HEADER TRANSFERASE 14-MAR-18 6CQ4 TITLE TBK1 IN COMPLEX WITH CYCLOHEXYL ANALOG OF AMLEXANOX COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE TBK1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: NF-KAPPA-B-ACTIVATING KINASE,T2K,TANK-BINDING KINASE 1; COMPND 5 EC: 2.7.11.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TBK1, NAK; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: SF9; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PH7PFB KEYWDS TBK1, KINASE, AMLEXANOX, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR T.S.BEYETT,J.J.G.TESMER REVDAT 4 04-OCT-23 6CQ4 1 REMARK REVDAT 3 25-DEC-19 6CQ4 1 REMARK REVDAT 2 20-FEB-19 6CQ4 1 REMARK REVDAT 1 05-DEC-18 6CQ4 0 JRNL AUTH T.S.BEYETT,X.GAN,S.M.REILLY,A.V.GOMEZ,L.CHANG,J.J.G.TESMER, JRNL AUTH 2 A.R.SALTIEL,H.D.SHOWALTER JRNL TITL DESIGN, SYNTHESIS, AND BIOLOGICAL ACTIVITY OF SUBSTITUTED JRNL TITL 2 2-AMINO-5-OXO-5H-CHROMENO[2,3-B]PYRIDINE-3-CARBOXYLIC ACID JRNL TITL 3 DERIVATIVES AS INHIBITORS OF THE INFLAMMATORY KINASES TBK1 JRNL TITL 4 AND IKK EPSILON FOR THE TREATMENT OF OBESITY. JRNL REF BIOORG. MED. CHEM. V. 26 5443 2018 JRNL REFN ESSN 1464-3391 JRNL PMID 30270002 JRNL DOI 10.1016/J.BMC.2018.09.020 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 14823 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.235 REMARK 3 R VALUE (WORKING SET) : 0.233 REMARK 3 FREE R VALUE : 0.272 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 738 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.9850 - 6.8881 0.98 2648 135 0.1709 0.2084 REMARK 3 2 6.8881 - 5.4698 1.00 2684 136 0.2542 0.3476 REMARK 3 3 5.4698 - 4.7791 1.00 2699 140 0.2224 0.2481 REMARK 3 4 4.7791 - 4.3425 1.00 2695 134 0.2137 0.1983 REMARK 3 5 4.3425 - 4.0314 1.00 2694 138 0.2380 0.2959 REMARK 3 6 4.0314 - 3.7938 1.00 2660 142 0.2639 0.3023 REMARK 3 7 3.7938 - 3.6039 1.00 2694 150 0.2958 0.3198 REMARK 3 8 3.6039 - 3.4470 1.00 2658 146 0.3257 0.3676 REMARK 3 9 3.4470 - 3.3144 1.00 2675 139 0.3614 0.4354 REMARK 3 10 3.3144 - 3.2000 0.98 2657 136 0.3867 0.4512 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.660 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.260 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 117.5 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 149.3 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5013 REMARK 3 ANGLE : 0.389 6773 REMARK 3 CHIRALITY : 0.037 751 REMARK 3 PLANARITY : 0.003 860 REMARK 3 DIHEDRAL : 13.029 3019 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 115.6092 -11.7760 -6.7213 REMARK 3 T TENSOR REMARK 3 T11: 1.0218 T22: 1.6005 REMARK 3 T33: 1.4473 T12: 0.0467 REMARK 3 T13: -0.0341 T23: 0.0873 REMARK 3 L TENSOR REMARK 3 L11: 4.8728 L22: 7.5898 REMARK 3 L33: 6.5377 L12: 4.3147 REMARK 3 L13: -2.3963 L23: 1.2615 REMARK 3 S TENSOR REMARK 3 S11: 0.3642 S12: -0.1673 S13: -0.2317 REMARK 3 S21: 0.3641 S22: -0.0938 S23: -1.4717 REMARK 3 S31: 0.9303 S32: 0.0671 S33: -0.3328 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 61 THROUGH 145 ) REMARK 3 ORIGIN FOR THE GROUP (A): 101.2005 -16.7455 -2.6572 REMARK 3 T TENSOR REMARK 3 T11: 0.8088 T22: 1.3246 REMARK 3 T33: 1.2792 T12: 0.1366 REMARK 3 T13: -0.0161 T23: 0.0331 REMARK 3 L TENSOR REMARK 3 L11: 5.2127 L22: 2.9681 REMARK 3 L33: 3.5686 L12: 0.6467 REMARK 3 L13: -2.2590 L23: -0.3212 REMARK 3 S TENSOR REMARK 3 S11: -0.1441 S12: 0.5402 S13: -0.5195 REMARK 3 S21: -0.3587 S22: -0.1138 S23: -0.4583 REMARK 3 S31: 0.1701 S32: -0.1707 S33: 0.3135 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 146 THROUGH 284 ) REMARK 3 ORIGIN FOR THE GROUP (A): 94.7562 -30.7647 9.8755 REMARK 3 T TENSOR REMARK 3 T11: 1.0910 T22: 1.3093 REMARK 3 T33: 1.7282 T12: -0.1511 REMARK 3 T13: 0.0146 T23: 0.1017 REMARK 3 L TENSOR REMARK 3 L11: 0.0973 L22: 4.3905 REMARK 3 L33: 6.4059 L12: 0.4392 REMARK 3 L13: 0.1194 L23: -2.9073 REMARK 3 S TENSOR REMARK 3 S11: 0.1321 S12: 0.0387 S13: -0.7507 REMARK 3 S21: -0.0202 S22: -0.3999 S23: -0.6374 REMARK 3 S31: 1.3459 S32: -0.0013 S33: 0.4263 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 285 THROUGH 407 ) REMARK 3 ORIGIN FOR THE GROUP (A): 73.8095 -19.6793 10.4525 REMARK 3 T TENSOR REMARK 3 T11: 0.8676 T22: 1.7992 REMARK 3 T33: 1.4646 T12: -0.1405 REMARK 3 T13: -0.0046 T23: -0.1243 REMARK 3 L TENSOR REMARK 3 L11: 2.7024 L22: 1.8231 REMARK 3 L33: 1.6652 L12: -0.0730 REMARK 3 L13: 0.0424 L23: 0.9763 REMARK 3 S TENSOR REMARK 3 S11: 0.1876 S12: 0.5585 S13: -0.9368 REMARK 3 S21: -0.0598 S22: -0.4144 S23: 0.2781 REMARK 3 S31: 0.2432 S32: -0.8760 S33: 0.3241 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 408 THROUGH 604 ) REMARK 3 ORIGIN FOR THE GROUP (A): 70.6200 -7.8331 26.0638 REMARK 3 T TENSOR REMARK 3 T11: 0.7240 T22: 1.7233 REMARK 3 T33: 1.1196 T12: -0.0925 REMARK 3 T13: -0.0142 T23: 0.2746 REMARK 3 L TENSOR REMARK 3 L11: 4.0421 L22: 1.2259 REMARK 3 L33: 0.4112 L12: 2.6231 REMARK 3 L13: 2.0502 L23: 0.7062 REMARK 3 S TENSOR REMARK 3 S11: 0.2206 S12: -0.9586 S13: 0.6559 REMARK 3 S21: 0.0946 S22: -0.2896 S23: 0.1988 REMARK 3 S31: 0.1643 S32: -0.3221 S33: -0.0271 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 605 THROUGH 657 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.9929 -12.7517 23.2209 REMARK 3 T TENSOR REMARK 3 T11: 0.8624 T22: 2.4121 REMARK 3 T33: 1.4731 T12: -0.1677 REMARK 3 T13: 0.0407 T23: 0.1019 REMARK 3 L TENSOR REMARK 3 L11: 6.6073 L22: -0.6055 REMARK 3 L33: 1.7643 L12: 0.0026 REMARK 3 L13: 7.1632 L23: 0.5937 REMARK 3 S TENSOR REMARK 3 S11: 0.1838 S12: -1.6020 S13: -0.4945 REMARK 3 S21: -0.0341 S22: -0.1805 S23: 0.5011 REMARK 3 S31: 0.0592 S32: -0.7564 S33: -0.1112 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6CQ4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1000233210. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-AUG-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03312 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14851 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 47.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 20.24 REMARK 200 R MERGE (I) : 0.12100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.5900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 20.73 REMARK 200 R MERGE FOR SHELL (I) : 1.42800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.290 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4IM0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.5, 4% PEG 8000, 10% REMARK 280 DMSO, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.33667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.16833 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 28.16833 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 56.33667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ILE A 43 REMARK 465 SER A 44 REMARK 465 PHE A 45 REMARK 465 LEU A 46 REMARK 465 ARG A 47 REMARK 465 PRO A 48 REMARK 465 VAL A 49 REMARK 465 ASP A 50 REMARK 465 GLY A 159 REMARK 465 ALA A 160 REMARK 465 ALA A 161 REMARK 465 ARG A 162 REMARK 465 GLU A 163 REMARK 465 LEU A 164 REMARK 465 GLU A 165 REMARK 465 ASP A 166 REMARK 465 ASP A 167 REMARK 465 GLU A 168 REMARK 465 GLN A 169 REMARK 465 PHE A 170 REMARK 465 VAL A 171 REMARK 465 SER A 172 REMARK 465 LEU A 173 REMARK 465 TYR A 174 REMARK 465 ARG A 187 REMARK 465 ALA A 188 REMARK 465 VAL A 189 REMARK 465 LEU A 190 REMARK 465 ARG A 191 REMARK 465 LYS A 192 REMARK 465 ASP A 193 REMARK 465 HIS A 194 REMARK 465 GLN A 195 REMARK 465 LYS A 196 REMARK 465 LYS A 197 REMARK 465 TYR A 198 REMARK 465 GLY A 199 REMARK 465 ALA A 200 REMARK 465 THR A 201 REMARK 465 VAL A 202 REMARK 465 LYS A 480 REMARK 465 VAL A 481 REMARK 465 TYR A 482 REMARK 465 GLU A 483 REMARK 465 LYS A 484 REMARK 465 LEU A 485 REMARK 465 MET A 486 REMARK 465 LYS A 487 REMARK 465 ILE A 488 REMARK 465 ASN A 489 REMARK 465 LEU A 490 REMARK 465 GLU A 491 REMARK 465 ALA A 492 REMARK 465 ALA A 493 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 358 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 15 -78.91 -100.09 REMARK 500 LEU A 62 104.24 -58.88 REMARK 500 ARG A 134 -55.42 62.97 REMARK 500 THR A 156 -48.83 -148.33 REMARK 500 PRO A 223 -166.88 -70.43 REMARK 500 PRO A 227 70.74 -68.74 REMARK 500 ARG A 228 -94.00 -130.63 REMARK 500 ASN A 230 36.58 -85.18 REMARK 500 LYS A 241 78.85 17.90 REMARK 500 SER A 243 -88.78 59.83 REMARK 500 LEU A 532 15.51 -157.50 REMARK 500 GLU A 540 -73.12 -124.60 REMARK 500 GLU A 604 -52.81 -147.86 REMARK 500 TYR A 650 -80.75 -73.13 REMARK 500 GLU A 656 146.20 -170.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue F8P A 801 DBREF 6CQ4 A 1 657 UNP Q9UHD2 TBK1_HUMAN 1 657 SEQADV 6CQ4 SER A -2 UNP Q9UHD2 EXPRESSION TAG SEQADV 6CQ4 ASN A -1 UNP Q9UHD2 EXPRESSION TAG SEQADV 6CQ4 ALA A 0 UNP Q9UHD2 EXPRESSION TAG SEQRES 1 A 660 SER ASN ALA MET GLN SER THR SER ASN HIS LEU TRP LEU SEQRES 2 A 660 LEU SER ASP ILE LEU GLY GLN GLY ALA THR ALA ASN VAL SEQRES 3 A 660 PHE ARG GLY ARG HIS LYS LYS THR GLY ASP LEU PHE ALA SEQRES 4 A 660 ILE LYS VAL PHE ASN ASN ILE SER PHE LEU ARG PRO VAL SEQRES 5 A 660 ASP VAL GLN MET ARG GLU PHE GLU VAL LEU LYS LYS LEU SEQRES 6 A 660 ASN HIS LYS ASN ILE VAL LYS LEU PHE ALA ILE GLU GLU SEQRES 7 A 660 GLU THR THR THR ARG HIS LYS VAL LEU ILE MET GLU PHE SEQRES 8 A 660 CYS PRO CYS GLY SER LEU TYR THR VAL LEU GLU GLU PRO SEQRES 9 A 660 SER ASN ALA TYR GLY LEU PRO GLU SER GLU PHE LEU ILE SEQRES 10 A 660 VAL LEU ARG ASP VAL VAL GLY GLY MET ASN HIS LEU ARG SEQRES 11 A 660 GLU ASN GLY ILE VAL HIS ARG ASP ILE LYS PRO GLY ASN SEQRES 12 A 660 ILE MET ARG VAL ILE GLY GLU ASP GLY GLN SER VAL TYR SEQRES 13 A 660 LYS LEU THR ASP PHE GLY ALA ALA ARG GLU LEU GLU ASP SEQRES 14 A 660 ASP GLU GLN PHE VAL SER LEU TYR GLY THR GLU GLU TYR SEQRES 15 A 660 LEU HIS PRO ASP MET TYR GLU ARG ALA VAL LEU ARG LYS SEQRES 16 A 660 ASP HIS GLN LYS LYS TYR GLY ALA THR VAL ASP LEU TRP SEQRES 17 A 660 SER ILE GLY VAL THR PHE TYR HIS ALA ALA THR GLY SER SEQRES 18 A 660 LEU PRO PHE ARG PRO PHE GLU GLY PRO ARG ARG ASN LYS SEQRES 19 A 660 GLU VAL MET TYR LYS ILE ILE THR GLY LYS PRO SER GLY SEQRES 20 A 660 ALA ILE SER GLY VAL GLN LYS ALA GLU ASN GLY PRO ILE SEQRES 21 A 660 ASP TRP SER GLY ASP MET PRO VAL SER CYS SER LEU SER SEQRES 22 A 660 ARG GLY LEU GLN VAL LEU LEU THR PRO VAL LEU ALA ASN SEQRES 23 A 660 ILE LEU GLU ALA ASP GLN GLU LYS CYS TRP GLY PHE ASP SEQRES 24 A 660 GLN PHE PHE ALA GLU THR SER ASP ILE LEU HIS ARG MET SEQRES 25 A 660 VAL ILE HIS VAL PHE SER LEU GLN GLN MET THR ALA HIS SEQRES 26 A 660 LYS ILE TYR ILE HIS SER TYR ASN THR ALA THR ILE PHE SEQRES 27 A 660 HIS GLU LEU VAL TYR LYS GLN THR LYS ILE ILE SER SER SEQRES 28 A 660 ASN GLN GLU LEU ILE TYR GLU GLY ARG ARG LEU VAL LEU SEQRES 29 A 660 GLU PRO GLY ARG LEU ALA GLN HIS PHE PRO LYS THR THR SEQRES 30 A 660 GLU GLU ASN PRO ILE PHE VAL VAL SER ARG GLU PRO LEU SEQRES 31 A 660 ASN THR ILE GLY LEU ILE TYR GLU LYS ILE SER LEU PRO SEQRES 32 A 660 LYS VAL HIS PRO ARG TYR ASP LEU ASP GLY ASP ALA SER SEQRES 33 A 660 MET ALA LYS ALA ILE THR GLY VAL VAL CYS TYR ALA CYS SEQRES 34 A 660 ARG ILE ALA SER THR LEU LEU LEU TYR GLN GLU LEU MET SEQRES 35 A 660 ARG LYS GLY ILE ARG TRP LEU ILE GLU LEU ILE LYS ASP SEQRES 36 A 660 ASP TYR ASN GLU THR VAL HIS LYS LYS THR GLU VAL VAL SEQRES 37 A 660 ILE THR LEU ASP PHE CYS ILE ARG ASN ILE GLU LYS THR SEQRES 38 A 660 VAL LYS VAL TYR GLU LYS LEU MET LYS ILE ASN LEU GLU SEQRES 39 A 660 ALA ALA GLU LEU GLY GLU ILE SER ASP ILE HIS THR LYS SEQRES 40 A 660 LEU LEU ARG LEU SER SER SER GLN GLY THR ILE GLU THR SEQRES 41 A 660 SER LEU GLN ASP ILE ASP SER ARG LEU SER PRO GLY GLY SEQRES 42 A 660 SER LEU ALA ASP ALA TRP ALA HIS GLN GLU GLY THR HIS SEQRES 43 A 660 PRO LYS ASP ARG ASN VAL GLU LYS LEU GLN VAL LEU LEU SEQRES 44 A 660 ASN CYS MET THR GLU ILE TYR TYR GLN PHE LYS LYS ASP SEQRES 45 A 660 LYS ALA GLU ARG ARG LEU ALA TYR ASN GLU GLU GLN ILE SEQRES 46 A 660 HIS LYS PHE ASP LYS GLN LYS LEU TYR TYR HIS ALA THR SEQRES 47 A 660 LYS ALA MET THR HIS PHE THR ASP GLU CYS VAL LYS LYS SEQRES 48 A 660 TYR GLU ALA PHE LEU ASN LYS SER GLU GLU TRP ILE ARG SEQRES 49 A 660 LYS MET LEU HIS LEU ARG LYS GLN LEU LEU SER LEU THR SEQRES 50 A 660 ASN GLN CYS PHE ASP ILE GLU GLU GLU VAL SER LYS TYR SEQRES 51 A 660 GLN GLU TYR THR ASN GLU LEU GLN GLU THR HET F8P A 801 27 HETNAM F8P 2-AMINO-7-(4,4-DIFLUOROCYCLOHEXYL)-5-OXO-5H- HETNAM 2 F8P [1]BENZOPYRANO[2,3-B]PYRIDINE-3-CARBOXYLIC ACID HETSYN F8P 7-(4,4-DIFLUOROCYCLOHEXYL) ANALOG OF AMLEXANOX FORMUL 2 F8P C19 H16 F2 N2 O4 HELIX 1 AA1 GLN A 52 PHE A 56 1 5 HELIX 2 AA2 PHE A 56 LYS A 61 1 6 HELIX 3 AA3 SER A 93 GLU A 99 1 7 HELIX 4 AA4 GLU A 100 ALA A 104 5 5 HELIX 5 AA5 PRO A 108 GLY A 130 1 23 HELIX 6 AA6 HIS A 181 GLU A 186 1 6 HELIX 7 AA7 LEU A 204 GLY A 217 1 14 HELIX 8 AA8 ASN A 230 GLY A 240 1 11 HELIX 9 AA9 SER A 270 ASN A 283 1 14 HELIX 10 AB1 TRP A 293 HIS A 307 1 15 HELIX 11 AB2 THR A 331 LYS A 344 1 14 HELIX 12 AB3 ILE A 346 GLN A 350 5 5 HELIX 13 AB4 LEU A 366 PHE A 370 5 5 HELIX 14 AB5 ASP A 407 VAL A 479 1 73 HELIX 15 AB6 LEU A 495 LEU A 526 1 32 HELIX 16 AB7 TRP A 536 GLU A 540 5 5 HELIX 17 AB8 ARG A 547 GLU A 572 1 26 HELIX 18 AB9 ALA A 576 ASP A 603 1 28 HELIX 19 AC1 GLU A 604 VAL A 644 1 41 HELIX 20 AC2 VAL A 644 GLU A 649 1 6 SHEET 1 AA1 6 MET A 1 SER A 3 0 SHEET 2 AA1 6 HIS A 7 GLN A 17 -1 O TRP A 9 N GLN A 2 SHEET 3 AA1 6 ALA A 21 HIS A 28 -1 O ARG A 25 N ASP A 13 SHEET 4 AA1 6 LEU A 34 PHE A 40 -1 O PHE A 35 N GLY A 26 SHEET 5 AA1 6 LYS A 82 MET A 86 -1 O MET A 86 N ALA A 36 SHEET 6 AA1 6 LEU A 70 GLU A 75 -1 N GLU A 74 O VAL A 83 SHEET 1 AA2 2 ILE A 141 ILE A 145 0 SHEET 2 AA2 2 SER A 151 LEU A 155 -1 O VAL A 152 N VAL A 144 SHEET 1 AA3 3 PHE A 221 ARG A 222 0 SHEET 2 AA3 3 SER A 247 VAL A 249 1 O GLY A 248 N ARG A 222 SHEET 3 AA3 3 ASP A 258 SER A 260 -1 O ASP A 258 N VAL A 249 SHEET 1 AA4 5 THR A 320 HIS A 327 0 SHEET 2 AA4 5 ARG A 308 SER A 315 -1 N SER A 315 O THR A 320 SHEET 3 AA4 5 ILE A 379 VAL A 382 1 O ILE A 379 N HIS A 312 SHEET 4 AA4 5 GLU A 351 TYR A 354 -1 N GLU A 351 O VAL A 382 SHEET 5 AA4 5 ARG A 357 LEU A 359 -1 O ARG A 357 N TYR A 354 SITE 1 AC1 9 LEU A 15 ALA A 36 MET A 86 GLU A 87 SITE 2 AC1 9 PHE A 88 CYS A 89 PRO A 90 MET A 142 SITE 3 AC1 9 THR A 156 CRYST1 134.604 134.604 84.505 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007429 0.004289 0.000000 0.00000 SCALE2 0.000000 0.008579 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011834 0.00000