HEADER LYASE 23-FEB-18 6CHU TITLE CRYSTAL STRUCTURE OF PROTEIN CITE FROM MYCOBACTERIUM TUBERCULOSIS IN TITLE 2 COMPLEX WITH MAGNESIUM AND ACETATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CITRATE LYASE SUBUNIT BETA-LIKE PROTEIN; COMPND 3 CHAIN: A; COMPND 4 EC: 4.1.-.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS H37RV; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 GENE: CITE, RV2498C; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN CITE, MYCOBACTERIUM TUBERCULOSIS, ACETATE, TIM-BARREL, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR A.A.FEDOROV,E.V.FEDOROV,H.WANG,J.B.BONANNO,L.CARVALHO,S.C.ALMO REVDAT 7 25-OCT-23 6CHU 1 REMARK REVDAT 6 01-MAR-23 6CHU 1 SOURCE JRNL DBREF SEQADV REVDAT 5 29-JUL-20 6CHU 1 AUTHOR LINK REVDAT 4 21-AUG-19 6CHU 1 JRNL REVDAT 3 31-JUL-19 6CHU 1 JRNL REVDAT 2 13-FEB-19 6CHU 1 JRNL REVDAT 1 01-AUG-18 6CHU 0 JRNL AUTH H.WANG,A.A.FEDOROV,E.V.FEDOROV,D.M.HUNT,A.RODGERS, JRNL AUTH 2 H.L.DOUGLAS,A.GARZA-GARCIA,J.B.BONANNO,S.C.ALMO, JRNL AUTH 3 L.P.S.DE CARVALHO JRNL TITL AN ESSENTIAL BIFUNCTIONAL ENZYME INMYCOBACTERIUM JRNL TITL 2 TUBERCULOSISFOR ITACONATE DISSIMILATION AND LEUCINE JRNL TITL 3 CATABOLISM. JRNL REF PROC.NATL.ACAD.SCI.USA V. 116 15907 2019 JRNL REFN ESSN 1091-6490 JRNL PMID 31320588 JRNL DOI 10.1073/PNAS.1906606116 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH H.WANG,A.A.FEDOROV,E.V.FEDOROV,D.M.HUNT,A.RODGERS, REMARK 1 AUTH 2 A.GARZA-GARCIA,J.B.BONANNO,S.C.ALMO REMARK 1 TITL DISCOVERY OF A NOVEL STEREOSPECIFIC BETA-HYDROXYACYL-COA REMARK 1 TITL 2 LYASE/THIOESTERASE SHARED BY THREE METABOLIC PATHWAYS IN REMARK 1 TITL 3 MYCOBACTERIUM TUBERCULOSIS REMARK 1 REF BIORXIV 2018 REMARK 1 REFN ISSN 2692-8205 REMARK 1 DOI 10.1101/322404 REMARK 2 REMARK 2 RESOLUTION. 1.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.77 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.870 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 88184 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.020 REMARK 3 FREE R VALUE TEST SET COUNT : 3546 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.7698 - 4.6974 1.00 3395 145 0.1810 0.1786 REMARK 3 2 4.6974 - 3.7326 1.00 3430 115 0.1548 0.1622 REMARK 3 3 3.7326 - 3.2619 1.00 3353 180 0.1787 0.1649 REMARK 3 4 3.2619 - 2.9642 1.00 3373 172 0.1856 0.2128 REMARK 3 5 2.9642 - 2.7521 1.00 3372 146 0.2053 0.1654 REMARK 3 6 2.7521 - 2.5900 1.00 3396 134 0.1961 0.2763 REMARK 3 7 2.5900 - 2.4604 1.00 3363 165 0.1883 0.1908 REMARK 3 8 2.4604 - 2.3534 1.00 3444 129 0.1828 0.1869 REMARK 3 9 2.3534 - 2.2629 1.00 3372 151 0.1758 0.1850 REMARK 3 10 2.2629 - 2.1848 1.00 3408 124 0.1782 0.2022 REMARK 3 11 2.1848 - 2.1165 1.00 3403 139 0.1944 0.1972 REMARK 3 12 2.1165 - 2.0561 1.00 3371 135 0.2040 0.2155 REMARK 3 13 2.0561 - 2.0020 1.00 3383 155 0.1967 0.1839 REMARK 3 14 2.0020 - 1.9531 1.00 3389 141 0.2149 0.2092 REMARK 3 15 1.9531 - 1.9088 1.00 3368 168 0.2400 0.2618 REMARK 3 16 1.9088 - 1.8682 1.00 3392 127 0.2553 0.2571 REMARK 3 17 1.8682 - 1.8308 1.00 3356 166 0.2707 0.2872 REMARK 3 18 1.8308 - 1.7963 1.00 3410 136 0.2893 0.2982 REMARK 3 19 1.7963 - 1.7642 1.00 3369 144 0.3194 0.3007 REMARK 3 20 1.7642 - 1.7343 1.00 3357 141 0.3328 0.4215 REMARK 3 21 1.7343 - 1.7063 1.00 3429 132 0.3309 0.3036 REMARK 3 22 1.7063 - 1.6801 1.00 3378 133 0.3369 0.3657 REMARK 3 23 1.6801 - 1.6554 0.99 3336 134 0.3463 0.3118 REMARK 3 24 1.6554 - 1.6321 0.99 3423 123 0.3573 0.3294 REMARK 3 25 1.6321 - 1.6100 0.99 3368 111 0.3706 0.3649 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.860 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1823 REMARK 3 ANGLE : 0.784 2483 REMARK 3 CHIRALITY : 0.051 294 REMARK 3 PLANARITY : 0.005 335 REMARK 3 DIHEDRAL : 12.688 1109 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESSEQ 0:221 REMARK 3 ORIGIN FOR THE GROUP (A): 11.9906 -34.6053 19.4858 REMARK 3 T TENSOR REMARK 3 T11: 0.1838 T22: 0.1537 REMARK 3 T33: 0.1797 T12: -0.0154 REMARK 3 T13: 0.0341 T23: 0.0015 REMARK 3 L TENSOR REMARK 3 L11: 1.0519 L22: 1.3724 REMARK 3 L33: 1.5781 L12: 0.1917 REMARK 3 L13: 0.0655 L23: 0.0276 REMARK 3 S TENSOR REMARK 3 S11: -0.0047 S12: 0.1193 S13: 0.1768 REMARK 3 S21: -0.0663 S22: 0.0866 S23: -0.0868 REMARK 3 S31: -0.2165 S32: 0.0812 S33: -0.0812 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESSEQ 250:265 REMARK 3 ORIGIN FOR THE GROUP (A): -16.6429 -34.5418 10.9810 REMARK 3 T TENSOR REMARK 3 T11: 0.7526 T22: 0.7943 REMARK 3 T33: 0.6111 T12: 0.2462 REMARK 3 T13: 0.0524 T23: 0.1615 REMARK 3 L TENSOR REMARK 3 L11: 6.1722 L22: 6.2087 REMARK 3 L33: 7.2611 L12: 5.1190 REMARK 3 L13: 2.5570 L23: 1.4795 REMARK 3 S TENSOR REMARK 3 S11: -0.2588 S12: 0.1799 S13: 0.3068 REMARK 3 S21: -0.3599 S22: -0.0074 S23: 0.1241 REMARK 3 S31: -0.2666 S32: 0.2102 S33: 0.1963 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6CHU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1000232790. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-OCT-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 88184 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.610 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.61 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1U5H REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MAGNESIUM CHLORIDE, SODIUM ACETATE, PH REMARK 280 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 45.56750 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 26.30841 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 73.43033 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 45.56750 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 26.30841 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 73.43033 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 45.56750 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 26.30841 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 73.43033 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 45.56750 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 26.30841 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 73.43033 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 45.56750 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 26.30841 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 73.43033 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 45.56750 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 26.30841 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 73.43033 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 52.61682 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 146.86067 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 52.61682 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 146.86067 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 52.61682 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 146.86067 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 52.61682 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 146.86067 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 52.61682 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 146.86067 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 52.61682 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 146.86067 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -82.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -45.56750 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -78.92523 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 45.56750 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 -78.92523 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 512 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 ARG A 222 REMARK 465 PRO A 223 REMARK 465 SER A 224 REMARK 465 HIS A 225 REMARK 465 GLU A 226 REMARK 465 LYS A 227 REMARK 465 LEU A 228 REMARK 465 ALA A 229 REMARK 465 TRP A 230 REMARK 465 ALA A 231 REMARK 465 ARG A 232 REMARK 465 ARG A 233 REMARK 465 VAL A 234 REMARK 465 LEU A 235 REMARK 465 ALA A 236 REMARK 465 ALA A 237 REMARK 465 SER A 238 REMARK 465 ARG A 239 REMARK 465 SER A 240 REMARK 465 GLU A 241 REMARK 465 ARG A 242 REMARK 465 GLY A 243 REMARK 465 ALA A 244 REMARK 465 PHE A 245 REMARK 465 ALA A 246 REMARK 465 PHE A 247 REMARK 465 GLU A 248 REMARK 465 GLY A 249 REMARK 465 ARG A 266 REMARK 465 ALA A 267 REMARK 465 GLY A 268 REMARK 465 GLU A 269 REMARK 465 ALA A 270 REMARK 465 THR A 271 REMARK 465 SER A 272 REMARK 465 GLU A 273 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 36 -121.76 -98.82 REMARK 500 GLU A 112 27.88 -151.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 112 OE1 REMARK 620 2 ASP A 138 OD2 92.3 REMARK 620 3 ACT A 305 OXT 94.3 173.3 REMARK 620 4 HOH A 417 O 175.4 83.3 90.2 REMARK 620 5 HOH A 434 O 88.5 89.1 92.1 90.1 REMARK 620 6 HOH A 439 O 87.4 92.3 87.0 94.1 175.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 306 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6AS5 RELATED DB: PDB REMARK 900 RELATED ID: 6ARB RELATED DB: PDB REMARK 900 RELATED ID: 6AQ4 RELATED DB: PDB DBREF 6CHU A 1 273 UNP P9WPE1 CITEL_MYCTU 1 273 SEQADV 6CHU MET A -7 UNP P9WPE1 INITIATING METHIONINE SEQADV 6CHU ALA A -6 UNP P9WPE1 EXPRESSION TAG SEQADV 6CHU HIS A -5 UNP P9WPE1 EXPRESSION TAG SEQADV 6CHU HIS A -4 UNP P9WPE1 EXPRESSION TAG SEQADV 6CHU HIS A -3 UNP P9WPE1 EXPRESSION TAG SEQADV 6CHU HIS A -2 UNP P9WPE1 EXPRESSION TAG SEQADV 6CHU HIS A -1 UNP P9WPE1 EXPRESSION TAG SEQADV 6CHU HIS A 0 UNP P9WPE1 EXPRESSION TAG SEQRES 1 A 281 MET ALA HIS HIS HIS HIS HIS HIS MET ASN LEU ARG ALA SEQRES 2 A 281 ALA GLY PRO GLY TRP LEU PHE CYS PRO ALA ASP ARG PRO SEQRES 3 A 281 GLU ARG PHE ALA LYS ALA ALA ALA ALA ALA ASP VAL VAL SEQRES 4 A 281 ILE LEU ASP LEU GLU ASP GLY VAL ALA GLU ALA GLN LYS SEQRES 5 A 281 PRO ALA ALA ARG ASN ALA LEU ARG ASP THR PRO LEU ASP SEQRES 6 A 281 PRO GLU ARG THR VAL VAL ARG ILE ASN ALA GLY GLY THR SEQRES 7 A 281 ALA ASP GLN ALA ARG ASP LEU GLU ALA LEU ALA GLY THR SEQRES 8 A 281 ALA TYR THR THR VAL MET LEU PRO LYS ALA GLU SER ALA SEQRES 9 A 281 ALA GLN VAL ILE GLU LEU ALA PRO ARG ASP VAL ILE ALA SEQRES 10 A 281 LEU VAL GLU THR ALA ARG GLY ALA VAL CYS ALA ALA GLU SEQRES 11 A 281 ILE ALA ALA ALA ASP PRO THR VAL GLY MET MET TRP GLY SEQRES 12 A 281 ALA GLU ASP LEU ILE ALA THR LEU GLY GLY SER SER SER SEQRES 13 A 281 ARG ARG ALA ASP GLY ALA TYR ARG ASP VAL ALA ARG HIS SEQRES 14 A 281 VAL ARG SER THR ILE LEU LEU ALA ALA SER ALA PHE GLY SEQRES 15 A 281 ARG LEU ALA LEU ASP ALA VAL HIS LEU ASP ILE LEU ASP SEQRES 16 A 281 VAL GLU GLY LEU GLN GLU GLU ALA ARG ASP ALA ALA ALA SEQRES 17 A 281 VAL GLY PHE ASP VAL THR VAL CYS ILE HIS PRO SER GLN SEQRES 18 A 281 ILE PRO VAL VAL ARG LYS ALA TYR ARG PRO SER HIS GLU SEQRES 19 A 281 LYS LEU ALA TRP ALA ARG ARG VAL LEU ALA ALA SER ARG SEQRES 20 A 281 SER GLU ARG GLY ALA PHE ALA PHE GLU GLY GLN MET VAL SEQRES 21 A 281 ASP SER PRO VAL LEU THR HIS ALA GLU THR MET LEU ARG SEQRES 22 A 281 ARG ALA GLY GLU ALA THR SER GLU HET MG A 301 1 HET ACT A 302 4 HET ACT A 303 4 HET ACT A 304 4 HET ACT A 305 4 HET EDO A 306 4 HETNAM MG MAGNESIUM ION HETNAM ACT ACETATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 MG MG 2+ FORMUL 3 ACT 4(C2 H3 O2 1-) FORMUL 7 EDO C2 H6 O2 FORMUL 8 HOH *164(H2 O) HELIX 1 AA1 ASN A 2 ALA A 6 5 5 HELIX 2 AA2 ARG A 17 GLU A 19 5 3 HELIX 3 AA3 ARG A 20 ALA A 28 1 9 HELIX 4 AA4 ALA A 40 ALA A 42 5 3 HELIX 5 AA5 GLN A 43 THR A 54 1 12 HELIX 6 AA6 THR A 70 GLY A 82 1 13 HELIX 7 AA7 SER A 95 GLU A 101 1 7 HELIX 8 AA8 THR A 113 CYS A 119 1 7 HELIX 9 AA9 CYS A 119 ALA A 126 1 8 HELIX 10 AB1 GLY A 135 GLY A 144 1 10 HELIX 11 AB2 ARG A 156 PHE A 173 1 18 HELIX 12 AB3 ASP A 187 GLY A 202 1 16 HELIX 13 AB4 SER A 212 TYR A 221 1 10 HELIX 14 AB5 ASP A 253 ARG A 265 1 13 SHEET 1 AA1 9 GLY A 9 PRO A 14 0 SHEET 2 AA1 9 VAL A 30 ASP A 34 1 O ILE A 32 N LEU A 11 SHEET 3 AA1 9 THR A 61 ARG A 64 1 O VAL A 62 N LEU A 33 SHEET 4 AA1 9 THR A 87 LEU A 90 1 O MET A 89 N VAL A 63 SHEET 5 AA1 9 ASP A 106 VAL A 111 1 O ILE A 108 N VAL A 88 SHEET 6 AA1 9 THR A 129 TRP A 134 1 O MET A 133 N VAL A 111 SHEET 7 AA1 9 LEU A 176 ASP A 179 1 O LEU A 178 N MET A 132 SHEET 8 AA1 9 VAL A 205 CYS A 208 1 O VAL A 205 N ASP A 179 SHEET 9 AA1 9 GLY A 9 PRO A 14 1 N TRP A 10 O CYS A 208 LINK OE1 GLU A 112 MG MG A 301 1555 1555 2.11 LINK OD2 ASP A 138 MG MG A 301 1555 1555 2.05 LINK MG MG A 301 OXT ACT A 305 1555 1555 2.02 LINK MG MG A 301 O HOH A 417 1555 1555 2.12 LINK MG MG A 301 O HOH A 434 1555 1555 2.09 LINK MG MG A 301 O HOH A 439 1555 1555 2.18 CISPEP 1 ALA A 103 PRO A 104 0 8.09 SITE 1 AC1 6 GLU A 112 ASP A 138 ACT A 305 HOH A 417 SITE 2 AC1 6 HOH A 434 HOH A 439 SITE 1 AC2 9 ARG A 150 ARG A 156 ASP A 157 VAL A 158 SITE 2 AC2 9 ARG A 163 VAL A 201 HOH A 406 HOH A 438 SITE 3 AC2 9 HOH A 450 SITE 1 AC3 2 ARG A 20 ALA A 24 SITE 1 AC4 5 ASP A 37 ARG A 64 ASP A 253 ACT A 305 SITE 2 AC4 5 HOH A 417 SITE 1 AC5 11 PHE A 12 ARG A 64 LEU A 110 GLU A 112 SITE 2 AC5 11 GLY A 135 MG A 301 ACT A 304 HOH A 417 SITE 3 AC5 11 HOH A 434 HOH A 439 HOH A 451 SITE 1 AC6 7 LEU A 80 THR A 83 TYR A 85 ARG A 105 SITE 2 AC6 7 HOH A 404 HOH A 437 HOH A 512 CRYST1 91.135 91.135 220.291 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010973 0.006335 0.000000 0.00000 SCALE2 0.000000 0.012670 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004539 0.00000