HEADER BLOOD CLOTTING 17-APR-18 6D3Z TITLE PROTEASE SFTI COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLASMINOGEN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 565-810; COMPND 5 SYNONYM: MICROPLASMIN; COMPND 6 EC: 3.4.21.7; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: TRYPSIN INHIBITOR 1; COMPND 10 CHAIN: C; COMPND 11 FRAGMENT: UNP RESIDUES 40-53; COMPND 12 SYNONYM: SFTI-1; COMPND 13 ENGINEERED: YES; COMPND 14 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PLG; SOURCE 6 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HELIANTHUS ANNUUS; SOURCE 11 ORGANISM_COMMON: COMMON SUNFLOWER; SOURCE 12 ORGANISM_TAXID: 4232 KEYWDS PROTEASES, SFTI, COMPLEX, FIBRINOLYSIS, BLOOD CLOTTING EXPDTA X-RAY DIFFRACTION AUTHOR R.H.P.LAW,G.WU REVDAT 3 04-OCT-23 6D3Z 1 REMARK REVDAT 2 01-MAY-19 6D3Z 1 JRNL REVDAT 1 23-JAN-19 6D3Z 0 JRNL AUTH J.E.SWEDBERG,G.WU,T.MAHATMANTO,T.DUREK,T.T.CARADOC-DAVIES, JRNL AUTH 2 J.C.WHISSTOCK,R.H.P.LAW,D.J.CRAIK JRNL TITL HIGHLY POTENT AND SELECTIVE PLASMIN INHIBITORS BASED ON THE JRNL TITL 2 SUNFLOWER TRYPSIN INHIBITOR-1 SCAFFOLD ATTENUATE JRNL TITL 3 FIBRINOLYSIS IN PLASMA. JRNL REF J. MED. CHEM. V. 62 552 2019 JRNL REFN ISSN 1520-4804 JRNL PMID 30520638 JRNL DOI 10.1021/ACS.JMEDCHEM.8B01139 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 23609 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 1170 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.9182 - 3.9990 1.00 2926 130 0.1387 0.1442 REMARK 3 2 3.9990 - 3.1746 1.00 2845 128 0.1370 0.1632 REMARK 3 3 3.1746 - 2.7734 1.00 2788 158 0.1516 0.2110 REMARK 3 4 2.7734 - 2.5199 1.00 2744 180 0.1725 0.2134 REMARK 3 5 2.5199 - 2.3393 1.00 2812 146 0.1689 0.2205 REMARK 3 6 2.3393 - 2.2014 1.00 2789 136 0.2154 0.2572 REMARK 3 7 2.2014 - 2.0911 1.00 2772 139 0.2008 0.2446 REMARK 3 8 2.0911 - 2.0001 1.00 2763 153 0.2730 0.3133 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.840 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.17 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 546 THROUGH 566 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.8797 84.1732 15.9632 REMARK 3 T TENSOR REMARK 3 T11: 0.1593 T22: 0.1489 REMARK 3 T33: 0.2529 T12: 0.0424 REMARK 3 T13: -0.0043 T23: 0.0284 REMARK 3 L TENSOR REMARK 3 L11: 0.6486 L22: 1.4819 REMARK 3 L33: 1.3865 L12: 0.6741 REMARK 3 L13: -0.0435 L23: -0.3379 REMARK 3 S TENSOR REMARK 3 S11: -0.1274 S12: 0.0091 S13: -0.6127 REMARK 3 S21: 0.1539 S22: -0.0166 S23: -0.3125 REMARK 3 S31: 0.2005 S32: 0.3369 S33: 0.1098 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 567 THROUGH 594 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.2214 97.2443 16.9203 REMARK 3 T TENSOR REMARK 3 T11: 0.1648 T22: 0.0714 REMARK 3 T33: 0.1029 T12: -0.0183 REMARK 3 T13: 0.0031 T23: 0.0019 REMARK 3 L TENSOR REMARK 3 L11: 2.9654 L22: 1.7996 REMARK 3 L33: 1.1667 L12: -0.9003 REMARK 3 L13: -0.3441 L23: 1.3228 REMARK 3 S TENSOR REMARK 3 S11: -0.0003 S12: -0.1138 S13: 0.0489 REMARK 3 S21: 0.1418 S22: 0.0538 S23: -0.0305 REMARK 3 S31: -0.2048 S32: 0.0658 S33: -0.0553 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 595 THROUGH 630 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.4178 103.4049 15.0193 REMARK 3 T TENSOR REMARK 3 T11: 0.2723 T22: 0.1037 REMARK 3 T33: 0.1860 T12: -0.0213 REMARK 3 T13: -0.0254 T23: -0.0248 REMARK 3 L TENSOR REMARK 3 L11: 1.2539 L22: 2.0590 REMARK 3 L33: 0.7461 L12: 0.3216 REMARK 3 L13: -0.0422 L23: -0.8443 REMARK 3 S TENSOR REMARK 3 S11: -0.1596 S12: -0.0897 S13: 0.2597 REMARK 3 S21: 0.2711 S22: 0.0782 S23: -0.0977 REMARK 3 S31: -0.5105 S32: 0.1213 S33: -0.0068 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 631 THROUGH 684 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.4431 96.5655 6.2120 REMARK 3 T TENSOR REMARK 3 T11: 0.1506 T22: 0.1001 REMARK 3 T33: 0.1241 T12: -0.0222 REMARK 3 T13: 0.0316 T23: 0.0064 REMARK 3 L TENSOR REMARK 3 L11: 1.5094 L22: 1.8867 REMARK 3 L33: 1.4722 L12: 0.2768 REMARK 3 L13: 0.2358 L23: -0.1394 REMARK 3 S TENSOR REMARK 3 S11: -0.0048 S12: 0.0384 S13: 0.1445 REMARK 3 S21: -0.0061 S22: 0.0005 S23: -0.1652 REMARK 3 S31: -0.2233 S32: 0.2161 S33: 0.0218 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 685 THROUGH 697 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.1310 89.5916 22.8037 REMARK 3 T TENSOR REMARK 3 T11: 0.2307 T22: 0.1032 REMARK 3 T33: 0.1254 T12: 0.0044 REMARK 3 T13: 0.0794 T23: -0.0110 REMARK 3 L TENSOR REMARK 3 L11: 8.0672 L22: 3.9161 REMARK 3 L33: 3.7935 L12: 4.0565 REMARK 3 L13: 2.2471 L23: 0.6560 REMARK 3 S TENSOR REMARK 3 S11: -0.0315 S12: -0.4050 S13: -0.1368 REMARK 3 S21: 0.2885 S22: -0.0562 S23: 0.0468 REMARK 3 S31: 0.0895 S32: -0.4047 S33: 0.0305 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 698 THROUGH 791 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.5346 87.8680 3.6955 REMARK 3 T TENSOR REMARK 3 T11: 0.1112 T22: 0.0492 REMARK 3 T33: 0.1025 T12: 0.0017 REMARK 3 T13: 0.0175 T23: 0.0031 REMARK 3 L TENSOR REMARK 3 L11: 1.3255 L22: 1.6363 REMARK 3 L33: 1.3461 L12: 0.4721 REMARK 3 L13: 0.1357 L23: -0.0305 REMARK 3 S TENSOR REMARK 3 S11: -0.0024 S12: 0.1127 S13: 0.0014 REMARK 3 S21: -0.1122 S22: 0.0562 S23: -0.0027 REMARK 3 S31: 0.0372 S32: 0.0222 S33: -0.0414 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 14 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.0991 97.4759 9.0978 REMARK 3 T TENSOR REMARK 3 T11: 0.2818 T22: 0.1688 REMARK 3 T33: 0.2726 T12: 0.0820 REMARK 3 T13: 0.0419 T23: 0.0306 REMARK 3 L TENSOR REMARK 3 L11: 7.0280 L22: 5.3948 REMARK 3 L33: 6.9388 L12: -0.5488 REMARK 3 L13: 1.9254 L23: -0.6543 REMARK 3 S TENSOR REMARK 3 S11: -0.0884 S12: -0.4309 S13: 0.4527 REMARK 3 S21: 0.2687 S22: -0.0252 S23: 0.8051 REMARK 3 S31: -0.7601 S32: -0.7882 S33: 0.0802 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6D3Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-APR-18. REMARK 100 THE DEPOSITION ID IS D_1000233917. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4-6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.22 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23643 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 105.593 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 21.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.27700 REMARK 200 FOR THE DATA SET : 11.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 21.00 REMARK 200 R MERGE FOR SHELL (I) : 1.34900 REMARK 200 R SYM FOR SHELL (I) : 1.34900 REMARK 200 FOR SHELL : 0.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRIES 5UGG & 1SFI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE, 1 M SODIUM REMARK 280 FORMATE, PH 4.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 20.27400 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 20.27400 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 20.27400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 975 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 561 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 557 CG CD CE NZ REMARK 470 LYS A 607 CE NZ REMARK 470 HIS A 629 CG ND1 CD2 CE1 NE2 REMARK 470 GLN A 738 CG CD OE1 NE2 REMARK 470 GLU A 749 CG CD OE1 OE2 REMARK 470 LYS A 750 CG CD CE NZ REMARK 470 ARG A 789 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N GLY C 1 C ASN C 14 1.40 REMARK 500 O SER A 608 OH TYR A 614 2.09 REMARK 500 O HOH A 898 O HOH A 952 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 558 57.64 -144.94 REMARK 500 GLU A 627 155.89 -46.95 REMARK 500 ARG A 644 30.09 70.36 REMARK 500 PHE A 715 -103.90 -111.57 REMARK 500 LYS A 750 -76.71 62.32 REMARK 500 ASP A 751 15.57 -144.16 REMARK 500 SER A 760 -70.66 -130.01 REMARK 500 REMARK 500 REMARK: NULL DBREF 6D3Z A 546 791 UNP P00747 PLMN_HUMAN 565 810 DBREF 6D3Z C 1 14 UNP Q4GWU5 SFTI1_HELAN 40 53 SEQADV 6D3Z ALA A 741 UNP P00747 SER 760 CONFLICT SEQADV 6D3Z TYR C 4 UNP Q4GWU5 THR 43 ENGINEERED MUTATION SEQADV 6D3Z ARG C 7 UNP Q4GWU5 ILE 46 ENGINEERED MUTATION SEQADV 6D3Z ASN C 14 UNP Q4GWU5 ASP 53 ENGINEERED MUTATION SEQRES 1 A 246 PHE ASP CYS GLY LYS PRO GLN VAL GLU PRO LYS LYS CYS SEQRES 2 A 246 PRO GLY ARG VAL VAL GLY GLY CYS VAL ALA HIS PRO HIS SEQRES 3 A 246 SER TRP PRO TRP GLN VAL SER LEU ARG THR ARG PHE GLY SEQRES 4 A 246 MET HIS PHE CYS GLY GLY THR LEU ILE SER PRO GLU TRP SEQRES 5 A 246 VAL LEU THR ALA ALA HIS CYS LEU GLU LYS SER PRO ARG SEQRES 6 A 246 PRO SER SER TYR LYS VAL ILE LEU GLY ALA HIS GLN GLU SEQRES 7 A 246 VAL ASN LEU GLU PRO HIS VAL GLN GLU ILE GLU VAL SER SEQRES 8 A 246 ARG LEU PHE LEU GLU PRO THR ARG LYS ASP ILE ALA LEU SEQRES 9 A 246 LEU LYS LEU SER SER PRO ALA VAL ILE THR ASP LYS VAL SEQRES 10 A 246 ILE PRO ALA CYS LEU PRO SER PRO ASN TYR VAL VAL ALA SEQRES 11 A 246 ASP ARG THR GLU CYS PHE ILE THR GLY TRP GLY GLU THR SEQRES 12 A 246 GLN GLY THR PHE GLY ALA GLY LEU LEU LYS GLU ALA GLN SEQRES 13 A 246 LEU PRO VAL ILE GLU ASN LYS VAL CYS ASN ARG TYR GLU SEQRES 14 A 246 PHE LEU ASN GLY ARG VAL GLN SER THR GLU LEU CYS ALA SEQRES 15 A 246 GLY HIS LEU ALA GLY GLY THR ASP SER CYS GLN GLY ASP SEQRES 16 A 246 ALA GLY GLY PRO LEU VAL CYS PHE GLU LYS ASP LYS TYR SEQRES 17 A 246 ILE LEU GLN GLY VAL THR SER TRP GLY LEU GLY CYS ALA SEQRES 18 A 246 ARG PRO ASN LYS PRO GLY VAL TYR VAL ARG VAL SER ARG SEQRES 19 A 246 PHE VAL THR TRP ILE GLU GLY VAL MET ARG ASN ASN SEQRES 1 C 14 GLY ARG CYS TYR LYS SER ARG PRO PRO ILE CYS PHE PRO SEQRES 2 C 14 ASN FORMUL 3 HOH *180(H2 O) HELIX 1 AA1 ALA A 601 LEU A 605 5 5 HELIX 2 AA2 ARG A 610 SER A 613 5 4 HELIX 3 AA3 GLU A 706 ASN A 711 1 6 HELIX 4 AA4 PHE A 780 ASN A 791 1 12 SHEET 1 AA1 7 CYS A 566 VAL A 567 0 SHEET 2 AA1 7 LYS A 698 ILE A 705 -1 O GLU A 699 N CYS A 566 SHEET 3 AA1 7 GLU A 679 GLY A 684 -1 N CYS A 680 O LEU A 702 SHEET 4 AA1 7 PRO A 744 GLU A 749 -1 O VAL A 746 N PHE A 681 SHEET 5 AA1 7 LYS A 752 LEU A 763 -1 O LYS A 752 N GLU A 749 SHEET 6 AA1 7 ARG C 2 TYR C 4 -1 O CYS C 3 N GLY A 762 SHEET 7 AA1 7 ILE C 10 CYS C 11 -1 O ILE C 10 N TYR C 4 SHEET 1 AA2 7 CYS A 566 VAL A 567 0 SHEET 2 AA2 7 LYS A 698 ILE A 705 -1 O GLU A 699 N CYS A 566 SHEET 3 AA2 7 GLU A 724 ALA A 727 -1 O CYS A 726 N ILE A 705 SHEET 4 AA2 7 GLY A 772 ARG A 776 -1 O TYR A 774 N LEU A 725 SHEET 5 AA2 7 LYS A 752 LEU A 763 -1 N TRP A 761 O VAL A 773 SHEET 6 AA2 7 ARG C 2 TYR C 4 -1 O CYS C 3 N GLY A 762 SHEET 7 AA2 7 ILE C 10 CYS C 11 -1 O ILE C 10 N TYR C 4 SHEET 1 AA3 7 GLN A 576 ARG A 580 0 SHEET 2 AA3 7 HIS A 586 SER A 594 -1 O CYS A 588 N LEU A 579 SHEET 3 AA3 7 TRP A 597 THR A 600 -1 O LEU A 599 N THR A 591 SHEET 4 AA3 7 ALA A 648 LEU A 652 -1 O LEU A 650 N VAL A 598 SHEET 5 AA3 7 GLN A 631 LEU A 640 -1 N PHE A 639 O LEU A 649 SHEET 6 AA3 7 LYS A 615 LEU A 618 -1 N LEU A 618 O GLN A 631 SHEET 7 AA3 7 GLN A 576 ARG A 580 -1 N ARG A 580 O LYS A 615 SSBOND 1 CYS A 548 CYS A 666 1555 1555 2.08 SSBOND 2 CYS A 558 CYS A 566 1555 1555 2.07 SSBOND 3 CYS A 588 CYS A 604 1555 1555 2.05 SSBOND 4 CYS A 680 CYS A 747 1555 1555 2.03 SSBOND 5 CYS A 710 CYS A 726 1555 1555 2.02 SSBOND 6 CYS A 737 CYS A 765 1555 1555 2.07 SSBOND 7 CYS C 3 CYS C 11 1555 1555 2.05 CISPEP 1 ARG C 7 PRO C 8 0 -6.39 CRYST1 121.928 121.928 40.548 90.00 90.00 120.00 P 63 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008202 0.004735 0.000000 0.00000 SCALE2 0.000000 0.009470 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024662 0.00000