HEADER TRANSFERASE/TRANSFERASE INHIBITOR 23-MAR-18 6CTH TITLE CRYSTAL STRUCTURE OF PATHOGENESIS-RELATED PROTEIN 1G (PR-1G) KINASE TITLE 2 DOMAIN FROM CACAO COMPND MOL_ID: 1; COMPND 2 MOLECULE: CONCANAVALIN A-LIKE LECTIN PROTEIN KINASE FAMILY PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KINASE DOMAIN (UNP RESIDUES 255-560); COMPND 5 SYNONYM: PATHOGENESIS-RELATED PROTEIN 1G; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THEOBROMA CACAO; SOURCE 3 ORGANISM_COMMON: CACAO; SOURCE 4 ORGANISM_TAXID: 3641; SOURCE 5 GENE: TCM_042446; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: R3 KEYWDS STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, KEYWDS 2 TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR T.R.TOSARINI,G.S.PROFETA,C.V.DOS REIS,R.M.COUNAGO,K.B.MASSIRER, AUTHOR 2 A.M.EDWARDS,J.M.ELKINS,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 3 04-OCT-23 6CTH 1 LINK REVDAT 2 01-JAN-20 6CTH 1 REMARK REVDAT 1 11-APR-18 6CTH 0 JRNL AUTH T.R.TOSARINI,G.S.PROFETA,C.V.DOS REIS,R.M.COUNAGO, JRNL AUTH 2 K.B.MASSIRER,J.M.C.MONDEGO,A.M.EDWARDS,J.M.ELKINS JRNL TITL CRYSTAL STRUCTURE OF PATHOGENESIS-RELATED PROTEIN 1G (PR-1G) JRNL TITL 2 KINASE DOMAIN FROM CACAO JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0189 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 37364 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1977 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2686 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.3080 REMARK 3 BIN FREE R VALUE SET COUNT : 121 REMARK 3 BIN FREE R VALUE : 0.3200 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2255 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 145 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.52000 REMARK 3 B22 (A**2) : 0.52000 REMARK 3 B33 (A**2) : -1.68000 REMARK 3 B12 (A**2) : 0.26000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.108 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.106 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.098 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.977 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2365 ; 0.014 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2209 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3205 ; 1.629 ; 1.955 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5088 ; 1.013 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 297 ; 5.954 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 93 ;32.943 ;23.118 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 390 ;14.059 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;24.890 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 357 ; 0.096 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2783 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 504 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1189 ; 1.406 ; 2.072 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1189 ; 1.403 ; 2.071 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1486 ; 2.370 ; 3.088 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1486 ; 2.370 ; 3.089 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1175 ; 1.619 ; 2.295 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1176 ; 1.619 ; 2.298 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1720 ; 2.666 ; 3.364 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2650 ; 5.899 ;24.991 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2621 ; 5.856 ;24.570 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 254 A 299 REMARK 3 ORIGIN FOR THE GROUP (A): -13.6865 5.6293 14.9476 REMARK 3 T TENSOR REMARK 3 T11: 0.0415 T22: 0.5205 REMARK 3 T33: 0.1381 T12: -0.0741 REMARK 3 T13: 0.0209 T23: 0.0216 REMARK 3 L TENSOR REMARK 3 L11: 4.4609 L22: 0.0741 REMARK 3 L33: 0.5650 L12: 0.3650 REMARK 3 L13: 1.0141 L23: 0.1985 REMARK 3 S TENSOR REMARK 3 S11: 0.0229 S12: -0.3197 S13: -0.0022 REMARK 3 S21: 0.0120 S22: -0.0987 S23: 0.0081 REMARK 3 S31: 0.0579 S32: -0.3258 S33: 0.0757 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 300 A 417 REMARK 3 ORIGIN FOR THE GROUP (A): 4.2698 6.7551 16.7201 REMARK 3 T TENSOR REMARK 3 T11: 0.1575 T22: 0.4196 REMARK 3 T33: 0.1236 T12: -0.1035 REMARK 3 T13: -0.0036 T23: 0.0026 REMARK 3 L TENSOR REMARK 3 L11: 0.2813 L22: 0.0866 REMARK 3 L33: 1.3419 L12: 0.0987 REMARK 3 L13: -0.2816 L23: -0.2371 REMARK 3 S TENSOR REMARK 3 S11: -0.0159 S12: 0.1731 S13: -0.0338 REMARK 3 S21: 0.0608 S22: -0.0422 S23: -0.0246 REMARK 3 S31: -0.0309 S32: -0.1157 S33: 0.0581 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 418 A 554 REMARK 3 ORIGIN FOR THE GROUP (A): 21.1246 13.1317 8.5168 REMARK 3 T TENSOR REMARK 3 T11: 0.1141 T22: 0.5263 REMARK 3 T33: 0.0990 T12: -0.0911 REMARK 3 T13: -0.0244 T23: 0.0796 REMARK 3 L TENSOR REMARK 3 L11: 0.3139 L22: 0.5397 REMARK 3 L33: 1.0993 L12: -0.0556 REMARK 3 L13: -0.3252 L23: 0.1531 REMARK 3 S TENSOR REMARK 3 S11: 0.0593 S12: 0.1709 S13: -0.0209 REMARK 3 S21: 0.0230 S22: -0.1145 S23: -0.0233 REMARK 3 S31: -0.1252 S32: 0.3114 S33: 0.0551 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6CTH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1000233366. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979100 REMARK 200 MONOCHROMATOR : CRYO-COOLED DOUBLE CRYSTAL REMARK 200 SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39498 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 18.60 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 18.80 REMARK 200 R MERGE FOR SHELL (I) : 1.73000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3UIM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% PEG8000, 0.2 M MAGNESIUM ACETATE, REMARK 280 0.1 M SSB BUFFER, PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 119.34667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 238.69333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 179.02000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 298.36667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 59.67333 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 119.34667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 238.69333 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 298.36667 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 179.02000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 59.67333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 253 REMARK 465 HIS A 420 REMARK 465 ALA A 421 REMARK 465 LYS A 422 REMARK 465 GLY A 423 REMARK 465 LEU A 424 REMARK 465 LYS A 425 REMARK 465 PRO A 555 REMARK 465 ASN A 556 REMARK 465 TYR A 557 REMARK 465 ASN A 558 REMARK 465 ASP A 559 REMARK 465 VAL A 560 REMARK 465 GLN A 561 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 274 CG CD CE NZ REMARK 470 ASP A 290 CG OD1 OD2 REMARK 470 ASP A 292 CG OD1 OD2 REMARK 470 ARG A 302 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 305 CG CD CE NZ REMARK 470 LYS A 309 CG CD CE NZ REMARK 470 LYS A 328 CG CD CE NZ REMARK 470 ARG A 336 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 344 CG CD OE1 OE2 REMARK 470 LYS A 359 CG CD CE NZ REMARK 470 GLU A 365 CG CD OE1 OE2 REMARK 470 LYS A 426 CG CD CE NZ REMARK 470 LYS A 445 CG CD CE NZ REMARK 470 GLU A 474 CG CD OE1 OE2 REMARK 470 GLU A 475 CG CD OE1 OE2 REMARK 470 GLU A 477 CG CD OE1 OE2 REMARK 470 ARG A 500 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 280 37.62 -146.86 REMARK 500 ARG A 336 -130.68 59.26 REMARK 500 ARG A 392 -0.43 77.78 REMARK 500 ASP A 393 44.70 -148.80 REMARK 500 ASP A 411 89.52 60.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 393 OD2 REMARK 620 2 ASP A 411 OD2 98.4 REMARK 620 3 HOH A 714 O 171.1 89.3 REMARK 620 4 HOH A 757 O 90.0 82.8 95.5 REMARK 620 5 HOH A 767 O 86.5 174.1 86.1 93.9 REMARK 620 6 HOH A 816 O 94.1 90.2 81.4 172.4 92.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE7 A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 603 DBREF1 6CTH A 255 560 UNP A0A061FLD4_THECC DBREF2 6CTH A A0A061FLD4 255 560 SEQADV 6CTH SER A 253 UNP A0A061FLD EXPRESSION TAG SEQADV 6CTH MET A 254 UNP A0A061FLD EXPRESSION TAG SEQADV 6CTH GLN A 561 UNP A0A061FLD EXPRESSION TAG SEQRES 1 A 309 SER MET ARG LYS PHE SER LEU ASN GLU LEU ALA LYS VAL SEQRES 2 A 309 THR SER ASN PHE ASN ALA GLU ASN LYS LEU GLY GLU GLY SEQRES 3 A 309 GLY PHE GLY SER VAL TYR ARG GLY PHE LEU ARG ASP SER SEQRES 4 A 309 ASP THR TYR ILE ALA VAL LYS LYS VAL SER ARG ALA SER SEQRES 5 A 309 LYS GLN GLY ILE LYS GLU TYR ALA SER GLU VAL LYS ILE SEQRES 6 A 309 ILE SER ARG LEU ARG HIS LYS ASN LEU VAL LYS LEU ILE SEQRES 7 A 309 GLY TRP CYS HIS GLU ARG GLY GLU LEU MET LEU VAL TYR SEQRES 8 A 309 GLU PHE MET ALA ASN GLY SER LEU ASP SER HIS ILE PHE SEQRES 9 A 309 LYS GLY LYS SER LEU LEU THR TRP GLU VAL ARG TYR ARG SEQRES 10 A 309 ILE VAL LYS ASP LEU ALA SER ALA LEU LEU TYR LEU HIS SEQRES 11 A 309 GLU GLU GLY ASP HIS CYS VAL LEU HIS ARG ASP ILE LYS SEQRES 12 A 309 THR SER ASN ILE MET LEU ASP SER SER PHE ASN ALA LYS SEQRES 13 A 309 LEU GLY ASP PHE GLY LEU ALA ARG LEU VAL ASP HIS ALA SEQRES 14 A 309 LYS GLY LEU LYS LYS THR LEU LEU ALA GLY THR VAL GLY SEQRES 15 A 309 TYR MET ALA PRO GLU CYS LEU SER SER GLY LYS ALA SER SEQRES 16 A 309 LYS GLU SER ASP VAL TYR SER PHE GLY VAL VAL ALA LEU SEQRES 17 A 309 GLU ILE ALA SER GLY ARG ARG SER ILE GLU PRO LYS PHE SEQRES 18 A 309 GLU GLU SER GLU ALA LEU LEU LEU VAL PRO TRP VAL TRP SEQRES 19 A 309 GLU SER TYR GLY ASN GLU ARG ILE LEU ASP ILE ALA ASP SEQRES 20 A 309 ARG LYS LEU GLY MET ALA PHE ASP PRO LYS GLN LEU GLU SEQRES 21 A 309 CYS LEU VAL MET VAL GLY LEU TRP CYS ALA HIS PRO SER SEQRES 22 A 309 HIS ASN LEU ARG PRO SER ILE ARG GLN VAL ILE GLN VAL SEQRES 23 A 309 LEU ASN PHE GLU ALA PRO LEU PRO ASN LEU PRO GLY SER SEQRES 24 A 309 MET PRO ILE PRO ASN TYR ASN ASP VAL GLN HET FE7 A 601 37 HET MG A 602 1 HET ACT A 603 4 HETNAM FE7 N-{(3Z)-2-OXO-3-[PHENYL({4-[(PIPERIDIN-1-YL) HETNAM 2 FE7 METHYL]PHENYL}AMINO)METHYLIDENE]-2,3-DIHYDRO-1H-INDOL- HETNAM 3 FE7 5-YL}ETHANESULFONAMIDE HETNAM MG MAGNESIUM ION HETNAM ACT ACETATE ION FORMUL 2 FE7 C29 H32 N4 O3 S FORMUL 3 MG MG 2+ FORMUL 4 ACT C2 H3 O2 1- FORMUL 5 HOH *145(H2 O) HELIX 1 AA1 SER A 258 SER A 267 1 10 HELIX 2 AA2 ASN A 270 GLU A 272 5 3 HELIX 3 AA3 LYS A 305 SER A 319 1 15 HELIX 4 AA4 SER A 350 PHE A 356 1 7 HELIX 5 AA5 THR A 363 GLU A 384 1 22 HELIX 6 AA6 LYS A 395 SER A 397 5 3 HELIX 7 AA7 ALA A 437 GLY A 444 1 8 HELIX 8 AA8 SER A 447 GLY A 465 1 19 HELIX 9 AA9 LEU A 480 ASN A 491 1 12 HELIX 10 AB1 ARG A 493 ALA A 498 5 6 HELIX 11 AB2 ASP A 499 GLY A 503 5 5 HELIX 12 AB3 ASP A 507 ALA A 522 1 16 HELIX 13 AB4 SER A 525 ARG A 529 5 5 HELIX 14 AB5 SER A 531 ASN A 540 1 10 SHEET 1 AA1 6 ARG A 255 LYS A 256 0 SHEET 2 AA1 6 LEU A 329 GLU A 335 1 O TRP A 332 N ARG A 255 SHEET 3 AA1 6 GLU A 338 GLU A 344 -1 O VAL A 342 N ILE A 330 SHEET 4 AA1 6 THR A 293 VAL A 300 -1 N LYS A 298 O LEU A 341 SHEET 5 AA1 6 GLY A 281 LEU A 288 -1 N LEU A 288 O THR A 293 SHEET 6 AA1 6 LYS A 274 GLU A 277 -1 N LEU A 275 O VAL A 283 SHEET 1 AA2 2 CYS A 388 LEU A 390 0 SHEET 2 AA2 2 ARG A 416 VAL A 418 -1 O VAL A 418 N CYS A 388 SHEET 1 AA3 2 ILE A 399 LEU A 401 0 SHEET 2 AA3 2 ALA A 407 LEU A 409 -1 O LYS A 408 N MET A 400 LINK OD2 ASP A 393 MG MG A 602 1555 1555 2.00 LINK OD2 ASP A 411 MG MG A 602 1555 1555 2.14 LINK MG MG A 602 O HOH A 714 1555 1555 2.21 LINK MG MG A 602 O HOH A 757 1555 1555 2.02 LINK MG MG A 602 O HOH A 767 1555 1555 2.08 LINK MG MG A 602 O HOH A 816 1555 1555 2.11 SITE 1 AC1 13 LEU A 275 GLY A 278 GLY A 279 ALA A 296 SITE 2 AC1 13 LYS A 298 TYR A 343 GLU A 344 PHE A 345 SITE 3 AC1 13 MET A 346 SER A 350 SER A 397 MET A 400 SITE 4 AC1 13 ASP A 411 SITE 1 AC2 6 ASP A 393 ASP A 411 HOH A 714 HOH A 757 SITE 2 AC2 6 HOH A 767 HOH A 816 SITE 1 AC3 4 PHE A 287 ARG A 289 PRO A 546 ASN A 547 CRYST1 56.798 56.798 358.040 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017606 0.010165 0.000000 0.00000 SCALE2 0.000000 0.020330 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002793 0.00000