HEADER OXIDOREDUCTASE 23-FEB-18 6CI8 TITLE STRUCTURE OF THE MICROCOMPARTMENT-ASSOCIATED AMINOACETONE TITLE 2 DEHYDROGENASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] REDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.1.1.100; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM SMEGMATIS (STRAIN ATCC 700084 / SOURCE 3 MC(2)155); SOURCE 4 ORGANISM_TAXID: 246196; SOURCE 5 STRAIN: ATCC 700084 / MC(2)155; SOURCE 6 GENE: MSMEG_0269; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS DEHYDROGENASE, SHORT-CHAIN DEHYDROGENASE/REDUCTASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR E.MALLETTE,M.S.KIMBER REVDAT 5 04-OCT-23 6CI8 1 REMARK REVDAT 4 08-JAN-20 6CI8 1 REMARK REVDAT 3 20-FEB-19 6CI8 1 REMARK REVDAT 2 11-JUL-18 6CI8 1 JRNL REVDAT 1 30-MAY-18 6CI8 0 JRNL AUTH E.MALLETTE,M.S.KIMBER JRNL TITL STRUCTURE AND KINETICS OF THE S-(+)-1-AMINO-2-PROPANOL JRNL TITL 2 DEHYDROGENASE FROM THE RMM MICROCOMPARTMENT OF MYCOBACTERIUM JRNL TITL 3 SMEGMATIS. JRNL REF BIOCHEMISTRY V. 57 3780 2018 JRNL REFN ISSN 1520-4995 JRNL PMID 29757625 JRNL DOI 10.1021/ACS.BIOCHEM.8B00464 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.14 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 56008 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.145 REMARK 3 R VALUE (WORKING SET) : 0.144 REMARK 3 FREE R VALUE : 0.170 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2801 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.1531 - 4.6130 1.00 2823 149 0.1497 0.1779 REMARK 3 2 4.6130 - 3.6620 1.00 2700 142 0.1236 0.1349 REMARK 3 3 3.6620 - 3.1992 1.00 2694 142 0.1358 0.1406 REMARK 3 4 3.1992 - 2.9068 1.00 2679 141 0.1440 0.1649 REMARK 3 5 2.9068 - 2.6984 1.00 2672 141 0.1437 0.1828 REMARK 3 6 2.6984 - 2.5394 1.00 2651 139 0.1417 0.1662 REMARK 3 7 2.5394 - 2.4122 1.00 2684 141 0.1407 0.1610 REMARK 3 8 2.4122 - 2.3072 1.00 2638 139 0.1320 0.1681 REMARK 3 9 2.3072 - 2.2184 1.00 2659 140 0.1358 0.1627 REMARK 3 10 2.2184 - 2.1418 1.00 2657 140 0.1325 0.1737 REMARK 3 11 2.1418 - 2.0749 1.00 2641 139 0.1380 0.1683 REMARK 3 12 2.0749 - 2.0156 1.00 2622 138 0.1453 0.1852 REMARK 3 13 2.0156 - 1.9625 1.00 2639 139 0.1437 0.1770 REMARK 3 14 1.9625 - 1.9146 1.00 2644 139 0.1507 0.1816 REMARK 3 15 1.9146 - 1.8711 1.00 2651 140 0.1508 0.1915 REMARK 3 16 1.8711 - 1.8313 1.00 2607 137 0.1570 0.1765 REMARK 3 17 1.8313 - 1.7946 1.00 2649 139 0.1725 0.2059 REMARK 3 18 1.7946 - 1.7608 1.00 2646 139 0.1804 0.2047 REMARK 3 19 1.7608 - 1.7293 1.00 2649 140 0.1986 0.2471 REMARK 3 20 1.7293 - 1.7000 1.00 2604 137 0.2132 0.2554 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.510 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.017 3914 REMARK 3 ANGLE : 1.333 5341 REMARK 3 CHIRALITY : 0.100 639 REMARK 3 PLANARITY : 0.008 709 REMARK 3 DIHEDRAL : 8.492 3121 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 29 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.7798 76.0077 43.4233 REMARK 3 T TENSOR REMARK 3 T11: 0.0558 T22: 0.2484 REMARK 3 T33: 0.1922 T12: -0.0146 REMARK 3 T13: 0.0186 T23: 0.0233 REMARK 3 L TENSOR REMARK 3 L11: 2.4225 L22: 1.5683 REMARK 3 L33: 1.6086 L12: -0.0345 REMARK 3 L13: -0.6537 L23: -0.5762 REMARK 3 S TENSOR REMARK 3 S11: -0.0515 S12: -0.2924 S13: -0.1468 REMARK 3 S21: 0.0573 S22: 0.1012 S23: 0.2910 REMARK 3 S31: 0.0194 S32: -0.3599 S33: -0.0010 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 30 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.2504 73.8093 33.4246 REMARK 3 T TENSOR REMARK 3 T11: 0.0882 T22: 0.2963 REMARK 3 T33: 0.3126 T12: -0.0492 REMARK 3 T13: -0.0078 T23: -0.0057 REMARK 3 L TENSOR REMARK 3 L11: 2.8459 L22: 2.7238 REMARK 3 L33: 4.2692 L12: 1.2026 REMARK 3 L13: 0.4981 L23: 1.3257 REMARK 3 S TENSOR REMARK 3 S11: -0.0965 S12: 0.1186 S13: -0.3731 REMARK 3 S21: -0.0629 S22: 0.1000 S23: 0.3810 REMARK 3 S31: 0.2691 S32: -0.4543 S33: 0.0036 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.6774 77.3479 33.7491 REMARK 3 T TENSOR REMARK 3 T11: 0.0482 T22: 0.2830 REMARK 3 T33: 0.2646 T12: -0.0396 REMARK 3 T13: -0.0097 T23: 0.0159 REMARK 3 L TENSOR REMARK 3 L11: 3.2814 L22: 1.4087 REMARK 3 L33: 3.2809 L12: 0.0983 REMARK 3 L13: -2.5668 L23: -0.2843 REMARK 3 S TENSOR REMARK 3 S11: 0.0783 S12: -0.0395 S13: -0.0565 REMARK 3 S21: -0.0464 S22: 0.0468 S23: 0.3904 REMARK 3 S31: 0.0183 S32: -0.3978 S33: -0.0515 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 68 THROUGH 178 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.1937 73.2113 29.7877 REMARK 3 T TENSOR REMARK 3 T11: 0.0785 T22: 0.1453 REMARK 3 T33: 0.1124 T12: -0.0318 REMARK 3 T13: -0.0098 T23: -0.0145 REMARK 3 L TENSOR REMARK 3 L11: 0.9081 L22: 0.9958 REMARK 3 L33: 0.5241 L12: -0.3770 REMARK 3 L13: 0.2116 L23: -0.1883 REMARK 3 S TENSOR REMARK 3 S11: 0.0301 S12: 0.1014 S13: -0.0696 REMARK 3 S21: -0.0959 S22: -0.0158 S23: 0.1609 REMARK 3 S31: 0.1001 S32: -0.1204 S33: 0.0020 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 179 THROUGH 199 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.3848 64.2944 38.4106 REMARK 3 T TENSOR REMARK 3 T11: 0.1251 T22: 0.1977 REMARK 3 T33: 0.2408 T12: -0.0814 REMARK 3 T13: -0.0544 T23: -0.0054 REMARK 3 L TENSOR REMARK 3 L11: 2.3639 L22: 2.9647 REMARK 3 L33: 1.9337 L12: 0.4682 REMARK 3 L13: -0.6771 L23: -0.6672 REMARK 3 S TENSOR REMARK 3 S11: -0.0996 S12: 0.1314 S13: -0.3989 REMARK 3 S21: -0.3894 S22: 0.1086 S23: 0.4728 REMARK 3 S31: 0.3735 S32: -0.4128 S33: 0.1322 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 200 THROUGH 217 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.4249 50.3806 43.3957 REMARK 3 T TENSOR REMARK 3 T11: 0.3080 T22: 0.2672 REMARK 3 T33: 0.4773 T12: -0.1782 REMARK 3 T13: 0.0031 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 1.9542 L22: 3.5846 REMARK 3 L33: 2.3778 L12: 0.7197 REMARK 3 L13: 0.2417 L23: 0.0712 REMARK 3 S TENSOR REMARK 3 S11: 0.0323 S12: 0.1442 S13: -0.8779 REMARK 3 S21: -0.3566 S22: -0.0440 S23: 0.3987 REMARK 3 S31: 0.7169 S32: -0.5258 S33: 0.0071 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 218 THROUGH 238 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.1386 75.1914 46.9303 REMARK 3 T TENSOR REMARK 3 T11: 0.0840 T22: 0.1630 REMARK 3 T33: 0.1040 T12: -0.0049 REMARK 3 T13: 0.0146 T23: -0.0101 REMARK 3 L TENSOR REMARK 3 L11: 2.4654 L22: 1.6647 REMARK 3 L33: 0.8475 L12: 0.9737 REMARK 3 L13: 0.2992 L23: -0.0643 REMARK 3 S TENSOR REMARK 3 S11: -0.0184 S12: -0.2252 S13: 0.0379 REMARK 3 S21: 0.0828 S22: -0.0069 S23: 0.1197 REMARK 3 S31: 0.0425 S32: -0.2374 S33: 0.0084 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 239 THROUGH 258 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.8105 53.6820 44.9468 REMARK 3 T TENSOR REMARK 3 T11: 0.1915 T22: 0.1420 REMARK 3 T33: 0.1923 T12: -0.0767 REMARK 3 T13: 0.0311 T23: 0.0099 REMARK 3 L TENSOR REMARK 3 L11: 2.3418 L22: 8.4550 REMARK 3 L33: 1.9183 L12: -0.3476 REMARK 3 L13: 0.3106 L23: 0.0429 REMARK 3 S TENSOR REMARK 3 S11: -0.0701 S12: -0.0937 S13: -0.5823 REMARK 3 S21: 0.0044 S22: 0.1161 S23: 0.0863 REMARK 3 S31: 0.4591 S32: -0.2066 S33: -0.0618 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 51.1337 61.4881 12.5117 REMARK 3 T TENSOR REMARK 3 T11: 0.3064 T22: 0.3401 REMARK 3 T33: 0.1235 T12: 0.1020 REMARK 3 T13: 0.0640 T23: -0.0050 REMARK 3 L TENSOR REMARK 3 L11: 2.3240 L22: 1.5160 REMARK 3 L33: 2.0273 L12: -1.0264 REMARK 3 L13: 0.5123 L23: 0.4756 REMARK 3 S TENSOR REMARK 3 S11: 0.2148 S12: 0.6631 S13: 0.1692 REMARK 3 S21: -0.4013 S22: -0.2651 S23: -0.2242 REMARK 3 S31: 0.1153 S32: 0.3520 S33: 0.0261 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 51 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 47.3504 62.4901 7.1577 REMARK 3 T TENSOR REMARK 3 T11: 0.3714 T22: 0.5003 REMARK 3 T33: 0.1168 T12: 0.1382 REMARK 3 T13: 0.0810 T23: 0.0079 REMARK 3 L TENSOR REMARK 3 L11: 4.9511 L22: 0.8866 REMARK 3 L33: 1.4841 L12: -1.1372 REMARK 3 L13: -1.4991 L23: 0.9132 REMARK 3 S TENSOR REMARK 3 S11: 0.0911 S12: 0.3723 S13: 0.0890 REMARK 3 S21: -0.4009 S22: -0.1556 S23: -0.1790 REMARK 3 S31: 0.1156 S32: 0.2059 S33: -0.0181 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 68 THROUGH 133 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.7334 63.7047 14.5832 REMARK 3 T TENSOR REMARK 3 T11: 0.2632 T22: 0.2582 REMARK 3 T33: 0.0753 T12: 0.0431 REMARK 3 T13: -0.0212 T23: -0.0583 REMARK 3 L TENSOR REMARK 3 L11: 1.1526 L22: 1.4074 REMARK 3 L33: 0.4329 L12: -0.6281 REMARK 3 L13: -0.0186 L23: -0.0928 REMARK 3 S TENSOR REMARK 3 S11: 0.1602 S12: 0.4895 S13: -0.0105 REMARK 3 S21: -0.3396 S22: -0.1748 S23: 0.0422 REMARK 3 S31: 0.1815 S32: 0.0433 S33: 0.0478 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 134 THROUGH 199 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.2854 65.2008 25.5910 REMARK 3 T TENSOR REMARK 3 T11: 0.1181 T22: 0.1083 REMARK 3 T33: 0.0637 T12: 0.0085 REMARK 3 T13: 0.0079 T23: -0.0102 REMARK 3 L TENSOR REMARK 3 L11: 1.2835 L22: 1.5284 REMARK 3 L33: 1.4174 L12: -0.4011 REMARK 3 L13: 0.3388 L23: 0.6549 REMARK 3 S TENSOR REMARK 3 S11: 0.0853 S12: 0.2416 S13: -0.0233 REMARK 3 S21: -0.1388 S22: -0.0715 S23: -0.0731 REMARK 3 S31: 0.1509 S32: 0.0363 S33: 0.0212 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 200 THROUGH 258 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.6711 68.6720 32.5336 REMARK 3 T TENSOR REMARK 3 T11: 0.0855 T22: 0.0849 REMARK 3 T33: 0.1194 T12: 0.0274 REMARK 3 T13: 0.0028 T23: 0.0295 REMARK 3 L TENSOR REMARK 3 L11: 1.7806 L22: 2.3571 REMARK 3 L33: 1.5626 L12: 0.5000 REMARK 3 L13: 0.0366 L23: -0.0614 REMARK 3 S TENSOR REMARK 3 S11: 0.0303 S12: 0.1092 S13: 0.2421 REMARK 3 S21: -0.1181 S22: -0.0840 S23: -0.0898 REMARK 3 S31: -0.0777 S32: 0.0950 S33: 0.0297 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6CI8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1000232799. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56008 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 45.137 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.208 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.8600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.21 REMARK 200 R MERGE FOR SHELL (I) : 0.68000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.040 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER, RESOLVE REMARK 200 STARTING MODEL: 3RIH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRI-SODIUM CITRATE, PH 6.3, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 26.95333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 53.90667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 53.90667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 26.95333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -182.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 80.86000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 674 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 635 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 638 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 652 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 697 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 681 O HOH A 697 1.80 REMARK 500 OE2 GLU B 258 O HOH B 401 1.85 REMARK 500 NH2 ARG A 55 O HOH A 401 1.89 REMARK 500 O HOH B 417 O HOH B 577 1.90 REMARK 500 O HOH B 449 O HOH B 515 1.95 REMARK 500 N MET B 1 O HOH B 402 1.97 REMARK 500 O HOH A 413 O HOH A 424 1.98 REMARK 500 OE1 GLN B 205 O HOH B 403 2.02 REMARK 500 O HOH A 415 O HOH A 564 2.04 REMARK 500 O HOH A 569 O HOH A 572 2.05 REMARK 500 NH2 ARG B 62 O HOH B 404 2.07 REMARK 500 O HOH B 463 O HOH B 624 2.08 REMARK 500 O HOH B 552 O HOH B 688 2.08 REMARK 500 O HOH A 420 O HOH A 607 2.09 REMARK 500 O HOH A 705 O HOH B 695 2.09 REMARK 500 O MET A 1 O HOH A 402 2.11 REMARK 500 O HOH A 549 O HOH A 569 2.15 REMARK 500 O HOH A 477 O HOH A 701 2.17 REMARK 500 O HOH B 419 O HOH B 612 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 417 O HOH B 417 4556 1.77 REMARK 500 O HOH A 413 O HOH A 413 4556 2.07 REMARK 500 OG SER A -1 OE2 GLU B 6 4556 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 169 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG A 169 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG A 214 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 LEU B 112 CB - CG - CD2 ANGL. DEV. = -12.3 DEGREES REMARK 500 ARG B 214 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 1 -101.29 -98.89 REMARK 500 PHE A 95 53.54 -142.94 REMARK 500 HIS A 135 44.88 -149.48 REMARK 500 SER A 142 -132.53 -100.09 REMARK 500 ILE A 148 -52.86 -123.37 REMARK 500 ASP A 244 12.88 -151.86 REMARK 500 PHE B 95 52.80 -144.25 REMARK 500 HIS B 135 43.51 -149.23 REMARK 500 SER B 142 -137.40 -97.55 REMARK 500 ILE B 148 -56.79 -126.31 REMARK 500 ASP B 244 9.17 -150.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 706 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH B 697 DISTANCE = 6.10 ANGSTROMS REMARK 525 HOH B 698 DISTANCE = 6.19 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 301 DBREF 6CI8 A 1 259 UNP A0QP46 A0QP46_MYCS2 1 259 DBREF 6CI8 B 1 259 UNP A0QP46 A0QP46_MYCS2 1 259 SEQADV 6CI8 GLY A -2 UNP A0QP46 EXPRESSION TAG SEQADV 6CI8 SER A -1 UNP A0QP46 EXPRESSION TAG SEQADV 6CI8 HIS A 0 UNP A0QP46 EXPRESSION TAG SEQADV 6CI8 GLY B -2 UNP A0QP46 EXPRESSION TAG SEQADV 6CI8 SER B -1 UNP A0QP46 EXPRESSION TAG SEQADV 6CI8 HIS B 0 UNP A0QP46 EXPRESSION TAG SEQRES 1 A 262 GLY SER HIS MET PHE THR SER LEU GLU GLY ARG SER ALA SEQRES 2 A 262 ILE VAL THR GLY GLY SER LYS GLY ILE GLY ARG GLY ILE SEQRES 3 A 262 ALA GLU THR PHE ALA ASN ALA GLY VAL ASP VAL VAL ILE SEQRES 4 A 262 THR GLY ARG ASN GLN ASP ASP LEU ASP ARG THR VAL ALA SEQRES 5 A 262 ASP LEU SER GLY THR ARG GLY LYS VAL THR ALA VAL ARG SEQRES 6 A 262 ALA ASP VAL THR ASP PRO GLU ASP ALA ARG ARG THR VAL SEQRES 7 A 262 ALA GLU THR VAL SER ARG HIS GLY GLY LEU ASP ILE VAL SEQRES 8 A 262 CYS ALA ASN ALA GLY ILE PHE PRO SER GLY ARG LEU GLU SEQRES 9 A 262 ASP LEU THR PRO ASP ASP ILE GLU GLN VAL LEU GLY VAL SEQRES 10 A 262 ASN PHE LYS GLY THR VAL TYR ILE VAL GLN ALA ALA LEU SEQRES 11 A 262 GLN ALA LEU THR ALA SER GLY HIS GLY ARG VAL VAL VAL SEQRES 12 A 262 THR SER SER ILE THR GLY PRO ILE THR GLY TYR PRO GLY SEQRES 13 A 262 TRP SER HIS TYR GLY ALA SER LYS ALA ALA GLN LEU GLY SEQRES 14 A 262 PHE LEU ARG THR ALA ALA MET GLU LEU ALA PRO LYS LYS SEQRES 15 A 262 ILE THR ILE ASN ALA VAL LEU PRO GLY ASN ILE MET THR SEQRES 16 A 262 GLU GLY LEU ASP GLU MET GLY GLN ASP TYR LEU ASP GLN SEQRES 17 A 262 MET ALA SER ALA ILE PRO ALA GLY ARG LEU GLY SER VAL SEQRES 18 A 262 ALA ASP ILE GLY ASN ALA ALA LEU PHE PHE ALA THR ASP SEQRES 19 A 262 GLU ALA ALA TYR VAL THR GLY GLN THR LEU VAL VAL ASP SEQRES 20 A 262 GLY GLY GLN VAL LEU PRO GLU SER HIS LEU ALA ILE ALA SEQRES 21 A 262 GLU LEU SEQRES 1 B 262 GLY SER HIS MET PHE THR SER LEU GLU GLY ARG SER ALA SEQRES 2 B 262 ILE VAL THR GLY GLY SER LYS GLY ILE GLY ARG GLY ILE SEQRES 3 B 262 ALA GLU THR PHE ALA ASN ALA GLY VAL ASP VAL VAL ILE SEQRES 4 B 262 THR GLY ARG ASN GLN ASP ASP LEU ASP ARG THR VAL ALA SEQRES 5 B 262 ASP LEU SER GLY THR ARG GLY LYS VAL THR ALA VAL ARG SEQRES 6 B 262 ALA ASP VAL THR ASP PRO GLU ASP ALA ARG ARG THR VAL SEQRES 7 B 262 ALA GLU THR VAL SER ARG HIS GLY GLY LEU ASP ILE VAL SEQRES 8 B 262 CYS ALA ASN ALA GLY ILE PHE PRO SER GLY ARG LEU GLU SEQRES 9 B 262 ASP LEU THR PRO ASP ASP ILE GLU GLN VAL LEU GLY VAL SEQRES 10 B 262 ASN PHE LYS GLY THR VAL TYR ILE VAL GLN ALA ALA LEU SEQRES 11 B 262 GLN ALA LEU THR ALA SER GLY HIS GLY ARG VAL VAL VAL SEQRES 12 B 262 THR SER SER ILE THR GLY PRO ILE THR GLY TYR PRO GLY SEQRES 13 B 262 TRP SER HIS TYR GLY ALA SER LYS ALA ALA GLN LEU GLY SEQRES 14 B 262 PHE LEU ARG THR ALA ALA MET GLU LEU ALA PRO LYS LYS SEQRES 15 B 262 ILE THR ILE ASN ALA VAL LEU PRO GLY ASN ILE MET THR SEQRES 16 B 262 GLU GLY LEU ASP GLU MET GLY GLN ASP TYR LEU ASP GLN SEQRES 17 B 262 MET ALA SER ALA ILE PRO ALA GLY ARG LEU GLY SER VAL SEQRES 18 B 262 ALA ASP ILE GLY ASN ALA ALA LEU PHE PHE ALA THR ASP SEQRES 19 B 262 GLU ALA ALA TYR VAL THR GLY GLN THR LEU VAL VAL ASP SEQRES 20 B 262 GLY GLY GLN VAL LEU PRO GLU SER HIS LEU ALA ILE ALA SEQRES 21 B 262 GLU LEU HET CL A 301 1 HET CL B 301 1 HETNAM CL CHLORIDE ION FORMUL 3 CL 2(CL 1-) FORMUL 5 HOH *604(H2 O) HELIX 1 AA1 LYS A 17 ALA A 30 1 14 HELIX 2 AA2 ASN A 40 LEU A 51 1 12 HELIX 3 AA3 ASP A 67 GLY A 83 1 17 HELIX 4 AA4 ARG A 99 LEU A 103 5 5 HELIX 5 AA5 THR A 104 PHE A 116 1 13 HELIX 6 AA6 PHE A 116 GLY A 134 1 19 HELIX 7 AA7 TRP A 154 ALA A 176 1 23 HELIX 8 AA8 PRO A 177 LYS A 179 5 3 HELIX 9 AA9 GLU A 193 MET A 198 5 6 HELIX 10 AB1 GLY A 199 ALA A 209 1 11 HELIX 11 AB2 SER A 217 THR A 230 1 14 HELIX 12 AB3 ASP A 231 ALA A 234 5 4 HELIX 13 AB4 SER A 252 GLU A 258 1 7 HELIX 14 AB5 LYS B 17 ALA B 30 1 14 HELIX 15 AB6 ASN B 40 LEU B 51 1 12 HELIX 16 AB7 ASP B 67 GLY B 83 1 17 HELIX 17 AB8 ARG B 99 LEU B 103 5 5 HELIX 18 AB9 THR B 104 PHE B 116 1 13 HELIX 19 AC1 PHE B 116 GLY B 134 1 19 HELIX 20 AC2 TRP B 154 ALA B 176 1 23 HELIX 21 AC3 PRO B 177 LYS B 179 5 3 HELIX 22 AC4 GLY B 194 MET B 198 5 5 HELIX 23 AC5 GLY B 199 ALA B 209 1 11 HELIX 24 AC6 SER B 217 THR B 230 1 14 HELIX 25 AC7 ASP B 231 ALA B 234 5 4 HELIX 26 AC8 SER B 252 GLU B 258 1 7 SHEET 1 AA1 7 VAL A 58 ARG A 62 0 SHEET 2 AA1 7 ASP A 33 GLY A 38 1 N ILE A 36 O THR A 59 SHEET 3 AA1 7 SER A 9 VAL A 12 1 N ALA A 10 O ASP A 33 SHEET 4 AA1 7 ILE A 87 ALA A 90 1 O CYS A 89 N ILE A 11 SHEET 5 AA1 7 ARG A 137 THR A 141 1 O ARG A 137 N VAL A 88 SHEET 6 AA1 7 THR A 181 PRO A 187 1 O ASN A 183 N VAL A 140 SHEET 7 AA1 7 THR A 240 VAL A 243 1 O LEU A 241 N LEU A 186 SHEET 1 AA2 7 VAL B 58 ARG B 62 0 SHEET 2 AA2 7 ASP B 33 GLY B 38 1 N ILE B 36 O THR B 59 SHEET 3 AA2 7 SER B 9 VAL B 12 1 N VAL B 12 O VAL B 35 SHEET 4 AA2 7 ILE B 87 ALA B 90 1 O CYS B 89 N ILE B 11 SHEET 5 AA2 7 ARG B 137 THR B 141 1 O THR B 141 N ALA B 90 SHEET 6 AA2 7 THR B 181 PRO B 187 1 O ASN B 183 N VAL B 140 SHEET 7 AA2 7 THR B 240 VAL B 243 1 O LEU B 241 N LEU B 186 SITE 1 AC1 2 ARG A 169 CL B 301 SITE 1 AC2 2 CL A 301 ARG B 169 CRYST1 104.240 104.240 80.860 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009593 0.005539 0.000000 0.00000 SCALE2 0.000000 0.011077 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012367 0.00000