HEADER EXOCYTOSIS 04-APR-18 6CXW TITLE SYNAPTOTAGMIN 1 C2A BETA4 CHIMERA WITH ENHANCED PIP2 BINDING FUNCTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: SYNAPTOTAGMIN 1 C2A BETA4 CHIMERA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SYNAPTOTAGMIN I,SYTI,P65; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: SYT1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS C2 DOMAIN, EXOCYTOSIS EXPDTA X-RAY DIFFRACTION AUTHOR R.B.SUTTON REVDAT 3 04-OCT-23 6CXW 1 REMARK REVDAT 2 27-NOV-19 6CXW 1 REMARK REVDAT 1 17-APR-19 6CXW 0 JRNL AUTH C.S.EVANS,X.LOU,H.BAI,A.M.RICE,L.SALCIDO-HOLGUIN, JRNL AUTH 2 E.N.RODRIGUEZ,R.B.SUTTON,E.R.CHAPMAN JRNL TITL ENGINEERING A C2-DOMAIN TO BIND PIP2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.83 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.83 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 3 NUMBER OF REFLECTIONS : 9763 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.010 REMARK 3 FREE R VALUE TEST SET COUNT : 977 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.7329 - 3.5035 0.93 1301 145 0.1538 0.1801 REMARK 3 2 3.5035 - 2.7814 0.96 1276 142 0.1803 0.2175 REMARK 3 3 2.7814 - 2.4299 0.97 1261 141 0.1960 0.2492 REMARK 3 4 2.4299 - 2.2078 0.98 1277 141 0.1803 0.2286 REMARK 3 5 2.2078 - 2.0496 0.99 1260 140 0.1720 0.2139 REMARK 3 6 2.0496 - 1.9288 1.00 1277 142 0.1827 0.2204 REMARK 3 7 1.9288 - 1.8322 0.89 1134 126 0.1937 0.2099 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.590 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 1054 REMARK 3 ANGLE : 0.716 1421 REMARK 3 CHIRALITY : 0.049 155 REMARK 3 PLANARITY : 0.005 182 REMARK 3 DIHEDRAL : 15.397 635 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 141 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.1465 5.1430 -20.4413 REMARK 3 T TENSOR REMARK 3 T11: 0.1132 T22: 0.0647 REMARK 3 T33: 0.1123 T12: 0.0147 REMARK 3 T13: -0.0057 T23: 0.0113 REMARK 3 L TENSOR REMARK 3 L11: 2.2836 L22: 2.2916 REMARK 3 L33: 4.5117 L12: -0.1071 REMARK 3 L13: 1.1927 L23: 0.0258 REMARK 3 S TENSOR REMARK 3 S11: -0.0054 S12: 0.1965 S13: 0.0527 REMARK 3 S21: -0.3268 S22: -0.0291 S23: 0.0410 REMARK 3 S31: -0.4185 S32: 0.3851 S33: 0.0292 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 167 THROUGH 178 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.2053 -0.9235 3.3708 REMARK 3 T TENSOR REMARK 3 T11: 0.2697 T22: 0.4692 REMARK 3 T33: 0.1546 T12: 0.0234 REMARK 3 T13: -0.0370 T23: 0.0387 REMARK 3 L TENSOR REMARK 3 L11: 2.6330 L22: 5.6503 REMARK 3 L33: 3.1585 L12: 0.7431 REMARK 3 L13: 1.1426 L23: -0.8550 REMARK 3 S TENSOR REMARK 3 S11: -0.1034 S12: -1.5807 S13: -0.3310 REMARK 3 S21: 1.0919 S22: 0.2919 S23: -0.1058 REMARK 3 S31: -0.1151 S32: 0.1387 S33: 0.2413 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 179 THROUGH 187 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.8583 -5.7186 -16.8880 REMARK 3 T TENSOR REMARK 3 T11: 0.1013 T22: 0.0455 REMARK 3 T33: 0.1045 T12: 0.0108 REMARK 3 T13: 0.0135 T23: -0.0050 REMARK 3 L TENSOR REMARK 3 L11: 5.8782 L22: 0.5532 REMARK 3 L33: 6.0192 L12: 0.4983 REMARK 3 L13: 5.0294 L23: 0.4395 REMARK 3 S TENSOR REMARK 3 S11: 0.0567 S12: -0.0269 S13: -0.1323 REMARK 3 S21: -0.1316 S22: -0.0881 S23: -0.0079 REMARK 3 S31: 0.2022 S32: 0.0569 S33: -0.2225 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 188 THROUGH 196 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.4435 -9.4767 -21.9624 REMARK 3 T TENSOR REMARK 3 T11: 0.1460 T22: -0.0075 REMARK 3 T33: 0.2249 T12: 0.0379 REMARK 3 T13: -0.0385 T23: -0.0326 REMARK 3 L TENSOR REMARK 3 L11: 5.1421 L22: 0.9889 REMARK 3 L33: 2.4939 L12: -0.1242 REMARK 3 L13: 2.4581 L23: 0.2735 REMARK 3 S TENSOR REMARK 3 S11: 0.3906 S12: 0.1841 S13: -0.6907 REMARK 3 S21: -0.1209 S22: 0.1145 S23: -0.1812 REMARK 3 S31: 0.3759 S32: -0.1057 S33: -0.2044 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 197 THROUGH 215 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.7324 1.0698 -13.5141 REMARK 3 T TENSOR REMARK 3 T11: 0.0496 T22: 0.0804 REMARK 3 T33: 0.1220 T12: -0.0054 REMARK 3 T13: 0.0061 T23: 0.0273 REMARK 3 L TENSOR REMARK 3 L11: 1.6387 L22: 2.1633 REMARK 3 L33: 2.3373 L12: -0.1259 REMARK 3 L13: 0.0530 L23: 0.7340 REMARK 3 S TENSOR REMARK 3 S11: -0.0095 S12: -0.0455 S13: -0.0157 REMARK 3 S21: -0.1724 S22: -0.0507 S23: -0.1425 REMARK 3 S31: -0.1946 S32: 0.2295 S33: -0.0165 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 216 THROUGH 232 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.8159 -2.2115 -22.1834 REMARK 3 T TENSOR REMARK 3 T11: 0.1587 T22: 0.0821 REMARK 3 T33: 0.1118 T12: 0.0458 REMARK 3 T13: -0.0113 T23: -0.0159 REMARK 3 L TENSOR REMARK 3 L11: 1.9365 L22: 1.4309 REMARK 3 L33: 2.2726 L12: 0.2861 REMARK 3 L13: -0.4798 L23: 0.0543 REMARK 3 S TENSOR REMARK 3 S11: 0.0284 S12: 0.1319 S13: 0.1368 REMARK 3 S21: -0.3576 S22: -0.2429 S23: 0.0662 REMARK 3 S31: 0.1620 S32: -0.3783 S33: 0.0299 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 233 THROUGH 239 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.0579 -13.1546 -3.2038 REMARK 3 T TENSOR REMARK 3 T11: 0.1524 T22: 0.1899 REMARK 3 T33: 0.1168 T12: 0.0358 REMARK 3 T13: -0.0113 T23: 0.0463 REMARK 3 L TENSOR REMARK 3 L11: 0.9682 L22: 5.4906 REMARK 3 L33: 4.8103 L12: -2.1192 REMARK 3 L13: 0.5083 L23: -1.1761 REMARK 3 S TENSOR REMARK 3 S11: -0.2123 S12: -0.6586 S13: -0.0565 REMARK 3 S21: 0.2340 S22: 0.1794 S23: -0.0583 REMARK 3 S31: 0.0172 S32: 0.0148 S33: -0.0171 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 240 THROUGH 257 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.6822 2.5098 -18.1718 REMARK 3 T TENSOR REMARK 3 T11: 0.0845 T22: 0.0856 REMARK 3 T33: 0.0911 T12: 0.0151 REMARK 3 T13: 0.0280 T23: -0.0143 REMARK 3 L TENSOR REMARK 3 L11: 2.7369 L22: 0.1426 REMARK 3 L33: 0.8583 L12: -0.0774 REMARK 3 L13: 1.1185 L23: 0.1241 REMARK 3 S TENSOR REMARK 3 S11: 0.0098 S12: 0.0490 S13: -0.0976 REMARK 3 S21: -0.0269 S22: 0.0128 S23: 0.0905 REMARK 3 S31: 0.0746 S32: -0.1054 S33: -0.0607 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 258 THROUGH 267 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.1824 5.1034 -10.6362 REMARK 3 T TENSOR REMARK 3 T11: 0.0877 T22: 0.1360 REMARK 3 T33: 0.1572 T12: 0.0245 REMARK 3 T13: 0.0177 T23: 0.0336 REMARK 3 L TENSOR REMARK 3 L11: 1.3541 L22: 1.9065 REMARK 3 L33: 3.1079 L12: -0.3399 REMARK 3 L13: 0.2158 L23: -0.8266 REMARK 3 S TENSOR REMARK 3 S11: 0.1257 S12: -0.1421 S13: 0.0503 REMARK 3 S21: 0.1492 S22: 0.1980 S23: 0.5699 REMARK 3 S31: -0.3473 S32: -0.2075 S33: -0.2376 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6CXW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-APR-18. REMARK 100 THE DEPOSITION ID IS D_1000232438. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JAN-16 REMARK 200 TEMPERATURE (KELVIN) : 90 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL7-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.283572 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : RH COASTED FLAT BENT MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9789 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.830 REMARK 200 RESOLUTION RANGE LOW (A) : 31.730 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 8.700 REMARK 200 R MERGE (I) : 0.03400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 51.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.83 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.87 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : 0.06900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4WEE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50% PEG-4000, 0.4 MM SODIUM ACETATE, REMARK 280 100 MM TRIS, PH 8.5, VAPOR DIFFUSION, TEMPERATURE 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 13.57150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.63900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.55250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.63900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 13.57150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 22.55250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 140 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH TYR A 180 HD1 HIS A 239 1.35 REMARK 500 O HOH A 343 O HOH A 380 1.56 REMARK 500 O HOH A 317 O HOH A 404 2.01 REMARK 500 OD1 ASP A 150 O HOH A 301 2.08 REMARK 500 O HOH A 325 O HOH A 380 2.09 REMARK 500 O HOH A 358 O HOH A 427 2.14 REMARK 500 O HOH A 377 O HOH A 402 2.15 REMARK 500 OE1 GLU A 259 O HOH A 302 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 317 O HOH A 416 2655 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 173 79.04 16.47 REMARK 500 ASN A 188 -108.67 53.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP A 172 MET A 173 142.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4WEE RELATED DB: PDB REMARK 900 WILD TYPE SYNAPTOTAGMIN C2A DBREF 6CXW A 140 182 UNP P21707 SYT1_RAT 140 182 DBREF 6CXW A 203 267 UNP P21707 SYT1_RAT 201 265 SEQADV 6CXW ILE A 183 UNP P21707 LINKER SEQADV 6CXW HIS A 184 UNP P21707 LINKER SEQADV 6CXW LEU A 185 UNP P21707 LINKER SEQADV 6CXW MET A 186 UNP P21707 LINKER SEQADV 6CXW GLN A 187 UNP P21707 LINKER SEQADV 6CXW ASN A 188 UNP P21707 LINKER SEQADV 6CXW GLY A 189 UNP P21707 LINKER SEQADV 6CXW LYS A 190 UNP P21707 LINKER SEQADV 6CXW ARG A 191 UNP P21707 LINKER SEQADV 6CXW LEU A 192 UNP P21707 LINKER SEQADV 6CXW LYS A 193 UNP P21707 LINKER SEQADV 6CXW LYS A 194 UNP P21707 LINKER SEQADV 6CXW LYS A 195 UNP P21707 LINKER SEQADV 6CXW LYS A 196 UNP P21707 LINKER SEQADV 6CXW THR A 197 UNP P21707 LINKER SEQADV 6CXW THR A 198 UNP P21707 LINKER SEQADV 6CXW ILE A 199 UNP P21707 LINKER SEQADV 6CXW LYS A 200 UNP P21707 LINKER SEQADV 6CXW LYS A 201 UNP P21707 LINKER SEQADV 6CXW ASN A 202 UNP P21707 LINKER SEQRES 1 A 128 GLU LYS LEU GLY LYS LEU GLN TYR SER LEU ASP TYR ASP SEQRES 2 A 128 PHE GLN ASN ASN GLN LEU LEU VAL GLY ILE ILE GLN ALA SEQRES 3 A 128 ALA GLU LEU PRO ALA LEU ASP MET GLY GLY THR SER ASP SEQRES 4 A 128 PRO TYR VAL LYS ILE HIS LEU MET GLN ASN GLY LYS ARG SEQRES 5 A 128 LEU LYS LYS LYS LYS THR THR ILE LYS LYS ASN THR LEU SEQRES 6 A 128 ASN PRO VAL PHE ASN GLU GLN PHE THR PHE LYS VAL PRO SEQRES 7 A 128 TYR SER GLU LEU GLY GLY LYS THR LEU VAL MET ALA VAL SEQRES 8 A 128 TYR ASP PHE ASP ARG PHE SER LYS HIS ASP ILE ILE GLY SEQRES 9 A 128 GLU PHE LYS VAL PRO MET ASN THR VAL ASP PHE GLY HIS SEQRES 10 A 128 VAL THR GLU GLU TRP ARG ASP LEU GLN SER ALA FORMUL 2 HOH *131(H2 O) HELIX 1 AA1 PRO A 217 LEU A 221 5 5 SHEET 1 AA1 4 VAL A 207 LYS A 215 0 SHEET 2 AA1 4 GLN A 157 ALA A 166 -1 N VAL A 160 O PHE A 212 SHEET 3 AA1 4 LYS A 144 ASP A 152 -1 N ASP A 150 O LEU A 159 SHEET 4 AA1 4 THR A 258 ASP A 263 -1 O THR A 258 N LEU A 149 SHEET 1 AA2 4 LYS A 190 LYS A 196 0 SHEET 2 AA2 4 PRO A 179 GLN A 187 -1 N LEU A 185 O LEU A 192 SHEET 3 AA2 4 LYS A 224 ASP A 232 -1 O ALA A 229 N LYS A 182 SHEET 4 AA2 4 ASP A 240 PRO A 248 -1 O GLY A 243 N VAL A 230 CRYST1 27.143 45.105 89.278 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.036842 0.000000 0.000000 0.00000 SCALE2 0.000000 0.022170 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011201 0.00000