data_6D12 # _entry.id 6D12 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.321 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6D12 WWPDB D_1000233841 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6D12 _pdbx_database_status.recvd_initial_deposition_date 2018-04-11 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Eichhorn, C.D.' 1 ? 'Cascio, D.' 2 ? 'Sawaya, M.R.' 3 ? 'Feigon, J.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Proc. Natl. Acad. Sci. U.S.A.' _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 115 _citation.language ? _citation.page_first E6457 _citation.page_last E6466 _citation.title 'Structural basis for recognition of human 7SK long noncoding RNA by the La-related protein Larp7.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.1806276115 _citation.pdbx_database_id_PubMed 29946027 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Eichhorn, C.D.' 1 ? primary 'Yang, Y.' 2 ? primary 'Repeta, L.' 3 ? primary 'Feigon, J.' 4 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 95.180 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6D12 _cell.details ? _cell.formula_units_Z ? _cell.length_a 47.910 _cell.length_a_esd ? _cell.length_b 34.030 _cell.length_b_esd ? _cell.length_c 95.010 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6D12 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'La-related protein 7' 13006.630 2 ? 'L475M, E501L, Q504L, L521M' 'RNA binding domain' ? 2 polymer syn 'human 7SK RNA stem-loop 4' 12296.301 1 ? ? ? ? 3 water nat water 18.015 46 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'La ribonucleoprotein domain family member 7,P-TEFb-interaction protein for 7SK stability,PIP7S' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes ;SNATGPQFVSGVIVKIISTEPLPGRKQVRDT(MSE)AAISEVLYVDLLEGDTECHARFKTPLDALAVINAYTEINKKHCW K(MSE)EILSGDHEQRYWQKILVDRQAKLNQPREKKRGTEK ; ;SNATGPQFVSGVIVKIISTEPLPGRKQVRDTMAAISEVLYVDLLEGDTECHARFKTPLDALAVINAYTEINKKHCWKMEI LSGDHEQRYWQKILVDRQAKLNQPREKKRGTEK ; A,B ? 2 polyribonucleotide no no GGGCUGCAUGUGGCAGCUCGGGCUGCAUGUGGCAGCUC GGGCUGCAUGUGGCAGCUCGGGCUGCAUGUGGCAGCUC C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 THR n 1 5 GLY n 1 6 PRO n 1 7 GLN n 1 8 PHE n 1 9 VAL n 1 10 SER n 1 11 GLY n 1 12 VAL n 1 13 ILE n 1 14 VAL n 1 15 LYS n 1 16 ILE n 1 17 ILE n 1 18 SER n 1 19 THR n 1 20 GLU n 1 21 PRO n 1 22 LEU n 1 23 PRO n 1 24 GLY n 1 25 ARG n 1 26 LYS n 1 27 GLN n 1 28 VAL n 1 29 ARG n 1 30 ASP n 1 31 THR n 1 32 MSE n 1 33 ALA n 1 34 ALA n 1 35 ILE n 1 36 SER n 1 37 GLU n 1 38 VAL n 1 39 LEU n 1 40 TYR n 1 41 VAL n 1 42 ASP n 1 43 LEU n 1 44 LEU n 1 45 GLU n 1 46 GLY n 1 47 ASP n 1 48 THR n 1 49 GLU n 1 50 CYS n 1 51 HIS n 1 52 ALA n 1 53 ARG n 1 54 PHE n 1 55 LYS n 1 56 THR n 1 57 PRO n 1 58 LEU n 1 59 ASP n 1 60 ALA n 1 61 LEU n 1 62 ALA n 1 63 VAL n 1 64 ILE n 1 65 ASN n 1 66 ALA n 1 67 TYR n 1 68 THR n 1 69 GLU n 1 70 ILE n 1 71 ASN n 1 72 LYS n 1 73 LYS n 1 74 HIS n 1 75 CYS n 1 76 TRP n 1 77 LYS n 1 78 MSE n 1 79 GLU n 1 80 ILE n 1 81 LEU n 1 82 SER n 1 83 GLY n 1 84 ASP n 1 85 HIS n 1 86 GLU n 1 87 GLN n 1 88 ARG n 1 89 TYR n 1 90 TRP n 1 91 GLN n 1 92 LYS n 1 93 ILE n 1 94 LEU n 1 95 VAL n 1 96 ASP n 1 97 ARG n 1 98 GLN n 1 99 ALA n 1 100 LYS n 1 101 LEU n 1 102 ASN n 1 103 GLN n 1 104 PRO n 1 105 ARG n 1 106 GLU n 1 107 LYS n 1 108 LYS n 1 109 ARG n 1 110 GLY n 1 111 THR n 1 112 GLU n 1 113 LYS n 2 1 G n 2 2 G n 2 3 G n 2 4 C n 2 5 U n 2 6 G n 2 7 C n 2 8 A n 2 9 U n 2 10 G n 2 11 U n 2 12 G n 2 13 G n 2 14 C n 2 15 A n 2 16 G n 2 17 C n 2 18 U n 2 19 C n 2 20 G n 2 21 G n 2 22 G n 2 23 C n 2 24 U n 2 25 G n 2 26 C n 2 27 A n 2 28 U n 2 29 G n 2 30 U n 2 31 G n 2 32 G n 2 33 C n 2 34 A n 2 35 G n 2 36 C n 2 37 U n 2 38 C n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 113 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'LARP7, HDCMA18P' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pETXa/LIC _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 38 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP LARP7_HUMAN Q4G0J3 Q4G0J3-1 1 ;NATGPQFVSGVIVKIISTEPLPGRKQVRDTLAAISEVLYVDLLEGDTECHARFKTPEDAQAVINAYTEINKKHCWKLEIL SGDHEQRYWQKILVDRQAKLNQPREKKRGTEK ; 445 2 PDB 6D12 6D12 ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6D12 A 2 ? 113 ? Q4G0J3 445 ? 556 ? 445 556 2 1 6D12 B 2 ? 113 ? Q4G0J3 445 ? 556 ? 445 556 3 2 6D12 C 1 ? 38 ? 6D12 303 ? 340 ? 303 340 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6D12 SER A 1 ? UNP Q4G0J3 ? ? 'expression tag' 444 1 1 6D12 MSE A 32 ? UNP Q4G0J3 LEU 475 'engineered mutation' 475 2 1 6D12 LEU A 58 ? UNP Q4G0J3 GLU 501 'engineered mutation' 501 3 1 6D12 LEU A 61 ? UNP Q4G0J3 GLN 504 'engineered mutation' 504 4 1 6D12 MSE A 78 ? UNP Q4G0J3 LEU 521 'engineered mutation' 521 5 2 6D12 SER B 1 ? UNP Q4G0J3 ? ? 'expression tag' 444 6 2 6D12 MSE B 32 ? UNP Q4G0J3 LEU 475 'engineered mutation' 475 7 2 6D12 LEU B 58 ? UNP Q4G0J3 GLU 501 'engineered mutation' 501 8 2 6D12 LEU B 61 ? UNP Q4G0J3 GLN 504 'engineered mutation' 504 9 2 6D12 MSE B 78 ? UNP Q4G0J3 LEU 521 'engineered mutation' 521 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6D12 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.13 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 42.16 _exptl_crystal.description 'rods approx 20x20x50 um' _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.1 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.05M Na Cacodylate,0.08M Mg acetate, 24% PEG 4000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-07-20 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979300 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979300 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 35.160 _reflns.entry_id 6D12 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.200 _reflns.d_resolution_low 94.622 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 15929 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.900 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.547 _reflns.pdbx_Rmerge_I_obs 0.169 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 6.540 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.820 _reflns.pdbx_scaling_rejects 65 _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.181 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 120222 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.996 _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.200 2.260 ? 1.430 ? 8879 1188 ? 1187 99.900 ? ? ? ? 1.191 ? ? ? ? ? ? ? ? 7.480 ? ? ? ? 1.279 ? ? 1 1 0.720 ? 2.260 2.320 ? 1.590 ? 8038 1103 ? 1099 99.600 ? ? ? ? 1.078 ? ? ? ? ? ? ? ? 7.314 ? ? ? ? 1.159 ? ? 2 1 0.762 ? 2.320 2.390 ? 2.040 ? 8804 1112 ? 1113 100.0 ? ? ? ? 0.836 ? ? ? ? ? ? ? ? 7.910 ? ? ? ? 0.895 ? ? 3 1 0.897 ? 2.390 2.460 ? 2.360 ? 8585 1086 ? 1085 99.900 ? ? ? ? 0.726 ? ? ? ? ? ? ? ? 7.912 ? ? ? ? 0.777 ? ? 4 1 0.887 ? 2.460 2.540 ? 2.630 ? 7985 1029 ? 1029 100.000 ? ? ? ? 0.652 ? ? ? ? ? ? ? ? 7.760 ? ? ? ? 0.698 ? ? 5 1 0.915 ? 2.540 2.630 ? 3.310 ? 7806 1022 ? 1022 100.000 ? ? ? ? 0.489 ? ? ? ? ? ? ? ? 7.638 ? ? ? ? 0.525 ? ? 6 1 0.941 ? 2.630 2.730 ? 3.580 ? 6993 939 ? 939 100.000 ? ? ? ? 0.441 ? ? ? ? ? ? ? ? 7.447 ? ? ? ? 0.474 ? ? 7 1 0.945 ? 2.730 2.840 ? 4.750 ? 7124 978 ? 976 99.800 ? ? ? ? 0.306 ? ? ? ? ? ? ? ? 7.299 ? ? ? ? 0.329 ? ? 8 1 0.972 ? 2.840 2.970 ? 5.720 ? 6935 877 ? 878 100.0 ? ? ? ? 0.263 ? ? ? ? ? ? ? ? 7.899 ? ? ? ? 0.281 ? ? 9 1 0.985 ? 2.970 3.110 ? 7.010 ? 6758 865 ? 864 99.900 ? ? ? ? 0.204 ? ? ? ? ? ? ? ? 7.822 ? ? ? ? 0.218 ? ? 10 1 0.987 ? 3.110 3.280 ? 8.310 ? 6326 825 ? 825 100.000 ? ? ? ? 0.182 ? ? ? ? ? ? ? ? 7.668 ? ? ? ? 0.195 ? ? 11 1 0.991 ? 3.280 3.480 ? 9.710 ? 5681 784 ? 782 99.700 ? ? ? ? 0.152 ? ? ? ? ? ? ? ? 7.265 ? ? ? ? 0.164 ? ? 12 1 0.991 ? 3.480 3.720 ? 10.990 ? 5218 733 ? 733 100.000 ? ? ? ? 0.147 ? ? ? ? ? ? ? ? 7.119 ? ? ? ? 0.159 ? ? 13 1 0.989 ? 3.720 4.010 ? 12.700 ? 5366 686 ? 684 99.700 ? ? ? ? 0.146 ? ? ? ? ? ? ? ? 7.845 ? ? ? ? 0.156 ? ? 14 1 0.993 ? 4.010 4.400 ? 13.960 ? 4867 634 ? 633 99.800 ? ? ? ? 0.134 ? ? ? ? ? ? ? ? 7.689 ? ? ? ? 0.145 ? ? 15 1 0.990 ? 4.400 4.920 ? 14.300 ? 4291 584 ? 583 99.800 ? ? ? ? 0.120 ? ? ? ? ? ? ? ? 7.360 ? ? ? ? 0.129 ? ? 16 1 0.993 ? 4.920 5.680 ? 13.580 ? 3486 510 ? 510 100.000 ? ? ? ? 0.109 ? ? ? ? ? ? ? ? 6.835 ? ? ? ? 0.118 ? ? 17 1 0.994 ? 5.680 6.950 ? 14.570 ? 3308 441 ? 440 99.800 ? ? ? ? 0.123 ? ? ? ? ? ? ? ? 7.518 ? ? ? ? 0.132 ? ? 18 1 0.995 ? 6.950 9.830 ? 16.090 ? 2405 345 ? 340 98.600 ? ? ? ? 0.102 ? ? ? ? ? ? ? ? 7.074 ? ? ? ? 0.111 ? ? 19 1 0.990 ? 9.830 94.622 ? 17.270 ? 1367 208 ? 207 99.500 ? ? ? ? 0.091 ? ? ? ? ? ? ? ? 6.604 ? ? ? ? 0.098 ? ? 20 1 0.998 ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 146.020 _refine.B_iso_mean 61.2933 _refine.B_iso_min 15.670 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6D12 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.2050 _refine.ls_d_res_low 94.6220 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 14297 _refine.ls_number_reflns_R_free 719 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 90.4600 _refine.ls_percent_reflns_R_free 5.0300 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2299 _refine.ls_R_factor_R_free 0.2673 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2279 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.370 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 30.2300 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3200 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.2050 _refine_hist.d_res_low 94.6220 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 46 _refine_hist.number_atoms_total 2421 _refine_hist.pdbx_number_residues_total 241 _refine_hist.pdbx_B_iso_mean_solvent 36.21 _refine_hist.pdbx_number_atoms_protein 1559 _refine_hist.pdbx_number_atoms_nucleic_acid 816 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 ? 2501 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.999 ? 3580 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.056 ? 440 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 ? 313 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 19.552 ? 1030 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.2050 2.3752 1638 . 79 1559 53.0000 . . . 0.3614 0.0000 0.2719 . . . . . . 5 . . . 'X-RAY DIFFRACTION' 2.3752 2.6143 3116 . 159 2957 100.0000 . . . 0.3540 0.0000 0.2929 . . . . . . 5 . . . 'X-RAY DIFFRACTION' 2.6143 2.9926 3139 . 158 2981 100.0000 . . . 0.3328 0.0000 0.2759 . . . . . . 5 . . . 'X-RAY DIFFRACTION' 2.9926 3.7704 3159 . 153 3006 100.0000 . . . 0.2667 0.0000 0.2166 . . . . . . 5 . . . 'X-RAY DIFFRACTION' 3.7704 94.7089 3245 . 170 3075 100.0000 . . . 0.2174 0.0000 0.1962 . . . . . . 5 . . . # _struct.entry_id 6D12 _struct.title 'Crystal structure of C-terminal xRRM domain of human Larp7 bound to 7SK stem-loop 4 RNA' _struct.pdbx_descriptor 'La-related protein 7/RNA Complex' _struct.pdbx_model_details '7SK protein in complex with RNA' _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6D12 _struct_keywords.text 'RNA RECOGNITION MOTIF, RRM, RNA APICAL LOOP, RNA BINDING PROTEIN-RNA complex' _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN/RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 24 ? ALA A 34 ? GLY A 467 ALA A 477 1 ? 11 HELX_P HELX_P2 AA2 THR A 56 ? ALA A 66 ? THR A 499 ALA A 509 1 ? 11 HELX_P HELX_P3 AA3 SER A 82 ? ASN A 102 ? SER A 525 ASN A 545 1 ? 21 HELX_P HELX_P4 AA4 GLY B 24 ? ALA B 34 ? GLY B 467 ALA B 477 1 ? 11 HELX_P HELX_P5 AA5 THR B 56 ? ASN B 65 ? THR B 499 ASN B 508 1 ? 10 HELX_P HELX_P6 AA6 ILE B 70 ? CYS B 75 ? ILE B 513 CYS B 518 1 ? 6 HELX_P HELX_P7 AA7 SER B 82 ? ASN B 102 ? SER B 525 ASN B 545 1 ? 21 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? A THR 31 C ? ? ? 1_555 A MSE 32 N ? ? A THR 474 A MSE 475 1_555 ? ? ? ? ? ? ? 1.323 ? covale2 covale both ? A MSE 32 C ? ? ? 1_555 A ALA 33 N ? ? A MSE 475 A ALA 476 1_555 ? ? ? ? ? ? ? 1.336 ? covale3 covale both ? A LYS 77 C ? ? ? 1_555 A MSE 78 N ? ? A LYS 520 A MSE 521 1_555 ? ? ? ? ? ? ? 1.319 ? covale4 covale both ? A MSE 78 C ? ? ? 1_555 A GLU 79 N ? ? A MSE 521 A GLU 522 1_555 ? ? ? ? ? ? ? 1.333 ? covale5 covale both ? B THR 31 C ? ? ? 1_555 B MSE 32 N ? ? B THR 474 B MSE 475 1_555 ? ? ? ? ? ? ? 1.331 ? covale6 covale both ? B MSE 32 C ? ? ? 1_555 B ALA 33 N ? ? B MSE 475 B ALA 476 1_555 ? ? ? ? ? ? ? 1.331 ? covale7 covale both ? B LYS 77 C ? ? ? 1_555 B MSE 78 N ? ? B LYS 520 B MSE 521 1_555 ? ? ? ? ? ? ? 1.320 ? covale8 covale both ? B MSE 78 C ? ? ? 1_555 B GLU 79 N ? ? B MSE 521 B GLU 522 1_555 ? ? ? ? ? ? ? 1.332 ? hydrog1 hydrog ? ? C G 1 N1 ? ? ? 1_555 C C 19 N3 ? ? C G 303 C C 321 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? C G 1 N2 ? ? ? 1_555 C C 19 O2 ? ? C G 303 C C 321 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? C G 1 O6 ? ? ? 1_555 C C 19 N4 ? ? C G 303 C C 321 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? C G 2 N1 ? ? ? 1_555 C U 18 O2 ? ? C G 304 C U 320 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? hydrog5 hydrog ? ? C G 2 O6 ? ? ? 1_555 C U 18 N3 ? ? C G 304 C U 320 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? hydrog6 hydrog ? ? C G 3 N1 ? ? ? 1_555 C C 17 N3 ? ? C G 305 C C 319 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? C G 3 N2 ? ? ? 1_555 C C 17 O2 ? ? C G 305 C C 319 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? C G 3 O6 ? ? ? 1_555 C C 17 N4 ? ? C G 305 C C 319 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? C C 4 N3 ? ? ? 1_555 C G 16 N1 ? ? C C 306 C G 318 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? C C 4 N4 ? ? ? 1_555 C G 16 O6 ? ? C C 306 C G 318 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? C C 4 O2 ? ? ? 1_555 C G 16 N2 ? ? C C 306 C G 318 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog12 hydrog ? ? C U 5 N3 ? ? ? 1_555 C A 15 N1 ? ? C U 307 C A 317 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog13 hydrog ? ? C U 5 O4 ? ? ? 1_555 C A 15 N6 ? ? C U 307 C A 317 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog14 hydrog ? ? C G 6 N1 ? ? ? 1_555 C C 14 N3 ? ? C G 308 C C 316 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? C G 6 N2 ? ? ? 1_555 C C 14 O2 ? ? C G 308 C C 316 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog16 hydrog ? ? C G 6 O6 ? ? ? 1_555 C C 14 N4 ? ? C G 308 C C 316 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog17 hydrog ? ? C C 7 N3 ? ? ? 1_555 C G 13 N1 ? ? C C 309 C G 315 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog18 hydrog ? ? C C 7 N4 ? ? ? 1_555 C G 13 O6 ? ? C C 309 C G 315 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog19 hydrog ? ? C C 7 O2 ? ? ? 1_555 C G 13 N2 ? ? C C 309 C G 315 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog20 hydrog ? ? C G 20 N2 ? ? ? 1_555 C C 38 N3 ? ? C G 322 C C 340 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? hydrog21 hydrog ? ? C G 21 N2 ? ? ? 1_555 C U 37 O2 ? ? C G 323 C U 339 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? hydrog22 hydrog ? ? C G 22 N1 ? ? ? 1_555 C C 36 N3 ? ? C G 324 C C 338 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog23 hydrog ? ? C G 22 N2 ? ? ? 1_555 C C 36 O2 ? ? C G 324 C C 338 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog24 hydrog ? ? C G 22 O6 ? ? ? 1_555 C C 36 N4 ? ? C G 324 C C 338 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog25 hydrog ? ? C C 23 N3 ? ? ? 1_555 C G 35 N1 ? ? C C 325 C G 337 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog26 hydrog ? ? C C 23 N4 ? ? ? 1_555 C G 35 O6 ? ? C C 325 C G 337 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog27 hydrog ? ? C C 23 O2 ? ? ? 1_555 C G 35 N2 ? ? C C 325 C G 337 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog28 hydrog ? ? C U 24 N3 ? ? ? 1_555 C A 34 N1 ? ? C U 326 C A 336 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog29 hydrog ? ? C U 24 O4 ? ? ? 1_555 C A 34 N6 ? ? C U 326 C A 336 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog30 hydrog ? ? C G 25 N1 ? ? ? 1_555 C C 33 N3 ? ? C G 327 C C 335 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog31 hydrog ? ? C G 25 N2 ? ? ? 1_555 C C 33 O2 ? ? C G 327 C C 335 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog32 hydrog ? ? C G 25 O6 ? ? ? 1_555 C C 33 N4 ? ? C G 327 C C 335 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog33 hydrog ? ? C C 26 N3 ? ? ? 1_555 C G 32 N1 ? ? C C 328 C G 334 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog34 hydrog ? ? C C 26 N4 ? ? ? 1_555 C G 32 O6 ? ? C C 328 C G 334 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog35 hydrog ? ? C C 26 O2 ? ? ? 1_555 C G 32 N2 ? ? C C 328 C G 334 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 38 ? ASP A 42 ? VAL A 481 ASP A 485 AA1 2 GLU A 49 ? PHE A 54 ? GLU A 492 PHE A 497 AA1 3 ILE A 13 ? SER A 18 ? ILE A 456 SER A 461 AA1 4 TRP A 76 ? ILE A 80 ? TRP A 519 ILE A 523 AA2 1 VAL B 38 ? ASP B 42 ? VAL B 481 ASP B 485 AA2 2 GLU B 49 ? PHE B 54 ? GLU B 492 PHE B 497 AA2 3 ILE B 13 ? SER B 18 ? ILE B 456 SER B 461 AA2 4 TRP B 76 ? ILE B 80 ? TRP B 519 ILE B 523 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 39 ? N LEU A 482 O ARG A 53 ? O ARG A 496 AA1 2 3 O CYS A 50 ? O CYS A 493 N ILE A 16 ? N ILE A 459 AA1 3 4 N LYS A 15 ? N LYS A 458 O GLU A 79 ? O GLU A 522 AA2 1 2 N ASP B 42 ? N ASP B 485 O HIS B 51 ? O HIS B 494 AA2 2 3 O CYS B 50 ? O CYS B 493 N ILE B 16 ? N ILE B 459 AA2 3 4 N ILE B 17 ? N ILE B 460 O LYS B 77 ? O LYS B 520 # _atom_sites.entry_id 6D12 _atom_sites.fract_transf_matrix[1][1] 0.020872 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001893 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.029386 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010568 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 444 ? ? ? A . n A 1 2 ASN 2 445 ? ? ? A . n A 1 3 ALA 3 446 446 ALA ALA A . n A 1 4 THR 4 447 447 THR THR A . n A 1 5 GLY 5 448 448 GLY GLY A . n A 1 6 PRO 6 449 449 PRO PRO A . n A 1 7 GLN 7 450 450 GLN GLN A . n A 1 8 PHE 8 451 451 PHE PHE A . n A 1 9 VAL 9 452 452 VAL VAL A . n A 1 10 SER 10 453 453 SER SER A . n A 1 11 GLY 11 454 454 GLY GLY A . n A 1 12 VAL 12 455 455 VAL VAL A . n A 1 13 ILE 13 456 456 ILE ILE A . n A 1 14 VAL 14 457 457 VAL VAL A . n A 1 15 LYS 15 458 458 LYS LYS A . n A 1 16 ILE 16 459 459 ILE ILE A . n A 1 17 ILE 17 460 460 ILE ILE A . n A 1 18 SER 18 461 461 SER SER A . n A 1 19 THR 19 462 462 THR THR A . n A 1 20 GLU 20 463 463 GLU GLU A . n A 1 21 PRO 21 464 464 PRO PRO A . n A 1 22 LEU 22 465 465 LEU LEU A . n A 1 23 PRO 23 466 466 PRO PRO A . n A 1 24 GLY 24 467 467 GLY GLY A . n A 1 25 ARG 25 468 468 ARG ARG A . n A 1 26 LYS 26 469 469 LYS LYS A . n A 1 27 GLN 27 470 470 GLN GLN A . n A 1 28 VAL 28 471 471 VAL VAL A . n A 1 29 ARG 29 472 472 ARG ARG A . n A 1 30 ASP 30 473 473 ASP ASP A . n A 1 31 THR 31 474 474 THR THR A . n A 1 32 MSE 32 475 475 MSE MSE A . n A 1 33 ALA 33 476 476 ALA ALA A . n A 1 34 ALA 34 477 477 ALA ALA A . n A 1 35 ILE 35 478 478 ILE ILE A . n A 1 36 SER 36 479 479 SER SER A . n A 1 37 GLU 37 480 480 GLU GLU A . n A 1 38 VAL 38 481 481 VAL VAL A . n A 1 39 LEU 39 482 482 LEU LEU A . n A 1 40 TYR 40 483 483 TYR TYR A . n A 1 41 VAL 41 484 484 VAL VAL A . n A 1 42 ASP 42 485 485 ASP ASP A . n A 1 43 LEU 43 486 486 LEU LEU A . n A 1 44 LEU 44 487 487 LEU LEU A . n A 1 45 GLU 45 488 488 GLU GLU A . n A 1 46 GLY 46 489 489 GLY GLY A . n A 1 47 ASP 47 490 490 ASP ASP A . n A 1 48 THR 48 491 491 THR THR A . n A 1 49 GLU 49 492 492 GLU GLU A . n A 1 50 CYS 50 493 493 CYS CYS A . n A 1 51 HIS 51 494 494 HIS HIS A . n A 1 52 ALA 52 495 495 ALA ALA A . n A 1 53 ARG 53 496 496 ARG ARG A . n A 1 54 PHE 54 497 497 PHE PHE A . n A 1 55 LYS 55 498 498 LYS LYS A . n A 1 56 THR 56 499 499 THR THR A . n A 1 57 PRO 57 500 500 PRO PRO A . n A 1 58 LEU 58 501 501 LEU LEU A . n A 1 59 ASP 59 502 502 ASP ASP A . n A 1 60 ALA 60 503 503 ALA ALA A . n A 1 61 LEU 61 504 504 LEU LEU A . n A 1 62 ALA 62 505 505 ALA ALA A . n A 1 63 VAL 63 506 506 VAL VAL A . n A 1 64 ILE 64 507 507 ILE ILE A . n A 1 65 ASN 65 508 508 ASN ASN A . n A 1 66 ALA 66 509 509 ALA ALA A . n A 1 67 TYR 67 510 510 TYR TYR A . n A 1 68 THR 68 511 511 THR THR A . n A 1 69 GLU 69 512 512 GLU GLU A . n A 1 70 ILE 70 513 513 ILE ILE A . n A 1 71 ASN 71 514 514 ASN ASN A . n A 1 72 LYS 72 515 515 LYS LYS A . n A 1 73 LYS 73 516 516 LYS LYS A . n A 1 74 HIS 74 517 517 HIS HIS A . n A 1 75 CYS 75 518 518 CYS CYS A . n A 1 76 TRP 76 519 519 TRP TRP A . n A 1 77 LYS 77 520 520 LYS LYS A . n A 1 78 MSE 78 521 521 MSE MSE A . n A 1 79 GLU 79 522 522 GLU GLU A . n A 1 80 ILE 80 523 523 ILE ILE A . n A 1 81 LEU 81 524 524 LEU LEU A . n A 1 82 SER 82 525 525 SER SER A . n A 1 83 GLY 83 526 526 GLY GLY A . n A 1 84 ASP 84 527 527 ASP ASP A . n A 1 85 HIS 85 528 528 HIS HIS A . n A 1 86 GLU 86 529 529 GLU GLU A . n A 1 87 GLN 87 530 530 GLN GLN A . n A 1 88 ARG 88 531 531 ARG ARG A . n A 1 89 TYR 89 532 532 TYR TYR A . n A 1 90 TRP 90 533 533 TRP TRP A . n A 1 91 GLN 91 534 534 GLN GLN A . n A 1 92 LYS 92 535 535 LYS LYS A . n A 1 93 ILE 93 536 536 ILE ILE A . n A 1 94 LEU 94 537 537 LEU LEU A . n A 1 95 VAL 95 538 538 VAL VAL A . n A 1 96 ASP 96 539 539 ASP ASP A . n A 1 97 ARG 97 540 540 ARG ARG A . n A 1 98 GLN 98 541 541 GLN GLN A . n A 1 99 ALA 99 542 542 ALA ALA A . n A 1 100 LYS 100 543 543 LYS LYS A . n A 1 101 LEU 101 544 544 LEU LEU A . n A 1 102 ASN 102 545 545 ASN ASN A . n A 1 103 GLN 103 546 ? ? ? A . n A 1 104 PRO 104 547 ? ? ? A . n A 1 105 ARG 105 548 ? ? ? A . n A 1 106 GLU 106 549 ? ? ? A . n A 1 107 LYS 107 550 ? ? ? A . n A 1 108 LYS 108 551 ? ? ? A . n A 1 109 ARG 109 552 ? ? ? A . n A 1 110 GLY 110 553 ? ? ? A . n A 1 111 THR 111 554 ? ? ? A . n A 1 112 GLU 112 555 ? ? ? A . n A 1 113 LYS 113 556 ? ? ? A . n B 1 1 SER 1 444 ? ? ? B . n B 1 2 ASN 2 445 ? ? ? B . n B 1 3 ALA 3 446 446 ALA ALA B . n B 1 4 THR 4 447 447 THR THR B . n B 1 5 GLY 5 448 448 GLY GLY B . n B 1 6 PRO 6 449 449 PRO PRO B . n B 1 7 GLN 7 450 450 GLN GLN B . n B 1 8 PHE 8 451 451 PHE PHE B . n B 1 9 VAL 9 452 452 VAL VAL B . n B 1 10 SER 10 453 453 SER SER B . n B 1 11 GLY 11 454 454 GLY GLY B . n B 1 12 VAL 12 455 455 VAL VAL B . n B 1 13 ILE 13 456 456 ILE ILE B . n B 1 14 VAL 14 457 457 VAL VAL B . n B 1 15 LYS 15 458 458 LYS LYS B . n B 1 16 ILE 16 459 459 ILE ILE B . n B 1 17 ILE 17 460 460 ILE ILE B . n B 1 18 SER 18 461 461 SER SER B . n B 1 19 THR 19 462 462 THR THR B . n B 1 20 GLU 20 463 463 GLU GLU B . n B 1 21 PRO 21 464 464 PRO PRO B . n B 1 22 LEU 22 465 465 LEU LEU B . n B 1 23 PRO 23 466 466 PRO PRO B . n B 1 24 GLY 24 467 467 GLY GLY B . n B 1 25 ARG 25 468 468 ARG ARG B . n B 1 26 LYS 26 469 469 LYS LYS B . n B 1 27 GLN 27 470 470 GLN GLN B . n B 1 28 VAL 28 471 471 VAL VAL B . n B 1 29 ARG 29 472 472 ARG ARG B . n B 1 30 ASP 30 473 473 ASP ASP B . n B 1 31 THR 31 474 474 THR THR B . n B 1 32 MSE 32 475 475 MSE MSE B . n B 1 33 ALA 33 476 476 ALA ALA B . n B 1 34 ALA 34 477 477 ALA ALA B . n B 1 35 ILE 35 478 478 ILE ILE B . n B 1 36 SER 36 479 479 SER SER B . n B 1 37 GLU 37 480 480 GLU GLU B . n B 1 38 VAL 38 481 481 VAL VAL B . n B 1 39 LEU 39 482 482 LEU LEU B . n B 1 40 TYR 40 483 483 TYR TYR B . n B 1 41 VAL 41 484 484 VAL VAL B . n B 1 42 ASP 42 485 485 ASP ASP B . n B 1 43 LEU 43 486 486 LEU LEU B . n B 1 44 LEU 44 487 487 LEU LEU B . n B 1 45 GLU 45 488 488 GLU GLU B . n B 1 46 GLY 46 489 489 GLY GLY B . n B 1 47 ASP 47 490 490 ASP ASP B . n B 1 48 THR 48 491 491 THR THR B . n B 1 49 GLU 49 492 492 GLU GLU B . n B 1 50 CYS 50 493 493 CYS CYS B . n B 1 51 HIS 51 494 494 HIS HIS B . n B 1 52 ALA 52 495 495 ALA ALA B . n B 1 53 ARG 53 496 496 ARG ARG B . n B 1 54 PHE 54 497 497 PHE PHE B . n B 1 55 LYS 55 498 498 LYS LYS B . n B 1 56 THR 56 499 499 THR THR B . n B 1 57 PRO 57 500 500 PRO PRO B . n B 1 58 LEU 58 501 501 LEU LEU B . n B 1 59 ASP 59 502 502 ASP ASP B . n B 1 60 ALA 60 503 503 ALA ALA B . n B 1 61 LEU 61 504 504 LEU LEU B . n B 1 62 ALA 62 505 505 ALA ALA B . n B 1 63 VAL 63 506 506 VAL VAL B . n B 1 64 ILE 64 507 507 ILE ILE B . n B 1 65 ASN 65 508 508 ASN ASN B . n B 1 66 ALA 66 509 509 ALA ALA B . n B 1 67 TYR 67 510 510 TYR TYR B . n B 1 68 THR 68 511 511 THR THR B . n B 1 69 GLU 69 512 512 GLU GLU B . n B 1 70 ILE 70 513 513 ILE ILE B . n B 1 71 ASN 71 514 514 ASN ASN B . n B 1 72 LYS 72 515 515 LYS LYS B . n B 1 73 LYS 73 516 516 LYS LYS B . n B 1 74 HIS 74 517 517 HIS HIS B . n B 1 75 CYS 75 518 518 CYS CYS B . n B 1 76 TRP 76 519 519 TRP TRP B . n B 1 77 LYS 77 520 520 LYS LYS B . n B 1 78 MSE 78 521 521 MSE MSE B . n B 1 79 GLU 79 522 522 GLU GLU B . n B 1 80 ILE 80 523 523 ILE ILE B . n B 1 81 LEU 81 524 524 LEU LEU B . n B 1 82 SER 82 525 525 SER SER B . n B 1 83 GLY 83 526 526 GLY GLY B . n B 1 84 ASP 84 527 527 ASP ASP B . n B 1 85 HIS 85 528 528 HIS HIS B . n B 1 86 GLU 86 529 529 GLU GLU B . n B 1 87 GLN 87 530 530 GLN GLN B . n B 1 88 ARG 88 531 531 ARG ARG B . n B 1 89 TYR 89 532 532 TYR TYR B . n B 1 90 TRP 90 533 533 TRP TRP B . n B 1 91 GLN 91 534 534 GLN GLN B . n B 1 92 LYS 92 535 535 LYS LYS B . n B 1 93 ILE 93 536 536 ILE ILE B . n B 1 94 LEU 94 537 537 LEU LEU B . n B 1 95 VAL 95 538 538 VAL VAL B . n B 1 96 ASP 96 539 539 ASP ASP B . n B 1 97 ARG 97 540 540 ARG ARG B . n B 1 98 GLN 98 541 541 GLN GLN B . n B 1 99 ALA 99 542 542 ALA ALA B . n B 1 100 LYS 100 543 543 LYS LYS B . n B 1 101 LEU 101 544 544 LEU LEU B . n B 1 102 ASN 102 545 545 ASN ASN B . n B 1 103 GLN 103 546 546 GLN GLN B . n B 1 104 PRO 104 547 547 PRO PRO B . n B 1 105 ARG 105 548 548 ARG ARG B . n B 1 106 GLU 106 549 ? ? ? B . n B 1 107 LYS 107 550 ? ? ? B . n B 1 108 LYS 108 551 ? ? ? B . n B 1 109 ARG 109 552 ? ? ? B . n B 1 110 GLY 110 553 ? ? ? B . n B 1 111 THR 111 554 ? ? ? B . n B 1 112 GLU 112 555 ? ? ? B . n B 1 113 LYS 113 556 ? ? ? B . n C 2 1 G 1 303 303 G G C . n C 2 2 G 2 304 304 G G C . n C 2 3 G 3 305 305 G G C . n C 2 4 C 4 306 306 C C C . n C 2 5 U 5 307 307 U U C . n C 2 6 G 6 308 308 G G C . n C 2 7 C 7 309 309 C C C . n C 2 8 A 8 310 310 A A C . n C 2 9 U 9 311 311 U U C . n C 2 10 G 10 312 312 G G C . n C 2 11 U 11 313 313 U U C . n C 2 12 G 12 314 314 G G C . n C 2 13 G 13 315 315 G G C . n C 2 14 C 14 316 316 C C C . n C 2 15 A 15 317 317 A A C . n C 2 16 G 16 318 318 G G C . n C 2 17 C 17 319 319 C C C . n C 2 18 U 18 320 320 U U C . n C 2 19 C 19 321 321 C C C . n C 2 20 G 20 322 322 G G C . n C 2 21 G 21 323 323 G G C . n C 2 22 G 22 324 324 G G C . n C 2 23 C 23 325 325 C C C . n C 2 24 U 24 326 326 U U C . n C 2 25 G 25 327 327 G G C . n C 2 26 C 26 328 328 C C C . n C 2 27 A 27 329 329 A A C . n C 2 28 U 28 330 330 U U C . n C 2 29 G 29 331 331 G G C . n C 2 30 U 30 332 332 U U C . n C 2 31 G 31 333 333 G G C . n C 2 32 G 32 334 334 G G C . n C 2 33 C 33 335 335 C C C . n C 2 34 A 34 336 336 A A C . n C 2 35 G 35 337 337 G G C . n C 2 36 C 36 338 338 C C C . n C 2 37 U 37 339 339 U U C . n C 2 38 C 38 340 340 C C C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 HOH 1 601 33 HOH HOH A . D 3 HOH 2 602 6 HOH HOH A . D 3 HOH 3 603 3 HOH HOH A . D 3 HOH 4 604 18 HOH HOH A . D 3 HOH 5 605 45 HOH HOH A . D 3 HOH 6 606 41 HOH HOH A . D 3 HOH 7 607 17 HOH HOH A . D 3 HOH 8 608 22 HOH HOH A . D 3 HOH 9 609 44 HOH HOH A . D 3 HOH 10 610 7 HOH HOH A . D 3 HOH 11 611 16 HOH HOH A . D 3 HOH 12 612 23 HOH HOH A . D 3 HOH 13 613 10 HOH HOH A . D 3 HOH 14 614 28 HOH HOH A . D 3 HOH 15 615 13 HOH HOH A . E 3 HOH 1 601 27 HOH HOH B . E 3 HOH 2 602 37 HOH HOH B . E 3 HOH 3 603 12 HOH HOH B . E 3 HOH 4 604 4 HOH HOH B . E 3 HOH 5 605 2 HOH HOH B . E 3 HOH 6 606 25 HOH HOH B . E 3 HOH 7 607 14 HOH HOH B . E 3 HOH 8 608 32 HOH HOH B . E 3 HOH 9 609 42 HOH HOH B . E 3 HOH 10 610 24 HOH HOH B . E 3 HOH 11 611 38 HOH HOH B . E 3 HOH 12 612 30 HOH HOH B . E 3 HOH 13 613 19 HOH HOH B . E 3 HOH 14 614 29 HOH HOH B . E 3 HOH 15 615 20 HOH HOH B . E 3 HOH 16 616 35 HOH HOH B . E 3 HOH 17 617 21 HOH HOH B . E 3 HOH 18 618 31 HOH HOH B . E 3 HOH 19 619 5 HOH HOH B . E 3 HOH 20 620 40 HOH HOH B . E 3 HOH 21 621 36 HOH HOH B . E 3 HOH 22 622 26 HOH HOH B . E 3 HOH 23 623 43 HOH HOH B . E 3 HOH 24 624 1 HOH HOH B . E 3 HOH 25 625 8 HOH HOH B . E 3 HOH 26 626 11 HOH HOH B . E 3 HOH 27 627 46 HOH HOH B . E 3 HOH 28 628 34 HOH HOH B . E 3 HOH 29 629 15 HOH HOH B . E 3 HOH 30 630 9 HOH HOH B . F 3 HOH 1 401 39 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2630 ? 1 MORE -17 ? 1 'SSA (A^2)' 17380 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-06-27 2 'Structure model' 1 1 2018-07-11 3 'Structure model' 1 2 2018-07-25 4 'Structure model' 1 3 2019-12-18 5 'Structure model' 1 4 2020-01-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 4 'Structure model' 'Author supporting evidence' 6 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' citation 3 4 'Structure model' pdbx_audit_support 4 5 'Structure model' reflns_shell # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_abbrev' 2 2 'Structure model' '_citation.pdbx_database_id_PubMed' 3 2 'Structure model' '_citation.title' 4 3 'Structure model' '_citation.journal_volume' 5 3 'Structure model' '_citation.page_first' 6 3 'Structure model' '_citation.page_last' 7 4 'Structure model' '_pdbx_audit_support.funding_organization' 8 5 'Structure model' '_reflns_shell.percent_possible_all' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 12.7690 2.6248 19.2354 0.3943 0.1926 0.2410 -0.0096 -0.0729 -0.0283 2.8531 2.9636 4.2613 -0.4840 -0.3483 0.2194 -0.0800 -0.0502 0.1257 -0.2996 0.4037 -0.2972 0.4486 -0.5500 -0.0218 'X-RAY DIFFRACTION' 2 ? refined 3.5366 -2.2215 89.0625 0.2018 0.1944 0.2075 -0.0038 -0.0942 -0.0173 3.0839 4.3921 2.5587 0.2421 -1.1655 0.8271 0.0237 -0.0771 0.0545 0.1400 -0.0894 -0.0983 -0.2574 0.1437 -0.1274 'X-RAY DIFFRACTION' 3 ? refined 4.9584 0.1685 54.1811 1.6583 1.3327 0.4101 0.2137 0.2481 -0.2467 -1.5386 -0.4684 3.4561 -0.1880 -1.9751 1.6573 0.0694 0.2099 -0.1471 0.1474 0.4445 -1.1162 -1.0496 -0.3938 -1.3369 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 446 A 545 ;(chain 'A' and resid 446 through 545) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 446 B 548 ;(chain 'B' and resid 446 through 548) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 C 303 C 340 ;(chain 'C' and resid 303 through 340) ; ? ? ? ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? 20170615 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.24 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 20170615 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? HKL2Map ? ? ? 2016/1 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 513 ? ? -128.10 -62.23 2 1 ALA B 509 ? ? -104.02 73.60 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 450 ? CG ? A GLN 7 CG 2 1 Y 1 A GLN 450 ? CD ? A GLN 7 CD 3 1 Y 1 A GLN 450 ? OE1 ? A GLN 7 OE1 4 1 Y 1 A GLN 450 ? NE2 ? A GLN 7 NE2 5 1 Y 1 A GLU 463 ? CG ? A GLU 20 CG 6 1 Y 1 A GLU 463 ? CD ? A GLU 20 CD 7 1 Y 1 A GLU 463 ? OE1 ? A GLU 20 OE1 8 1 Y 1 A GLU 463 ? OE2 ? A GLU 20 OE2 9 1 Y 1 A LYS 469 ? CG ? A LYS 26 CG 10 1 Y 1 A LYS 469 ? CD ? A LYS 26 CD 11 1 Y 1 A LYS 469 ? CE ? A LYS 26 CE 12 1 Y 1 A LYS 469 ? NZ ? A LYS 26 NZ 13 1 Y 1 A GLN 470 ? CG ? A GLN 27 CG 14 1 Y 1 A GLN 470 ? CD ? A GLN 27 CD 15 1 Y 1 A GLN 470 ? OE1 ? A GLN 27 OE1 16 1 Y 1 A GLN 470 ? NE2 ? A GLN 27 NE2 17 1 Y 1 A LEU 487 ? CG ? A LEU 44 CG 18 1 Y 1 A LEU 487 ? CD1 ? A LEU 44 CD1 19 1 Y 1 A LEU 487 ? CD2 ? A LEU 44 CD2 20 1 Y 1 A GLU 488 ? CG ? A GLU 45 CG 21 1 Y 1 A GLU 488 ? CD ? A GLU 45 CD 22 1 Y 1 A GLU 488 ? OE1 ? A GLU 45 OE1 23 1 Y 1 A GLU 488 ? OE2 ? A GLU 45 OE2 24 1 Y 1 A GLU 512 ? CG ? A GLU 69 CG 25 1 Y 1 A GLU 512 ? CD ? A GLU 69 CD 26 1 Y 1 A GLU 512 ? OE1 ? A GLU 69 OE1 27 1 Y 1 A GLU 512 ? OE2 ? A GLU 69 OE2 28 1 Y 1 A LYS 520 ? CE ? A LYS 77 CE 29 1 Y 1 A LYS 520 ? NZ ? A LYS 77 NZ 30 1 Y 1 A LEU 537 ? CG ? A LEU 94 CG 31 1 Y 1 A LEU 537 ? CD1 ? A LEU 94 CD1 32 1 Y 1 A LEU 537 ? CD2 ? A LEU 94 CD2 33 1 Y 1 A GLN 541 ? CG ? A GLN 98 CG 34 1 Y 1 A GLN 541 ? CD ? A GLN 98 CD 35 1 Y 1 A GLN 541 ? OE1 ? A GLN 98 OE1 36 1 Y 1 A GLN 541 ? NE2 ? A GLN 98 NE2 37 1 Y 1 B THR 447 ? OG1 ? B THR 4 OG1 38 1 Y 1 B THR 447 ? CG2 ? B THR 4 CG2 39 1 Y 1 B LYS 469 ? CG ? B LYS 26 CG 40 1 Y 1 B LYS 469 ? CD ? B LYS 26 CD 41 1 Y 1 B LYS 469 ? CE ? B LYS 26 CE 42 1 Y 1 B LYS 469 ? NZ ? B LYS 26 NZ 43 1 Y 1 B GLN 470 ? CG ? B GLN 27 CG 44 1 Y 1 B GLN 470 ? CD ? B GLN 27 CD 45 1 Y 1 B GLN 470 ? OE1 ? B GLN 27 OE1 46 1 Y 1 B GLN 470 ? NE2 ? B GLN 27 NE2 47 1 Y 1 B GLU 480 ? CG ? B GLU 37 CG 48 1 Y 1 B GLU 480 ? CD ? B GLU 37 CD 49 1 Y 1 B GLU 480 ? OE1 ? B GLU 37 OE1 50 1 Y 1 B GLU 480 ? OE2 ? B GLU 37 OE2 51 1 Y 1 B GLU 488 ? CG ? B GLU 45 CG 52 1 Y 1 B GLU 488 ? CD ? B GLU 45 CD 53 1 Y 1 B GLU 488 ? OE1 ? B GLU 45 OE1 54 1 Y 1 B GLU 488 ? OE2 ? B GLU 45 OE2 55 1 Y 1 B LYS 520 ? CE ? B LYS 77 CE 56 1 Y 1 B LYS 520 ? NZ ? B LYS 77 NZ 57 1 Y 1 B MSE 521 ? CE ? B MSE 78 CE 58 1 Y 1 B LEU 537 ? CG ? B LEU 94 CG 59 1 Y 1 B LEU 537 ? CD1 ? B LEU 94 CD1 60 1 Y 1 B LEU 537 ? CD2 ? B LEU 94 CD2 61 1 Y 1 B ARG 548 ? C ? B ARG 105 C 62 1 Y 1 B ARG 548 ? O ? B ARG 105 O # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 444 ? A SER 1 2 1 Y 1 A ASN 445 ? A ASN 2 3 1 Y 1 A GLN 546 ? A GLN 103 4 1 Y 1 A PRO 547 ? A PRO 104 5 1 Y 1 A ARG 548 ? A ARG 105 6 1 Y 1 A GLU 549 ? A GLU 106 7 1 Y 1 A LYS 550 ? A LYS 107 8 1 Y 1 A LYS 551 ? A LYS 108 9 1 Y 1 A ARG 552 ? A ARG 109 10 1 Y 1 A GLY 553 ? A GLY 110 11 1 Y 1 A THR 554 ? A THR 111 12 1 Y 1 A GLU 555 ? A GLU 112 13 1 Y 1 A LYS 556 ? A LYS 113 14 1 Y 1 B SER 444 ? B SER 1 15 1 Y 1 B ASN 445 ? B ASN 2 16 1 Y 1 B GLU 549 ? B GLU 106 17 1 Y 1 B LYS 550 ? B LYS 107 18 1 Y 1 B LYS 551 ? B LYS 108 19 1 Y 1 B ARG 552 ? B ARG 109 20 1 Y 1 B GLY 553 ? B GLY 110 21 1 Y 1 B THR 554 ? B THR 111 22 1 Y 1 B GLU 555 ? B GLU 112 23 1 Y 1 B LYS 556 ? B LYS 113 # _ndb_struct_conf_na.entry_id 6D12 _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C G 13 1_555 C C 7 1_555 -0.288 -0.148 0.039 -8.709 -12.926 2.237 1 C_G315:C309_C C 315 ? C 309 ? 19 1 1 C C 14 1_555 C G 6 1_555 0.250 -0.211 -0.249 -4.820 -12.050 3.224 2 C_C316:G308_C C 316 ? C 308 ? 19 1 1 C A 15 1_555 C U 5 1_555 0.193 -0.027 0.062 3.360 -4.710 11.101 3 C_A317:U307_C C 317 ? C 307 ? 20 1 1 C G 16 1_555 C C 4 1_555 -0.190 -0.038 0.236 4.641 -3.605 5.962 4 C_G318:C306_C C 318 ? C 306 ? 19 1 1 C C 17 1_555 C G 3 1_555 0.165 -0.204 0.051 5.174 -4.788 -0.016 5 C_C319:G305_C C 319 ? C 305 ? 19 1 1 C U 18 1_555 C G 2 1_555 2.696 -0.335 -0.138 2.029 -8.996 11.976 6 C_U320:G304_C C 320 ? C 304 ? 28 1 1 C C 19 1_555 C G 1 1_555 0.163 -0.029 0.049 -6.156 -9.011 5.321 7 C_C321:G303_C C 321 ? C 303 ? 19 1 1 C G 20 1_555 C C 38 1_555 1.501 0.575 0.357 6.643 -9.968 2.356 8 C_G322:C340_C C 322 ? C 340 ? ? 1 1 C G 21 1_555 C U 37 1_555 0.791 -0.017 -0.158 5.006 -9.060 -2.308 9 C_G323:U339_C C 323 ? C 339 ? ? 1 1 C G 22 1_555 C C 36 1_555 -0.220 -0.215 -0.075 2.119 -0.992 2.769 10 C_G324:C338_C C 324 ? C 338 ? 19 1 1 C C 23 1_555 C G 35 1_555 0.150 -0.226 -0.181 -1.911 -3.799 -1.327 11 C_C325:G337_C C 325 ? C 337 ? 19 1 1 C U 24 1_555 C A 34 1_555 0.004 -0.126 0.334 -6.271 -8.694 1.985 12 C_U326:A336_C C 326 ? C 336 ? 20 1 1 C G 25 1_555 C C 33 1_555 -0.141 -0.209 0.713 -0.214 -5.912 2.270 13 C_G327:C335_C C 327 ? C 335 ? 19 1 1 C C 26 1_555 C G 32 1_555 0.171 -0.261 0.434 4.793 -9.520 -7.247 14 C_C328:G334_C C 328 ? C 334 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C G 13 1_555 C C 7 1_555 C C 14 1_555 C G 6 1_555 -0.567 -1.965 3.315 2.788 1.728 29.882 -4.139 1.659 3.135 3.338 -5.387 30.058 1 CC_G315C316:G308C309_CC C 315 ? C 309 ? C 316 ? C 308 ? 1 C C 14 1_555 C G 6 1_555 C A 15 1_555 C U 5 1_555 0.564 -1.507 2.953 -3.259 13.170 27.025 -5.017 -1.608 1.945 26.191 6.481 30.182 2 CC_C316A317:U307G308_CC C 316 ? C 308 ? C 317 ? C 307 ? 1 C A 15 1_555 C U 5 1_555 C G 16 1_555 C C 4 1_555 -0.204 -1.333 3.164 -0.952 4.049 29.099 -3.445 0.209 2.961 8.007 1.882 29.389 3 CC_A317G318:C306U307_CC C 317 ? C 307 ? C 318 ? C 306 ? 1 C G 16 1_555 C C 4 1_555 C C 17 1_555 C G 3 1_555 0.073 -1.851 3.159 1.245 8.630 27.898 -5.330 0.094 2.487 17.370 -2.505 29.203 4 CC_G318C319:G305C306_CC C 318 ? C 306 ? C 319 ? C 305 ? 1 C C 17 1_555 C G 3 1_555 C U 18 1_555 C G 2 1_555 0.946 -1.070 3.051 8.350 9.780 45.514 -2.077 -0.549 2.896 12.353 -10.547 47.202 5 CC_C319U320:G304G305_CC C 319 ? C 305 ? C 320 ? C 304 ? 1 C U 18 1_555 C G 2 1_555 C C 19 1_555 C G 1 1_555 0.211 -1.647 2.701 7.927 17.116 25.658 -5.189 0.623 1.372 33.394 -15.466 31.751 6 CC_U320C321:G303G304_CC C 320 ? C 304 ? C 321 ? C 303 ? 1 C C 19 1_555 C G 1 1_555 C G 20 1_555 C C 38 1_555 -0.791 -1.163 2.718 -2.190 8.641 27.929 -3.773 1.191 2.316 17.352 4.398 29.291 7 CC_C321G322:C340G303_CC C 321 ? C 303 ? C 322 ? C 340 ? 1 C G 20 1_555 C C 38 1_555 C G 21 1_555 C U 37 1_555 -1.174 -2.411 3.157 1.698 2.631 24.974 -6.239 3.151 2.808 6.053 -3.906 25.166 8 CC_G322G323:U339C340_CC C 322 ? C 340 ? C 323 ? C 339 ? 1 C G 21 1_555 C U 37 1_555 C G 22 1_555 C C 36 1_555 -0.522 -2.131 2.956 -10.359 16.689 32.527 -4.963 -0.238 1.777 26.952 16.729 37.861 9 CC_G323G324:C338U339_CC C 323 ? C 339 ? C 324 ? C 338 ? 1 C G 22 1_555 C C 36 1_555 C C 23 1_555 C G 35 1_555 -0.611 -1.512 3.232 -0.964 5.560 39.611 -2.822 0.787 3.014 8.154 1.414 39.995 10 CC_G324C325:G337C338_CC C 324 ? C 338 ? C 325 ? C 337 ? 1 C C 23 1_555 C G 35 1_555 C U 24 1_555 C A 34 1_555 0.159 -2.223 3.368 1.559 8.606 23.183 -7.569 0.061 2.405 20.502 -3.713 24.757 11 CC_C325U326:A336G337_CC C 325 ? C 337 ? C 326 ? C 336 ? 1 C U 24 1_555 C A 34 1_555 C G 25 1_555 C C 33 1_555 -0.215 -1.145 3.028 -2.004 7.823 32.377 -3.151 0.078 2.694 13.764 3.525 33.343 12 CC_U326G327:C335A336_CC C 326 ? C 336 ? C 327 ? C 335 ? 1 C G 25 1_555 C C 33 1_555 C C 26 1_555 C G 32 1_555 0.064 -1.720 3.131 2.494 0.206 34.247 -2.944 0.265 3.118 0.349 -4.228 34.336 13 CC_G327C328:G334C335_CC C 327 ? C 335 ? C 328 ? C 334 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Human Genome Research Institute (NIH/NHGRI)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number GM107567 _pdbx_audit_support.ordinal 1 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'native gel electrophoresis' 'native gel electrophoresis showed a reduced mobility that saturated at a ratio of 2:1 showing that 2 proteins bind 1 RNA molecule' 2 1 'light scattering' ;Dynamic light scattering experiments indicated that the RNA-protein complex was the correct molecular weight, indicating that the complex formed a homogeneous sample and did not aggregate. ; #