n C 1 40 ASN 40 51 51 ASN ASN D . n C 1 41 GLY 41 52 52 GLY GLY D . n C 1 42 PHE 42 53 53 PHE PHE D . n C 1 43 ASP 43 54 54 ASP ASP D . n C 1 44 VAL 44 55 55 VAL VAL D . n C 1 45 LYS 45 56 56 LYS LYS D . n C 1 46 VAL 46 57 57 VAL VAL D . n C 1 47 LEU 47 58 58 LEU LEU D . n C 1 48 LYS 48 59 59 LYS LYS D . n C 1 49 LYS 49 60 60 LYS LYS D . n C 1 50 VAL 50 61 61 VAL VAL D . n C 1 51 VAL 51 62 62 VAL VAL D . n C 1 52 ARG 52 63 63 ARG ARG D . n C 1 53 ILE 53 64 64 ILE ILE D . n C 1 54 ARG 54 65 65 ARG ARG D . n C 1 55 LYS 55 66 66 LYS LYS D . n C 1 56 GLN 56 67 67 GLN GLN D . n C 1 57 ASP 57 68 68 ASP ASP D . n C 1 58 ARG 58 69 69 ARG ALA D . n C 1 59 ALA 59 70 70 ALA ALA D . n C 1 60 LYS 60 71 71 LYS ALA D . n C 1 61 ARG 61 72 72 ARG ARG D . n C 1 62 GLN 62 73 73 GLN GLN D . n C 1 63 GLU 63 74 74 GLU GLU D . n C 1 64 GLU 64 75 75 GLU GLU D . n C 1 65 ASP 65 76 76 ASP ASP D . n C 1 66 ALA 66 77 77 ALA ALA D . n C 1 67 ILE 67 78 78 ILE ILE D . n C 1 68 LEU 68 79 79 LEU LEU D . n C 1 69 ASP 69 80 80 ASP ASP D . n C 1 70 LEU 70 81 81 LEU LEU D . n C 1 71 TYR 71 82 82 TYR TYR D . n C 1 72 MET 72 83 83 MET MSE D . n C 1 73 SER 73 84 84 SER SER D . n C 1 74 ALA 74 85 85 ALA ALA D . n C 1 75 ILE 75 86 86 ILE ILE D . n C 1 76 GLY 76 87 87 GLY GLY D . n C 1 77 GLU 77 88 88 GLU GLU D . n C 1 78 ILE 78 89 ? ? ? D . n D 1 1 MET 1 12 12 MET MSE E . n D 1 2 ASN 2 13 13 ASN ASN E . n D 1 3 SER 3 14 14 SER SER E . n D 1 4 THR 4 15 15 THR THR E . n D 1 5 ALA 5 16 16 ALA ALA E . n D 1 6 GLN 6 17 17 GLN GLN E . n D 1 7 GLY 7 18 18 GLY GLY E . n D 1 8 GLN 8 19 19 GLN GLN E . n D 1 9 LEU 9 20 20 LEU LEU E . n D 1 10 LYS 10 21 21 LYS LYS E . n D 1 11 SER 11 22 22 SER SER E . n D 1 12 ILE 12 23 23 ILE ILE E . n D 1 13 ILE 13 24 24 ILE ILE E . n D 1 14 GLU 14 25 25 GLU GLU E . n D 1 15 ARG 15 26 26 ARG ARG E . n D 1 16 VAL 16 27 27 VAL VAL E . n D 1 17 GLU 17 28 28 GLU GLU E . n D 1 18 ARG 18 29 29 ARG ARG E . n D 1 19 LEU 19 30 30 LEU LEU E . n D 1 20 GLU 20 31 31 GLU GLU E . n D 1 21 VAL 21 32 32 VAL VAL E . n D 1 22 GLU 22 33 33 GLU GLU E . n D 1 23 LYS 23 34 34 LYS LYS E . n D 1 24 ALA 24 35 35 ALA ALA E . n D 1 25 GLU 25 36 36 GLU GLU E . n D 1 26 ILE 26 37 37 ILE ILE E . n D 1 27 MET 27 38 38 MET MSE E . n D 1 28 GLU 28 39 39 GLU GLU E . n D 1 29 GLN 29 40 40 GLN GLN E . n D 1 30 ILE 30 41 41 ILE ILE E . n D 1 31 LYS 31 42 42 LYS LYS E . n D 1 32 GLU 32 43 43 GLU GLU E . n D 1 33 VAL 33 44 44 VAL VAL E . n D 1 34 TYR 34 45 45 TYR TYR E . n D 1 35 ALA 35 46 46 ALA ALA E . n D 1 36 GLU 36 47 47 GLU GLU E . n D 1 37 ALA 37 48 48 ALA ALA E . n D 1 38 LYS 38 49 49 LYS LYS E . n D 1 39 GLY 39 50 50 GLY GLY E . n D 1 40 ASN 40 51 51 ASN ASN E . n D 1 41 GLY 41 52 52 GLY GLY E . n D 1 42 PHE 42 53 53 PHE PHE E . n D 1 43 ASP 43 54 54 ASP ASP E . n D 1 44 VAL 44 55 55 VAL VAL E . n D 1 45 LYS 45 56 56 LYS LYS E . n D 1 46 VAL 46 57 57 VAL VAL E . n D 1 47 LEU 47 58 58 LEU LEU E . n D 1 48 LYS 48 59 59 LYS LYS E . n D 1 49 LYS 49 60 60 LYS LYS E . n D 1 50 VAL 50 61 61 VAL VAL E . n D 1 51 VAL 51 62 62 VAL VAL E . n D 1 52 ARG 52 63 63 ARG ARG E . n D 1 53 ILE 53 64 64 ILE ILE E . n D 1 54 ARG 54 65 65 ARG ARG E . n D 1 55 LYS 55 66 66 LYS LYS E . n D 1 56 GLN 56 67 67 GLN GLN E . n D 1 57 ASP 57 68 68 ASP ASP E . n D 1 58 ARG 58 69 69 ARG ARG E . n D 1 59 ALA 59 70 70 ALA ALA E . n D 1 60 LYS 60 71 71 LYS ALA E . n D 1 61 ARG 61 72 72 ARG ARG E . n D 1 62 GLN 62 73 73 GLN GLN E . n D 1 63 GLU 63 74 74 GLU GLU E . n D 1 64 GLU 64 75 75 GLU GLU E . n D 1 65 ASP 65 76 76 ASP ASP E . n D 1 66 ALA 66 77 77 ALA ALA E . n D 1 67 ILE 67 78 78 ILE ILE E . n D 1 68 LEU 68 79 79 LEU LEU E . n D 1 69 ASP 69 80 80 ASP ASP E . n D 1 70 LEU 70 81 81 LEU LEU E . n D 1 71 TYR 71 82 82 TYR TYR E . n D 1 72 MET 72 83 83 MET MSE E . n D 1 73 SER 73 84 84 SER SER E . n D 1 74 ALA 74 85 85 ALA ALA E . n D 1 75 ILE 75 86 86 ILE ILE E . n D 1 76 GLY 76 87 87 GLY GLY E . n D 1 77 GLU 77 88 88 GLU GLU E . n D 1 78 ILE 78 89 89 ILE ILE E . n E 2 1 DT 1 3 3 DT THY C . n E 2 2 DT 2 4 4 DT THY C . n E 2 3 DA 3 5 5 DA ADE C . n E 2 4 DA 4 6 6 DA ADE C . n E 2 5 DA 5 7 7 DA ADE C . n E 2 6 DA 6 8 8 DA ADE C . n E 2 7 DT 7 9 9 DT THY C . n E 2 8 DT 8 10 10 DT THY C . n E 2 9 DA 9 11 11 DA ADE C . n E 2 10 DA 10 12 12 DA ADE C . n E 2 11 DA 11 13 13 DA ADE C . n F 3 1 DT 1 7 7 DT THY F . n F 3 2 DT 2 8 8 DT THY F . n F 3 3 DT 3 9 9 DT THY F . n F 3 4 DA 4 10 10 DA ADE F . n F 3 5 DA 5 11 11 DA ADE F . n F 3 6 DT 6 12 12 DT THY F . n F 3 7 DT 7 13 13 DT THY F . n F 3 8 DT 8 14 14 DT THY F . n F 3 9 DT 9 15 15 DT THY F . n F 3 10 DA 10 16 16 DA ADE F . n F 3 11 DA 11 17 17 DA ADE F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 HOH 1 101 9 HOH HOH A . G 4 HOH 2 102 97 HOH HOH A . G 4 HOH 3 103 49 HOH HOH A . G 4 HOH 4 104 69 HOH HOH A . G 4 HOH 5 105 32 HOH HOH A . G 4 HOH 6 106 63 HOH HOH A . G 4 HOH 7 107 51 HOH HOH A . G 4 HOH 8 108 23 HOH HOH A . G 4 HOH 9 109 14 HOH HOH A . G 4 HOH 10 110 21 HOH HOH A . G 4 HOH 11 111 35 HOH HOH A . G 4 HOH 12 112 31 HOH HOH A . G 4 HOH 13 113 26 HOH HOH A . G 4 HOH 14 114 86 HOH HOH A . G 4 HOH 15 115 101 HOH HOH A . G 4 HOH 16 116 59 HOH HOH A . G 4 HOH 17 117 58 HOH HOH A . G 4 HOH 18 118 68 HOH HOH A . G 4 HOH 19 119 42 HOH HOH A . G 4 HOH 20 120 47 HOH HOH A . H 4 HOH 1 101 50 HOH HOH B . H 4 HOH 2 102 4 HOH HOH B . H 4 HOH 3 103 7 HOH HOH B . H 4 HOH 4 104 75 HOH HOH B . H 4 HOH 5 105 27 HOH HOH B . H 4 HOH 6 106 82 HOH HOH B . H 4 HOH 7 107 25 HOH HOH B . H 4 HOH 8 108 1 HOH HOH B . H 4 HOH 9 109 13 HOH HOH B . H 4 HOH 10 110 80 HOH HOH B . H 4 HOH 11 111 73 HOH HOH B . H 4 HOH 12 112 57 HOH HOH B . H 4 HOH 13 113 24 HOH HOH B . H 4 HOH 14 114 10 HOH HOH B . H 4 HOH 15 115 102 HOH HOH B . H 4 HOH 16 116 53 HOH HOH B . H 4 HOH 17 117 54 HOH HOH B . H 4 HOH 18 118 44 HOH HOH B . H 4 HOH 19 119 62 HOH HOH B . H 4 HOH 20 120 92 HOH HOH B . H 4 HOH 21 121 38 HOH HOH B . H 4 HOH 22 122 81 HOH HOH B . I 4 HOH 1 101 22 HOH HOH D . I 4 HOH 2 102 18 HOH HOH D . I 4 HOH 3 103 91 HOH HOH D . I 4 HOH 4 104 8 HOH HOH D . I 4 HOH 5 105 33 HOH HOH D . I 4 HOH 6 106 5 HOH HOH D . I 4 HOH 7 107 6 HOH HOH D . I 4 HOH 8 108 2 HOH HOH D . I 4 HOH 9 109 88 HOH HOH D . I 4 HOH 10 110 43 HOH HOH D . I 4 HOH 11 111 70 HOH HOH D . I 4 HOH 12 112 20 HOH HOH D . I 4 HOH 13 113 85 HOH HOH D . I 4 HOH 14 114 65 HOH HOH D . I 4 HOH 15 115 17 HOH HOH D . I 4 HOH 16 116 56 HOH HOH D . I 4 HOH 17 117 100 HOH HOH D . I 4 HOH 18 118 12 HOH HOH D . I 4 HOH 19 119 60 HOH HOH D . I 4 HOH 20 120 95 HOH HOH D . I 4 HOH 21 121 46 HOH HOH D . I 4 HOH 22 122 64 HOH HOH D . I 4 HOH 23 123 16 HOH HOH D . I 4 HOH 24 124 98 HOH HOH D . I 4 HOH 25 125 89 HOH HOH D . I 4 HOH 26 126 84 HOH HOH D . I 4 HOH 27 127 94 HOH HOH D . I 4 HOH 28 128 90 HOH HOH D . I 4 HOH 29 129 83 HOH HOH D . J 4 HOH 1 101 99 HOH HOH E . J 4 HOH 2 102 30 HOH HOH E . J 4 HOH 3 103 104 HOH HOH E . J 4 HOH 4 104 61 HOH HOH E . J 4 HOH 5 105 78 HOH HOH E . J 4 HOH 6 106 74 HOH HOH E . J 4 HOH 7 107 19 HOH HOH E . J 4 HOH 8 108 36 HOH HOH E . J 4 HOH 9 109 93 HOH HOH E . J 4 HOH 10 110 77 HOH HOH E . J 4 HOH 11 111 87 HOH HOH E . J 4 HOH 12 112 52 HOH HOH E . J 4 HOH 13 113 39 HOH HOH E . J 4 HOH 14 114 3 HOH HOH E . J 4 HOH 15 115 79 HOH HOH E . J 4 HOH 16 116 48 HOH HOH E . J 4 HOH 17 117 11 HOH HOH E . J 4 HOH 18 118 55 HOH HOH E . J 4 HOH 19 119 28 HOH HOH E . J 4 HOH 20 120 40 HOH HOH E . J 4 HOH 21 121 34 HOH HOH E . J 4 HOH 22 122 15 HOH HOH E . J 4 HOH 23 123 29 HOH HOH E . J 4 HOH 24 124 71 HOH HOH E . J 4 HOH 25 125 66 HOH HOH E . J 4 HOH 26 126 72 HOH HOH E . J 4 HOH 27 127 103 HOH HOH E . J 4 HOH 28 128 41 HOH HOH E . J 4 HOH 29 129 76 HOH HOH E . J 4 HOH 30 130 45 HOH HOH E . K 4 HOH 1 101 67 HOH HOH F . K 4 HOH 2 102 37 HOH HOH F . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 71 ? CG ? A LYS 60 CG 2 1 Y 1 A LYS 71 ? CD ? A LYS 60 CD 3 1 Y 1 A LYS 71 ? CE ? A LYS 60 CE 4 1 Y 1 A LYS 71 ? NZ ? A LYS 60 NZ 5 1 Y 1 A GLU 88 ? CG ? A GLU 77 CG 6 1 Y 1 A GLU 88 ? CD ? A GLU 77 CD 7 1 Y 1 A GLU 88 ? OE1 ? A GLU 77 OE1 8 1 Y 1 A GLU 88 ? OE2 ? A GLU 77 OE2 9 1 Y 1 B LYS 71 ? CG ? B LYS 60 CG 10 1 Y 1 B LYS 71 ? CD ? B LYS 60 CD 11 1 Y 1 B LYS 71 ? CE ? B LYS 60 CE 12 1 Y 1 B LYS 71 ? NZ ? B LYS 60 NZ 13 1 Y 1 D ARG 69 ? CG ? C ARG 58 CG 14 1 Y 1 D ARG 69 ? CD ? C ARG 58 CD 15 1 Y 1 D ARG 69 ? NE ? C ARG 58 NE 16 1 Y 1 D ARG 69 ? CZ ? C ARG 58 CZ 17 1 Y 1 D ARG 69 ? NH1 ? C ARG 58 NH1 18 1 Y 1 D ARG 69 ? NH2 ? C ARG 58 NH2 19 1 Y 1 D LYS 71 ? CG ? C LYS 60 CG 20 1 Y 1 D LYS 71 ? CD ? C LYS 60 CD 21 1 Y 1 D LYS 71 ? CE ? C LYS 60 CE 22 1 Y 1 D LYS 71 ? NZ ? C LYS 60 NZ 23 1 Y 1 E LYS 71 ? CG ? D LYS 60 CG 24 1 Y 1 E LYS 71 ? CD ? D LYS 60 CD 25 1 Y 1 E LYS 71 ? CE ? D LYS 60 CE 26 1 Y 1 E LYS 71 ? NZ ? D LYS 60 NZ # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? MOSFLM ? ? ? . 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 2 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.6.4_486 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.24 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? AutoSol ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.180 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6CG8 _cell.details ? _cell.formula_units_Z ? _cell.length_a 95.913 _cell.length_a_esd ? _cell.length_b 35.579 _cell.length_b_esd ? _cell.length_c 115.559 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CG8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6CG8 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.29 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 46.34 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'PEG 400, CaCl2, HEPES' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 273 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 S 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-12-16 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 8.3.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 8.3.1 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6CG8 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.299 _reflns.d_resolution_low 57.8 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 32492 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.079 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 7.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.071 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.977 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.299 _reflns_shell.d_res_low 2.34 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 3035 _reflns_shell.percent_possible_all 98 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.5 _reflns_shell.pdbx_Rsym_value 0.358 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.267 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.956 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -9.0362 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.6789 _refine.aniso_B[2][2] 16.9343 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -7.8981 _refine.B_iso_max 197.700 _refine.B_iso_mean 57.2700 _refine.B_iso_min 20.570 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6CG8 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.2990 _refine.ls_d_res_low 57.7790 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 32492 _refine.ls_number_reflns_R_free 2419 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 95.5900 _refine.ls_percent_reflns_R_free 7.4400 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2510 _refine.ls_R_factor_R_free 0.2771 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2490 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol 59.9100 _refine.solvent_model_param_ksol 0.3810 _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.280 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.8300 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 26.7000 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3300 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.2990 _refine_hist.d_res_low 57.7790 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 103 _refine_hist.number_atoms_total 3010 _refine_hist.pdbx_number_residues_total 331 _refine_hist.pdbx_B_iso_mean_solvent 44.88 _refine_hist.pdbx_number_atoms_protein 2462 _refine_hist.pdbx_number_atoms_nucleic_acid 445 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.002 ? 2980 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.690 ? 4072 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.035 ? 460 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.001 ? 457 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 18.875 ? 1219 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.2990 2.3812 3296 . 240 3056 95.0000 . . . 0.2708 0.0000 0.2349 . . . . . . 10 . . . 'X-RAY DIFFRACTION' 2.3812 2.4765 3034 . 233 2801 91.0000 . . . 0.2911 0.0000 0.2530 . . . . . . 10 . . . 'X-RAY DIFFRACTION' 2.4765 2.5893 3179 . 236 2943 94.0000 . . . 0.3506 0.0000 0.2521 . . . . . . 10 . . . 'X-RAY DIFFRACTION' 2.5893 2.7258 3358 . 240 3118 97.0000 . . . 0.2890 0.0000 0.2568 . . . . . . 10 . . . 'X-RAY DIFFRACTION' 2.7258 2.8965 3306 . 243 3063 98.0000 . . . 0.2954 0.0000 0.2523 . . . . . . 10 . . . 'X-RAY DIFFRACTION' 2.8965 3.1202 3231 . 248 2983 96.0000 . . . 0.2752 0.0000 0.2729 . . . . . . 10 . . . 'X-RAY DIFFRACTION' 3.1202 3.4341 3216 . 236 2980 94.0000 . . . 0.3267 0.0000 0.2892 . . . . . . 10 . . . 'X-RAY DIFFRACTION' 3.4341 3.9310 3383 . 250 3133 98.0000 . . . 0.2608 0.0000 0.2382 . . . . . . 10 . . . 'X-RAY DIFFRACTION' 3.9310 4.9522 3160 . 237 2923 94.0000 . . . 0.2417 0.0000 0.2127 . . . . . . 10 . . . 'X-RAY DIFFRACTION' 4.9522 57.7974 3329 . 256 3073 97.0000 . . . 0.2659 0.0000 0.2570 . . . . . . 10 . . . # _struct.entry_id 6CG8 _struct.title 'Structure of C. crescentus GapR-DNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6CG8 _struct_keywords.text 'GapR, DNA binding, DNA BINDING PROTEIN, DNA BINDING PROTEIN-DNA complex' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP A0A258D3B4_CAUVI A0A258D3B4 ? 1 NSTAQGQLKSIIERVERLEVEKAEIMEQIKEVYAEAKGNGFDVKVLKKVVRIRKQDRAKRQEEDAILDLYLSAIGEI 13 2 PDB 6CG8 6CG8 ? 2 ? 1 3 PDB 6CG8 6CG8 ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6CG8 A 2 ? 78 ? A0A258D3B4 13 ? 89 ? 13 89 2 1 6CG8 B 2 ? 78 ? A0A258D3B4 13 ? 89 ? 13 89 3 1 6CG8 D 2 ? 78 ? A0A258D3B4 13 ? 89 ? 13 89 4 1 6CG8 E 2 ? 78 ? A0A258D3B4 13 ? 89 ? 13 89 5 2 6CG8 C 1 ? 11 ? 6CG8 3 ? 13 ? 3 13 6 3 6CG8 F 1 ? 11 ? 6CG8 7 ? 17 ? 7 17 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6CG8 MET A 1 ? UNP A0A258D3B4 ? ? 'initiating methionine' 12 1 1 6CG8 MET A 72 ? UNP A0A258D3B4 LEU 83 conflict 83 2 2 6CG8 MET B 1 ? UNP A0A258D3B4 ? ? 'initiating methionine' 12 3 2 6CG8 MET B 72 ? UNP A0A258D3B4 LEU 83 conflict 83 4 3 6CG8 MET D 1 ? UNP A0A258D3B4 ? ? 'initiating methionine' 12 5 3 6CG8 MET D 72 ? UNP A0A258D3B4 LEU 83 conflict 83 6 4 6CG8 MET E 1 ? UNP A0A258D3B4 ? ? 'initiating methionine' 12 7 4 6CG8 MET E 72 ? UNP A0A258D3B4 LEU 83 conflict 83 8 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 12660 ? 1 MORE -113 ? 1 'SSA (A^2)' 21230 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 2 ? ASN A 40 ? ASN A 13 ASN A 51 1 ? 39 HELX_P HELX_P2 AA2 ASP A 43 ? LYS A 55 ? ASP A 54 LYS A 66 1 ? 13 HELX_P HELX_P3 AA3 ASP A 57 ? ILE A 75 ? ASP A 68 ILE A 86 1 ? 19 HELX_P HELX_P4 AA4 ASN B 2 ? GLY B 41 ? ASN B 13 GLY B 52 1 ? 40 HELX_P HELX_P5 AA5 ASP B 43 ? GLN B 56 ? ASP B 54 GLN B 67 1 ? 14 HELX_P HELX_P6 AA6 ASP B 57 ? ILE B 75 ? ASP B 68 ILE B 86 1 ? 19 HELX_P HELX_P7 AA7 ASN C 2 ? ASN C 40 ? ASN D 13 ASN D 51 1 ? 39 HELX_P HELX_P8 AA8 ASP C 43 ? GLN C 56 ? ASP D 54 GLN D 67 1 ? 14 HELX_P HELX_P9 AA9 ASP C 57 ? GLY C 76 ? ASP D 68 GLY D 87 1 ? 20 HELX_P HELX_P10 AB1 ASN D 2 ? GLY D 39 ? ASN E 13 GLY E 50 1 ? 38 HELX_P HELX_P11 AB2 ASP D 43 ? GLN D 56 ? ASP E 54 GLN E 67 1 ? 14 HELX_P HELX_P12 AB3 ASP D 57 ? ILE D 75 ? ASP E 68 ILE E 86 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? E DT 1 N3 ? ? ? 1_555 F DA 11 N1 ? ? C DT 3 F DA 17 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog2 hydrog ? ? E DT 2 N3 ? ? ? 1_555 F DA 10 N1 ? ? C DT 4 F DA 16 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog3 hydrog ? ? E DA 3 N1 ? ? ? 1_555 F DT 8 N3 ? ? C DA 5 F DT 14 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog4 hydrog ? ? E DA 3 N1 ? ? ? 1_555 F DT 9 N3 ? ? C DA 5 F DT 15 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog5 hydrog ? ? E DA 5 N1 ? ? ? 1_555 F DT 7 N3 ? ? C DA 7 F DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? E DA 5 N6 ? ? ? 1_555 F DT 7 O4 ? ? C DA 7 F DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? E DA 6 N1 ? ? ? 1_555 F DT 6 N3 ? ? C DA 8 F DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? E DA 6 N6 ? ? ? 1_555 F DT 6 O4 ? ? C DA 8 F DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? E DT 7 N3 ? ? ? 1_555 F DA 5 N1 ? ? C DT 9 F DA 11 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog10 hydrog ? ? E DT 8 N3 ? ? ? 1_555 F DA 4 N1 ? ? C DT 10 F DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? E DT 8 O4 ? ? ? 1_555 F DA 4 N6 ? ? C DT 10 F DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? E DA 9 N6 ? ? ? 1_555 F DT 3 O4 ? ? C DA 11 F DT 9 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog13 hydrog ? ? E DA 11 N1 ? ? ? 1_555 F DT 1 N3 ? ? C DA 13 F DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? E DA 11 N6 ? ? ? 1_555 F DT 1 O4 ? ? C DA 13 F DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" C DA 6 ? ? "C1'" C DA 6 ? ? N9 C DA 6 ? ? 111.46 108.30 3.16 0.30 N 2 1 "C3'" F DT 8 ? ? "C2'" F DT 8 ? ? "C1'" F DT 8 ? ? 96.91 102.40 -5.49 0.80 N 3 1 "O4'" F DT 8 ? ? "C1'" F DT 8 ? ? N1 F DT 8 ? ? 113.42 108.30 5.12 0.30 N 4 1 "O4'" F DT 9 ? ? "C1'" F DT 9 ? ? N1 F DT 9 ? ? 110.28 108.30 1.98 0.30 N 5 1 "O4'" F DT 12 ? ? "C1'" F DT 12 ? ? N1 F DT 12 ? ? 112.04 108.30 3.74 0.30 N 6 1 "O4'" F DA 17 ? ? "C1'" F DA 17 ? ? N9 F DA 17 ? ? 118.74 108.30 10.44 0.30 N # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 B HOH 104 ? H HOH . 2 1 E HOH 127 ? J HOH . # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -5.9818 _pdbx_refine_tls.origin_y 6.3674 _pdbx_refine_tls.origin_z 28.8691 _pdbx_refine_tls.T[1][1] 0.1741 _pdbx_refine_tls.T[2][2] 0.1581 _pdbx_refine_tls.T[3][3] 0.1771 _pdbx_refine_tls.T[1][2] 0.0077 _pdbx_refine_tls.T[1][3] 0.0011 _pdbx_refine_tls.T[2][3] -0.0121 _pdbx_refine_tls.L[1][1] 0.2302 _pdbx_refine_tls.L[2][2] 0.1494 _pdbx_refine_tls.L[3][3] 0.2685 _pdbx_refine_tls.L[1][2] 0.0938 _pdbx_refine_tls.L[1][3] 0.2132 _pdbx_refine_tls.L[2][3] 0.0674 _pdbx_refine_tls.S[1][1] -0.0678 _pdbx_refine_tls.S[2][2] 0.0013 _pdbx_refine_tls.S[3][3] -0.0000 _pdbx_refine_tls.S[1][2] 0.0137 _pdbx_refine_tls.S[1][3] -0.0070 _pdbx_refine_tls.S[2][3] -0.0042 _pdbx_refine_tls.S[2][1] 0.0119 _pdbx_refine_tls.S[3][1] 0.0057 _pdbx_refine_tls.S[3][2] -0.0387 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 12 A 88 all ? ? ? ? ? 'X-RAY DIFFRACTION' 2 1 B 12 B 88 all ? ? ? ? ? 'X-RAY DIFFRACTION' 3 1 D 12 D 88 all ? ? ? ? ? 'X-RAY DIFFRACTION' 4 1 E 12 E 89 all ? ? ? ? ? 'X-RAY DIFFRACTION' 5 1 C 3 C 13 all ? ? ? ? ? 'X-RAY DIFFRACTION' 6 1 F 7 F 17 all ? ? ? ? ? 'X-RAY DIFFRACTION' 7 1 S 1 S 104 all ? ? ? ? ? # _phasing.method MAD # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ILE 89 ? A ILE 78 2 1 Y 1 B ILE 89 ? B ILE 78 3 1 Y 1 D ILE 89 ? C ILE 78 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DT OP3 O N N 110 DT P P N N 111 DT OP1 O N N 112 DT OP2 O N N 113 DT "O5'" O N N 114 DT "C5'" C N N 115 DT "C4'" C N R 116 DT "O4'" O N N 117 DT "C3'" C N S 118 DT "O3'" O N N 119 DT "C2'" C N N 120 DT "C1'" C N R 121 DT N1 N N N 122 DT C2 C N N 123 DT O2 O N N 124 DT N3 N N N 125 DT C4 C N N 126 DT O4 O N N 127 DT C5 C N N 128 DT C7 C N N 129 DT C6 C N N 130 DT HOP3 H N N 131 DT HOP2 H N N 132 DT "H5'" H N N 133 DT "H5''" H N N 134 DT "H4'" H N N 135 DT "H3'" H N N 136 DT "HO3'" H N N 137 DT "H2'" H N N 138 DT "H2''" H N N 139 DT "H1'" H N N 140 DT H3 H N N 141 DT H71 H N N 142 DT H72 H N N 143 DT H73 H N N 144 DT H6 H N N 145 GLN N N N N 146 GLN CA C N S 147 GLN C C N N 148 GLN O O N N 149 GLN CB C N N 150 GLN CG C N N 151 GLN CD C N N 152 GLN OE1 O N N 153 GLN NE2 N N N 154 GLN OXT O N N 155 GLN H H N N 156 GLN H2 H N N 157 GLN HA H N N 158 GLN HB2 H N N 159 GLN HB3 H N N 160 GLN HG2 H N N 161 GLN HG3 H N N 162 GLN HE21 H N N 163 GLN HE22 H N N 164 GLN HXT H N N 165 GLU N N N N 166 GLU CA C N S 167 GLU C C N N 168 GLU O O N N 169 GLU CB C N N 170 GLU CG C N N 171 GLU CD C N N 172 GLU OE1 O N N 173 GLU OE2 O N N 174 GLU OXT O N N 175 GLU H H N N 176 GLU H2 H N N 177 GLU HA H N N 178 GLU HB2 H N N 179 GLU HB3 H N N 180 GLU HG2 H N N 181 GLU HG3 H N N 182 GLU HE2 H N N 183 GLU HXT H N N 184 GLY N N N N 185 GLY CA C N N 186 GLY C C N N 187 GLY O O N N 188 GLY OXT O N N 189 GLY H H N N 190 GLY H2 H N N 191 GLY HA2 H N N 192 GLY HA3 H N N 193 GLY HXT H N N 194 HOH O O N N 195 HOH H1 H N N 196 HOH H2 H N N 197 ILE N N N N 198 ILE CA C N S 199 ILE C C N N 200 ILE O O N N 201 ILE CB C N S 202 ILE CG1 C N N 203 ILE CG2 C N N 204 ILE CD1 C N N 205 ILE OXT O N N 206 ILE H H N N 207 ILE H2 H N N 208 ILE HA H N N 209 ILE HB H N N 210 ILE HG12 H N N 211 ILE HG13 H N N 212 ILE HG21 H N N 213 ILE HG22 H N N 214 ILE HG23 H N N 215 ILE HD11 H N N 216 ILE HD12 H N N 217 ILE HD13 H N N 218 ILE HXT H N N 219 LEU N N N N 220 LEU CA C N S 221 LEU C C N N 222 LEU O O N N 223 LEU CB C N N 224 LEU CG C N N 225 LEU CD1 C N N 226 LEU CD2 C N N 227 LEU OXT O N N 228 LEU H H N N 229 LEU H2 H N N 230 LEU HA H N N 231 LEU HB2 H N N 232 LEU HB3 H N N 233 LEU HG H N N 234 LEU HD11 H N N 235 LEU HD12 H N N 236 LEU HD13 H N N 237 LEU HD21 H N N 238 LEU HD22 H N N 239 LEU HD23 H N N 240 LEU HXT H N N 241 LYS N N N N 242 LYS CA C N S 243 LYS C C N N 244 LYS O O N N 245 LYS CB C N N 246 LYS CG C N N 247 LYS CD C N N 248 LYS CE C N N 249 LYS NZ N N N 250 LYS OXT O N N 251 LYS H H N N 252 LYS H2 H N N 253 LYS HA H N N 254 LYS HB2 H N N 255 LYS HB3 H N N 256 LYS HG2 H N N 257 LYS HG3 H N N 258 LYS HD2 H N N 259 LYS HD3 H N N 260 LYS HE2 H N N 261 LYS HE3 H N N 262 LYS HZ1 H N N 263 LYS HZ2 H N N 264 LYS HZ3 H N N 265 LYS HXT H N N 266 MET N N N N 267 MET CA C N S 268 MET C C N N 269 MET O O N N 270 MET CB C N N 271 MET CG C N N 272 MET SD S N N 273 MET CE C N N 274 MET OXT O N N 275 MET H H N N 276 MET H2 H N N 277 MET HA H N N 278 MET HB2 H N N 279 MET HB3 H N N 280 MET HG2 H N N 281 MET HG3 H N N 282 MET HE1 H N N 283 MET HE2 H N N 284 MET HE3 H N N 285 MET HXT H N N 286 PHE N N N N 287 PHE CA C N S 288 PHE C C N N 289 PHE O O N N 290 PHE CB C N N 291 PHE CG C Y N 292 PHE CD1 C Y N 293 PHE CD2 C Y N 294 PHE CE1 C Y N 295 PHE CE2 C Y N 296 PHE CZ C Y N 297 PHE OXT O N N 298 PHE H H N N 299 PHE H2 H N N 300 PHE HA H N N 301 PHE HB2 H N N 302 PHE HB3 H N N 303 PHE HD1 H N N 304 PHE HD2 H N N 305 PHE HE1 H N N 306 PHE HE2 H N N 307 PHE HZ H N N 308 PHE HXT H N N 309 SER N N N N 310 SER CA C N S 311 SER C C N N 312 SER O O N N 313 SER CB C N N 314 SER OG O N N 315 SER OXT O N N 316 SER H H N N 317 SER H2 H N N 318 SER HA H N N 319 SER HB2 H N N 320 SER HB3 H N N 321 SER HG H N N 322 SER HXT H N N 323 THR N N N N 324 THR CA C N S 325 THR C C N N 326 THR O O N N 327 THR CB C N R 328 THR OG1 O N N 329 THR CG2 C N N 330 THR OXT O N N 331 THR H H N N 332 THR H2 H N N 333 THR HA H N N 334 THR HB H N N 335 THR HG1 H N N 336 THR HG21 H N N 337 THR HG22 H N N 338 THR HG23 H N N 339 THR HXT H N N 340 TYR N N N N 341 TYR CA C N S 342 TYR C C N N 343 TYR O O N N 344 TYR CB C N N 345 TYR CG C Y N 346 TYR CD1 C Y N 347 TYR CD2 C Y N 348 TYR CE1 C Y N 349 TYR CE2 C Y N 350 TYR CZ C Y N 351 TYR OH O N N 352 TYR OXT O N N 353 TYR H H N N 354 TYR H2 H N N 355 TYR HA H N N 356 TYR HB2 H N N 357 TYR HB3 H N N 358 TYR HD1 H N N 359 TYR HD2 H N N 360 TYR HE1 H N N 361 TYR HE2 H N N 362 TYR HH H N N 363 TYR HXT H N N 364 VAL N N N N 365 VAL CA C N S 366 VAL C C N N 367 VAL O O N N 368 VAL CB C N N 369 VAL CG1 C N N 370 VAL CG2 C N N 371 VAL OXT O N N 372 VAL H H N N 373 VAL H2 H N N 374 VAL HA H N N 375 VAL HB H N N 376 VAL HG11 H N N 377 VAL HG12 H N N 378 VAL HG13 H N N 379 VAL HG21 H N N 380 VAL HG22 H N N 381 VAL HG23 H N N 382 VAL HXT H N N 383 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DT OP3 P sing N N 108 DT OP3 HOP3 sing N N 109 DT P OP1 doub N N 110 DT P OP2 sing N N 111 DT P "O5'" sing N N 112 DT OP2 HOP2 sing N N 113 DT "O5'" "C5'" sing N N 114 DT "C5'" "C4'" sing N N 115 DT "C5'" "H5'" sing N N 116 DT "C5'" "H5''" sing N N 117 DT "C4'" "O4'" sing N N 118 DT "C4'" "C3'" sing N N 119 DT "C4'" "H4'" sing N N 120 DT "O4'" "C1'" sing N N 121 DT "C3'" "O3'" sing N N 122 DT "C3'" "C2'" sing N N 123 DT "C3'" "H3'" sing N N 124 DT "O3'" "HO3'" sing N N 125 DT "C2'" "C1'" sing N N 126 DT "C2'" "H2'" sing N N 127 DT "C2'" "H2''" sing N N 128 DT "C1'" N1 sing N N 129 DT "C1'" "H1'" sing N N 130 DT N1 C2 sing N N 131 DT N1 C6 sing N N 132 DT C2 O2 doub N N 133 DT C2 N3 sing N N 134 DT N3 C4 sing N N 135 DT N3 H3 sing N N 136 DT C4 O4 doub N N 137 DT C4 C5 sing N N 138 DT C5 C7 sing N N 139 DT C5 C6 doub N N 140 DT C7 H71 sing N N 141 DT C7 H72 sing N N 142 DT C7 H73 sing N N 143 DT C6 H6 sing N N 144 GLN N CA sing N N 145 GLN N H sing N N 146 GLN N H2 sing N N 147 GLN CA C sing N N 148 GLN CA CB sing N N 149 GLN CA HA sing N N 150 GLN C O doub N N 151 GLN C OXT sing N N 152 GLN CB CG sing N N 153 GLN CB HB2 sing N N 154 GLN CB HB3 sing N N 155 GLN CG CD sing N N 156 GLN CG HG2 sing N N 157 GLN CG HG3 sing N N 158 GLN CD OE1 doub N N 159 GLN CD NE2 sing N N 160 GLN NE2 HE21 sing N N 161 GLN NE2 HE22 sing N N 162 GLN OXT HXT sing N N 163 GLU N CA sing N N 164 GLU N H sing N N 165 GLU N H2 sing N N 166 GLU CA C sing N N 167 GLU CA CB sing N N 168 GLU CA HA sing N N 169 GLU C O doub N N 170 GLU C OXT sing N N 171 GLU CB CG sing N N 172 GLU CB HB2 sing N N 173 GLU CB HB3 sing N N 174 GLU CG CD sing N N 175 GLU CG HG2 sing N N 176 GLU CG HG3 sing N N 177 GLU CD OE1 doub N N 178 GLU CD OE2 sing N N 179 GLU OE2 HE2 sing N N 180 GLU OXT HXT sing N N 181 GLY N CA sing N N 182 GLY N H sing N N 183 GLY N H2 sing N N 184 GLY CA C sing N N 185 GLY CA HA2 sing N N 186 GLY CA HA3 sing N N 187 GLY C O doub N N 188 GLY C OXT sing N N 189 GLY OXT HXT sing N N 190 HOH O H1 sing N N 191 HOH O H2 sing N N 192 ILE N CA sing N N 193 ILE N H sing N N 194 ILE N H2 sing N N 195 ILE CA C sing N N 196 ILE CA CB sing N N 197 ILE CA HA sing N N 198 ILE C O doub N N 199 ILE C OXT sing N N 200 ILE CB CG1 sing N N 201 ILE CB CG2 sing N N 202 ILE CB HB sing N N 203 ILE CG1 CD1 sing N N 204 ILE CG1 HG12 sing N N 205 ILE CG1 HG13 sing N N 206 ILE CG2 HG21 sing N N 207 ILE CG2 HG22 sing N N 208 ILE CG2 HG23 sing N N 209 ILE CD1 HD11 sing N N 210 ILE CD1 HD12 sing N N 211 ILE CD1 HD13 sing N N 212 ILE OXT HXT sing N N 213 LEU N CA sing N N 214 LEU N H sing N N 215 LEU N H2 sing N N 216 LEU CA C sing N N 217 LEU CA CB sing N N 218 LEU CA HA sing N N 219 LEU C O doub N N 220 LEU C OXT sing N N 221 LEU CB CG sing N N 222 LEU CB HB2 sing N N 223 LEU CB HB3 sing N N 224 LEU CG CD1 sing N N 225 LEU CG CD2 sing N N 226 LEU CG HG sing N N 227 LEU CD1 HD11 sing N N 228 LEU CD1 HD12 sing N N 229 LEU CD1 HD13 sing N N 230 LEU CD2 HD21 sing N N 231 LEU CD2 HD22 sing N N 232 LEU CD2 HD23 sing N N 233 LEU OXT HXT sing N N 234 LYS N CA sing N N 235 LYS N H sing N N 236 LYS N H2 sing N N 237 LYS CA C sing N N 238 LYS CA CB sing N N 239 LYS CA HA sing N N 240 LYS C O doub N N 241 LYS C OXT sing N N 242 LYS CB CG sing N N 243 LYS CB HB2 sing N N 244 LYS CB HB3 sing N N 245 LYS CG CD sing N N 246 LYS CG HG2 sing N N 247 LYS CG HG3 sing N N 248 LYS CD CE sing N N 249 LYS CD HD2 sing N N 250 LYS CD HD3 sing N N 251 LYS CE NZ sing N N 252 LYS CE HE2 sing N N 253 LYS CE HE3 sing N N 254 LYS NZ HZ1 sing N N 255 LYS NZ HZ2 sing N N 256 LYS NZ HZ3 sing N N 257 LYS OXT HXT sing N N 258 MET N CA sing N N 259 MET N H sing N N 260 MET N H2 sing N N 261 MET CA C sing N N 262 MET CA CB sing N N 263 MET CA HA sing N N 264 MET C O doub N N 265 MET C OXT sing N N 266 MET CB CG sing N N 267 MET CB HB2 sing N N 268 MET CB HB3 sing N N 269 MET CG SD sing N N 270 MET CG HG2 sing N N 271 MET CG HG3 sing N N 272 MET SD CE sing N N 273 MET CE HE1 sing N N 274 MET CE HE2 sing N N 275 MET CE HE3 sing N N 276 MET OXT HXT sing N N 277 PHE N CA sing N N 278 PHE N H sing N N 279 PHE N H2 sing N N 280 PHE CA C sing N N 281 PHE CA CB sing N N 282 PHE CA HA sing N N 283 PHE C O doub N N 284 PHE C OXT sing N N 285 PHE CB CG sing N N 286 PHE CB HB2 sing N N 287 PHE CB HB3 sing N N 288 PHE CG CD1 doub Y N 289 PHE CG CD2 sing Y N 290 PHE CD1 CE1 sing Y N 291 PHE CD1 HD1 sing N N 292 PHE CD2 CE2 doub Y N 293 PHE CD2 HD2 sing N N 294 PHE CE1 CZ doub Y N 295 PHE CE1 HE1 sing N N 296 PHE CE2 CZ sing Y N 297 PHE CE2 HE2 sing N N 298 PHE CZ HZ sing N N 299 PHE OXT HXT sing N N 300 SER N CA sing N N 301 SER N H sing N N 302 SER N H2 sing N N 303 SER CA C sing N N 304 SER CA CB sing N N 305 SER CA HA sing N N 306 SER C O doub N N 307 SER C OXT sing N N 308 SER CB OG sing N N 309 SER CB HB2 sing N N 310 SER CB HB3 sing N N 311 SER OG HG sing N N 312 SER OXT HXT sing N N 313 THR N CA sing N N 314 THR N H sing N N 315 THR N H2 sing N N 316 THR CA C sing N N 317 THR CA CB sing N N 318 THR CA HA sing N N 319 THR C O doub N N 320 THR C OXT sing N N 321 THR CB OG1 sing N N 322 THR CB CG2 sing N N 323 THR CB HB sing N N 324 THR OG1 HG1 sing N N 325 THR CG2 HG21 sing N N 326 THR CG2 HG22 sing N N 327 THR CG2 HG23 sing N N 328 THR OXT HXT sing N N 329 TYR N CA sing N N 330 TYR N H sing N N 331 TYR N H2 sing N N 332 TYR CA C sing N N 333 TYR CA CB sing N N 334 TYR CA HA sing N N 335 TYR C O doub N N 336 TYR C OXT sing N N 337 TYR CB CG sing N N 338 TYR CB HB2 sing N N 339 TYR CB HB3 sing N N 340 TYR CG CD1 doub Y N 341 TYR CG CD2 sing Y N 342 TYR CD1 CE1 sing Y N 343 TYR CD1 HD1 sing N N 344 TYR CD2 CE2 doub Y N 345 TYR CD2 HD2 sing N N 346 TYR CE1 CZ doub Y N 347 TYR CE1 HE1 sing N N 348 TYR CE2 CZ sing Y N 349 TYR CE2 HE2 sing N N 350 TYR CZ OH sing N N 351 TYR OH HH sing N N 352 TYR OXT HXT sing N N 353 VAL N CA sing N N 354 VAL N H sing N N 355 VAL N H2 sing N N 356 VAL CA C sing N N 357 VAL CA CB sing N N 358 VAL CA HA sing N N 359 VAL C O doub N N 360 VAL C OXT sing N N 361 VAL CB CG1 sing N N 362 VAL CB CG2 sing N N 363 VAL CB HB sing N N 364 VAL CG1 HG11 sing N N 365 VAL CG1 HG12 sing N N 366 VAL CG1 HG13 sing N N 367 VAL CG2 HG21 sing N N 368 VAL CG2 HG22 sing N N 369 VAL CG2 HG23 sing N N 370 VAL OXT HXT sing N N 371 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6CG8 'double helix' 6CG8 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 E DT 1 1_555 F DA 11 1_555 -1.361 0.292 0.162 -19.570 -25.382 28.909 1 C_DT3:DA17_F C 3 ? F 17 ? ? 1 1 E DT 2 1_555 F DA 10 1_555 0.418 0.051 -0.771 -16.506 -11.629 36.696 2 C_DT4:DA16_F C 4 ? F 16 ? ? 1 1 E DA 3 1_555 F DT 9 1_555 0.424 0.317 -0.019 -30.232 -9.064 39.753 3 C_DA5:DT15_F C 5 ? F 15 ? ? 1 1 E DA 5 1_555 F DT 7 1_555 1.208 -0.662 -0.263 2.289 -9.086 3.250 4 C_DA7:DT13_F C 7 ? F 13 ? 20 1 1 E DA 6 1_555 F DT 6 1_555 -0.186 -0.798 -0.979 -4.237 -22.219 9.322 5 C_DA8:DT12_F C 8 ? F 12 ? 20 1 1 E DT 7 1_555 F DA 5 1_555 -2.051 0.349 0.055 5.979 -29.003 14.497 6 C_DT9:DA11_F C 9 ? F 11 ? ? 1 1 E DT 8 1_555 F DA 4 1_555 0.875 -0.275 0.788 3.621 -8.924 5.678 7 C_DT10:DA10_F C 10 ? F 10 ? 20 1 1 E DA 9 1_555 F DT 3 1_555 1.979 0.626 -1.045 -17.624 -20.429 -8.746 8 C_DA11:DT9_F C 11 ? F 9 ? ? ? 1 E DA 11 1_555 F DT 1 1_555 0.976 -0.163 -1.231 -28.457 -28.440 -1.726 9 C_DA13:DT7_F C 13 ? F 7 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 E DT 1 1_555 F DA 11 1_555 E DT 2 1_555 F DA 10 1_555 0.101 1.007 2.880 5.166 4.373 37.415 1.045 0.437 2.963 6.750 -7.973 38.000 1 CC_DT3DT4:DA16DA17_FF C 3 ? F 17 ? C 4 ? F 16 ? 1 E DT 2 1_555 F DA 10 1_555 E DA 3 1_555 F DT 9 1_555 0.964 0.839 4.068 -4.541 -0.525 37.459 1.380 -2.209 3.917 -0.813 7.039 37.727 2 CC_DT4DA5:DT15DA16_FF C 4 ? F 16 ? C 5 ? F 15 ? 1 E DA 3 1_555 F DT 9 1_555 E DA 5 1_555 F DT 7 1_555 -0.938 0.279 5.654 -0.749 0.116 59.072 0.273 0.885 5.665 0.118 0.760 59.076 3 CC_DA5DA7:DT13DT15_FF C 5 ? F 15 ? C 7 ? F 13 ? 1 E DA 5 1_555 F DT 7 1_555 E DA 6 1_555 F DT 6 1_555 -0.102 -0.865 3.546 3.605 11.086 21.776 -5.490 1.366 2.737 26.998 -8.779 24.667 4 CC_DA7DA8:DT12DT13_FF C 7 ? F 13 ? C 8 ? F 12 ? 1 E DA 6 1_555 F DT 6 1_555 E DT 7 1_555 F DA 5 1_555 0.351 0.560 2.401 -3.133 -2.948 33.137 1.327 -0.984 2.302 -5.142 5.464 33.407 5 CC_DA8DT9:DA11DT12_FF C 8 ? F 12 ? C 9 ? F 11 ? 1 E DT 7 1_555 F DA 5 1_555 E DT 8 1_555 F DA 4 1_555 -0.129 0.074 3.723 -10.210 -5.538 46.578 0.593 -0.766 3.642 -6.879 12.681 47.927 6 CC_DT9DT10:DA10DA11_FF C 9 ? F 11 ? C 10 ? F 10 ? 1 E DT 8 1_555 F DA 4 1_555 E DA 9 1_555 F DT 3 1_555 -1.531 -0.600 3.630 11.078 3.832 43.608 -1.144 3.041 3.111 5.050 -14.600 45.082 7 CC_DT10DA11:DT9DA10_FF C 10 ? F 10 ? C 11 ? F 9 ? 1 E DA 9 1_555 F DT 3 1_555 E DA 11 1_555 F DT 1 1_555 -0.193 1.583 6.504 -2.054 0.886 74.731 1.250 0.033 6.522 0.730 1.692 74.760 8 CC_DA11DA13:DT7DT9_FF C 11 ? F 9 ? C 13 ? F 7 ? # _atom_sites.entry_id 6CG8 _atom_sites.fract_transf_matrix[1][1] 0.010426 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000032 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.028106 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008654 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_