HEADER IMMUNE SYSTEM 15-MAR-18 6CQJ TITLE CRYSTAL STRUCTURE OF DR1 PRESENTING THE RQ13 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR ALPHA CHAIN; COMPND 3 CHAIN: A, D, G; COMPND 4 SYNONYM: MHC CLASS II ANTIGEN DRA; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DRB1-1 BETA CHAIN; COMPND 8 CHAIN: B, E, H; COMPND 9 SYNONYM: MHC CLASS II ANTIGEN DRB1*1,DR1; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: PEPTIDE FROM CAPSID PROTEIN P24; COMPND 13 CHAIN: C, F, I; COMPND 14 SYNONYM: PR55GAG; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HLA-DRA, HLA-DRA1; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: HLA-DRB1; SOURCE 13 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: HIV-1 M:B_HXB2R; SOURCE 18 ORGANISM_TAXID: 11706 KEYWDS IMMUNE RECEPTOR, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR C.FARENC,S.GRAS,J.ROSSJOHN REVDAT 4 04-OCT-23 6CQJ 1 HETSYN REVDAT 3 29-JUL-20 6CQJ 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 27-JUN-18 6CQJ 1 TITLE JRNL REVDAT 1 06-JUN-18 6CQJ 0 JRNL AUTH M.GALPERIN,C.FARENC,M.MUKHOPADHYAY,D.JAYASINGHE,A.DECROOS, JRNL AUTH 2 D.BENATI,L.L.TAN,L.CIACCHI,H.H.REID,J.ROSSJOHN, JRNL AUTH 3 L.A.CHAKRABARTI,S.GRAS JRNL TITL CD4+T CELL-MEDIATED HLA CLASS II CROSS-RESTRICTION IN HIV JRNL TITL 2 CONTROLLERS. JRNL REF SCI IMMUNOL V. 3 2018 JRNL REFN ESSN 2470-9468 JRNL PMID 29884618 JRNL DOI 10.1126/SCIIMMUNOL.AAT0687 REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 40739 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.740 REMARK 3 FREE R VALUE TEST SET COUNT : 1929 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.000 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.82 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.95 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2983 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2350 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2839 REMARK 3 BIN R VALUE (WORKING SET) : 0.2320 REMARK 3 BIN FREE R VALUE : 0.3020 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.83 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 144 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9257 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 100 REMARK 3 SOLVENT ATOMS : 268 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 77.15 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -23.95870 REMARK 3 B22 (A**2) : 16.84000 REMARK 3 B33 (A**2) : 7.11870 REMARK 3 B12 (A**2) : -6.08680 REMARK 3 B13 (A**2) : -2.14780 REMARK 3 B23 (A**2) : -6.09730 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.360 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.859 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.322 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 1.152 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.334 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.887 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.866 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 9630 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 13089 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 3325 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 264 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 1378 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 9630 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 1209 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 10198 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.17 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.12 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 21.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6CQJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1000233190. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.984 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40739 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 47.960 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 2.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.86 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 4MDO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HEPES PH 7.5, NA ACETATE, PEG 4000, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 1 REMARK 465 LYS A 2 REMARK 465 THR B 106 REMARK 465 GLN B 107 REMARK 465 PRO B 108 REMARK 465 LEU B 109 REMARK 465 GLN B 110 REMARK 465 HIS B 111 REMARK 465 HIS B 112 REMARK 465 ASP E 2 REMARK 465 THR E 3 REMARK 465 THR E 106 REMARK 465 GLN E 107 REMARK 465 PRO E 108 REMARK 465 LEU E 109 REMARK 465 GLN E 110 REMARK 465 HIS E 111 REMARK 465 HIS E 112 REMARK 465 ILE G 1 REMARK 465 LYS G 2 REMARK 465 THR H 106 REMARK 465 GLN H 107 REMARK 465 PRO H 108 REMARK 465 LEU H 109 REMARK 465 GLN H 110 REMARK 465 HIS H 111 REMARK 465 HIS H 112 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 4 -60.61 -123.11 REMARK 500 ASN B 33 -93.60 64.29 REMARK 500 THR B 90 -82.74 -114.46 REMARK 500 TRP B 153 33.54 72.81 REMARK 500 GLU D 4 -61.43 -125.06 REMARK 500 ASN E 33 -93.70 63.87 REMARK 500 THR E 90 -81.02 -114.36 REMARK 500 SER E 126 94.93 -66.97 REMARK 500 TRP E 153 31.96 74.46 REMARK 500 GLU G 4 -60.10 -122.17 REMARK 500 ASN H 33 -94.30 64.71 REMARK 500 THR H 90 -80.65 -113.82 REMARK 500 TRP H 153 32.73 72.47 REMARK 500 GLU H 169 138.79 -32.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 630 REMARK 630 MOLECULE TYPE: OLIGOSACCHARIDE INHIBITOR REMARK 630 MOLECULE NAME: 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE REMARK 630 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 630 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 630 REMARK 630 M RES C SSSEQI REMARK 630 NAG A 202 REMARK 630 NAG D 202 REMARK 630 SOURCE: NULL REMARK 630 TAXONOMY: NULL REMARK 630 SUBCOMP: NULL REMARK 630 DETAILS: OLIGOSACCHARIDE DBREF 6CQJ A 1 182 UNP P01903 DRA_HUMAN 26 207 DBREF 6CQJ B 2 190 UNP P04229 2B11_HUMAN 31 219 DBREF 6CQJ C 299 311 UNP P04591 GAG_HV1H2 299 311 DBREF 6CQJ D 1 182 UNP P01903 DRA_HUMAN 26 207 DBREF 6CQJ E 2 190 UNP P04229 2B11_HUMAN 31 219 DBREF 6CQJ F 299 311 UNP P04591 GAG_HV1H2 299 311 DBREF 6CQJ G 1 182 UNP P01903 DRA_HUMAN 26 207 DBREF 6CQJ H 2 190 UNP P04229 2B11_HUMAN 31 219 DBREF 6CQJ I 299 311 UNP P04591 GAG_HV1H2 299 311 SEQADV 6CQJ THR A 182 UNP P01903 ALA 207 CONFLICT SEQADV 6CQJ THR D 182 UNP P01903 ALA 207 CONFLICT SEQADV 6CQJ THR G 182 UNP P01903 ALA 207 CONFLICT SEQRES 1 A 182 ILE LYS GLU GLU HIS VAL ILE ILE GLN ALA GLU PHE TYR SEQRES 2 A 182 LEU ASN PRO ASP GLN SER GLY GLU PHE MET PHE ASP PHE SEQRES 3 A 182 ASP GLY ASP GLU ILE PHE HIS VAL ASP MET ALA LYS LYS SEQRES 4 A 182 GLU THR VAL TRP ARG LEU GLU GLU PHE GLY ARG PHE ALA SEQRES 5 A 182 SER PHE GLU ALA GLN GLY ALA LEU ALA ASN ILE ALA VAL SEQRES 6 A 182 ASP LYS ALA ASN LEU GLU ILE MET THR LYS ARG SER ASN SEQRES 7 A 182 TYR THR PRO ILE THR ASN VAL PRO PRO GLU VAL THR VAL SEQRES 8 A 182 LEU THR ASN SER PRO VAL GLU LEU ARG GLU PRO ASN VAL SEQRES 9 A 182 LEU ILE CYS PHE ILE ASP LYS PHE THR PRO PRO VAL VAL SEQRES 10 A 182 ASN VAL THR TRP LEU ARG ASN GLY LYS PRO VAL THR THR SEQRES 11 A 182 GLY VAL SER GLU THR VAL PHE LEU PRO ARG GLU ASP HIS SEQRES 12 A 182 LEU PHE ARG LYS PHE HIS TYR LEU PRO PHE LEU PRO SER SEQRES 13 A 182 THR GLU ASP VAL TYR ASP CYS ARG VAL GLU HIS TRP GLY SEQRES 14 A 182 LEU ASP GLU PRO LEU LEU LYS HIS TRP GLU PHE ASP THR SEQRES 1 B 189 ASP THR ARG PRO ARG PHE LEU TRP GLN LEU LYS PHE GLU SEQRES 2 B 189 CYS HIS PHE PHE ASN GLY THR GLU ARG VAL ARG LEU LEU SEQRES 3 B 189 GLU ARG CYS ILE TYR ASN GLN GLU GLU SER VAL ARG PHE SEQRES 4 B 189 ASP SER ASP VAL GLY GLU TYR ARG ALA VAL THR GLU LEU SEQRES 5 B 189 GLY ARG PRO ASP ALA GLU TYR TRP ASN SER GLN LYS ASP SEQRES 6 B 189 LEU LEU GLU GLN ARG ARG ALA ALA VAL ASP THR TYR CYS SEQRES 7 B 189 ARG HIS ASN TYR GLY VAL GLY GLU SER PHE THR VAL GLN SEQRES 8 B 189 ARG ARG VAL GLU PRO LYS VAL THR VAL TYR PRO SER LYS SEQRES 9 B 189 THR GLN PRO LEU GLN HIS HIS ASN LEU LEU VAL CYS SER SEQRES 10 B 189 VAL SER GLY PHE TYR PRO GLY SER ILE GLU VAL ARG TRP SEQRES 11 B 189 PHE ARG ASN GLY GLN GLU GLU LYS ALA GLY VAL VAL SER SEQRES 12 B 189 THR GLY LEU ILE GLN ASN GLY ASP TRP THR PHE GLN THR SEQRES 13 B 189 LEU VAL MET LEU GLU THR VAL PRO ARG SER GLY GLU VAL SEQRES 14 B 189 TYR THR CYS GLN VAL GLU HIS PRO SER VAL THR SER PRO SEQRES 15 B 189 LEU THR VAL GLU TRP ARG ALA SEQRES 1 C 13 ARG PHE TYR LYS THR LEU ARG ALA GLU GLN ALA SER GLN SEQRES 1 D 182 ILE LYS GLU GLU HIS VAL ILE ILE GLN ALA GLU PHE TYR SEQRES 2 D 182 LEU ASN PRO ASP GLN SER GLY GLU PHE MET PHE ASP PHE SEQRES 3 D 182 ASP GLY ASP GLU ILE PHE HIS VAL ASP MET ALA LYS LYS SEQRES 4 D 182 GLU THR VAL TRP ARG LEU GLU GLU PHE GLY ARG PHE ALA SEQRES 5 D 182 SER PHE GLU ALA GLN GLY ALA LEU ALA ASN ILE ALA VAL SEQRES 6 D 182 ASP LYS ALA ASN LEU GLU ILE MET THR LYS ARG SER ASN SEQRES 7 D 182 TYR THR PRO ILE THR ASN VAL PRO PRO GLU VAL THR VAL SEQRES 8 D 182 LEU THR ASN SER PRO VAL GLU LEU ARG GLU PRO ASN VAL SEQRES 9 D 182 LEU ILE CYS PHE ILE ASP LYS PHE THR PRO PRO VAL VAL SEQRES 10 D 182 ASN VAL THR TRP LEU ARG ASN GLY LYS PRO VAL THR THR SEQRES 11 D 182 GLY VAL SER GLU THR VAL PHE LEU PRO ARG GLU ASP HIS SEQRES 12 D 182 LEU PHE ARG LYS PHE HIS TYR LEU PRO PHE LEU PRO SER SEQRES 13 D 182 THR GLU ASP VAL TYR ASP CYS ARG VAL GLU HIS TRP GLY SEQRES 14 D 182 LEU ASP GLU PRO LEU LEU LYS HIS TRP GLU PHE ASP THR SEQRES 1 E 189 ASP THR ARG PRO ARG PHE LEU TRP GLN LEU LYS PHE GLU SEQRES 2 E 189 CYS HIS PHE PHE ASN GLY THR GLU ARG VAL ARG LEU LEU SEQRES 3 E 189 GLU ARG CYS ILE TYR ASN GLN GLU GLU SER VAL ARG PHE SEQRES 4 E 189 ASP SER ASP VAL GLY GLU TYR ARG ALA VAL THR GLU LEU SEQRES 5 E 189 GLY ARG PRO ASP ALA GLU TYR TRP ASN SER GLN LYS ASP SEQRES 6 E 189 LEU LEU GLU GLN ARG ARG ALA ALA VAL ASP THR TYR CYS SEQRES 7 E 189 ARG HIS ASN TYR GLY VAL GLY GLU SER PHE THR VAL GLN SEQRES 8 E 189 ARG ARG VAL GLU PRO LYS VAL THR VAL TYR PRO SER LYS SEQRES 9 E 189 THR GLN PRO LEU GLN HIS HIS ASN LEU LEU VAL CYS SER SEQRES 10 E 189 VAL SER GLY PHE TYR PRO GLY SER ILE GLU VAL ARG TRP SEQRES 11 E 189 PHE ARG ASN GLY GLN GLU GLU LYS ALA GLY VAL VAL SER SEQRES 12 E 189 THR GLY LEU ILE GLN ASN GLY ASP TRP THR PHE GLN THR SEQRES 13 E 189 LEU VAL MET LEU GLU THR VAL PRO ARG SER GLY GLU VAL SEQRES 14 E 189 TYR THR CYS GLN VAL GLU HIS PRO SER VAL THR SER PRO SEQRES 15 E 189 LEU THR VAL GLU TRP ARG ALA SEQRES 1 F 13 ARG PHE TYR LYS THR LEU ARG ALA GLU GLN ALA SER GLN SEQRES 1 G 182 ILE LYS GLU GLU HIS VAL ILE ILE GLN ALA GLU PHE TYR SEQRES 2 G 182 LEU ASN PRO ASP GLN SER GLY GLU PHE MET PHE ASP PHE SEQRES 3 G 182 ASP GLY ASP GLU ILE PHE HIS VAL ASP MET ALA LYS LYS SEQRES 4 G 182 GLU THR VAL TRP ARG LEU GLU GLU PHE GLY ARG PHE ALA SEQRES 5 G 182 SER PHE GLU ALA GLN GLY ALA LEU ALA ASN ILE ALA VAL SEQRES 6 G 182 ASP LYS ALA ASN LEU GLU ILE MET THR LYS ARG SER ASN SEQRES 7 G 182 TYR THR PRO ILE THR ASN VAL PRO PRO GLU VAL THR VAL SEQRES 8 G 182 LEU THR ASN SER PRO VAL GLU LEU ARG GLU PRO ASN VAL SEQRES 9 G 182 LEU ILE CYS PHE ILE ASP LYS PHE THR PRO PRO VAL VAL SEQRES 10 G 182 ASN VAL THR TRP LEU ARG ASN GLY LYS PRO VAL THR THR SEQRES 11 G 182 GLY VAL SER GLU THR VAL PHE LEU PRO ARG GLU ASP HIS SEQRES 12 G 182 LEU PHE ARG LYS PHE HIS TYR LEU PRO PHE LEU PRO SER SEQRES 13 G 182 THR GLU ASP VAL TYR ASP CYS ARG VAL GLU HIS TRP GLY SEQRES 14 G 182 LEU ASP GLU PRO LEU LEU LYS HIS TRP GLU PHE ASP THR SEQRES 1 H 189 ASP THR ARG PRO ARG PHE LEU TRP GLN LEU LYS PHE GLU SEQRES 2 H 189 CYS HIS PHE PHE ASN GLY THR GLU ARG VAL ARG LEU LEU SEQRES 3 H 189 GLU ARG CYS ILE TYR ASN GLN GLU GLU SER VAL ARG PHE SEQRES 4 H 189 ASP SER ASP VAL GLY GLU TYR ARG ALA VAL THR GLU LEU SEQRES 5 H 189 GLY ARG PRO ASP ALA GLU TYR TRP ASN SER GLN LYS ASP SEQRES 6 H 189 LEU LEU GLU GLN ARG ARG ALA ALA VAL ASP THR TYR CYS SEQRES 7 H 189 ARG HIS ASN TYR GLY VAL GLY GLU SER PHE THR VAL GLN SEQRES 8 H 189 ARG ARG VAL GLU PRO LYS VAL THR VAL TYR PRO SER LYS SEQRES 9 H 189 THR GLN PRO LEU GLN HIS HIS ASN LEU LEU VAL CYS SER SEQRES 10 H 189 VAL SER GLY PHE TYR PRO GLY SER ILE GLU VAL ARG TRP SEQRES 11 H 189 PHE ARG ASN GLY GLN GLU GLU LYS ALA GLY VAL VAL SER SEQRES 12 H 189 THR GLY LEU ILE GLN ASN GLY ASP TRP THR PHE GLN THR SEQRES 13 H 189 LEU VAL MET LEU GLU THR VAL PRO ARG SER GLY GLU VAL SEQRES 14 H 189 TYR THR CYS GLN VAL GLU HIS PRO SER VAL THR SER PRO SEQRES 15 H 189 LEU THR VAL GLU TRP ARG ALA SEQRES 1 I 13 ARG PHE TYR LYS THR LEU ARG ALA GLU GLN ALA SER GLN HET NAG J 1 14 HET NAG J 2 14 HET NAG J 3 14 HET PEG A 201 7 HET NAG A 202 14 HET PEG B 201 7 HET NA D 201 1 HET NAG D 202 14 HET PEG E 201 7 HET PEG G 201 7 HET NA G 202 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM NA SODIUM ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 10 NAG 5(C8 H15 N O6) FORMUL 11 PEG 4(C4 H10 O3) FORMUL 14 NA 2(NA 1+) FORMUL 19 HOH *268(H2 O) HELIX 1 AA1 LEU A 45 ALA A 52 1 8 HELIX 2 AA2 GLU A 55 SER A 77 1 23 HELIX 3 AA3 THR B 51 LEU B 53 5 3 HELIX 4 AA4 GLY B 54 SER B 63 1 10 HELIX 5 AA5 GLN B 64 ALA B 73 1 10 HELIX 6 AA6 ALA B 73 TYR B 78 1 6 HELIX 7 AA7 TYR B 78 GLU B 87 1 10 HELIX 8 AA8 LEU D 45 ALA D 52 1 8 HELIX 9 AA9 GLU D 55 SER D 77 1 23 HELIX 10 AB1 THR E 51 LEU E 53 5 3 HELIX 11 AB2 GLY E 54 SER E 63 1 10 HELIX 12 AB3 GLN E 64 TYR E 78 1 15 HELIX 13 AB4 TYR E 78 GLU E 87 1 10 HELIX 14 AB5 LEU G 45 ALA G 52 1 8 HELIX 15 AB6 GLU G 55 SER G 77 1 23 HELIX 16 AB7 THR H 51 LEU H 53 5 3 HELIX 17 AB8 GLY H 54 SER H 63 1 10 HELIX 18 AB9 GLN H 64 ALA H 73 1 10 HELIX 19 AC1 ALA H 73 TYR H 78 1 6 HELIX 20 AC2 TYR H 78 GLY H 86 1 9 SHEET 1 AA1 8 GLU A 40 TRP A 43 0 SHEET 2 AA1 8 ASP A 29 ASP A 35 -1 N HIS A 33 O VAL A 42 SHEET 3 AA1 8 SER A 19 PHE A 26 -1 N PHE A 24 O ILE A 31 SHEET 4 AA1 8 HIS A 5 ASN A 15 -1 N ILE A 8 O ASP A 25 SHEET 5 AA1 8 PHE B 7 PHE B 18 -1 O PHE B 17 N HIS A 5 SHEET 6 AA1 8 ARG B 23 TYR B 32 -1 O ARG B 25 N HIS B 16 SHEET 7 AA1 8 GLU B 35 ASP B 41 -1 O PHE B 40 N GLU B 28 SHEET 8 AA1 8 TYR B 47 ALA B 49 -1 O ARG B 48 N ARG B 39 SHEET 1 AA2 4 GLU A 88 THR A 93 0 SHEET 2 AA2 4 ASN A 103 PHE A 112 -1 O PHE A 108 N THR A 90 SHEET 3 AA2 4 PHE A 145 PHE A 153 -1 O PHE A 145 N PHE A 112 SHEET 4 AA2 4 SER A 133 GLU A 134 -1 N SER A 133 O TYR A 150 SHEET 1 AA3 4 GLU A 88 THR A 93 0 SHEET 2 AA3 4 ASN A 103 PHE A 112 -1 O PHE A 108 N THR A 90 SHEET 3 AA3 4 PHE A 145 PHE A 153 -1 O PHE A 145 N PHE A 112 SHEET 4 AA3 4 LEU A 138 PRO A 139 -1 N LEU A 138 O ARG A 146 SHEET 1 AA4 4 LYS A 126 PRO A 127 0 SHEET 2 AA4 4 ASN A 118 ARG A 123 -1 N ARG A 123 O LYS A 126 SHEET 3 AA4 4 VAL A 160 GLU A 166 -1 O ARG A 164 N THR A 120 SHEET 4 AA4 4 LEU A 174 GLU A 179 -1 O TRP A 178 N TYR A 161 SHEET 1 AA5 4 LYS B 98 PRO B 103 0 SHEET 2 AA5 4 LEU B 114 PHE B 122 -1 O SER B 118 N THR B 100 SHEET 3 AA5 4 PHE B 155 GLU B 162 -1 O LEU B 161 N LEU B 115 SHEET 4 AA5 4 VAL B 142 SER B 144 -1 N VAL B 143 O MET B 160 SHEET 1 AA6 4 LYS B 98 PRO B 103 0 SHEET 2 AA6 4 LEU B 114 PHE B 122 -1 O SER B 118 N THR B 100 SHEET 3 AA6 4 PHE B 155 GLU B 162 -1 O LEU B 161 N LEU B 115 SHEET 4 AA6 4 ILE B 148 GLN B 149 -1 N ILE B 148 O GLN B 156 SHEET 1 AA7 4 GLN B 136 GLU B 137 0 SHEET 2 AA7 4 GLU B 128 ARG B 133 -1 N ARG B 133 O GLN B 136 SHEET 3 AA7 4 VAL B 170 GLU B 176 -1 O GLN B 174 N ARG B 130 SHEET 4 AA7 4 LEU B 184 ARG B 189 -1 O TRP B 188 N TYR B 171 SHEET 1 AA8 8 GLU D 40 TRP D 43 0 SHEET 2 AA8 8 ASP D 29 ASP D 35 -1 N HIS D 33 O VAL D 42 SHEET 3 AA8 8 SER D 19 PHE D 26 -1 N PHE D 24 O ILE D 31 SHEET 4 AA8 8 HIS D 5 ASN D 15 -1 N ALA D 10 O MET D 23 SHEET 5 AA8 8 PHE E 7 PHE E 18 -1 O CYS E 15 N ILE D 7 SHEET 6 AA8 8 ARG E 23 TYR E 32 -1 O ARG E 25 N HIS E 16 SHEET 7 AA8 8 GLU E 35 ASP E 41 -1 O PHE E 40 N GLU E 28 SHEET 8 AA8 8 TYR E 47 ALA E 49 -1 O ARG E 48 N ARG E 39 SHEET 1 AA9 2 SER D 53 PHE D 54 0 SHEET 2 AA9 2 PHE F 300 TYR F 301 1 O TYR F 301 N SER D 53 SHEET 1 AB1 4 GLU D 88 THR D 93 0 SHEET 2 AB1 4 ASN D 103 PHE D 112 -1 O PHE D 108 N THR D 90 SHEET 3 AB1 4 PHE D 145 PHE D 153 -1 O PHE D 153 N ASN D 103 SHEET 4 AB1 4 SER D 133 GLU D 134 -1 N SER D 133 O TYR D 150 SHEET 1 AB2 4 GLU D 88 THR D 93 0 SHEET 2 AB2 4 ASN D 103 PHE D 112 -1 O PHE D 108 N THR D 90 SHEET 3 AB2 4 PHE D 145 PHE D 153 -1 O PHE D 153 N ASN D 103 SHEET 4 AB2 4 LEU D 138 PRO D 139 -1 N LEU D 138 O ARG D 146 SHEET 1 AB3 4 LYS D 126 PRO D 127 0 SHEET 2 AB3 4 ASN D 118 ARG D 123 -1 N ARG D 123 O LYS D 126 SHEET 3 AB3 4 VAL D 160 GLU D 166 -1 O ARG D 164 N THR D 120 SHEET 4 AB3 4 LEU D 174 GLU D 179 -1 O TRP D 178 N TYR D 161 SHEET 1 AB4 4 LYS E 98 SER E 104 0 SHEET 2 AB4 4 LEU E 114 PHE E 122 -1 O LEU E 114 N SER E 104 SHEET 3 AB4 4 PHE E 155 GLU E 162 -1 O LEU E 161 N LEU E 115 SHEET 4 AB4 4 VAL E 142 SER E 144 -1 N VAL E 143 O MET E 160 SHEET 1 AB5 4 LYS E 98 SER E 104 0 SHEET 2 AB5 4 LEU E 114 PHE E 122 -1 O LEU E 114 N SER E 104 SHEET 3 AB5 4 PHE E 155 GLU E 162 -1 O LEU E 161 N LEU E 115 SHEET 4 AB5 4 ILE E 148 GLN E 149 -1 N ILE E 148 O GLN E 156 SHEET 1 AB6 4 GLN E 136 GLU E 138 0 SHEET 2 AB6 4 GLU E 128 ARG E 133 -1 N ARG E 133 O GLN E 136 SHEET 3 AB6 4 VAL E 170 GLU E 176 -1 O GLN E 174 N ARG E 130 SHEET 4 AB6 4 LEU E 184 ARG E 189 -1 O TRP E 188 N TYR E 171 SHEET 1 AB7 8 GLU G 40 TRP G 43 0 SHEET 2 AB7 8 ASP G 29 ASP G 35 -1 N HIS G 33 O VAL G 42 SHEET 3 AB7 8 SER G 19 PHE G 26 -1 N PHE G 24 O ILE G 31 SHEET 4 AB7 8 HIS G 5 ASN G 15 -1 N ILE G 8 O ASP G 25 SHEET 5 AB7 8 PHE H 7 PHE H 18 -1 O PHE H 17 N HIS G 5 SHEET 6 AB7 8 ARG H 23 TYR H 32 -1 O ARG H 25 N HIS H 16 SHEET 7 AB7 8 GLU H 35 ASP H 41 -1 O PHE H 40 N GLU H 28 SHEET 8 AB7 8 TYR H 47 ALA H 49 -1 O ARG H 48 N ARG H 39 SHEET 1 AB8 4 GLU G 88 THR G 93 0 SHEET 2 AB8 4 ASN G 103 PHE G 112 -1 O ILE G 106 N LEU G 92 SHEET 3 AB8 4 PHE G 145 PHE G 153 -1 O LEU G 151 N LEU G 105 SHEET 4 AB8 4 SER G 133 GLU G 134 -1 N SER G 133 O TYR G 150 SHEET 1 AB9 4 GLU G 88 THR G 93 0 SHEET 2 AB9 4 ASN G 103 PHE G 112 -1 O ILE G 106 N LEU G 92 SHEET 3 AB9 4 PHE G 145 PHE G 153 -1 O LEU G 151 N LEU G 105 SHEET 4 AB9 4 LEU G 138 PRO G 139 -1 N LEU G 138 O ARG G 146 SHEET 1 AC1 4 LYS G 126 PRO G 127 0 SHEET 2 AC1 4 ASN G 118 ARG G 123 -1 N ARG G 123 O LYS G 126 SHEET 3 AC1 4 VAL G 160 GLU G 166 -1 O ARG G 164 N THR G 120 SHEET 4 AC1 4 LEU G 174 GLU G 179 -1 O TRP G 178 N TYR G 161 SHEET 1 AC2 4 LYS H 98 SER H 104 0 SHEET 2 AC2 4 LEU H 114 PHE H 122 -1 O SER H 118 N THR H 100 SHEET 3 AC2 4 PHE H 155 GLU H 162 -1 O THR H 157 N VAL H 119 SHEET 4 AC2 4 VAL H 142 SER H 144 -1 N VAL H 143 O MET H 160 SHEET 1 AC3 4 LYS H 98 SER H 104 0 SHEET 2 AC3 4 LEU H 114 PHE H 122 -1 O SER H 118 N THR H 100 SHEET 3 AC3 4 PHE H 155 GLU H 162 -1 O THR H 157 N VAL H 119 SHEET 4 AC3 4 ILE H 148 GLN H 149 -1 N ILE H 148 O GLN H 156 SHEET 1 AC4 4 GLN H 136 GLU H 137 0 SHEET 2 AC4 4 GLU H 128 ARG H 133 -1 N ARG H 133 O GLN H 136 SHEET 3 AC4 4 VAL H 170 GLU H 176 -1 O GLN H 174 N ARG H 130 SHEET 4 AC4 4 LEU H 184 ARG H 189 -1 O TRP H 188 N TYR H 171 SSBOND 1 CYS A 107 CYS A 163 1555 1555 2.02 SSBOND 2 CYS B 15 CYS B 79 1555 1555 2.07 SSBOND 3 CYS B 117 CYS B 173 1555 1555 2.02 SSBOND 4 CYS D 107 CYS D 163 1555 1555 2.04 SSBOND 5 CYS E 15 CYS E 79 1555 1555 2.07 SSBOND 6 CYS E 117 CYS E 173 1555 1555 2.02 SSBOND 7 CYS G 107 CYS G 163 1555 1555 2.04 SSBOND 8 CYS H 15 CYS H 79 1555 1555 2.07 SSBOND 9 CYS H 117 CYS H 173 1555 1555 2.02 LINK ND2 ASN A 118 C1 NAG A 202 1555 1555 1.44 LINK ND2 ASN D 118 C1 NAG D 202 1555 1555 1.44 LINK ND2 ASN G 118 C1 NAG J 1 1555 1555 1.43 LINK O4 NAG J 1 C1 NAG J 2 1555 1555 1.45 LINK O4 NAG J 2 C1 NAG J 3 1555 1555 1.45 CISPEP 1 ASN A 15 PRO A 16 0 3.67 CISPEP 2 THR A 113 PRO A 114 0 1.25 CISPEP 3 TYR B 123 PRO B 124 0 1.12 CISPEP 4 ASN D 15 PRO D 16 0 3.17 CISPEP 5 THR D 113 PRO D 114 0 1.53 CISPEP 6 TYR E 123 PRO E 124 0 -1.87 CISPEP 7 ASN G 15 PRO G 16 0 2.75 CISPEP 8 THR G 113 PRO G 114 0 1.01 CISPEP 9 TYR H 123 PRO H 124 0 1.73 CRYST1 68.684 82.017 83.050 61.56 88.20 86.47 P 1 3 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014559 -0.000898 -0.000035 0.00000 SCALE2 0.000000 0.012216 -0.006602 0.00000 SCALE3 0.000000 0.000000 0.013694 0.00000