HEADER NUCLEAR PROTEIN/ANTAGONIST 23-FEB-18 6CHZ
TITLE ESTROGEN RECEPTOR ALPHA Y537S BOUND TO ANTAGONIST H3B-9224.
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: ESTROGEN RECEPTOR;
COMPND 3 CHAIN: A;
COMPND 4 SYNONYM: ER,ER-ALPHA,ESTRADIOL RECEPTOR,NUCLEAR RECEPTOR SUBFAMILY 3
COMPND 5 GROUP A MEMBER 1;
COMPND 6 ENGINEERED: YES;
COMPND 7 MUTATION: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: ESR1, ESR, NR3A1;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS NUCLEAR HORMONE RECEPTOR, ANTAGONIST, ACTIVATING MUTATION, BREAST
KEYWDS 2 CANCER, NUCLEAR PROTEIN, NUCLEAR PROTEIN-ANTAGONIST COMPLEX
EXPDTA X-RAY DIFFRACTION
AUTHOR N.A.LARSEN
REVDAT 5 13-MAR-24 6CHZ 1 REMARK
REVDAT 4 12-SEP-18 6CHZ 1 JRNL
REVDAT 3 29-AUG-18 6CHZ 1 JRNL
REVDAT 2 25-JUL-18 6CHZ 1 JRNL
REVDAT 1 21-MAR-18 6CHZ 0
JRNL AUTH X.PUYANG,C.FURMAN,G.Z.ZHENG,Z.J.WU,D.BANKA,K.AITHAL,
JRNL AUTH 2 S.AGOULNIK,D.M.BOLDUC,S.BUONAMICI,B.CALEB,S.DAS,S.ECKLEY,
JRNL AUTH 3 P.FEKKES,M.H.HAO,A.HART,R.HOUTMAN,S.IRWIN,J.J.JOSHI,C.KARR,
JRNL AUTH 4 A.KIM,N.KUMAR,P.KUMAR,G.KUZNETSOV,W.G.LAI,N.LARSEN,
JRNL AUTH 5 C.MACKENZIE,L.A.MARTIN,D.MELCHERS,A.MORIARTY,T.V.NGUYEN,
JRNL AUTH 6 J.NORRIS,M.O'SHEA,S.PANCHOLI,S.PRAJAPATI,S.RAJAGOPALAN,
JRNL AUTH 7 D.J.REYNOLDS,V.RIMKUNAS,N.RIOUX,R.RIBAS,A.SIU,S.SIVAKUMAR,
JRNL AUTH 8 V.SUBRAMANIAN,M.THOMAS,F.H.VAILLANCOURT,J.WANG,S.WARDELL,
JRNL AUTH 9 M.J.WICK,S.YAO,L.YU,M.WARMUTH,P.G.SMITH,P.ZHU,M.KORPAL
JRNL TITL DISCOVERY OF SELECTIVE ESTROGEN RECEPTOR COVALENT
JRNL TITL 2 ANTAGONISTS FOR THE TREATMENT OF ER ALPHAWTAND ER
JRNL TITL 3 ALPHAMUTBREAST CANCER.
JRNL REF CANCER DISCOV V. 8 1176 2018
JRNL REFN ESSN 2159-8290
JRNL PMID 29991605
JRNL DOI 10.1158/2159-8290.CD-17-1229
REMARK 2
REMARK 2 RESOLUTION. 1.68 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC 5.8.0158
REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,
REMARK 3 : NICHOLLS,WINN,LONG,VAGIN
REMARK 3
REMARK 3 REFINEMENT TARGET : NULL
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.68
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.76
REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7
REMARK 3 NUMBER OF REFLECTIONS : 31703
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.215
REMARK 3 R VALUE (WORKING SET) : 0.212
REMARK 3 FREE R VALUE : 0.262
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800
REMARK 3 FREE R VALUE TEST SET COUNT : 1597
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.68
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.72
REMARK 3 REFLECTION IN BIN (WORKING SET) : 2308
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.59
REMARK 3 BIN R VALUE (WORKING SET) : 0.3550
REMARK 3 BIN FREE R VALUE SET COUNT : 112
REMARK 3 BIN FREE R VALUE : 0.3760
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 1956
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 41
REMARK 3 SOLVENT ATOMS : 111
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.72
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : 0.00000
REMARK 3 B22 (A**2) : 0.00000
REMARK 3 B33 (A**2) : 0.00000
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): 0.111
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.117
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.096
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.009
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2085 ; 0.020 ; 0.019
REMARK 3 BOND LENGTHS OTHERS (A): 2016 ; 0.002 ; 0.020
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2829 ; 2.124 ; 1.998
REMARK 3 BOND ANGLES OTHERS (DEGREES): 4682 ; 1.146 ; 3.005
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 262 ; 6.295 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 85 ;38.309 ;24.118
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 394 ;15.369 ;15.000
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;21.320 ;15.000
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 328 ; 0.131 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2257 ; 0.011 ; 0.020
REMARK 3 GENERAL PLANES OTHERS (A): 401 ; 0.002 ; 0.020
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1001 ; 3.987 ; 4.183
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1000 ; 3.976 ; 4.179
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1254 ; 5.232 ; 6.259
REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1255 ; 5.232 ; 6.262
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1083 ; 4.921 ; 4.594
REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1083 ; 4.909 ; 4.595
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1566 ; 6.904 ; 6.710
REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2398 ;13.021 ;50.174
REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2399 ;13.019 ;50.173
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : NULL
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : NULL
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.20
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING
REMARK 3 POSITIONS
REMARK 4
REMARK 4 6CHZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-FEB-18.
REMARK 100 THE DEPOSITION ID IS D_1000232797.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 12-NOV-16
REMARK 200 TEMPERATURE (KELVIN) : 120
REMARK 200 PH : NULL
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : APS
REMARK 200 BEAMLINE : 21-ID-F
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.9787
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225-HS
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000
REMARK 200 DATA SCALING SOFTWARE : HKL-2000
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33396
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.680
REMARK 200 RESOLUTION RANGE LOW (A) : 50.760
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6
REMARK 200 DATA REDUNDANCY : 9.400
REMARK 200 R MERGE (I) : 0.10900
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.7000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.68
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : 0.86600
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL
REMARK 200 SOFTWARE USED: MOLREP
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 49.65
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 6-12% PEG 3350, 50-150 MM MGCL2, 0.1 M
REMARK 280 IMIDAZOLE PH 7.1, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 296K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -Y,X-Y,Z+2/3
REMARK 290 3555 -X+Y,-X,Z+1/3
REMARK 290 4555 -X,-Y,Z+1/2
REMARK 290 5555 Y,-X+Y,Z+1/6
REMARK 290 6555 X-Y,X,Z+5/6
REMARK 290 7555 Y,X,-Z+2/3
REMARK 290 8555 X-Y,-Y,-Z
REMARK 290 9555 -X,-X+Y,-Z+1/3
REMARK 290 10555 -Y,-X,-Z+1/6
REMARK 290 11555 -X+Y,Y,-Z+1/2
REMARK 290 12555 X,X-Y,-Z+5/6
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 184.20200
REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 92.10100
REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 138.15150
REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 46.05050
REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 230.25250
REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 184.20200
REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 92.10100
REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 46.05050
REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 138.15150
REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 230.25250
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 3420 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 23020 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 -29.30400
REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 50.75602
REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -46.05050
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A 292
REMARK 465 GLY A 293
REMARK 465 HIS A 294
REMARK 465 HIS A 295
REMARK 465 HIS A 296
REMARK 465 HIS A 297
REMARK 465 HIS A 298
REMARK 465 HIS A 299
REMARK 465 GLU A 300
REMARK 465 ASN A 301
REMARK 465 LEU A 302
REMARK 465 TYR A 303
REMARK 465 PHE A 304
REMARK 465 GLN A 305
REMARK 465 PRO A 552
REMARK 465 THR A 553
REMARK 465 SER A 554
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 LEU A 462 CG CD1 CD2
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 NH2 ARG A 352 O HOH A 701 1.84
REMARK 500 O HOH A 745 O HOH A 809 2.14
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375
REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.
REMARK 500
REMARK 500 DISTANCE CUTOFF:
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE
REMARK 500 O HOH A 792 O HOH A 792 8555 2.09
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 ARG A 352 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES
REMARK 500 ASP A 411 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES
REMARK 500 ARG A 436 NE - CZ - NH1 ANGL. DEV. = 5.4 DEGREES
REMARK 500 MET A 522 CG - SD - CE ANGL. DEV. = -13.8 DEGREES
REMARK 500 ASP A 545 CB - CG - OD1 ANGL. DEV. = -5.7 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 LEU A 408 80.65 -153.88
REMARK 500 MET A 421 -62.44 -26.96
REMARK 500 CYS A 530 68.97 -63.11
REMARK 500 LYS A 531 123.88 -21.91
REMARK 500 ASN A 532 100.58 13.08
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue F3D A 601
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 602
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 6CHW RELATED DB: PDB
REMARK 900 6CHW CONTAINS COVALENT MATCHED PAIR OF 9224
DBREF 6CHZ A 307 554 UNP P03372 ESR1_HUMAN 307 554
SEQADV 6CHZ MET A 292 UNP P03372 INITIATING METHIONINE
SEQADV 6CHZ GLY A 293 UNP P03372 EXPRESSION TAG
SEQADV 6CHZ HIS A 294 UNP P03372 EXPRESSION TAG
SEQADV 6CHZ HIS A 295 UNP P03372 EXPRESSION TAG
SEQADV 6CHZ HIS A 296 UNP P03372 EXPRESSION TAG
SEQADV 6CHZ HIS A 297 UNP P03372 EXPRESSION TAG
SEQADV 6CHZ HIS A 298 UNP P03372 EXPRESSION TAG
SEQADV 6CHZ HIS A 299 UNP P03372 EXPRESSION TAG
SEQADV 6CHZ GLU A 300 UNP P03372 EXPRESSION TAG
SEQADV 6CHZ ASN A 301 UNP P03372 EXPRESSION TAG
SEQADV 6CHZ LEU A 302 UNP P03372 EXPRESSION TAG
SEQADV 6CHZ TYR A 303 UNP P03372 EXPRESSION TAG
SEQADV 6CHZ PHE A 304 UNP P03372 EXPRESSION TAG
SEQADV 6CHZ GLN A 305 UNP P03372 EXPRESSION TAG
SEQADV 6CHZ LEU A 306 UNP P03372 EXPRESSION TAG
SEQADV 6CHZ SER A 381 UNP P03372 CYS 381 ENGINEERED MUTATION
SEQADV 6CHZ SER A 417 UNP P03372 CYS 417 ENGINEERED MUTATION
SEQADV 6CHZ SER A 537 UNP P03372 TYR 537 ENGINEERED MUTATION
SEQRES 1 A 263 MET GLY HIS HIS HIS HIS HIS HIS GLU ASN LEU TYR PHE
SEQRES 2 A 263 GLN LEU ALA LEU SER LEU THR ALA ASP GLN MET VAL SER
SEQRES 3 A 263 ALA LEU LEU ASP ALA GLU PRO PRO ILE LEU TYR SER GLU
SEQRES 4 A 263 TYR ASP PRO THR ARG PRO PHE SER GLU ALA SER MET MET
SEQRES 5 A 263 GLY LEU LEU THR ASN LEU ALA ASP ARG GLU LEU VAL HIS
SEQRES 6 A 263 MET ILE ASN TRP ALA LYS ARG VAL PRO GLY PHE VAL ASP
SEQRES 7 A 263 LEU THR LEU HIS ASP GLN VAL HIS LEU LEU GLU SER ALA
SEQRES 8 A 263 TRP LEU GLU ILE LEU MET ILE GLY LEU VAL TRP ARG SER
SEQRES 9 A 263 MET GLU HIS PRO GLY LYS LEU LEU PHE ALA PRO ASN LEU
SEQRES 10 A 263 LEU LEU ASP ARG ASN GLN GLY LYS SER VAL GLU GLY MET
SEQRES 11 A 263 VAL GLU ILE PHE ASP MET LEU LEU ALA THR SER SER ARG
SEQRES 12 A 263 PHE ARG MET MET ASN LEU GLN GLY GLU GLU PHE VAL CYS
SEQRES 13 A 263 LEU LYS SER ILE ILE LEU LEU ASN SER GLY VAL TYR THR
SEQRES 14 A 263 PHE LEU SER SER THR LEU LYS SER LEU GLU GLU LYS ASP
SEQRES 15 A 263 HIS ILE HIS ARG VAL LEU ASP LYS ILE THR ASP THR LEU
SEQRES 16 A 263 ILE HIS LEU MET ALA LYS ALA GLY LEU THR LEU GLN GLN
SEQRES 17 A 263 GLN HIS GLN ARG LEU ALA GLN LEU LEU LEU ILE LEU SER
SEQRES 18 A 263 HIS ILE ARG HIS MET SER ASN LYS GLY MET GLU HIS LEU
SEQRES 19 A 263 TYR SER MET LYS CYS LYS ASN VAL VAL PRO LEU SER ASP
SEQRES 20 A 263 LEU LEU LEU GLU MET LEU ASP ALA HIS ARG LEU HIS ALA
SEQRES 21 A 263 PRO THR SER
HET F3D A 601 37
HET EDO A 602 4
HETNAM F3D 4-[(2-{4-[(1E)-1-(1H-INDAZOL-5-YL)-2-PHENYLBUT-1-EN-1-
HETNAM 2 F3D YL]PHENOXY}ETHYL)AMINO]-N,N-DIMETHYLBUTANAMIDE
HETNAM EDO 1,2-ETHANEDIOL
HETSYN EDO ETHYLENE GLYCOL
FORMUL 2 F3D C31 H36 N4 O2
FORMUL 3 EDO C2 H6 O2
FORMUL 4 HOH *111(H2 O)
HELIX 1 AA1 LEU A 306 LEU A 310 5 5
HELIX 2 AA2 THR A 311 ALA A 322 1 12
HELIX 3 AA3 SER A 341 ARG A 363 1 23
HELIX 4 AA4 GLY A 366 LEU A 370 5 5
HELIX 5 AA5 THR A 371 SER A 395 1 25
HELIX 6 AA6 ASN A 413 VAL A 418 5 6
HELIX 7 AA7 GLY A 420 ASN A 439 1 20
HELIX 8 AA8 GLN A 441 SER A 456 1 16
HELIX 9 AA9 THR A 465 ALA A 493 1 29
HELIX 10 AB1 THR A 496 MET A 528 1 33
HELIX 11 AB2 PRO A 535 ASP A 545 1 11
SHEET 1 AA1 2 LYS A 401 ALA A 405 0
SHEET 2 AA1 2 LEU A 408 ASP A 411 -1 O LEU A 410 N LEU A 402
SITE 1 AC1 9 LEU A 346 THR A 347 ALA A 350 ASP A 351
SITE 2 AC1 9 GLU A 353 LEU A 387 ARG A 394 LEU A 428
SITE 3 AC1 9 GLY A 521
SITE 1 AC2 8 ILE A 386 LEU A 387 GLY A 390 PHE A 445
SITE 2 AC2 8 LYS A 449 HOH A 709 HOH A 772 HOH A 784
CRYST1 58.608 58.608 276.303 90.00 90.00 120.00 P 65 2 2 12
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.017063 0.009851 0.000000 0.00000
SCALE2 0.000000 0.019702 0.000000 0.00000
SCALE3 0.000000 0.000000 0.003619 0.00000