HEADER METAL TRANSPORT 22-MAR-18 6CTC TITLE CRYSTAL STRUCTURE OF HUMAN TRANSFERRIN BOUND TO TRIFERIC FPC IRON TITLE 2 PYROPHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SEROTRANSFERRIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TRANSFERRIN,BETA-1 METAL-BINDING GLOBULIN,SIDEROPHILIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TF, PRO1400; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS IRON, PYROPHOSPHATE, TRANSFERRIN, TRIFERIC IRON, FPC, TRANSFUSION, KEYWDS 2 BLOOD, PLASMA, METAL TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR T.E.EDWARDS,R.PRATT REVDAT 3 04-OCT-23 6CTC 1 JRNL REVDAT 2 28-NOV-18 6CTC 1 JRNL REVDAT 1 24-OCT-18 6CTC 0 JRNL AUTH R.PRATT,G.J.HANDELMAN,T.E.EDWARDS,A.GUPTA JRNL TITL FERRIC PYROPHOSPHATE CITRATE: INTERACTIONS WITH TRANSFERRIN. JRNL REF BIOMETALS V. 31 1081 2018 JRNL REFN ESSN 1572-8773 JRNL PMID 30311019 JRNL DOI 10.1007/S10534-018-0142-2 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.38 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 23438 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.140 REMARK 3 FREE R VALUE TEST SET COUNT : 1204 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.3790 - 5.4023 0.99 2595 153 0.1617 0.2107 REMARK 3 2 5.4023 - 4.2906 1.00 2509 129 0.1445 0.1985 REMARK 3 3 4.2906 - 3.7490 1.00 2463 144 0.1602 0.2318 REMARK 3 4 3.7490 - 3.4065 1.00 2484 123 0.1764 0.2705 REMARK 3 5 3.4065 - 3.1625 1.00 2427 145 0.2031 0.3192 REMARK 3 6 3.1625 - 2.9762 1.00 2447 118 0.2351 0.3175 REMARK 3 7 2.9762 - 2.8272 1.00 2431 148 0.2348 0.3264 REMARK 3 8 2.8272 - 2.7042 1.00 2451 111 0.2422 0.3384 REMARK 3 9 2.7042 - 2.6001 1.00 2427 133 0.2677 0.3992 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.440 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.570 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 55.43 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 58.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 316 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.9767 11.2303 7.6382 REMARK 3 T TENSOR REMARK 3 T11: 0.4472 T22: 0.4382 REMARK 3 T33: 0.5158 T12: 0.0143 REMARK 3 T13: 0.0584 T23: 0.0094 REMARK 3 L TENSOR REMARK 3 L11: 1.5298 L22: 0.7341 REMARK 3 L33: 2.7836 L12: 0.2073 REMARK 3 L13: -1.2012 L23: 0.4172 REMARK 3 S TENSOR REMARK 3 S11: 0.0475 S12: -0.0554 S13: 0.1300 REMARK 3 S21: -0.1388 S22: 0.1230 S23: -0.2692 REMARK 3 S31: -0.0847 S32: 0.3856 S33: -0.0773 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 317 THROUGH 679 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.7953 -8.1786 -1.9652 REMARK 3 T TENSOR REMARK 3 T11: 0.4250 T22: 0.4502 REMARK 3 T33: 0.3641 T12: -0.0625 REMARK 3 T13: 0.0054 T23: 0.0527 REMARK 3 L TENSOR REMARK 3 L11: 1.9112 L22: 1.3780 REMARK 3 L33: 2.0055 L12: 0.5771 REMARK 3 L13: 1.3935 L23: 0.9973 REMARK 3 S TENSOR REMARK 3 S11: 0.2205 S12: -0.3052 S13: -0.1883 REMARK 3 S21: 0.1489 S22: -0.1309 S23: 0.0114 REMARK 3 S31: 0.2258 S32: -0.2555 S33: -0.0642 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6CTC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1000233356. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23450 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 34.376 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.038 REMARK 200 R MERGE (I) : 0.04500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 31.5500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.67 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.25 REMARK 200 R MERGE FOR SHELL (I) : 0.48400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4H0W REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: APO HUMAN TRANSFERRIN (PROSPEC PRO-325 REMARK 280 PURIFIED BY Q-SEPHAROSE) AT 56 MG/ML (0.76 MM) AGAINST MORPHEUS REMARK 280 SCREEN CONDITION D4 12.5% PEG 1000, 12.5% PEG3350, 12.5% MPD, REMARK 280 0.02 M EACH 1,6-HEXANEDIOL, 1-BUTANOL, RS-1,2-PROPANEDIOL, 2- REMARK 280 PROPANOL, 1,4-BUTANEDIOL, 1,3-PROPANEDIOL, 0.1 M MES/IMIDAZOLE REMARK 280 PH 6.5, CRYSTAL TRACKING ID 246352D4, UNIQUE PUCK ID SUV0-5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.18500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.21500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.08000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.21500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.18500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.08000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 1 REMARK 465 PRO A 2 REMARK 465 ALA A 334 REMARK 465 PRO A 335 REMARK 465 THR A 336 REMARK 465 ASP A 337 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 4 CG CD CE NZ REMARK 470 GLU A 13 CG CD OE1 OE2 REMARK 470 LYS A 27 CG CD CE NZ REMARK 470 LYS A 41 CG CD CE NZ REMARK 470 GLU A 56 CG CD OE1 OE2 REMARK 470 LYS A 88 CG CD CE NZ REMARK 470 GLU A 89 CG CD OE1 OE2 REMARK 470 LYS A 102 CG CD CE NZ REMARK 470 LYS A 144 CG CD CE NZ REMARK 470 LYS A 148 CG CD CE NZ REMARK 470 THR A 165 OG1 CG2 REMARK 470 GLN A 169 CG CD OE1 NE2 REMARK 470 LEU A 182 CG CD1 CD2 REMARK 470 LYS A 196 CG CD CE NZ REMARK 470 MET A 256 CG SD CE REMARK 470 LEU A 262 CG CD1 CD2 REMARK 470 GLU A 272 CG CD OE1 OE2 REMARK 470 LYS A 276 CG CD CE NZ REMARK 470 LYS A 280 CG CD CE NZ REMARK 470 GLU A 281 CG CD OE1 OE2 REMARK 470 LYS A 291 CG CD CE NZ REMARK 470 PRO A 332 CG CD REMARK 470 GLU A 333 CG CD OE1 OE2 REMARK 470 GLU A 338 CG CD OE1 OE2 REMARK 470 LYS A 340 CG CD CE NZ REMARK 470 ASN A 361 CG OD1 ND2 REMARK 470 VAL A 363 CG1 CG2 REMARK 470 LYS A 414 CG CD CE NZ REMARK 470 ASP A 416 CG OD1 OD2 REMARK 470 ASN A 417 CG OD1 ND2 REMARK 470 LYS A 433 CG CD CE NZ REMARK 470 LYS A 434 CG CD CE NZ REMARK 470 ASP A 442 CG OD1 OD2 REMARK 470 LYS A 489 CG CD CE NZ REMARK 470 LYS A 496 CG CD CE NZ REMARK 470 GLN A 536 CG CD OE1 NE2 REMARK 470 LYS A 557 CG CD CE NZ REMARK 470 THR A 567 OG1 CG2 REMARK 470 LYS A 591 CG CD CE NZ REMARK 470 GLN A 603 CG CD OE1 NE2 REMARK 470 THR A 613 OG1 CG2 REMARK 470 ASP A 614 CG OD1 OD2 REMARK 470 PHE A 619 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU A 621 CG CD1 CD2 REMARK 470 ARG A 623 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 625 CG CD OE1 OE2 REMARK 470 LYS A 640 CG CD CE NZ REMARK 470 ASP A 643 CG OD1 OD2 REMARK 470 ARG A 644 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 657 CG CD CE NZ REMARK 470 ASN A 661 CG OD1 ND2 REMARK 470 ARG A 663 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 664 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASN A 417 OG1 THR A 421 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 55 19.66 56.44 REMARK 500 ASP A 58 -39.09 -132.14 REMARK 500 ASP A 90 71.20 -163.64 REMARK 500 SER A 125 -78.88 -76.64 REMARK 500 TRP A 128 -69.26 -155.60 REMARK 500 PHE A 167 76.92 -116.48 REMARK 500 CYS A 241 73.83 -156.32 REMARK 500 LYS A 259 35.54 75.96 REMARK 500 LEU A 294 -44.34 72.18 REMARK 500 SER A 348 -168.29 75.69 REMARK 500 LEU A 439 125.51 -38.62 REMARK 500 ASN A 443 73.11 -169.83 REMARK 500 ALA A 453 149.60 -178.68 REMARK 500 TRP A 460 -62.31 -148.63 REMARK 500 LYS A 527 -31.85 -132.86 REMARK 500 ASP A 565 8.10 -66.31 REMARK 500 ASN A 584 156.67 -49.19 REMARK 500 PHE A 608 19.13 -140.29 REMARK 500 ASP A 614 90.20 57.60 REMARK 500 SER A 624 90.53 -64.56 REMARK 500 GLU A 625 -139.95 -99.51 REMARK 500 LEU A 630 -59.37 75.66 REMARK 500 HIS A 642 -128.69 53.69 REMARK 500 SER A 668 109.45 -57.55 REMARK 500 ARG A 678 87.32 -154.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 701 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 188 OH REMARK 620 2 POP A 704 O3 79.6 REMARK 620 3 POP A 704 P2 125.2 75.6 REMARK 620 4 POP A 704 O4 159.1 84.5 36.2 REMARK 620 5 POP A 704 O6 94.9 86.7 36.3 70.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 702 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 392 OD1 REMARK 620 2 TYR A 426 OH 92.1 REMARK 620 3 TYR A 517 OH 171.0 95.7 REMARK 620 4 HIS A 585 NE2 96.1 90.6 88.3 REMARK 620 5 CO3 A 703 O2 85.5 152.8 85.5 116.6 REMARK 620 6 CO3 A 703 O3 83.7 89.9 91.8 179.4 62.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CO3 A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue POP A 704 DBREF 6CTC A 1 679 UNP P02787 TRFE_HUMAN 20 698 SEQRES 1 A 679 VAL PRO ASP LYS THR VAL ARG TRP CYS ALA VAL SER GLU SEQRES 2 A 679 HIS GLU ALA THR LYS CYS GLN SER PHE ARG ASP HIS MET SEQRES 3 A 679 LYS SER VAL ILE PRO SER ASP GLY PRO SER VAL ALA CYS SEQRES 4 A 679 VAL LYS LYS ALA SER TYR LEU ASP CYS ILE ARG ALA ILE SEQRES 5 A 679 ALA ALA ASN GLU ALA ASP ALA VAL THR LEU ASP ALA GLY SEQRES 6 A 679 LEU VAL TYR ASP ALA TYR LEU ALA PRO ASN ASN LEU LYS SEQRES 7 A 679 PRO VAL VAL ALA GLU PHE TYR GLY SER LYS GLU ASP PRO SEQRES 8 A 679 GLN THR PHE TYR TYR ALA VAL ALA VAL VAL LYS LYS ASP SEQRES 9 A 679 SER GLY PHE GLN MET ASN GLN LEU ARG GLY LYS LYS SER SEQRES 10 A 679 CYS HIS THR GLY LEU GLY ARG SER ALA GLY TRP ASN ILE SEQRES 11 A 679 PRO ILE GLY LEU LEU TYR CYS ASP LEU PRO GLU PRO ARG SEQRES 12 A 679 LYS PRO LEU GLU LYS ALA VAL ALA ASN PHE PHE SER GLY SEQRES 13 A 679 SER CYS ALA PRO CYS ALA ASP GLY THR ASP PHE PRO GLN SEQRES 14 A 679 LEU CYS GLN LEU CYS PRO GLY CYS GLY CYS SER THR LEU SEQRES 15 A 679 ASN GLN TYR PHE GLY TYR SER GLY ALA PHE LYS CYS LEU SEQRES 16 A 679 LYS ASP GLY ALA GLY ASP VAL ALA PHE VAL LYS HIS SER SEQRES 17 A 679 THR ILE PHE GLU ASN LEU ALA ASN LYS ALA ASP ARG ASP SEQRES 18 A 679 GLN TYR GLU LEU LEU CYS LEU ASP ASN THR ARG LYS PRO SEQRES 19 A 679 VAL ASP GLU TYR LYS ASP CYS HIS LEU ALA GLN VAL PRO SEQRES 20 A 679 SER HIS THR VAL VAL ALA ARG SER MET GLY GLY LYS GLU SEQRES 21 A 679 ASP LEU ILE TRP GLU LEU LEU ASN GLN ALA GLN GLU HIS SEQRES 22 A 679 PHE GLY LYS ASP LYS SER LYS GLU PHE GLN LEU PHE SER SEQRES 23 A 679 SER PRO HIS GLY LYS ASP LEU LEU PHE LYS ASP SER ALA SEQRES 24 A 679 HIS GLY PHE LEU LYS VAL PRO PRO ARG MET ASP ALA LYS SEQRES 25 A 679 MET TYR LEU GLY TYR GLU TYR VAL THR ALA ILE ARG ASN SEQRES 26 A 679 LEU ARG GLU GLY THR CYS PRO GLU ALA PRO THR ASP GLU SEQRES 27 A 679 CYS LYS PRO VAL LYS TRP CYS ALA LEU SER HIS HIS GLU SEQRES 28 A 679 ARG LEU LYS CYS ASP GLU TRP SER VAL ASN SER VAL GLY SEQRES 29 A 679 LYS ILE GLU CYS VAL SER ALA GLU THR THR GLU ASP CYS SEQRES 30 A 679 ILE ALA LYS ILE MET ASN GLY GLU ALA ASP ALA MET SER SEQRES 31 A 679 LEU ASP GLY GLY PHE VAL TYR ILE ALA GLY LYS CYS GLY SEQRES 32 A 679 LEU VAL PRO VAL LEU ALA GLU ASN TYR ASN LYS SER ASP SEQRES 33 A 679 ASN CYS GLU ASP THR PRO GLU ALA GLY TYR PHE ALA ILE SEQRES 34 A 679 ALA VAL VAL LYS LYS SER ALA SER ASP LEU THR TRP ASP SEQRES 35 A 679 ASN LEU LYS GLY LYS LYS SER CYS HIS THR ALA VAL GLY SEQRES 36 A 679 ARG THR ALA GLY TRP ASN ILE PRO MET GLY LEU LEU TYR SEQRES 37 A 679 ASN LYS ILE ASN HIS CYS ARG PHE ASP GLU PHE PHE SER SEQRES 38 A 679 GLU GLY CYS ALA PRO GLY SER LYS LYS ASP SER SER LEU SEQRES 39 A 679 CYS LYS LEU CYS MET GLY SER GLY LEU ASN LEU CYS GLU SEQRES 40 A 679 PRO ASN ASN LYS GLU GLY TYR TYR GLY TYR THR GLY ALA SEQRES 41 A 679 PHE ARG CYS LEU VAL GLU LYS GLY ASP VAL ALA PHE VAL SEQRES 42 A 679 LYS HIS GLN THR VAL PRO GLN ASN THR GLY GLY LYS ASN SEQRES 43 A 679 PRO ASP PRO TRP ALA LYS ASN LEU ASN GLU LYS ASP TYR SEQRES 44 A 679 GLU LEU LEU CYS LEU ASP GLY THR ARG LYS PRO VAL GLU SEQRES 45 A 679 GLU TYR ALA ASN CYS HIS LEU ALA ARG ALA PRO ASN HIS SEQRES 46 A 679 ALA VAL VAL THR ARG LYS ASP LYS GLU ALA CYS VAL HIS SEQRES 47 A 679 LYS ILE LEU ARG GLN GLN GLN HIS LEU PHE GLY SER ASN SEQRES 48 A 679 VAL THR ASP CYS SER GLY ASN PHE CYS LEU PHE ARG SER SEQRES 49 A 679 GLU THR LYS ASP LEU LEU PHE ARG ASP ASP THR VAL CYS SEQRES 50 A 679 LEU ALA LYS LEU HIS ASP ARG ASN THR TYR GLU LYS TYR SEQRES 51 A 679 LEU GLY GLU GLU TYR VAL LYS ALA VAL GLY ASN LEU ARG SEQRES 52 A 679 LYS CYS SER THR SER SER LEU LEU GLU ALA CYS THR PHE SEQRES 53 A 679 ARG ARG PRO HET FE A 701 1 HET FE A 702 1 HET CO3 A 703 4 HET POP A 704 9 HETNAM FE FE (III) ION HETNAM CO3 CARBONATE ION HETNAM POP PYROPHOSPHATE 2- FORMUL 2 FE 2(FE 3+) FORMUL 4 CO3 C O3 2- FORMUL 5 POP H2 O7 P2 2- FORMUL 6 HOH *62(H2 O) HELIX 1 AA1 SER A 12 ILE A 30 1 19 HELIX 2 AA2 SER A 44 ALA A 54 1 11 HELIX 3 AA3 ASP A 63 LEU A 72 1 10 HELIX 4 AA4 GLN A 108 LEU A 112 5 5 HELIX 5 AA5 TRP A 128 TYR A 136 1 9 HELIX 6 AA6 CYS A 137 LEU A 139 5 3 HELIX 7 AA7 PRO A 145 ASN A 152 1 8 HELIX 8 AA8 PHE A 167 GLN A 172 5 6 HELIX 9 AA9 PHE A 186 ASP A 197 1 12 HELIX 10 AB1 HIS A 207 GLU A 212 1 6 HELIX 11 AB2 ASN A 216 ASP A 221 1 6 HELIX 12 AB3 ASP A 236 CYS A 241 5 6 HELIX 13 AB4 LYS A 259 GLY A 275 1 17 HELIX 14 AB5 ASP A 310 GLY A 316 1 7 HELIX 15 AB6 GLY A 316 GLY A 329 1 14 HELIX 16 AB7 SER A 348 SER A 362 1 15 HELIX 17 AB8 THR A 373 GLY A 384 1 12 HELIX 18 AB9 ASP A 392 CYS A 402 1 11 HELIX 19 AC1 ASN A 417 THR A 421 5 5 HELIX 20 AC2 TRP A 460 ASN A 472 1 13 HELIX 21 AC3 ARG A 475 PHE A 480 1 6 HELIX 22 AC4 SER A 492 LYS A 496 5 5 HELIX 23 AC5 SER A 501 LEU A 505 5 5 HELIX 24 AC6 TYR A 515 LYS A 527 1 13 HELIX 25 AC7 GLN A 536 THR A 542 1 7 HELIX 26 AC8 ASN A 555 LYS A 557 5 3 HELIX 27 AC9 GLU A 572 CYS A 577 5 6 HELIX 28 AD1 LYS A 593 GLY A 609 1 17 HELIX 29 AD2 THR A 646 LEU A 662 1 17 HELIX 30 AD3 ARG A 663 SER A 666 5 4 HELIX 31 AD4 SER A 668 ARG A 678 1 11 SHEET 1 AA1 2 THR A 5 ALA A 10 0 SHEET 2 AA1 2 SER A 36 LYS A 41 1 O VAL A 40 N ALA A 10 SHEET 1 AA2 4 VAL A 60 LEU A 62 0 SHEET 2 AA2 4 THR A 250 ARG A 254 -1 O VAL A 252 N VAL A 60 SHEET 3 AA2 4 LEU A 77 PHE A 84 -1 N VAL A 81 O VAL A 251 SHEET 4 AA2 4 GLY A 301 LYS A 304 -1 O LEU A 303 N ALA A 82 SHEET 1 AA3 6 GLY A 156 CYS A 158 0 SHEET 2 AA3 6 LYS A 116 HIS A 119 1 N HIS A 119 O CYS A 158 SHEET 3 AA3 6 VAL A 202 LYS A 206 1 O VAL A 202 N CYS A 118 SHEET 4 AA3 6 PHE A 94 LYS A 102 -1 N VAL A 98 O VAL A 205 SHEET 5 AA3 6 TYR A 223 LEU A 226 -1 O LEU A 226 N ALA A 99 SHEET 6 AA3 6 ARG A 232 PRO A 234 -1 O LYS A 233 N LEU A 225 SHEET 1 AA4 5 GLY A 156 CYS A 158 0 SHEET 2 AA4 5 LYS A 116 HIS A 119 1 N HIS A 119 O CYS A 158 SHEET 3 AA4 5 VAL A 202 LYS A 206 1 O VAL A 202 N CYS A 118 SHEET 4 AA4 5 PHE A 94 LYS A 102 -1 N VAL A 98 O VAL A 205 SHEET 5 AA4 5 ALA A 244 PRO A 247 -1 O VAL A 246 N TYR A 95 SHEET 1 AA5 2 VAL A 342 LEU A 347 0 SHEET 2 AA5 2 ILE A 366 ALA A 371 1 O GLU A 367 N TRP A 344 SHEET 1 AA6 4 MET A 389 LEU A 391 0 SHEET 2 AA6 4 ALA A 586 THR A 589 -1 O VAL A 588 N MET A 389 SHEET 3 AA6 4 VAL A 405 ASN A 411 -1 N LEU A 408 O VAL A 587 SHEET 4 AA6 4 CYS A 637 LYS A 640 -1 O ALA A 639 N ALA A 409 SHEET 1 AA7 6 GLU A 482 CYS A 484 0 SHEET 2 AA7 6 LYS A 448 HIS A 451 1 N HIS A 451 O CYS A 484 SHEET 3 AA7 6 VAL A 530 LYS A 534 1 O PHE A 532 N CYS A 450 SHEET 4 AA7 6 TYR A 426 LYS A 433 -1 N VAL A 431 O ALA A 531 SHEET 5 AA7 6 TYR A 559 LEU A 562 -1 O GLU A 560 N VAL A 432 SHEET 6 AA7 6 ARG A 568 PRO A 570 -1 O LYS A 569 N LEU A 561 SHEET 1 AA8 5 GLU A 482 CYS A 484 0 SHEET 2 AA8 5 LYS A 448 HIS A 451 1 N HIS A 451 O CYS A 484 SHEET 3 AA8 5 VAL A 530 LYS A 534 1 O PHE A 532 N CYS A 450 SHEET 4 AA8 5 TYR A 426 LYS A 433 -1 N VAL A 431 O ALA A 531 SHEET 5 AA8 5 ALA A 580 ALA A 582 -1 O ALA A 580 N ALA A 428 SSBOND 1 CYS A 9 CYS A 48 1555 1555 2.06 SSBOND 2 CYS A 19 CYS A 39 1555 1555 2.06 SSBOND 3 CYS A 118 CYS A 194 1555 1555 2.04 SSBOND 4 CYS A 137 CYS A 331 1555 1555 2.05 SSBOND 5 CYS A 158 CYS A 174 1555 1555 2.03 SSBOND 6 CYS A 161 CYS A 179 1555 1555 2.04 SSBOND 7 CYS A 171 CYS A 177 1555 1555 2.02 SSBOND 8 CYS A 227 CYS A 241 1555 1555 2.02 SSBOND 9 CYS A 339 CYS A 596 1555 1555 2.02 SSBOND 10 CYS A 345 CYS A 377 1555 1555 2.12 SSBOND 11 CYS A 355 CYS A 368 1555 1555 2.05 SSBOND 12 CYS A 402 CYS A 674 1555 1555 2.03 SSBOND 13 CYS A 418 CYS A 637 1555 1555 2.05 SSBOND 14 CYS A 450 CYS A 523 1555 1555 2.01 SSBOND 15 CYS A 474 CYS A 665 1555 1555 2.03 SSBOND 16 CYS A 484 CYS A 498 1555 1555 2.04 SSBOND 17 CYS A 495 CYS A 506 1555 1555 2.02 SSBOND 18 CYS A 563 CYS A 577 1555 1555 2.03 SSBOND 19 CYS A 615 CYS A 620 1555 1555 2.02 LINK OH TYR A 188 FE FE A 701 1555 1555 2.54 LINK OD1 ASP A 392 FE FE A 702 1555 1555 2.06 LINK OH TYR A 426 FE FE A 702 1555 1555 2.13 LINK OH TYR A 517 FE FE A 702 1555 1555 1.95 LINK NE2 HIS A 585 FE FE A 702 1555 1555 2.19 LINK FE FE A 701 O3 POP A 704 1555 1555 2.56 LINK FE FE A 701 P2 POP A 704 1555 1555 2.55 LINK FE FE A 701 O4 POP A 704 1555 1555 2.14 LINK FE FE A 701 O6 POP A 704 1555 1555 2.14 LINK FE FE A 702 O2 CO3 A 703 1555 1555 2.47 LINK FE FE A 702 O3 CO3 A 703 1555 1555 1.77 CISPEP 1 ALA A 73 PRO A 74 0 4.66 CISPEP 2 GLU A 141 PRO A 142 0 -2.34 CISPEP 3 LYS A 144 PRO A 145 0 -0.23 SITE 1 AC1 3 ARG A 124 TYR A 188 POP A 704 SITE 1 AC2 5 ASP A 392 TYR A 426 TYR A 517 HIS A 585 SITE 2 AC2 5 CO3 A 703 SITE 1 AC3 9 ASP A 392 TYR A 426 THR A 452 ARG A 456 SITE 2 AC3 9 THR A 457 ALA A 458 GLY A 459 TYR A 517 SITE 3 AC3 9 FE A 702 SITE 1 AC4 10 ASP A 63 TYR A 95 ARG A 124 SER A 125 SITE 2 AC4 10 TYR A 188 LYS A 206 LYS A 296 FE A 701 SITE 3 AC4 10 HOH A 813 HOH A 838 CRYST1 74.370 90.160 110.430 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013446 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011091 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009056 0.00000