data_6CYM # _entry.id 6CYM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6CYM WWPDB D_1000233724 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6CYM _pdbx_database_status.recvd_initial_deposition_date 2018-04-06 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Sivaraja, M.' 1 ? 'Williams, D.C.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'PLoS ONE' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1932-6203 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 13 _citation.language ? _citation.page_first e0201377 _citation.page_last e0201377 _citation.title 'Reversible covalent direct thrombin inhibitors.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1371/journal.pone.0201377 _citation.pdbx_database_id_PubMed 30071045 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sivaraja, M.' 1 0000-0001-5103-2182 primary 'Pozzi, N.' 2 ? primary 'Rienzo, M.' 3 ? primary 'Lin, K.' 4 ? primary 'Shiau, T.P.' 5 ? primary 'Clemens, D.M.' 6 ? primary 'Igoudin, L.' 7 ? primary 'Zalicki, P.' 8 ? primary 'Chang, S.S.' 9 ? primary 'Estiarte, M.A.' 10 ? primary 'Short, K.M.' 11 ? primary 'Williams, D.C.' 12 ? primary 'Datta, A.' 13 ? primary 'Di Cera, E.' 14 ? primary 'Kita, D.B.' 15 ? # _cell.entry_id 6CYM _cell.length_a 91.670 _cell.length_b 99.730 _cell.length_c 146.010 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CYM _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat Prothrombin 29780.219 2 3.4.21.5 ? ? ? 2 polymer nat Prothrombin 3303.715 2 3.4.21.5 ? ? ? 3 non-polymer syn '2-methoxybenzoic acid' 152.147 2 ? ? ? ? 4 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 5 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 6 water nat water 18.015 22 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Coagulation factor II' 2 'Coagulation factor II' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; A,C ? 2 'polypeptide(L)' no no ADCGLRPLFEKKSLEDKTERELLESYID ADCGLRPLFEKKSLEDKTERELLESYID B,D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 VAL n 1 3 GLU n 1 4 GLY n 1 5 SER n 1 6 ASP n 1 7 ALA n 1 8 GLU n 1 9 ILE n 1 10 GLY n 1 11 MET n 1 12 SER n 1 13 PRO n 1 14 TRP n 1 15 GLN n 1 16 VAL n 1 17 MET n 1 18 LEU n 1 19 PHE n 1 20 ARG n 1 21 LYS n 1 22 SER n 1 23 PRO n 1 24 GLN n 1 25 GLU n 1 26 LEU n 1 27 LEU n 1 28 CYS n 1 29 GLY n 1 30 ALA n 1 31 SER n 1 32 LEU n 1 33 ILE n 1 34 SER n 1 35 ASP n 1 36 ARG n 1 37 TRP n 1 38 VAL n 1 39 LEU n 1 40 THR n 1 41 ALA n 1 42 ALA n 1 43 HIS n 1 44 CYS n 1 45 LEU n 1 46 LEU n 1 47 TYR n 1 48 PRO n 1 49 PRO n 1 50 TRP n 1 51 ASP n 1 52 LYS n 1 53 ASN n 1 54 PHE n 1 55 THR n 1 56 GLU n 1 57 ASN n 1 58 ASP n 1 59 LEU n 1 60 LEU n 1 61 VAL n 1 62 ARG n 1 63 ILE n 1 64 GLY n 1 65 LYS n 1 66 HIS n 1 67 SER n 1 68 ARG n 1 69 THR n 1 70 ARG n 1 71 TYR n 1 72 GLU n 1 73 ARG n 1 74 ASN n 1 75 ILE n 1 76 GLU n 1 77 LYS n 1 78 ILE n 1 79 SER n 1 80 MET n 1 81 LEU n 1 82 GLU n 1 83 LYS n 1 84 ILE n 1 85 TYR n 1 86 ILE n 1 87 HIS n 1 88 PRO n 1 89 ARG n 1 90 TYR n 1 91 ASN n 1 92 TRP n 1 93 ARG n 1 94 GLU n 1 95 ASN n 1 96 LEU n 1 97 ASP n 1 98 ARG n 1 99 ASP n 1 100 ILE n 1 101 ALA n 1 102 LEU n 1 103 MET n 1 104 LYS n 1 105 LEU n 1 106 LYS n 1 107 LYS n 1 108 PRO n 1 109 VAL n 1 110 ALA n 1 111 PHE n 1 112 SER n 1 113 ASP n 1 114 TYR n 1 115 ILE n 1 116 HIS n 1 117 PRO n 1 118 VAL n 1 119 CYS n 1 120 LEU n 1 121 PRO n 1 122 ASP n 1 123 ARG n 1 124 GLU n 1 125 THR n 1 126 ALA n 1 127 ALA n 1 128 SER n 1 129 LEU n 1 130 LEU n 1 131 GLN n 1 132 ALA n 1 133 GLY n 1 134 TYR n 1 135 LYS n 1 136 GLY n 1 137 ARG n 1 138 VAL n 1 139 THR n 1 140 GLY n 1 141 TRP n 1 142 GLY n 1 143 ASN n 1 144 LEU n 1 145 LYS n 1 146 GLU n 1 147 THR n 1 148 TRP n 1 149 THR n 1 150 ALA n 1 151 ASN n 1 152 VAL n 1 153 GLY n 1 154 LYS n 1 155 GLY n 1 156 GLN n 1 157 PRO n 1 158 SER n 1 159 VAL n 1 160 LEU n 1 161 GLN n 1 162 VAL n 1 163 VAL n 1 164 ASN n 1 165 LEU n 1 166 PRO n 1 167 ILE n 1 168 VAL n 1 169 GLU n 1 170 ARG n 1 171 PRO n 1 172 VAL n 1 173 CYS n 1 174 LYS n 1 175 ASP n 1 176 SER n 1 177 THR n 1 178 ARG n 1 179 ILE n 1 180 ARG n 1 181 ILE n 1 182 THR n 1 183 ASP n 1 184 ASN n 1 185 MET n 1 186 PHE n 1 187 CYS n 1 188 ALA n 1 189 GLY n 1 190 TYR n 1 191 LYS n 1 192 PRO n 1 193 ASP n 1 194 GLU n 1 195 GLY n 1 196 LYS n 1 197 ARG n 1 198 GLY n 1 199 ASP n 1 200 ALA n 1 201 CYS n 1 202 GLU n 1 203 GLY n 1 204 ASP n 1 205 SER n 1 206 GLY n 1 207 GLY n 1 208 PRO n 1 209 PHE n 1 210 VAL n 1 211 MET n 1 212 LYS n 1 213 SER n 1 214 PRO n 1 215 PHE n 1 216 ASN n 1 217 ASN n 1 218 ARG n 1 219 TRP n 1 220 TYR n 1 221 GLN n 1 222 MET n 1 223 GLY n 1 224 ILE n 1 225 VAL n 1 226 SER n 1 227 TRP n 1 228 GLY n 1 229 GLU n 1 230 GLY n 1 231 CYS n 1 232 ASP n 1 233 ARG n 1 234 ASP n 1 235 GLY n 1 236 LYS n 1 237 TYR n 1 238 GLY n 1 239 PHE n 1 240 TYR n 1 241 THR n 1 242 HIS n 1 243 VAL n 1 244 PHE n 1 245 ARG n 1 246 LEU n 1 247 LYS n 1 248 LYS n 1 249 TRP n 1 250 ILE n 1 251 GLN n 1 252 LYS n 1 253 VAL n 1 254 ILE n 1 255 ASP n 1 256 GLN n 1 257 PHE n 1 258 GLY n 1 259 GLU n 2 1 ALA n 2 2 ASP n 2 3 CYS n 2 4 GLY n 2 5 LEU n 2 6 ARG n 2 7 PRO n 2 8 LEU n 2 9 PHE n 2 10 GLU n 2 11 LYS n 2 12 LYS n 2 13 SER n 2 14 LEU n 2 15 GLU n 2 16 ASP n 2 17 LYS n 2 18 THR n 2 19 GLU n 2 20 ARG n 2 21 GLU n 2 22 LEU n 2 23 LEU n 2 24 GLU n 2 25 SER n 2 26 TYR n 2 27 ILE n 2 28 ASP n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample 1 259 Human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 1 28 Human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP THRB_HUMAN P00734 ? 1 ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; 364 2 UNP THRB_HUMAN P00734 ? 2 ADCGLRPLFEKKSLEDKTERELLESYID 334 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6CYM A 1 ? 259 ? P00734 364 ? 622 ? 15 273 2 2 6CYM B 1 ? 28 ? P00734 334 ? 361 ? 1 28 3 1 6CYM C 1 ? 259 ? P00734 364 ? 622 ? 15 273 4 2 6CYM D 1 ? 28 ? P00734 334 ? 361 ? 1 28 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 71F non-polymer . '2-methoxybenzoic acid' ? 'C8 H8 O3' 152.147 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6CYM _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.52 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 51.22 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'BATCH MODE' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;For complex formation, 2 mg human alpha-thrombin (7.1 mg/mL in 50% v/v glycerol) were mixed with 0.5 mM Compound 1 in DMSO and dialyzed overnight into a solution of 20 mM sodium citrate and 1.3 mM Na2SO4 (pH 5.8). After dialysis, another 0.5 mM compound were added and left to incubate at room temperature for 1 h. The protein was centrifuged for 5 min at 4 deg C and 8000x RCF. The pellet, including about 120 uL of buffer, was mixed with 100 uL of a solution containing 50 mM sodium phosphate (pH 7.3), 190 mM sodium chloride, and 0.2 mM Compound 1. The crystal used for data collection was grown from the JCSG+ screen in well A10. The crystal was grown at 20 deg C using a MRC 3-well plate and in a 150 + 150 nL drop with a reservoir of 0.2 M potassium formate and 20% w/v PEG-3350. ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-12-15 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97625 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I03' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97625 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I03 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate 73.56 _reflns.entry_id 6CYM _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.9 _reflns.d_resolution_low 30 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 10936 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 72.1 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 8.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.90 _reflns_shell.d_res_low 2.95 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 6CYM _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 10936 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.00 _refine.ls_d_res_high 2.90 _refine.ls_percent_reflns_obs 72.1 _refine.ls_R_factor_obs 0.180 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.176 _refine.ls_R_factor_R_free 0.254 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.180 _refine.ls_number_reflns_R_free 566 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.915 _refine.correlation_coeff_Fo_to_Fc_free 0.856 _refine.B_iso_mean 69.84 _refine.aniso_B[1][1] -5.97550 _refine.aniso_B[2][2] 8.70760 _refine.aniso_B[3][3] -2.73220 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI 0.521 # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 6CYM _refine_analyze.Luzzati_coordinate_error_obs 0.35 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 4556 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 36 _refine_hist.number_atoms_solvent 22 _refine_hist.number_atoms_total 4614 _refine_hist.d_res_high 2.90 _refine_hist.d_res_low 30.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function t_bond_d 0.010 ? 2.00 4712 'X-RAY DIFFRACTION' HARMONIC t_angle_deg 1.19 ? 2.00 6361 'X-RAY DIFFRACTION' HARMONIC t_dihedral_angle_d ? ? 2.00 1670 'X-RAY DIFFRACTION' SINUSOIDAL t_incorr_chiral_ct ? ? ? ? 'X-RAY DIFFRACTION' ? t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_trig_c_planes ? ? 2.00 112 'X-RAY DIFFRACTION' HARMONIC t_gen_planes ? ? 5.00 671 'X-RAY DIFFRACTION' HARMONIC t_it ? ? 20.00 4712 'X-RAY DIFFRACTION' HARMONIC t_nbd ? ? 5.00 0 'X-RAY DIFFRACTION' SEMIHARMONIC t_omega_torsion 2.89 ? ? ? 'X-RAY DIFFRACTION' ? t_other_torsion 22.45 ? ? ? 'X-RAY DIFFRACTION' ? t_improper_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_chiral_improper_torsion ? ? 5.00 579 'X-RAY DIFFRACTION' SEMIHARMONIC t_sum_occupancies ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_distance ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_ideal_dist_contact ? ? 4.00 5212 'X-RAY DIFFRACTION' SEMIHARMONIC # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.90 _refine_ls_shell.d_res_low 3.18 _refine_ls_shell.number_reflns_R_work 1220 _refine_ls_shell.R_factor_R_work 0.2040 _refine_ls_shell.percent_reflns_obs 36.04 _refine_ls_shell.R_factor_R_free 0.3143 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 5.21 _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.number_reflns_all 1287 _refine_ls_shell.R_factor_all 0.2100 # _struct.entry_id 6CYM _struct.title 'Reversible Covalent Direct Thrombin Inhibitors' _struct.pdbx_descriptor 'Prothrombin (E.C.3.4.21.5)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6CYM _struct_keywords.text 'Hydrolase, blood coagulation, plasma, calcium-binding, glycoprotein, serine protease, Hydrolase-Hydrolase Inhibitor complex' _struct_keywords.pdbx_keywords 'Hydrolase/Hydrolase Inhibitor' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 5 ? H N N 3 ? I N N 5 ? J N N 6 ? K N N 6 ? L N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ALA A 41 ? CYS A 44 ? ALA A 55 CYS A 58 5 ? 4 HELX_P HELX_P2 AA2 PRO A 48 ? ASP A 51 ? PRO A 62 ASP A 65 5 ? 4 HELX_P HELX_P3 AA3 THR A 55 ? ASN A 57 ? THR A 69 ASN A 71 5 ? 3 HELX_P HELX_P4 AA4 ASP A 122 ? LEU A 130 ? ASP A 136 LEU A 144 1 ? 9 HELX_P HELX_P5 AA5 GLU A 169 ? THR A 177 ? GLU A 183 THR A 191 1 ? 9 HELX_P HELX_P6 AA6 LEU A 246 ? PHE A 257 ? LEU A 260 PHE A 271 1 ? 12 HELX_P HELX_P7 AA7 THR B 18 ? TYR B 26 ? THR B 18 TYR B 26 1 ? 9 HELX_P HELX_P8 AA8 ALA C 41 ? CYS C 44 ? ALA C 55 CYS C 58 5 ? 4 HELX_P HELX_P9 AA9 PRO C 48 ? ASP C 51 ? PRO C 62 ASP C 65 5 ? 4 HELX_P HELX_P10 AB1 THR C 55 ? ASN C 57 ? THR C 69 ASN C 71 5 ? 3 HELX_P HELX_P11 AB2 ASP C 122 ? LEU C 130 ? ASP C 136 LEU C 144 1 ? 9 HELX_P HELX_P12 AB3 GLU C 169 ? THR C 177 ? GLU C 183 THR C 191 1 ? 9 HELX_P HELX_P13 AB4 LYS C 191 ? GLY C 195 ? LYS C 205 GLY C 209 5 ? 5 HELX_P HELX_P14 AB5 LEU C 246 ? ASP C 255 ? LEU C 260 ASP C 269 1 ? 10 HELX_P HELX_P15 AB6 THR D 18 ? TYR D 26 ? THR D 18 TYR D 26 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 28 SG ? ? ? 1_555 A CYS 44 SG ? ? A CYS 42 A CYS 58 1_555 ? ? ? ? ? ? ? 2.040 ? ? disulf2 disulf ? ? A CYS 119 SG ? ? ? 1_555 B CYS 3 SG ? ? A CYS 133 B CYS 3 1_555 ? ? ? ? ? ? ? 2.059 ? ? disulf3 disulf ? ? A CYS 173 SG ? ? ? 1_555 A CYS 187 SG ? ? A CYS 187 A CYS 201 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf4 disulf ? ? A CYS 201 SG ? ? ? 1_555 A CYS 231 SG ? ? A CYS 215 A CYS 245 1_555 ? ? ? ? ? ? ? 2.065 ? ? disulf5 disulf ? ? C CYS 28 SG ? ? ? 1_555 C CYS 44 SG ? ? C CYS 42 C CYS 58 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf6 disulf ? ? C CYS 119 SG ? ? ? 1_555 D CYS 3 SG ? ? C CYS 133 D CYS 3 1_555 ? ? ? ? ? ? ? 2.052 ? ? disulf7 disulf ? ? C CYS 173 SG ? ? ? 1_555 C CYS 187 SG ? ? C CYS 187 C CYS 201 1_555 ? ? ? ? ? ? ? 2.050 ? ? disulf8 disulf ? ? C CYS 201 SG ? ? ? 1_555 C CYS 231 SG ? ? C CYS 215 C CYS 245 1_555 ? ? ? ? ? ? ? 2.048 ? ? covale1 covale one ? A ASN 53 ND2 ? ? ? 1_555 F NAG . C1 ? ? A ASN 67 A NAG 301 1_555 ? ? ? ? ? ? ? 1.435 ? N-Glycosylation covale2 covale none ? A SER 205 OG ? ? ? 1_555 E 71F . C8 ? ? A SER 219 A 71F 300 1_555 ? ? ? ? ? ? ? 1.521 ? ? covale3 covale none ? C SER 205 OG ? ? ? 1_555 H 71F . C8 ? ? C SER 219 C 71F 301 1_555 ? ? ? ? ? ? ? 1.559 sing ? metalc1 metalc ? ? A ARG 233 O ? ? ? 1_555 G NA . NA ? ? A ARG 247 A NA 302 1_555 ? ? ? ? ? ? ? 2.888 ? ? metalc2 metalc ? ? A LYS 236 O ? ? ? 1_555 G NA . NA ? ? A LYS 250 A NA 302 1_555 ? ? ? ? ? ? ? 2.733 ? ? metalc3 metalc ? ? G NA . NA ? ? ? 1_555 J HOH . O ? ? A NA 302 A HOH 401 1_555 ? ? ? ? ? ? ? 3.159 ? ? metalc4 metalc ? ? G NA . NA ? ? ? 1_555 J HOH . O ? ? A NA 302 A HOH 405 1_555 ? ? ? ? ? ? ? 2.636 ? ? metalc5 metalc ? ? G NA . NA ? ? ? 1_555 J HOH . O ? ? A NA 302 A HOH 406 1_555 ? ? ? ? ? ? ? 2.935 ? ? metalc6 metalc ? ? C ARG 233 O ? ? ? 1_555 I NA . NA ? ? C ARG 247 C NA 302 1_555 ? ? ? ? ? ? ? 2.437 ? ? metalc7 metalc ? ? C LYS 236 O ? ? ? 1_555 I NA . NA ? ? C LYS 250 C NA 302 1_555 ? ? ? ? ? ? ? 2.578 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 22 A . ? SER 36 A PRO 23 A ? PRO 37 A 1 -4.64 2 SER 22 C . ? SER 36 C PRO 23 C ? PRO 37 C 1 -3.75 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 8 ? AA2 ? 6 ? AA3 ? 2 ? AA4 ? 8 ? AA5 ? 6 ? AA6 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA4 4 5 ? anti-parallel AA4 5 6 ? anti-parallel AA4 6 7 ? anti-parallel AA4 7 8 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA5 4 5 ? anti-parallel AA5 5 6 ? anti-parallel AA6 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 5 ? ASP A 6 ? SER A 19 ASP A 20 AA1 2 GLN A 161 ? VAL A 168 ? GLN A 175 VAL A 182 AA1 3 MET A 185 ? ALA A 188 ? MET A 199 ALA A 202 AA1 4 GLY A 238 ? HIS A 242 ? GLY A 252 HIS A 256 AA1 5 TRP A 219 ? TRP A 227 ? TRP A 233 TRP A 241 AA1 6 PRO A 208 ? LYS A 212 ? PRO A 222 LYS A 226 AA1 7 LYS A 135 ? GLY A 140 ? LYS A 149 GLY A 154 AA1 8 GLN A 161 ? VAL A 168 ? GLN A 175 VAL A 182 AA2 1 LEU A 26 ? SER A 31 ? LEU A 40 SER A 45 AA2 2 GLN A 15 ? ARG A 20 ? GLN A 29 ARG A 34 AA2 3 LEU A 59 ? ILE A 63 ? LEU A 73 ILE A 77 AA2 4 LYS A 77 ? ILE A 86 ? LYS A 91 ILE A 100 AA2 5 ALA A 101 ? LEU A 105 ? ALA A 115 LEU A 119 AA2 6 TRP A 37 ? THR A 40 ? TRP A 51 THR A 54 AA3 1 LEU A 46 ? TYR A 47 ? LEU A 60 TYR A 61 AA3 2 LYS A 52 ? ASN A 53 ? LYS A 66 ASN A 67 AA4 1 SER C 5 ? ASP C 6 ? SER C 19 ASP C 20 AA4 2 GLN C 161 ? VAL C 168 ? GLN C 175 VAL C 182 AA4 3 MET C 185 ? ALA C 188 ? MET C 199 ALA C 202 AA4 4 GLY C 238 ? HIS C 242 ? GLY C 252 HIS C 256 AA4 5 TRP C 219 ? TRP C 227 ? TRP C 233 TRP C 241 AA4 6 PRO C 208 ? LYS C 212 ? PRO C 222 LYS C 226 AA4 7 LYS C 135 ? GLY C 140 ? LYS C 149 GLY C 154 AA4 8 GLN C 161 ? VAL C 168 ? GLN C 175 VAL C 182 AA5 1 GLU C 25 ? SER C 31 ? GLU C 39 SER C 45 AA5 2 GLN C 15 ? ARG C 20 ? GLN C 29 ARG C 34 AA5 3 LEU C 59 ? ILE C 63 ? LEU C 73 ILE C 77 AA5 4 LYS C 77 ? ILE C 86 ? LYS C 91 ILE C 100 AA5 5 ALA C 101 ? LEU C 105 ? ALA C 115 LEU C 119 AA5 6 TRP C 37 ? THR C 40 ? TRP C 51 THR C 54 AA6 1 LEU C 46 ? TYR C 47 ? LEU C 60 TYR C 61 AA6 2 LYS C 52 ? ASN C 53 ? LYS C 66 ASN C 67 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N SER A 5 ? N SER A 19 O VAL A 162 ? O VAL A 176 AA1 2 3 N VAL A 168 ? N VAL A 182 O CYS A 187 ? O CYS A 201 AA1 3 4 N PHE A 186 ? N PHE A 200 O TYR A 240 ? O TYR A 254 AA1 4 5 O PHE A 239 ? O PHE A 253 N TRP A 227 ? N TRP A 241 AA1 5 6 O TYR A 220 ? O TYR A 234 N MET A 211 ? N MET A 225 AA1 6 7 O VAL A 210 ? O VAL A 224 N ARG A 137 ? N ARG A 151 AA1 7 8 N VAL A 138 ? N VAL A 152 O VAL A 163 ? O VAL A 177 AA2 1 2 O LEU A 27 ? O LEU A 41 N LEU A 18 ? N LEU A 32 AA2 2 3 N PHE A 19 ? N PHE A 33 O LEU A 60 ? O LEU A 74 AA2 3 4 N ILE A 63 ? N ILE A 77 O LYS A 77 ? O LYS A 91 AA2 4 5 N GLU A 82 ? N GLU A 96 O LYS A 104 ? O LYS A 118 AA2 5 6 O MET A 103 ? O MET A 117 N VAL A 38 ? N VAL A 52 AA3 1 2 N TYR A 47 ? N TYR A 61 O LYS A 52 ? O LYS A 66 AA4 1 2 N SER C 5 ? N SER C 19 O VAL C 162 ? O VAL C 176 AA4 2 3 N VAL C 168 ? N VAL C 182 O CYS C 187 ? O CYS C 201 AA4 3 4 N PHE C 186 ? N PHE C 200 O TYR C 240 ? O TYR C 254 AA4 4 5 O PHE C 239 ? O PHE C 253 N TRP C 227 ? N TRP C 241 AA4 5 6 O TYR C 220 ? O TYR C 234 N MET C 211 ? N MET C 225 AA4 6 7 O VAL C 210 ? O VAL C 224 N ARG C 137 ? N ARG C 151 AA4 7 8 N VAL C 138 ? N VAL C 152 O VAL C 163 ? O VAL C 177 AA5 1 2 O LEU C 27 ? O LEU C 41 N LEU C 18 ? N LEU C 32 AA5 2 3 N PHE C 19 ? N PHE C 33 O LEU C 60 ? O LEU C 74 AA5 3 4 N ILE C 63 ? N ILE C 77 O LYS C 77 ? O LYS C 91 AA5 4 5 N GLU C 82 ? N GLU C 96 O LYS C 104 ? O LYS C 118 AA5 5 6 O MET C 103 ? O MET C 117 N VAL C 38 ? N VAL C 52 AA6 1 2 N TYR C 47 ? N TYR C 61 O LYS C 52 ? O LYS C 66 # _atom_sites.entry_id 6CYM _atom_sites.fract_transf_matrix[1][1] 0.010909 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010027 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006849 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 15 15 ILE ILE A . n A 1 2 VAL 2 16 16 VAL VAL A . n A 1 3 GLU 3 17 17 GLU GLU A . n A 1 4 GLY 4 18 18 GLY GLY A . n A 1 5 SER 5 19 19 SER SER A . n A 1 6 ASP 6 20 20 ASP ASP A . n A 1 7 ALA 7 21 21 ALA ALA A . n A 1 8 GLU 8 22 22 GLU GLU A . n A 1 9 ILE 9 23 23 ILE ILE A . n A 1 10 GLY 10 24 24 GLY GLY A . n A 1 11 MET 11 25 25 MET MET A . n A 1 12 SER 12 26 26 SER SER A . n A 1 13 PRO 13 27 27 PRO PRO A . n A 1 14 TRP 14 28 28 TRP TRP A . n A 1 15 GLN 15 29 29 GLN GLN A . n A 1 16 VAL 16 30 30 VAL VAL A . n A 1 17 MET 17 31 31 MET MET A . n A 1 18 LEU 18 32 32 LEU LEU A . n A 1 19 PHE 19 33 33 PHE PHE A . n A 1 20 ARG 20 34 34 ARG ARG A . n A 1 21 LYS 21 35 35 LYS LYS A . n A 1 22 SER 22 36 36 SER SER A . n A 1 23 PRO 23 37 37 PRO PRO A . n A 1 24 GLN 24 38 38 GLN GLN A . n A 1 25 GLU 25 39 39 GLU GLU A . n A 1 26 LEU 26 40 40 LEU LEU A . n A 1 27 LEU 27 41 41 LEU LEU A . n A 1 28 CYS 28 42 42 CYS CYS A . n A 1 29 GLY 29 43 43 GLY GLY A . n A 1 30 ALA 30 44 44 ALA ALA A . n A 1 31 SER 31 45 45 SER SER A . n A 1 32 LEU 32 46 46 LEU LEU A . n A 1 33 ILE 33 47 47 ILE ILE A . n A 1 34 SER 34 48 48 SER SER A . n A 1 35 ASP 35 49 49 ASP ASP A . n A 1 36 ARG 36 50 50 ARG ARG A . n A 1 37 TRP 37 51 51 TRP TRP A . n A 1 38 VAL 38 52 52 VAL VAL A . n A 1 39 LEU 39 53 53 LEU LEU A . n A 1 40 THR 40 54 54 THR THR A . n A 1 41 ALA 41 55 55 ALA ALA A . n A 1 42 ALA 42 56 56 ALA ALA A . n A 1 43 HIS 43 57 57 HIS HIS A . n A 1 44 CYS 44 58 58 CYS CYS A . n A 1 45 LEU 45 59 59 LEU LEU A . n A 1 46 LEU 46 60 60 LEU LEU A . n A 1 47 TYR 47 61 61 TYR TYR A . n A 1 48 PRO 48 62 62 PRO PRO A . n A 1 49 PRO 49 63 63 PRO PRO A . n A 1 50 TRP 50 64 64 TRP TRP A . n A 1 51 ASP 51 65 65 ASP ASP A . n A 1 52 LYS 52 66 66 LYS LYS A . n A 1 53 ASN 53 67 67 ASN ASN A . n A 1 54 PHE 54 68 68 PHE PHE A . n A 1 55 THR 55 69 69 THR THR A . n A 1 56 GLU 56 70 70 GLU GLU A . n A 1 57 ASN 57 71 71 ASN ASN A . n A 1 58 ASP 58 72 72 ASP ASP A . n A 1 59 LEU 59 73 73 LEU LEU A . n A 1 60 LEU 60 74 74 LEU LEU A . n A 1 61 VAL 61 75 75 VAL VAL A . n A 1 62 ARG 62 76 76 ARG ARG A . n A 1 63 ILE 63 77 77 ILE ILE A . n A 1 64 GLY 64 78 78 GLY GLY A . n A 1 65 LYS 65 79 79 LYS LYS A . n A 1 66 HIS 66 80 80 HIS HIS A . n A 1 67 SER 67 81 81 SER SER A . n A 1 68 ARG 68 82 82 ARG ARG A . n A 1 69 THR 69 83 83 THR THR A . n A 1 70 ARG 70 84 84 ARG ARG A . n A 1 71 TYR 71 85 85 TYR TYR A . n A 1 72 GLU 72 86 86 GLU GLU A . n A 1 73 ARG 73 87 87 ARG ARG A . n A 1 74 ASN 74 88 88 ASN ASN A . n A 1 75 ILE 75 89 89 ILE ILE A . n A 1 76 GLU 76 90 90 GLU GLU A . n A 1 77 LYS 77 91 91 LYS LYS A . n A 1 78 ILE 78 92 92 ILE ILE A . n A 1 79 SER 79 93 93 SER SER A . n A 1 80 MET 80 94 94 MET MET A . n A 1 81 LEU 81 95 95 LEU LEU A . n A 1 82 GLU 82 96 96 GLU GLU A . n A 1 83 LYS 83 97 97 LYS LYS A . n A 1 84 ILE 84 98 98 ILE ILE A . n A 1 85 TYR 85 99 99 TYR TYR A . n A 1 86 ILE 86 100 100 ILE ILE A . n A 1 87 HIS 87 101 101 HIS HIS A . n A 1 88 PRO 88 102 102 PRO PRO A . n A 1 89 ARG 89 103 103 ARG ARG A . n A 1 90 TYR 90 104 104 TYR TYR A . n A 1 91 ASN 91 105 105 ASN ASN A . n A 1 92 TRP 92 106 106 TRP TRP A . n A 1 93 ARG 93 107 107 ARG ARG A . n A 1 94 GLU 94 108 108 GLU GLU A . n A 1 95 ASN 95 109 109 ASN ASN A . n A 1 96 LEU 96 110 110 LEU LEU A . n A 1 97 ASP 97 111 111 ASP ASP A . n A 1 98 ARG 98 112 112 ARG ARG A . n A 1 99 ASP 99 113 113 ASP ASP A . n A 1 100 ILE 100 114 114 ILE ILE A . n A 1 101 ALA 101 115 115 ALA ALA A . n A 1 102 LEU 102 116 116 LEU LEU A . n A 1 103 MET 103 117 117 MET MET A . n A 1 104 LYS 104 118 118 LYS LYS A . n A 1 105 LEU 105 119 119 LEU LEU A . n A 1 106 LYS 106 120 120 LYS LYS A . n A 1 107 LYS 107 121 121 LYS LYS A . n A 1 108 PRO 108 122 122 PRO PRO A . n A 1 109 VAL 109 123 123 VAL VAL A . n A 1 110 ALA 110 124 124 ALA ALA A . n A 1 111 PHE 111 125 125 PHE PHE A . n A 1 112 SER 112 126 126 SER SER A . n A 1 113 ASP 113 127 127 ASP ASP A . n A 1 114 TYR 114 128 128 TYR TYR A . n A 1 115 ILE 115 129 129 ILE ILE A . n A 1 116 HIS 116 130 130 HIS HIS A . n A 1 117 PRO 117 131 131 PRO PRO A . n A 1 118 VAL 118 132 132 VAL VAL A . n A 1 119 CYS 119 133 133 CYS CYS A . n A 1 120 LEU 120 134 134 LEU LEU A . n A 1 121 PRO 121 135 135 PRO PRO A . n A 1 122 ASP 122 136 136 ASP ASP A . n A 1 123 ARG 123 137 137 ARG ARG A . n A 1 124 GLU 124 138 138 GLU GLU A . n A 1 125 THR 125 139 139 THR THR A . n A 1 126 ALA 126 140 140 ALA ALA A . n A 1 127 ALA 127 141 141 ALA ALA A . n A 1 128 SER 128 142 142 SER SER A . n A 1 129 LEU 129 143 143 LEU LEU A . n A 1 130 LEU 130 144 144 LEU LEU A . n A 1 131 GLN 131 145 145 GLN GLN A . n A 1 132 ALA 132 146 146 ALA ALA A . n A 1 133 GLY 133 147 147 GLY GLY A . n A 1 134 TYR 134 148 148 TYR TYR A . n A 1 135 LYS 135 149 149 LYS LYS A . n A 1 136 GLY 136 150 150 GLY GLY A . n A 1 137 ARG 137 151 151 ARG ARG A . n A 1 138 VAL 138 152 152 VAL VAL A . n A 1 139 THR 139 153 153 THR THR A . n A 1 140 GLY 140 154 154 GLY GLY A . n A 1 141 TRP 141 155 155 TRP TRP A . n A 1 142 GLY 142 156 156 GLY GLY A . n A 1 143 ASN 143 157 157 ASN ASN A . n A 1 144 LEU 144 158 158 LEU LEU A . n A 1 145 LYS 145 159 159 LYS LYS A . n A 1 146 GLU 146 160 160 GLU GLU A . n A 1 147 THR 147 161 161 THR THR A . n A 1 148 TRP 148 162 ? ? ? A . n A 1 149 THR 149 163 ? ? ? A . n A 1 150 ALA 150 164 ? ? ? A . n A 1 151 ASN 151 165 ? ? ? A . n A 1 152 VAL 152 166 ? ? ? A . n A 1 153 GLY 153 167 ? ? ? A . n A 1 154 LYS 154 168 ? ? ? A . n A 1 155 GLY 155 169 169 GLY GLY A . n A 1 156 GLN 156 170 170 GLN GLN A . n A 1 157 PRO 157 171 171 PRO PRO A . n A 1 158 SER 158 172 172 SER SER A . n A 1 159 VAL 159 173 173 VAL VAL A . n A 1 160 LEU 160 174 174 LEU LEU A . n A 1 161 GLN 161 175 175 GLN GLN A . n A 1 162 VAL 162 176 176 VAL VAL A . n A 1 163 VAL 163 177 177 VAL VAL A . n A 1 164 ASN 164 178 178 ASN ASN A . n A 1 165 LEU 165 179 179 LEU LEU A . n A 1 166 PRO 166 180 180 PRO PRO A . n A 1 167 ILE 167 181 181 ILE ILE A . n A 1 168 VAL 168 182 182 VAL VAL A . n A 1 169 GLU 169 183 183 GLU GLU A . n A 1 170 ARG 170 184 184 ARG ARG A . n A 1 171 PRO 171 185 185 PRO PRO A . n A 1 172 VAL 172 186 186 VAL VAL A . n A 1 173 CYS 173 187 187 CYS CYS A . n A 1 174 LYS 174 188 188 LYS LYS A . n A 1 175 ASP 175 189 189 ASP ASP A . n A 1 176 SER 176 190 190 SER SER A . n A 1 177 THR 177 191 191 THR THR A . n A 1 178 ARG 178 192 192 ARG ARG A . n A 1 179 ILE 179 193 193 ILE ILE A . n A 1 180 ARG 180 194 194 ARG ARG A . n A 1 181 ILE 181 195 195 ILE ILE A . n A 1 182 THR 182 196 196 THR THR A . n A 1 183 ASP 183 197 197 ASP ASP A . n A 1 184 ASN 184 198 198 ASN ASN A . n A 1 185 MET 185 199 199 MET MET A . n A 1 186 PHE 186 200 200 PHE PHE A . n A 1 187 CYS 187 201 201 CYS CYS A . n A 1 188 ALA 188 202 202 ALA ALA A . n A 1 189 GLY 189 203 203 GLY GLY A . n A 1 190 TYR 190 204 204 TYR TYR A . n A 1 191 LYS 191 205 205 LYS LYS A . n A 1 192 PRO 192 206 206 PRO PRO A . n A 1 193 ASP 193 207 207 ASP ASP A . n A 1 194 GLU 194 208 208 GLU GLU A . n A 1 195 GLY 195 209 209 GLY GLY A . n A 1 196 LYS 196 210 210 LYS LYS A . n A 1 197 ARG 197 211 211 ARG ARG A . n A 1 198 GLY 198 212 212 GLY GLY A . n A 1 199 ASP 199 213 213 ASP ASP A . n A 1 200 ALA 200 214 214 ALA ALA A . n A 1 201 CYS 201 215 215 CYS CYS A . n A 1 202 GLU 202 216 216 GLU GLU A . n A 1 203 GLY 203 217 217 GLY GLY A . n A 1 204 ASP 204 218 218 ASP ASP A . n A 1 205 SER 205 219 219 SER SER A . n A 1 206 GLY 206 220 220 GLY GLY A . n A 1 207 GLY 207 221 221 GLY GLY A . n A 1 208 PRO 208 222 222 PRO PRO A . n A 1 209 PHE 209 223 223 PHE PHE A . n A 1 210 VAL 210 224 224 VAL VAL A . n A 1 211 MET 211 225 225 MET MET A . n A 1 212 LYS 212 226 226 LYS LYS A . n A 1 213 SER 213 227 227 SER SER A . n A 1 214 PRO 214 228 228 PRO PRO A . n A 1 215 PHE 215 229 229 PHE PHE A . n A 1 216 ASN 216 230 230 ASN ASN A . n A 1 217 ASN 217 231 231 ASN ASN A . n A 1 218 ARG 218 232 232 ARG ARG A . n A 1 219 TRP 219 233 233 TRP TRP A . n A 1 220 TYR 220 234 234 TYR TYR A . n A 1 221 GLN 221 235 235 GLN GLN A . n A 1 222 MET 222 236 236 MET MET A . n A 1 223 GLY 223 237 237 GLY GLY A . n A 1 224 ILE 224 238 238 ILE ILE A . n A 1 225 VAL 225 239 239 VAL VAL A . n A 1 226 SER 226 240 240 SER SER A . n A 1 227 TRP 227 241 241 TRP TRP A . n A 1 228 GLY 228 242 242 GLY GLY A . n A 1 229 GLU 229 243 243 GLU GLU A . n A 1 230 GLY 230 244 244 GLY GLY A . n A 1 231 CYS 231 245 245 CYS CYS A . n A 1 232 ASP 232 246 246 ASP ASP A . n A 1 233 ARG 233 247 247 ARG ARG A . n A 1 234 ASP 234 248 248 ASP ASP A . n A 1 235 GLY 235 249 249 GLY GLY A . n A 1 236 LYS 236 250 250 LYS LYS A . n A 1 237 TYR 237 251 251 TYR TYR A . n A 1 238 GLY 238 252 252 GLY GLY A . n A 1 239 PHE 239 253 253 PHE PHE A . n A 1 240 TYR 240 254 254 TYR TYR A . n A 1 241 THR 241 255 255 THR THR A . n A 1 242 HIS 242 256 256 HIS HIS A . n A 1 243 VAL 243 257 257 VAL VAL A . n A 1 244 PHE 244 258 258 PHE PHE A . n A 1 245 ARG 245 259 259 ARG ARG A . n A 1 246 LEU 246 260 260 LEU LEU A . n A 1 247 LYS 247 261 261 LYS LYS A . n A 1 248 LYS 248 262 262 LYS LYS A . n A 1 249 TRP 249 263 263 TRP TRP A . n A 1 250 ILE 250 264 264 ILE ILE A . n A 1 251 GLN 251 265 265 GLN GLN A . n A 1 252 LYS 252 266 266 LYS LYS A . n A 1 253 VAL 253 267 267 VAL VAL A . n A 1 254 ILE 254 268 268 ILE ILE A . n A 1 255 ASP 255 269 269 ASP ASP A . n A 1 256 GLN 256 270 270 GLN GLN A . n A 1 257 PHE 257 271 271 PHE PHE A . n A 1 258 GLY 258 272 ? ? ? A . n A 1 259 GLU 259 273 ? ? ? A . n B 2 1 ALA 1 1 1 ALA ALA B . n B 2 2 ASP 2 2 2 ASP ASP B . n B 2 3 CYS 3 3 3 CYS CYS B . n B 2 4 GLY 4 4 4 GLY GLY B . n B 2 5 LEU 5 5 5 LEU LEU B . n B 2 6 ARG 6 6 6 ARG ARG B . n B 2 7 PRO 7 7 7 PRO PRO B . n B 2 8 LEU 8 8 8 LEU LEU B . n B 2 9 PHE 9 9 9 PHE PHE B . n B 2 10 GLU 10 10 10 GLU GLU B . n B 2 11 LYS 11 11 11 LYS LYS B . n B 2 12 LYS 12 12 12 LYS LYS B . n B 2 13 SER 13 13 13 SER SER B . n B 2 14 LEU 14 14 14 LEU LEU B . n B 2 15 GLU 15 15 15 GLU GLU B . n B 2 16 ASP 16 16 16 ASP ASP B . n B 2 17 LYS 17 17 17 LYS LYS B . n B 2 18 THR 18 18 18 THR THR B . n B 2 19 GLU 19 19 19 GLU GLU B . n B 2 20 ARG 20 20 20 ARG ARG B . n B 2 21 GLU 21 21 21 GLU GLU B . n B 2 22 LEU 22 22 22 LEU LEU B . n B 2 23 LEU 23 23 23 LEU LEU B . n B 2 24 GLU 24 24 24 GLU GLU B . n B 2 25 SER 25 25 25 SER SER B . n B 2 26 TYR 26 26 26 TYR TYR B . n B 2 27 ILE 27 27 27 ILE ILE B . n B 2 28 ASP 28 28 ? ? ? B . n C 1 1 ILE 1 15 15 ILE ILE C . n C 1 2 VAL 2 16 16 VAL VAL C . n C 1 3 GLU 3 17 17 GLU GLU C . n C 1 4 GLY 4 18 18 GLY GLY C . n C 1 5 SER 5 19 19 SER SER C . n C 1 6 ASP 6 20 20 ASP ASP C . n C 1 7 ALA 7 21 21 ALA ALA C . n C 1 8 GLU 8 22 22 GLU GLU C . n C 1 9 ILE 9 23 23 ILE ILE C . n C 1 10 GLY 10 24 24 GLY GLY C . n C 1 11 MET 11 25 25 MET MET C . n C 1 12 SER 12 26 26 SER SER C . n C 1 13 PRO 13 27 27 PRO PRO C . n C 1 14 TRP 14 28 28 TRP TRP C . n C 1 15 GLN 15 29 29 GLN GLN C . n C 1 16 VAL 16 30 30 VAL VAL C . n C 1 17 MET 17 31 31 MET MET C . n C 1 18 LEU 18 32 32 LEU LEU C . n C 1 19 PHE 19 33 33 PHE PHE C . n C 1 20 ARG 20 34 34 ARG ARG C . n C 1 21 LYS 21 35 35 LYS LYS C . n C 1 22 SER 22 36 36 SER SER C . n C 1 23 PRO 23 37 37 PRO PRO C . n C 1 24 GLN 24 38 38 GLN GLN C . n C 1 25 GLU 25 39 39 GLU GLU C . n C 1 26 LEU 26 40 40 LEU LEU C . n C 1 27 LEU 27 41 41 LEU LEU C . n C 1 28 CYS 28 42 42 CYS CYS C . n C 1 29 GLY 29 43 43 GLY GLY C . n C 1 30 ALA 30 44 44 ALA ALA C . n C 1 31 SER 31 45 45 SER SER C . n C 1 32 LEU 32 46 46 LEU LEU C . n C 1 33 ILE 33 47 47 ILE ILE C . n C 1 34 SER 34 48 48 SER SER C . n C 1 35 ASP 35 49 49 ASP ASP C . n C 1 36 ARG 36 50 50 ARG ARG C . n C 1 37 TRP 37 51 51 TRP TRP C . n C 1 38 VAL 38 52 52 VAL VAL C . n C 1 39 LEU 39 53 53 LEU LEU C . n C 1 40 THR 40 54 54 THR THR C . n C 1 41 ALA 41 55 55 ALA ALA C . n C 1 42 ALA 42 56 56 ALA ALA C . n C 1 43 HIS 43 57 57 HIS HIS C . n C 1 44 CYS 44 58 58 CYS CYS C . n C 1 45 LEU 45 59 59 LEU LEU C . n C 1 46 LEU 46 60 60 LEU LEU C . n C 1 47 TYR 47 61 61 TYR TYR C . n C 1 48 PRO 48 62 62 PRO PRO C . n C 1 49 PRO 49 63 63 PRO PRO C . n C 1 50 TRP 50 64 64 TRP TRP C . n C 1 51 ASP 51 65 65 ASP ASP C . n C 1 52 LYS 52 66 66 LYS LYS C . n C 1 53 ASN 53 67 67 ASN ASN C . n C 1 54 PHE 54 68 68 PHE PHE C . n C 1 55 THR 55 69 69 THR THR C . n C 1 56 GLU 56 70 70 GLU GLU C . n C 1 57 ASN 57 71 71 ASN ASN C . n C 1 58 ASP 58 72 72 ASP ASP C . n C 1 59 LEU 59 73 73 LEU LEU C . n C 1 60 LEU 60 74 74 LEU LEU C . n C 1 61 VAL 61 75 75 VAL VAL C . n C 1 62 ARG 62 76 76 ARG ARG C . n C 1 63 ILE 63 77 77 ILE ILE C . n C 1 64 GLY 64 78 78 GLY GLY C . n C 1 65 LYS 65 79 79 LYS LYS C . n C 1 66 HIS 66 80 80 HIS HIS C . n C 1 67 SER 67 81 81 SER SER C . n C 1 68 ARG 68 82 82 ARG ARG C . n C 1 69 THR 69 83 83 THR THR C . n C 1 70 ARG 70 84 84 ARG ARG C . n C 1 71 TYR 71 85 85 TYR TYR C . n C 1 72 GLU 72 86 86 GLU GLU C . n C 1 73 ARG 73 87 87 ARG ARG C . n C 1 74 ASN 74 88 88 ASN ASN C . n C 1 75 ILE 75 89 89 ILE ILE C . n C 1 76 GLU 76 90 90 GLU GLU C . n C 1 77 LYS 77 91 91 LYS LYS C . n C 1 78 ILE 78 92 92 ILE ILE C . n C 1 79 SER 79 93 93 SER SER C . n C 1 80 MET 80 94 94 MET MET C . n C 1 81 LEU 81 95 95 LEU LEU C . n C 1 82 GLU 82 96 96 GLU GLU C . n C 1 83 LYS 83 97 97 LYS LYS C . n C 1 84 ILE 84 98 98 ILE ILE C . n C 1 85 TYR 85 99 99 TYR TYR C . n C 1 86 ILE 86 100 100 ILE ILE C . n C 1 87 HIS 87 101 101 HIS HIS C . n C 1 88 PRO 88 102 102 PRO PRO C . n C 1 89 ARG 89 103 103 ARG ARG C . n C 1 90 TYR 90 104 104 TYR TYR C . n C 1 91 ASN 91 105 105 ASN ASN C . n C 1 92 TRP 92 106 106 TRP TRP C . n C 1 93 ARG 93 107 107 ARG ARG C . n C 1 94 GLU 94 108 108 GLU GLU C . n C 1 95 ASN 95 109 109 ASN ASN C . n C 1 96 LEU 96 110 110 LEU LEU C . n C 1 97 ASP 97 111 111 ASP ASP C . n C 1 98 ARG 98 112 112 ARG ARG C . n C 1 99 ASP 99 113 113 ASP ASP C . n C 1 100 ILE 100 114 114 ILE ILE C . n C 1 101 ALA 101 115 115 ALA ALA C . n C 1 102 LEU 102 116 116 LEU LEU C . n C 1 103 MET 103 117 117 MET MET C . n C 1 104 LYS 104 118 118 LYS LYS C . n C 1 105 LEU 105 119 119 LEU LEU C . n C 1 106 LYS 106 120 120 LYS LYS C . n C 1 107 LYS 107 121 121 LYS LYS C . n C 1 108 PRO 108 122 122 PRO PRO C . n C 1 109 VAL 109 123 123 VAL VAL C . n C 1 110 ALA 110 124 124 ALA ALA C . n C 1 111 PHE 111 125 125 PHE PHE C . n C 1 112 SER 112 126 126 SER SER C . n C 1 113 ASP 113 127 127 ASP ASP C . n C 1 114 TYR 114 128 128 TYR TYR C . n C 1 115 ILE 115 129 129 ILE ILE C . n C 1 116 HIS 116 130 130 HIS HIS C . n C 1 117 PRO 117 131 131 PRO PRO C . n C 1 118 VAL 118 132 132 VAL VAL C . n C 1 119 CYS 119 133 133 CYS CYS C . n C 1 120 LEU 120 134 134 LEU LEU C . n C 1 121 PRO 121 135 135 PRO PRO C . n C 1 122 ASP 122 136 136 ASP ASP C . n C 1 123 ARG 123 137 137 ARG ARG C . n C 1 124 GLU 124 138 138 GLU GLU C . n C 1 125 THR 125 139 139 THR THR C . n C 1 126 ALA 126 140 140 ALA ALA C . n C 1 127 ALA 127 141 141 ALA ALA C . n C 1 128 SER 128 142 142 SER SER C . n C 1 129 LEU 129 143 143 LEU LEU C . n C 1 130 LEU 130 144 144 LEU LEU C . n C 1 131 GLN 131 145 145 GLN GLN C . n C 1 132 ALA 132 146 146 ALA ALA C . n C 1 133 GLY 133 147 147 GLY GLY C . n C 1 134 TYR 134 148 148 TYR TYR C . n C 1 135 LYS 135 149 149 LYS LYS C . n C 1 136 GLY 136 150 150 GLY GLY C . n C 1 137 ARG 137 151 151 ARG ARG C . n C 1 138 VAL 138 152 152 VAL VAL C . n C 1 139 THR 139 153 153 THR THR C . n C 1 140 GLY 140 154 154 GLY GLY C . n C 1 141 TRP 141 155 155 TRP TRP C . n C 1 142 GLY 142 156 156 GLY GLY C . n C 1 143 ASN 143 157 157 ASN ASN C . n C 1 144 LEU 144 158 158 LEU LEU C . n C 1 145 LYS 145 159 159 LYS LYS C . n C 1 146 GLU 146 160 160 GLU GLU C . n C 1 147 THR 147 161 161 THR THR C . n C 1 148 TRP 148 162 162 TRP TRP C . n C 1 149 THR 149 163 163 THR THR C . n C 1 150 ALA 150 164 164 ALA ALA C . n C 1 151 ASN 151 165 165 ASN ASN C . n C 1 152 VAL 152 166 166 VAL VAL C . n C 1 153 GLY 153 167 167 GLY GLY C . n C 1 154 LYS 154 168 168 LYS LYS C . n C 1 155 GLY 155 169 169 GLY GLY C . n C 1 156 GLN 156 170 170 GLN GLN C . n C 1 157 PRO 157 171 171 PRO PRO C . n C 1 158 SER 158 172 172 SER SER C . n C 1 159 VAL 159 173 173 VAL VAL C . n C 1 160 LEU 160 174 174 LEU LEU C . n C 1 161 GLN 161 175 175 GLN GLN C . n C 1 162 VAL 162 176 176 VAL VAL C . n C 1 163 VAL 163 177 177 VAL VAL C . n C 1 164 ASN 164 178 178 ASN ASN C . n C 1 165 LEU 165 179 179 LEU LEU C . n C 1 166 PRO 166 180 180 PRO PRO C . n C 1 167 ILE 167 181 181 ILE ILE C . n C 1 168 VAL 168 182 182 VAL VAL C . n C 1 169 GLU 169 183 183 GLU GLU C . n C 1 170 ARG 170 184 184 ARG ARG C . n C 1 171 PRO 171 185 185 PRO PRO C . n C 1 172 VAL 172 186 186 VAL VAL C . n C 1 173 CYS 173 187 187 CYS CYS C . n C 1 174 LYS 174 188 188 LYS LYS C . n C 1 175 ASP 175 189 189 ASP ASP C . n C 1 176 SER 176 190 190 SER SER C . n C 1 177 THR 177 191 191 THR THR C . n C 1 178 ARG 178 192 192 ARG ARG C . n C 1 179 ILE 179 193 193 ILE ILE C . n C 1 180 ARG 180 194 194 ARG ARG C . n C 1 181 ILE 181 195 195 ILE ILE C . n C 1 182 THR 182 196 196 THR THR C . n C 1 183 ASP 183 197 197 ASP ASP C . n C 1 184 ASN 184 198 198 ASN ASN C . n C 1 185 MET 185 199 199 MET MET C . n C 1 186 PHE 186 200 200 PHE PHE C . n C 1 187 CYS 187 201 201 CYS CYS C . n C 1 188 ALA 188 202 202 ALA ALA C . n C 1 189 GLY 189 203 203 GLY GLY C . n C 1 190 TYR 190 204 204 TYR TYR C . n C 1 191 LYS 191 205 205 LYS LYS C . n C 1 192 PRO 192 206 206 PRO PRO C . n C 1 193 ASP 193 207 207 ASP ASP C . n C 1 194 GLU 194 208 208 GLU GLU C . n C 1 195 GLY 195 209 209 GLY GLY C . n C 1 196 LYS 196 210 210 LYS LYS C . n C 1 197 ARG 197 211 211 ARG ARG C . n C 1 198 GLY 198 212 212 GLY GLY C . n C 1 199 ASP 199 213 213 ASP ASP C . n C 1 200 ALA 200 214 214 ALA ALA C . n C 1 201 CYS 201 215 215 CYS CYS C . n C 1 202 GLU 202 216 216 GLU GLU C . n C 1 203 GLY 203 217 217 GLY GLY C . n C 1 204 ASP 204 218 218 ASP ASP C . n C 1 205 SER 205 219 219 SER SER C . n C 1 206 GLY 206 220 220 GLY GLY C . n C 1 207 GLY 207 221 221 GLY GLY C . n C 1 208 PRO 208 222 222 PRO PRO C . n C 1 209 PHE 209 223 223 PHE PHE C . n C 1 210 VAL 210 224 224 VAL VAL C . n C 1 211 MET 211 225 225 MET MET C . n C 1 212 LYS 212 226 226 LYS LYS C . n C 1 213 SER 213 227 227 SER SER C . n C 1 214 PRO 214 228 228 PRO PRO C . n C 1 215 PHE 215 229 229 PHE PHE C . n C 1 216 ASN 216 230 230 ASN ASN C . n C 1 217 ASN 217 231 231 ASN ASN C . n C 1 218 ARG 218 232 232 ARG ARG C . n C 1 219 TRP 219 233 233 TRP TRP C . n C 1 220 TYR 220 234 234 TYR TYR C . n C 1 221 GLN 221 235 235 GLN GLN C . n C 1 222 MET 222 236 236 MET MET C . n C 1 223 GLY 223 237 237 GLY GLY C . n C 1 224 ILE 224 238 238 ILE ILE C . n C 1 225 VAL 225 239 239 VAL VAL C . n C 1 226 SER 226 240 240 SER SER C . n C 1 227 TRP 227 241 241 TRP TRP C . n C 1 228 GLY 228 242 242 GLY GLY C . n C 1 229 GLU 229 243 243 GLU GLU C . n C 1 230 GLY 230 244 244 GLY GLY C . n C 1 231 CYS 231 245 245 CYS CYS C . n C 1 232 ASP 232 246 246 ASP ASP C . n C 1 233 ARG 233 247 247 ARG ARG C . n C 1 234 ASP 234 248 248 ASP ASP C . n C 1 235 GLY 235 249 249 GLY GLY C . n C 1 236 LYS 236 250 250 LYS LYS C . n C 1 237 TYR 237 251 251 TYR TYR C . n C 1 238 GLY 238 252 252 GLY GLY C . n C 1 239 PHE 239 253 253 PHE PHE C . n C 1 240 TYR 240 254 254 TYR TYR C . n C 1 241 THR 241 255 255 THR THR C . n C 1 242 HIS 242 256 256 HIS HIS C . n C 1 243 VAL 243 257 257 VAL VAL C . n C 1 244 PHE 244 258 258 PHE PHE C . n C 1 245 ARG 245 259 259 ARG ARG C . n C 1 246 LEU 246 260 260 LEU LEU C . n C 1 247 LYS 247 261 261 LYS LYS C . n C 1 248 LYS 248 262 262 LYS LYS C . n C 1 249 TRP 249 263 263 TRP TRP C . n C 1 250 ILE 250 264 264 ILE ILE C . n C 1 251 GLN 251 265 265 GLN GLN C . n C 1 252 LYS 252 266 266 LYS LYS C . n C 1 253 VAL 253 267 267 VAL VAL C . n C 1 254 ILE 254 268 268 ILE ILE C . n C 1 255 ASP 255 269 269 ASP ASP C . n C 1 256 GLN 256 270 270 GLN GLN C . n C 1 257 PHE 257 271 271 PHE PHE C . n C 1 258 GLY 258 272 ? ? ? C . n C 1 259 GLU 259 273 ? ? ? C . n D 2 1 ALA 1 1 1 ALA ALA D . n D 2 2 ASP 2 2 2 ASP ASP D . n D 2 3 CYS 3 3 3 CYS CYS D . n D 2 4 GLY 4 4 4 GLY GLY D . n D 2 5 LEU 5 5 5 LEU LEU D . n D 2 6 ARG 6 6 6 ARG ARG D . n D 2 7 PRO 7 7 7 PRO PRO D . n D 2 8 LEU 8 8 8 LEU LEU D . n D 2 9 PHE 9 9 9 PHE PHE D . n D 2 10 GLU 10 10 10 GLU GLU D . n D 2 11 LYS 11 11 11 LYS LYS D . n D 2 12 LYS 12 12 12 LYS LYS D . n D 2 13 SER 13 13 13 SER SER D . n D 2 14 LEU 14 14 14 LEU LEU D . n D 2 15 GLU 15 15 15 GLU GLU D . n D 2 16 ASP 16 16 16 ASP ASP D . n D 2 17 LYS 17 17 17 LYS LYS D . n D 2 18 THR 18 18 18 THR THR D . n D 2 19 GLU 19 19 19 GLU GLU D . n D 2 20 ARG 20 20 20 ARG ARG D . n D 2 21 GLU 21 21 21 GLU GLU D . n D 2 22 LEU 22 22 22 LEU LEU D . n D 2 23 LEU 23 23 23 LEU LEU D . n D 2 24 GLU 24 24 24 GLU GLU D . n D 2 25 SER 25 25 25 SER SER D . n D 2 26 TYR 26 26 26 TYR TYR D . n D 2 27 ILE 27 27 27 ILE ILE D . n D 2 28 ASP 28 28 28 ASP ASP D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 71F 1 300 300 71F MBA A . F 4 NAG 1 301 301 NAG NAG A . G 5 NA 1 302 302 NA NA A . H 3 71F 1 301 300 71F MBA C . I 5 NA 1 302 302 NA NA C . J 6 HOH 1 401 21 HOH HOH A . J 6 HOH 2 402 22 HOH HOH A . J 6 HOH 3 403 8 HOH HOH A . J 6 HOH 4 404 1 HOH HOH A . J 6 HOH 5 405 25 HOH HOH A . J 6 HOH 6 406 20 HOH HOH A . J 6 HOH 7 407 7 HOH HOH A . J 6 HOH 8 408 16 HOH HOH A . J 6 HOH 9 409 9 HOH HOH A . J 6 HOH 10 410 24 HOH HOH A . J 6 HOH 11 411 19 HOH HOH A . J 6 HOH 12 412 26 HOH HOH A . J 6 HOH 13 413 23 HOH HOH A . J 6 HOH 14 414 11 HOH HOH A . J 6 HOH 15 415 2 HOH HOH A . K 6 HOH 1 401 17 HOH HOH C . K 6 HOH 2 402 18 HOH HOH C . K 6 HOH 3 403 28 HOH HOH C . K 6 HOH 4 404 14 HOH HOH C . K 6 HOH 5 405 10 HOH HOH C . K 6 HOH 6 406 27 HOH HOH C . L 6 HOH 1 101 12 HOH HOH D . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E,F,G,J 2 1 C,D,H,I,K,L # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2500 ? 1 MORE -19 ? 1 'SSA (A^2)' 12640 ? 2 'ABSA (A^2)' 2330 ? 2 MORE -21 ? 2 'SSA (A^2)' 12910 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A ARG 233 ? A ARG 247 ? 1_555 NA ? G NA . ? A NA 302 ? 1_555 O ? A LYS 236 ? A LYS 250 ? 1_555 67.9 ? 2 O ? A ARG 233 ? A ARG 247 ? 1_555 NA ? G NA . ? A NA 302 ? 1_555 O ? J HOH . ? A HOH 401 ? 1_555 144.2 ? 3 O ? A LYS 236 ? A LYS 250 ? 1_555 NA ? G NA . ? A NA 302 ? 1_555 O ? J HOH . ? A HOH 401 ? 1_555 95.3 ? 4 O ? A ARG 233 ? A ARG 247 ? 1_555 NA ? G NA . ? A NA 302 ? 1_555 O ? J HOH . ? A HOH 405 ? 1_555 84.8 ? 5 O ? A LYS 236 ? A LYS 250 ? 1_555 NA ? G NA . ? A NA 302 ? 1_555 O ? J HOH . ? A HOH 405 ? 1_555 64.9 ? 6 O ? J HOH . ? A HOH 401 ? 1_555 NA ? G NA . ? A NA 302 ? 1_555 O ? J HOH . ? A HOH 405 ? 1_555 59.4 ? 7 O ? A ARG 233 ? A ARG 247 ? 1_555 NA ? G NA . ? A NA 302 ? 1_555 O ? J HOH . ? A HOH 406 ? 1_555 87.0 ? 8 O ? A LYS 236 ? A LYS 250 ? 1_555 NA ? G NA . ? A NA 302 ? 1_555 O ? J HOH . ? A HOH 406 ? 1_555 116.5 ? 9 O ? J HOH . ? A HOH 401 ? 1_555 NA ? G NA . ? A NA 302 ? 1_555 O ? J HOH . ? A HOH 406 ? 1_555 128.5 ? 10 O ? J HOH . ? A HOH 405 ? 1_555 NA ? G NA . ? A NA 302 ? 1_555 O ? J HOH . ? A HOH 406 ? 1_555 170.3 ? 11 O ? C ARG 233 ? C ARG 247 ? 1_555 NA ? I NA . ? C NA 302 ? 1_555 O ? C LYS 236 ? C LYS 250 ? 1_555 78.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-05-09 2 'Structure model' 1 1 2018-08-15 3 'Structure model' 1 2 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp 4 3 'Structure model' entity 5 3 'Structure model' pdbx_chem_comp_identifier 6 3 'Structure model' pdbx_entity_nonpoly 7 3 'Structure model' pdbx_struct_conn_angle 8 3 'Structure model' struct_conn 9 3 'Structure model' struct_site 10 3 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 2 'Structure model' '_citation_author.identifier_ORCID' 13 3 'Structure model' '_chem_comp.name' 14 3 'Structure model' '_chem_comp.type' 15 3 'Structure model' '_entity.pdbx_description' 16 3 'Structure model' '_pdbx_entity_nonpoly.name' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.value' 20 3 'Structure model' '_struct_conn.conn_type_id' 21 3 'Structure model' '_struct_conn.id' 22 3 'Structure model' '_struct_conn.pdbx_dist_value' 23 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 24 3 'Structure model' '_struct_conn.pdbx_role' 25 3 'Structure model' '_struct_conn.pdbx_value_order' 26 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 27 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 28 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 29 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 30 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 31 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 32 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 33 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 34 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 35 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 36 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 37 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 38 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 12.2051 38.7551 14.9259 -0.1993 0.1434 0.0120 -0.2387 -0.0297 -0.0702 1.2852 0.4815 5.1777 1.2676 2.2618 -1.0776 0.0041 0.0147 0.1549 0.2061 0.1386 -0.5442 -0.5320 0.2907 -0.1427 'X-RAY DIFFRACTION' 2 ? refined 2.3465 28.4197 2.2338 -0.3465 0.0663 -0.2542 -0.0174 0.0354 -0.0417 3.5580 2.0674 4.0502 -0.7493 0.0829 0.4207 0.1166 0.5591 0.1481 -0.1790 0.0110 -0.1453 -0.0588 0.1112 -0.1275 'X-RAY DIFFRACTION' 3 ? refined 33.2503 22.8933 43.1849 -0.4782 0.5630 -0.1234 0.1035 -0.0730 0.0833 5.6587 1.3660 6.4914 1.2935 0.9650 -1.9039 0.0520 0.0252 0.0996 -0.0383 -0.0544 -0.4859 0.0682 0.0706 0.0024 'X-RAY DIFFRACTION' 4 ? refined 19.2086 12.1500 35.8613 -0.3331 0.1296 -0.3748 0.3040 -0.0740 -0.1172 4.0126 2.4302 5.3978 -0.5981 1.8513 0.3431 0.4630 0.7828 -0.6963 -0.2097 -0.1113 -0.2226 1.0885 0.9820 -0.3518 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? '{ B|1 - B|27 }' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? '{ A|15 - A|271 }' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? '{ D|1 - D|27 }' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? '{ C|15 - C|271 }' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER ? ? ? 2.11.7 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OG A SER 219 ? ? O9 A 71F 300 ? ? 2.06 2 1 OG C SER 219 ? ? O9 C 71F 301 ? ? 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 41 ? ? -100.72 -67.63 2 1 SER A 48 ? ? -165.22 -169.38 3 1 TYR A 61 ? ? -150.55 79.36 4 1 ASP A 65 ? ? 37.18 47.31 5 1 HIS A 80 ? ? -122.32 -57.48 6 1 THR A 83 ? ? -85.32 -76.69 7 1 ARG A 87 ? ? -34.17 -95.97 8 1 ILE A 89 ? ? -138.65 -68.64 9 1 GLU A 108 ? ? -146.22 -48.26 10 1 ASN A 109 ? ? -152.15 3.05 11 1 SER A 126 ? ? -146.62 -156.07 12 1 VAL A 239 ? ? -56.22 101.97 13 1 SER A 240 ? ? -95.61 -78.05 14 1 PHE B 9 ? ? -116.29 -84.64 15 1 LEU C 41 ? ? -100.46 -66.53 16 1 SER C 48 ? ? -164.35 -168.60 17 1 TYR C 61 ? ? -150.95 79.58 18 1 ASP C 65 ? ? 36.19 48.88 19 1 HIS C 80 ? ? -125.95 -56.61 20 1 THR C 83 ? ? -87.68 -75.33 21 1 ARG C 87 ? ? -32.26 -82.56 22 1 GLU C 108 ? ? -144.90 -48.78 23 1 ASN C 109 ? ? -150.82 4.08 24 1 SER C 126 ? ? -148.22 -155.66 25 1 GLU C 160 ? ? -37.76 -37.12 26 1 CYS C 215 ? ? -123.07 -160.37 27 1 VAL C 239 ? ? -54.92 102.77 28 1 SER C 240 ? ? -97.82 -78.40 29 1 PHE D 9 ? ? -116.24 -85.30 30 1 LYS D 17 ? ? -38.62 -30.52 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A TRP 162 ? A TRP 148 2 1 Y 1 A THR 163 ? A THR 149 3 1 Y 1 A ALA 164 ? A ALA 150 4 1 Y 1 A ASN 165 ? A ASN 151 5 1 Y 1 A VAL 166 ? A VAL 152 6 1 Y 1 A GLY 167 ? A GLY 153 7 1 Y 1 A LYS 168 ? A LYS 154 8 1 Y 1 A GLY 272 ? A GLY 258 9 1 Y 1 A GLU 273 ? A GLU 259 10 1 Y 1 B ASP 28 ? B ASP 28 11 1 Y 1 C GLY 272 ? C GLY 258 12 1 Y 1 C GLU 273 ? C GLU 259 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 '2-methoxybenzoic acid' 71F 4 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 5 'SODIUM ION' NA 6 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #