HEADER OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR 18-APR-18 6D4T TITLE M. THERMORESISTIBLE GUAB2 DELTA-CBS IN COMPLEX WITH INHIBITOR COMPOUND TITLE 2 45 (VCC117054) COMPND MOL_ID: 1; COMPND 2 MOLECULE: INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE,INOSINE-5'- COMPND 3 MONOPHOSPHATE DEHYDROGENASE; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: IMPDH,IMPDH; COMPND 6 EC: 1.1.1.205,1.1.1.205; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM THERMORESISTIBILE; SOURCE 3 ORGANISM_TAXID: 1078020; SOURCE 4 STRAIN: ATCC 19527 / DSM 44167 / CIP 105390 / JCM 6362 / NCTC 10409 SOURCE 5 / 316; SOURCE 6 GENE: GUAB, KEK_23061; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS COMPLEX, FRAGMENT, IMPDH, OXIDOREDUCTASE, OXIDOREDUCTASE- KEYWDS 2 OXIDOREDUCTASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.B.ASCHER,A.PACITTO,T.L.BLUNDELL REVDAT 4 04-OCT-23 6D4T 1 REMARK REVDAT 3 08-JAN-20 6D4T 1 REMARK REVDAT 2 22-MAY-19 6D4T 1 JRNL REVDAT 1 01-MAY-19 6D4T 0 JRNL AUTH V.SINGH,A.PACITTO,S.DONINI,D.M.FERRARIS,S.BOROS,E.ILLYES, JRNL AUTH 2 B.SZOKOL,M.RIZZI,T.L.BLUNDELL,D.B.ASCHER,J.PATO,V.MIZRAHI JRNL TITL SYNTHESIS AND STRUCTURE-ACTIVITY RELATIONSHIP OF JRNL TITL 2 1-(5-ISOQUINOLINESULFONYL)PIPERAZINE ANALOGUES AS INHIBITORS JRNL TITL 3 OF MYCOBACTERIUM TUBERCULOSIS IMPDH. JRNL REF EUR.J.MED.CHEM. V. 174 309 2019 JRNL REFN ISSN 0223-5234 JRNL PMID 31055147 JRNL DOI 10.1016/J.EJMECH.2019.04.027 REMARK 2 REMARK 2 RESOLUTION. 1.54 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.54 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 61.18 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 48275 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.187 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.280 REMARK 3 FREE R VALUE TEST SET COUNT : 2547 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 61.2254 - 4.0362 1.00 2606 143 0.1496 0.1535 REMARK 3 2 4.0362 - 3.2037 1.00 2551 151 0.1442 0.1588 REMARK 3 3 3.2037 - 2.7987 1.00 2518 167 0.1598 0.1951 REMARK 3 4 2.7987 - 2.5428 1.00 2573 125 0.1653 0.1641 REMARK 3 5 2.5428 - 2.3605 1.00 2560 103 0.1619 0.2104 REMARK 3 6 2.3605 - 2.2214 1.00 2513 173 0.1578 0.2016 REMARK 3 7 2.2214 - 2.1101 1.00 2489 183 0.1604 0.1850 REMARK 3 8 2.1101 - 2.0182 1.00 2588 127 0.1690 0.1878 REMARK 3 9 2.0182 - 1.9405 1.00 2491 169 0.1681 0.2147 REMARK 3 10 1.9405 - 1.8736 1.00 2524 144 0.1683 0.2329 REMARK 3 11 1.8736 - 1.8150 1.00 2570 136 0.1759 0.1930 REMARK 3 12 1.8150 - 1.7631 1.00 2502 146 0.1751 0.2036 REMARK 3 13 1.7631 - 1.7167 1.00 2547 122 0.1919 0.2134 REMARK 3 14 1.7167 - 1.6748 1.00 2529 146 0.2270 0.2710 REMARK 3 15 1.6748 - 1.6367 1.00 2517 161 0.2346 0.2703 REMARK 3 16 1.6367 - 1.6019 1.00 2584 110 0.2361 0.2555 REMARK 3 17 1.6019 - 1.5698 1.00 2531 103 0.2550 0.2525 REMARK 3 18 1.5698 - 1.5402 1.00 2535 138 0.2715 0.3132 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.850 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2412 REMARK 3 ANGLE : 1.195 3302 REMARK 3 CHIRALITY : 0.047 408 REMARK 3 PLANARITY : 0.006 422 REMARK 3 DIHEDRAL : 16.893 840 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6D4T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-APR-18. REMARK 100 THE DEPOSITION ID IS D_1000233998. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9686 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48275 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.540 REMARK 200 RESOLUTION RANGE LOW (A) : 61.180 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.54 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.60 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5J5R REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM ACETATE, CALCIUM CHLORIDE, ISO REMARK 280 -PROPANOL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 44.35500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 44.35500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 42.24000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 44.35500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 44.35500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 42.24000 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 44.35500 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 44.35500 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 42.24000 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 44.35500 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 44.35500 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 42.24000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 42740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -96.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 88.71000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 266.13000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 177.42000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 88.71000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 -88.71000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 177.42000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 SER A 2 REMARK 465 SER A 3 REMARK 465 ILE A 4 REMARK 465 ALA A 5 REMARK 465 GLU A 6 REMARK 465 ARG A 7 REMARK 465 SER A 8 REMARK 465 VAL A 9 REMARK 465 PRO A 10 REMARK 465 ILE A 11 REMARK 465 ALA A 12 REMARK 465 VAL A 13 REMARK 465 PRO A 14 REMARK 465 GLY A 292 REMARK 465 ARG A 293 REMARK 465 GLY A 294 REMARK 465 GLY A 295 REMARK 465 ALA A 296 REMARK 465 LYS A 297 REMARK 465 SER A 298 REMARK 465 TYR A 299 REMARK 465 SER A 300 REMARK 465 LYS A 301 REMARK 465 ASP A 302 REMARK 465 ARG A 303 REMARK 465 TYR A 304 REMARK 465 PHE A 305 REMARK 465 GLN A 306 REMARK 465 ASP A 307 REMARK 465 ASP A 308 REMARK 465 ALA A 309 REMARK 465 LEU A 310 REMARK 465 SER A 311 REMARK 465 GLU A 312 REMARK 465 ASP A 313 REMARK 465 LYS A 314 REMARK 465 LEU A 369 REMARK 465 LYS A 370 REMARK 465 GLU A 371 REMARK 465 SER A 372 REMARK 465 HIS A 373 REMARK 465 PRO A 374 REMARK 465 HIS A 375 REMARK 465 ASP A 376 REMARK 465 ILE A 377 REMARK 465 THR A 378 REMARK 465 MET A 379 REMARK 465 THR A 380 REMARK 465 VAL A 381 REMARK 465 GLU A 382 REMARK 465 ALA A 383 REMARK 465 PRO A 384 REMARK 465 ASN A 385 REMARK 465 TYR A 386 REMARK 465 TYR A 387 REMARK 465 ALA A 388 REMARK 465 ARG A 389 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 43 CG OD1 OD2 REMARK 470 LYS A 62 CE NZ REMARK 470 GLU A 105 CG CD OE1 OE2 REMARK 470 ASP A 123 CG OD1 OD2 REMARK 470 ASP A 124 CG OD1 OD2 REMARK 470 GLU A 127 CG CD OE1 OE2 REMARK 470 ARG A 150 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 165 CG OD1 OD2 REMARK 470 GLU A 166 CG CD OE1 OE2 REMARK 470 GLU A 185 CG CD OE1 OE2 REMARK 470 GLU A 269 CG CD OE1 OE2 REMARK 470 ASN A 274 CG OD1 ND2 REMARK 470 LYS A 276 CG CD CE NZ REMARK 470 LEU A 287 CG CD1 CD2 REMARK 470 GLN A 291 CG CD OE1 NE2 REMARK 470 GLU A 321 CG CD OE1 OE2 REMARK 470 ARG A 327 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 592 O HOH A 769 1.81 REMARK 500 O HOH A 695 O HOH A 733 1.82 REMARK 500 O HOH A 566 O HOH A 701 1.83 REMARK 500 OE1 GLN A 358 O HOH A 501 1.83 REMARK 500 O HOH A 644 O HOH A 776 1.85 REMARK 500 NE ARG A 323 O HOH A 502 1.86 REMARK 500 O HOH A 544 O HOH A 723 1.86 REMARK 500 O HOH A 698 O HOH A 717 1.88 REMARK 500 O HOH A 723 O HOH A 778 2.00 REMARK 500 NE2 GLN A 358 O HOH A 501 2.09 REMARK 500 NE2 GLN A 213 O HOH A 503 2.11 REMARK 500 O HOH A 516 O HOH A 729 2.13 REMARK 500 O HOH A 627 O HOH A 743 2.15 REMARK 500 CD GLN A 358 O HOH A 501 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 707 O HOH A 731 4475 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 73 -53.23 -126.67 REMARK 500 GLU A 75 -163.88 -118.66 REMARK 500 ALA A 175 10.00 -147.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 798 DISTANCE = 6.13 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IMP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FWS A 402 DBREF 6D4T A 3 110 UNP G7CNL4 G7CNL4_MYCT3 2 109 DBREF 6D4T A 113 389 UNP G7CNL4 G7CNL4_MYCT3 237 513 SEQADV 6D4T GLY A 1 UNP G7CNL4 EXPRESSION TAG SEQADV 6D4T SER A 2 UNP G7CNL4 EXPRESSION TAG SEQADV 6D4T GLY A 111 UNP G7CNL4 LINKER SEQADV 6D4T GLY A 112 UNP G7CNL4 LINKER SEQRES 1 A 389 GLY SER SER ILE ALA GLU ARG SER VAL PRO ILE ALA VAL SEQRES 2 A 389 PRO VAL PRO THR GLY GLY ASP ASP PRO THR LYS ILE ALA SEQRES 3 A 389 MET LEU GLY LEU THR PHE ASP ASP VAL LEU LEU LEU PRO SEQRES 4 A 389 ALA ALA SER ASP VAL LEU PRO ALA ASN ALA ASP THR SER SEQRES 5 A 389 SER GLN LEU THR LYS LYS ILE ARG LEU LYS VAL PRO LEU SEQRES 6 A 389 VAL SER SER ALA MET ASP THR VAL THR GLU ALA ARG MET SEQRES 7 A 389 ALA ILE ALA MET ALA ARG ALA GLY GLY MET GLY VAL LEU SEQRES 8 A 389 HIS ARG ASN LEU PRO VAL ALA GLU GLN ALA ALA GLN VAL SEQRES 9 A 389 GLU THR VAL LYS ARG SER GLY GLY LEU LEU VAL GLY ALA SEQRES 10 A 389 ALA VAL GLY VAL GLY ASP ASP ALA TRP GLU ARG ALA MET SEQRES 11 A 389 ALA LEU ARG ASP ALA GLY VAL ASP VAL LEU VAL VAL ASP SEQRES 12 A 389 THR ALA HIS ALA HIS ASN ARG LYS VAL LEU ASP MET VAL SEQRES 13 A 389 HIS ARG LEU LYS THR THR VAL GLY ASP GLU ILE GLU VAL SEQRES 14 A 389 VAL GLY GLY ASN VAL ALA THR ARG ALA ALA ALA ALA ALA SEQRES 15 A 389 LEU VAL GLU ALA GLY ALA ASP ALA VAL LYS VAL GLY VAL SEQRES 16 A 389 GLY PRO GLY SER ILE CYS THR THR ARG VAL VAL ALA GLY SEQRES 17 A 389 VAL GLY ALA PRO GLN ILE THR ALA ILE LEU GLU ALA VAL SEQRES 18 A 389 ALA ALA CYS ALA PRO HIS GLY VAL PRO VAL ILE ALA ASP SEQRES 19 A 389 GLY GLY LEU GLN TYR SER GLY ASP ILE ALA LYS ALA LEU SEQRES 20 A 389 ALA ALA GLY ALA SER THR ALA MET LEU GLY SER LEU LEU SEQRES 21 A 389 ALA GLY THR ALA GLU SER PRO GLY GLU LEU ILE LEU VAL SEQRES 22 A 389 ASN GLY LYS GLN PHE LYS SER TYR ARG GLY MET GLY SER SEQRES 23 A 389 LEU GLY ALA MET GLN GLY ARG GLY GLY ALA LYS SER TYR SEQRES 24 A 389 SER LYS ASP ARG TYR PHE GLN ASP ASP ALA LEU SER GLU SEQRES 25 A 389 ASP LYS LEU VAL PRO GLU GLY ILE GLU GLY ARG VAL PRO SEQRES 26 A 389 PHE ARG GLY PRO LEU SER THR VAL ILE HIS GLN LEU VAL SEQRES 27 A 389 GLY GLY LEU ARG ALA ALA MET GLY TYR THR GLY SER ALA SEQRES 28 A 389 THR ILE GLU GLU LEU GLN GLN ALA GLN PHE VAL GLN ILE SEQRES 29 A 389 THR ALA ALA GLY LEU LYS GLU SER HIS PRO HIS ASP ILE SEQRES 30 A 389 THR MET THR VAL GLU ALA PRO ASN TYR TYR ALA ARG HET IMP A 401 23 HET FWS A 402 32 HETNAM IMP INOSINIC ACID HETNAM FWS (2S)-N-(2H-1,3-BENZODIOXOL-5-YL)-4-[(ISOQUINOLIN-5-YL) HETNAM 2 FWS SULFONYL]-2-METHYLPIPERAZINE-1-CARBOXAMIDE FORMUL 2 IMP C10 H13 N4 O8 P FORMUL 3 FWS C22 H22 N4 O5 S FORMUL 4 HOH *298(H2 O) HELIX 1 AA1 THR A 31 ASP A 33 5 3 HELIX 2 AA2 LEU A 45 ALA A 49 5 5 HELIX 3 AA3 GLU A 75 ALA A 85 1 11 HELIX 4 AA4 PRO A 96 SER A 110 1 15 HELIX 5 AA5 ASP A 124 GLY A 136 1 13 HELIX 6 AA6 ASN A 149 GLY A 164 1 16 HELIX 7 AA7 THR A 176 GLY A 187 1 12 HELIX 8 AA8 THR A 202 ALA A 207 1 6 HELIX 9 AA9 PRO A 212 ALA A 225 1 14 HELIX 10 AB1 PRO A 226 GLY A 228 5 3 HELIX 11 AB2 TYR A 239 ALA A 249 1 11 HELIX 12 AB3 GLY A 257 GLY A 262 1 6 HELIX 13 AB4 SER A 286 GLN A 291 1 6 HELIX 14 AB5 PRO A 329 GLY A 349 1 21 HELIX 15 AB6 THR A 352 GLN A 357 1 6 SHEET 1 AA1 2 VAL A 35 LEU A 37 0 SHEET 2 AA1 2 PHE A 361 GLN A 363 -1 O VAL A 362 N LEU A 36 SHEET 1 AA2 2 SER A 53 GLN A 54 0 SHEET 2 AA2 2 ARG A 60 LEU A 61 -1 O LEU A 61 N SER A 53 SHEET 1 AA3 9 LEU A 65 SER A 67 0 SHEET 2 AA3 9 MET A 88 LEU A 91 1 O MET A 88 N SER A 67 SHEET 3 AA3 9 GLY A 116 VAL A 119 1 O ALA A 118 N LEU A 91 SHEET 4 AA3 9 VAL A 139 ASP A 143 1 O ASP A 143 N VAL A 119 SHEET 5 AA3 9 GLU A 168 VAL A 174 1 O VAL A 170 N VAL A 142 SHEET 6 AA3 9 ALA A 190 VAL A 193 1 O LYS A 192 N GLY A 171 SHEET 7 AA3 9 VAL A 231 ASP A 234 1 O ILE A 232 N VAL A 193 SHEET 8 AA3 9 THR A 253 LEU A 256 1 O THR A 253 N ALA A 233 SHEET 9 AA3 9 LEU A 65 SER A 67 1 N VAL A 66 O ALA A 254 SHEET 1 AA4 3 LEU A 270 VAL A 273 0 SHEET 2 AA4 3 LYS A 276 ARG A 282 -1 O PHE A 278 N ILE A 271 SHEET 3 AA4 3 GLU A 321 PRO A 325 -1 O GLY A 322 N TYR A 281 CISPEP 1 GLY A 172 ASN A 173 0 -1.87 SITE 1 AC1 26 SER A 68 MET A 70 ASN A 173 GLY A 198 SITE 2 AC1 26 SER A 199 ILE A 200 CYS A 201 ASP A 234 SITE 3 AC1 26 GLY A 235 GLY A 236 MET A 255 GLY A 257 SITE 4 AC1 26 SER A 258 TYR A 281 GLY A 283 MET A 284 SITE 5 AC1 26 GLY A 285 GLU A 318 GLY A 319 FWS A 402 SITE 6 AC1 26 HOH A 530 HOH A 578 HOH A 622 HOH A 628 SITE 7 AC1 26 HOH A 632 HOH A 647 SITE 1 AC2 14 VAL A 44 LEU A 45 ALA A 145 GLY A 194 SITE 2 AC2 14 VAL A 195 GLY A 196 THR A 203 MET A 284 SITE 3 AC2 14 GLY A 285 GLU A 318 GLY A 346 TYR A 347 SITE 4 AC2 14 IMP A 401 HOH A 529 CRYST1 88.710 88.710 84.480 90.00 90.00 90.00 I 4 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011273 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011273 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011837 0.00000