HEADER LYASE 26-FEB-18 6CJ4 TITLE CRYSTAL STRUCTURE OF PROTEIN CITE FROM MYCOBACTERIUM TUBERCULOSIS IN TITLE 2 COMPLEX WITH MAGNESIUM AND ACETOACETATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CITRATE LYASE SUBUNIT BETA-LIKE PROTEIN; COMPND 3 CHAIN: A; COMPND 4 EC: 4.1.-.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS H37RV; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 GENE: CITE, RV2498C; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN CITE, MYCOBACTERIUM TUBERCULOSIS, ACETOACETATE, TIM-BARREL, KEYWDS 2 LYASE EXPDTA X-RAY DIFFRACTION AUTHOR A.A.FEDOROV,E.V.FEDOROV,H.WANG,J.B.BONANNO,L.CARVALHO,S.C.ALMO REVDAT 7 25-OCT-23 6CJ4 1 REMARK REVDAT 6 01-MAR-23 6CJ4 1 SOURCE JRNL DBREF SEQADV REVDAT 5 29-JUL-20 6CJ4 1 AUTHOR LINK REVDAT 4 21-AUG-19 6CJ4 1 JRNL REVDAT 3 31-JUL-19 6CJ4 1 JRNL REVDAT 2 13-FEB-19 6CJ4 1 JRNL REVDAT 1 01-AUG-18 6CJ4 0 JRNL AUTH H.WANG,A.A.FEDOROV,E.V.FEDOROV,D.M.HUNT,A.RODGERS, JRNL AUTH 2 H.L.DOUGLAS,A.GARZA-GARCIA,J.B.BONANNO,S.C.ALMO, JRNL AUTH 3 L.P.S.DE CARVALHO JRNL TITL AN ESSENTIAL BIFUNCTIONAL ENZYME INMYCOBACTERIUM JRNL TITL 2 TUBERCULOSISFOR ITACONATE DISSIMILATION AND LEUCINE JRNL TITL 3 CATABOLISM. JRNL REF PROC.NATL.ACAD.SCI.USA V. 116 15907 2019 JRNL REFN ESSN 1091-6490 JRNL PMID 31320588 JRNL DOI 10.1073/PNAS.1906606116 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH H.WANG,A.A.FEDOROV,E.V.FEDOROV,D.M.HUNT,A.RODGERS, REMARK 1 AUTH 2 A.GARZA-GARCIA,J.B.BONANNO,S.C.ALMO REMARK 1 TITL DISCOVERY OF A NOVEL STEREOSPECIFIC BETA-HYDROXYACYL-COA REMARK 1 TITL 2 LYASE/THIOESTERASE SHARED BY THREE METABOLIC PATHWAYS IN REMARK 1 TITL 3 MYCOBACTERIUM TUBERCULOSIS REMARK 1 REF BIORXIV 2018 REMARK 1 REFN ISSN 2692-8205 REMARK 1 DOI 10.1101/322404 REMARK 2 REMARK 2 RESOLUTION. 1.73 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.73 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.110 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 72324 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.020 REMARK 3 FREE R VALUE TEST SET COUNT : 2911 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.5609 - 4.7666 0.96 3203 117 0.1815 0.1927 REMARK 3 2 4.7666 - 3.7859 1.00 3313 135 0.1455 0.1475 REMARK 3 3 3.7859 - 3.3081 1.00 3323 136 0.1704 0.2003 REMARK 3 4 3.3081 - 3.0059 1.00 3299 164 0.1847 0.2179 REMARK 3 5 3.0059 - 2.7906 1.00 3294 151 0.1894 0.2142 REMARK 3 6 2.7906 - 2.6262 1.00 3313 139 0.1893 0.2026 REMARK 3 7 2.6262 - 2.4948 1.00 3315 151 0.1781 0.2239 REMARK 3 8 2.4948 - 2.3862 1.00 3298 122 0.1682 0.1819 REMARK 3 9 2.3862 - 2.2944 1.00 3341 107 0.1611 0.1672 REMARK 3 10 2.2944 - 2.2152 1.00 3321 137 0.1632 0.1743 REMARK 3 11 2.2152 - 2.1460 1.00 3292 145 0.1703 0.2182 REMARK 3 12 2.1460 - 2.0847 1.00 3285 165 0.1791 0.1943 REMARK 3 13 2.0847 - 2.0298 1.00 3286 175 0.1789 0.2025 REMARK 3 14 2.0298 - 1.9803 1.00 3324 128 0.1853 0.2115 REMARK 3 15 1.9803 - 1.9353 1.00 3317 111 0.2070 0.1906 REMARK 3 16 1.9353 - 1.8941 1.00 3357 115 0.2310 0.2193 REMARK 3 17 1.8941 - 1.8562 1.00 3318 145 0.2591 0.3328 REMARK 3 18 1.8562 - 1.8212 1.00 3265 165 0.2757 0.2872 REMARK 3 19 1.8212 - 1.7887 1.00 3318 125 0.2929 0.2851 REMARK 3 20 1.7887 - 1.7584 1.00 3306 154 0.3122 0.3127 REMARK 3 21 1.7584 - 1.7300 1.00 3325 124 0.3223 0.3143 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.680 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1807 REMARK 3 ANGLE : 0.737 2462 REMARK 3 CHIRALITY : 0.051 292 REMARK 3 PLANARITY : 0.005 331 REMARK 3 DIHEDRAL : 13.851 1109 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESSEQ 1:224 REMARK 3 ORIGIN FOR THE GROUP (A): 24.2767 -25.4310 -17.6884 REMARK 3 T TENSOR REMARK 3 T11: 0.1559 T22: 0.2132 REMARK 3 T33: 0.1970 T12: 0.0034 REMARK 3 T13: -0.0151 T23: 0.0566 REMARK 3 L TENSOR REMARK 3 L11: 2.0606 L22: 1.0452 REMARK 3 L33: 1.7198 L12: 0.0297 REMARK 3 L13: -0.4594 L23: 0.0930 REMARK 3 S TENSOR REMARK 3 S11: 0.1036 S12: 0.1689 S13: -0.0011 REMARK 3 S21: -0.0411 S22: 0.0129 S23: 0.2104 REMARK 3 S31: -0.0078 S32: -0.2850 S33: -0.1033 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESSEQ 251:265 REMARK 3 ORIGIN FOR THE GROUP (A): 37.9663 -50.0095 -25.2197 REMARK 3 T TENSOR REMARK 3 T11: 0.8351 T22: 0.6055 REMARK 3 T33: 0.7067 T12: -0.1407 REMARK 3 T13: -0.1675 T23: -0.0821 REMARK 3 L TENSOR REMARK 3 L11: 3.3108 L22: 8.5069 REMARK 3 L33: 9.5625 L12: -5.1908 REMARK 3 L13: -2.9604 L23: 3.0378 REMARK 3 S TENSOR REMARK 3 S11: -0.2027 S12: 1.0420 S13: -1.3424 REMARK 3 S21: -0.6737 S22: -0.3799 S23: 0.9394 REMARK 3 S31: 0.5163 S32: -0.9869 S33: 0.5136 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6CJ4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1000232817. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-NOV-16 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 72324 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.730 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.73 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 6CHU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MAGNESIUM CHLORIDE, ACETOACETATE, REMARK 280 SODIUM ACETATE, PH 7.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 45.83650 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 26.46372 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 73.79533 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 45.83650 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 26.46372 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 73.79533 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 45.83650 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 26.46372 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 73.79533 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 45.83650 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 26.46372 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 73.79533 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 45.83650 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 26.46372 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 73.79533 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 45.83650 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 26.46372 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 73.79533 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 52.92743 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 147.59067 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 52.92743 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 147.59067 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 52.92743 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 147.59067 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 52.92743 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 147.59067 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 52.92743 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 147.59067 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 52.92743 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 147.59067 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -55.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 45.83650 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -79.39115 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 91.67300 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 HIS A 225 REMARK 465 GLU A 226 REMARK 465 LYS A 227 REMARK 465 LEU A 228 REMARK 465 ALA A 229 REMARK 465 TRP A 230 REMARK 465 ALA A 231 REMARK 465 ARG A 232 REMARK 465 ARG A 233 REMARK 465 VAL A 234 REMARK 465 LEU A 235 REMARK 465 ALA A 236 REMARK 465 ALA A 237 REMARK 465 SER A 238 REMARK 465 ARG A 239 REMARK 465 SER A 240 REMARK 465 GLU A 241 REMARK 465 ARG A 242 REMARK 465 GLY A 243 REMARK 465 ALA A 244 REMARK 465 PHE A 245 REMARK 465 ALA A 246 REMARK 465 PHE A 247 REMARK 465 GLU A 248 REMARK 465 GLY A 249 REMARK 465 GLN A 250 REMARK 465 ARG A 266 REMARK 465 ALA A 267 REMARK 465 GLY A 268 REMARK 465 GLU A 269 REMARK 465 ALA A 270 REMARK 465 THR A 271 REMARK 465 SER A 272 REMARK 465 GLU A 273 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 36 -122.75 -98.25 REMARK 500 GLU A 112 27.91 -154.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 112 OE1 REMARK 620 2 ASP A 138 OD2 92.9 REMARK 620 3 AAE A 303 O8 92.8 172.8 REMARK 620 4 AAE A 303 O1 88.6 91.9 83.9 REMARK 620 5 HOH A 410 O 84.3 93.6 91.3 171.2 REMARK 620 6 HOH A 420 O 175.0 84.7 89.9 95.8 91.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AAE A 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6CHU RELATED DB: PDB REMARK 900 RELATED ID: 6AS5 RELATED DB: PDB REMARK 900 RELATED ID: 6ARB RELATED DB: PDB REMARK 900 RELATED ID: 6AQ4 RELATED DB: PDB DBREF 6CJ4 A 1 273 UNP P9WPE1 CITEL_MYCTU 1 273 SEQADV 6CJ4 MET A -7 UNP P9WPE1 INITIATING METHIONINE SEQADV 6CJ4 ALA A -6 UNP P9WPE1 EXPRESSION TAG SEQADV 6CJ4 HIS A -5 UNP P9WPE1 EXPRESSION TAG SEQADV 6CJ4 HIS A -4 UNP P9WPE1 EXPRESSION TAG SEQADV 6CJ4 HIS A -3 UNP P9WPE1 EXPRESSION TAG SEQADV 6CJ4 HIS A -2 UNP P9WPE1 EXPRESSION TAG SEQADV 6CJ4 HIS A -1 UNP P9WPE1 EXPRESSION TAG SEQADV 6CJ4 HIS A 0 UNP P9WPE1 EXPRESSION TAG SEQRES 1 A 281 MET ALA HIS HIS HIS HIS HIS HIS MET ASN LEU ARG ALA SEQRES 2 A 281 ALA GLY PRO GLY TRP LEU PHE CYS PRO ALA ASP ARG PRO SEQRES 3 A 281 GLU ARG PHE ALA LYS ALA ALA ALA ALA ALA ASP VAL VAL SEQRES 4 A 281 ILE LEU ASP LEU GLU ASP GLY VAL ALA GLU ALA GLN LYS SEQRES 5 A 281 PRO ALA ALA ARG ASN ALA LEU ARG ASP THR PRO LEU ASP SEQRES 6 A 281 PRO GLU ARG THR VAL VAL ARG ILE ASN ALA GLY GLY THR SEQRES 7 A 281 ALA ASP GLN ALA ARG ASP LEU GLU ALA LEU ALA GLY THR SEQRES 8 A 281 ALA TYR THR THR VAL MET LEU PRO LYS ALA GLU SER ALA SEQRES 9 A 281 ALA GLN VAL ILE GLU LEU ALA PRO ARG ASP VAL ILE ALA SEQRES 10 A 281 LEU VAL GLU THR ALA ARG GLY ALA VAL CYS ALA ALA GLU SEQRES 11 A 281 ILE ALA ALA ALA ASP PRO THR VAL GLY MET MET TRP GLY SEQRES 12 A 281 ALA GLU ASP LEU ILE ALA THR LEU GLY GLY SER SER SER SEQRES 13 A 281 ARG ARG ALA ASP GLY ALA TYR ARG ASP VAL ALA ARG HIS SEQRES 14 A 281 VAL ARG SER THR ILE LEU LEU ALA ALA SER ALA PHE GLY SEQRES 15 A 281 ARG LEU ALA LEU ASP ALA VAL HIS LEU ASP ILE LEU ASP SEQRES 16 A 281 VAL GLU GLY LEU GLN GLU GLU ALA ARG ASP ALA ALA ALA SEQRES 17 A 281 VAL GLY PHE ASP VAL THR VAL CYS ILE HIS PRO SER GLN SEQRES 18 A 281 ILE PRO VAL VAL ARG LYS ALA TYR ARG PRO SER HIS GLU SEQRES 19 A 281 LYS LEU ALA TRP ALA ARG ARG VAL LEU ALA ALA SER ARG SEQRES 20 A 281 SER GLU ARG GLY ALA PHE ALA PHE GLU GLY GLN MET VAL SEQRES 21 A 281 ASP SER PRO VAL LEU THR HIS ALA GLU THR MET LEU ARG SEQRES 22 A 281 ARG ALA GLY GLU ALA THR SER GLU HET MG A 301 1 HET ACT A 302 4 HET AAE A 303 7 HETNAM MG MAGNESIUM ION HETNAM ACT ACETATE ION HETNAM AAE ACETOACETIC ACID FORMUL 2 MG MG 2+ FORMUL 3 ACT C2 H3 O2 1- FORMUL 4 AAE C4 H6 O3 FORMUL 5 HOH *132(H2 O) HELIX 1 AA1 ASN A 2 ALA A 6 5 5 HELIX 2 AA2 ARG A 17 GLU A 19 5 3 HELIX 3 AA3 ARG A 20 ALA A 28 1 9 HELIX 4 AA4 ALA A 40 ALA A 42 5 3 HELIX 5 AA5 GLN A 43 THR A 54 1 12 HELIX 6 AA6 THR A 70 GLY A 82 1 13 HELIX 7 AA7 SER A 95 GLU A 101 1 7 HELIX 8 AA8 THR A 113 CYS A 119 1 7 HELIX 9 AA9 CYS A 119 ALA A 126 1 8 HELIX 10 AB1 GLY A 135 LEU A 143 1 9 HELIX 11 AB2 ARG A 156 PHE A 173 1 18 HELIX 12 AB3 ASP A 187 GLY A 202 1 16 HELIX 13 AB4 SER A 212 TYR A 221 1 10 HELIX 14 AB5 ASP A 253 ARG A 265 1 13 SHEET 1 AA1 9 GLY A 9 PRO A 14 0 SHEET 2 AA1 9 VAL A 30 ASP A 34 1 O ILE A 32 N LEU A 11 SHEET 3 AA1 9 THR A 61 ARG A 64 1 O VAL A 62 N VAL A 31 SHEET 4 AA1 9 THR A 87 LEU A 90 1 O MET A 89 N VAL A 63 SHEET 5 AA1 9 ASP A 106 VAL A 111 1 O LEU A 110 N LEU A 90 SHEET 6 AA1 9 THR A 129 TRP A 134 1 O MET A 133 N VAL A 111 SHEET 7 AA1 9 LEU A 176 ASP A 179 1 O LEU A 178 N MET A 132 SHEET 8 AA1 9 VAL A 205 CYS A 208 1 O VAL A 205 N ASP A 179 SHEET 9 AA1 9 GLY A 9 PRO A 14 1 N TRP A 10 O CYS A 208 LINK OE1 GLU A 112 MG MG A 301 1555 1555 2.11 LINK OD2 ASP A 138 MG MG A 301 1555 1555 2.01 LINK MG MG A 301 O8 AAE A 303 1555 1555 2.11 LINK MG MG A 301 O1 AAE A 303 1555 1555 2.14 LINK MG MG A 301 O HOH A 410 1555 1555 2.12 LINK MG MG A 301 O HOH A 420 1555 1555 2.10 CISPEP 1 ALA A 103 PRO A 104 0 7.57 SITE 1 AC1 5 GLU A 112 ASP A 138 AAE A 303 HOH A 410 SITE 2 AC1 5 HOH A 420 SITE 1 AC2 4 ARG A 64 ASP A 253 AAE A 303 HOH A 420 SITE 1 AC3 14 PHE A 12 ARG A 64 LEU A 110 GLU A 112 SITE 2 AC3 14 GLY A 135 ALA A 136 GLU A 137 ASP A 138 SITE 3 AC3 14 ASP A 253 MG A 301 ACT A 302 HOH A 410 SITE 4 AC3 14 HOH A 420 HOH A 448 CRYST1 91.673 91.673 221.386 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010908 0.006298 0.000000 0.00000 SCALE2 0.000000 0.012596 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004517 0.00000