HEADER LIPID BINDING PROTEIN 24-APR-18 6D74 TITLE DIRECT ACTIVATION OF THE EXECUTIONER DOMAIN OF MLKL BY A SELECT TITLE 2 REPERTOIRE OF INOSITOL PHOSPHATES COMPND MOL_ID: 1; COMPND 2 MOLECULE: MIXED LINEAGE KINASE DOMAIN-LIKE PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 1-156; COMPND 5 SYNONYM: HMLKL; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MLKL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MEMBRANE, LIPID BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR G.C.ROYAPPA,D.E.MCNAMARA,T.MOLDOVEANU REVDAT 4 15-MAY-24 6D74 1 REMARK REVDAT 3 14-JUN-23 6D74 1 REMARK REVDAT 2 03-JUL-19 6D74 1 JRNL REVDAT 1 15-MAY-19 6D74 0 JRNL AUTH D.E.MCNAMARA,C.M.DOVEY,A.T.HALE,G.QUARATO,C.R.GRACE, JRNL AUTH 2 C.D.GUIBAO,J.DIEP,A.NOURSE,C.R.CAI,H.WU,R.C.KALATHUR, JRNL AUTH 3 D.R.GREEN,J.D.YORK,J.E.CARETTE,T.MOLDOVEANU JRNL TITL DIRECT ACTIVATION OF HUMAN MLKL BY A SELECT REPERTOIRE OF JRNL TITL 2 INOSITOL PHOSPHATE METABOLITES. JRNL REF CELL CHEM BIOL V. 26 863 2019 JRNL REFN ESSN 2451-9456 JRNL PMID 31031142 JRNL DOI 10.1016/J.CHEMBIOL.2019.03.010 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH C.M.DOVEY,J.DIEP,B.P.CLARKE,A.T.HALE,D.E.MCNAMARA,H.GUO, REMARK 1 AUTH 2 N.W.BROWN,J.Y.CAO,C.R.GRACE,P.J.GOUGH,J.BERTIN,S.J.DIXON, REMARK 1 AUTH 3 D.FIEDLER,E.S.MOCARSKI,W.J.KAISER,T.MOLDOVEANU,J.D.YORK, REMARK 1 AUTH 4 J.E.CARETTE REMARK 1 TITL MLKL REQUIRES THE INOSITOL PHOSPHATE CODE TO EXECUTE REMARK 1 TITL 2 NECROPTOSIS. REMARK 1 REF MOL. CELL V. 70 936 2018 REMARK 1 REFN ISSN 1097-4164 REMARK 1 PMID 29883610 REMARK 1 DOI 10.1016/J.MOLCEL.2018.05.010 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1, CNS 1.3 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6D74 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-APR-18. REMARK 100 THE DEPOSITION ID IS D_1000232910. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 500 UM [U-13C; U-15N] PROTEIN, REMARK 210 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D 1H-15N NOESY; REMARK 210 3D 1H-13C NOESY ALIPHATIC; 3D 1H- REMARK 210 13C NOESY AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE II; AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CARA 1.9, CYANA 2.1, TOPSPIN REMARK 210 3.5, CNS 1.3 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLY A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 53 75.98 -167.59 REMARK 500 1 PHE A 98 36.72 -94.44 REMARK 500 1 PRO A 123 43.85 -90.41 REMARK 500 1 SER A 125 79.45 -162.00 REMARK 500 1 ILE A 127 -58.59 -145.24 REMARK 500 1 SER A 128 -68.10 -175.82 REMARK 500 1 GLN A 129 -57.16 179.73 REMARK 500 2 ARG A 51 110.47 75.18 REMARK 500 2 VAL A 53 83.94 61.43 REMARK 500 2 PHE A 98 45.31 -105.58 REMARK 500 2 ILE A 127 -155.29 -129.85 REMARK 500 2 SER A 128 -155.82 -73.17 REMARK 500 2 MET A 150 79.33 -100.62 REMARK 500 2 ARG A 153 60.26 -159.74 REMARK 500 2 ASN A 155 -74.70 68.90 REMARK 500 3 MET A 21 89.42 -67.91 REMARK 500 3 LYS A 50 141.53 69.94 REMARK 500 3 PRO A 123 35.65 -81.00 REMARK 500 3 SER A 125 77.37 -158.65 REMARK 500 3 PRO A 126 38.42 -85.36 REMARK 500 3 ILE A 127 -50.90 -159.11 REMARK 500 3 SER A 128 -84.98 46.49 REMARK 500 3 ARG A 152 83.71 -158.43 REMARK 500 3 ARG A 153 -46.53 -170.64 REMARK 500 4 ASP A 94 11.19 -146.70 REMARK 500 4 LYS A 95 89.03 -67.16 REMARK 500 4 PRO A 123 22.78 -76.52 REMARK 500 4 SER A 125 76.07 -151.46 REMARK 500 4 GLN A 129 -12.26 -159.40 REMARK 500 4 LEU A 151 163.66 65.01 REMARK 500 4 ARG A 152 33.88 -160.64 REMARK 500 5 LYS A 50 -58.59 -177.99 REMARK 500 5 SER A 125 68.85 -156.00 REMARK 500 5 SER A 128 -77.68 60.04 REMARK 500 6 GLU A 2 -75.67 52.24 REMARK 500 6 MET A 21 90.38 -67.85 REMARK 500 6 ASP A 94 13.68 -149.46 REMARK 500 6 PRO A 123 41.22 -87.03 REMARK 500 6 SER A 125 69.44 -164.07 REMARK 500 6 SER A 128 -152.34 64.83 REMARK 500 6 ARG A 152 -56.83 -147.31 REMARK 500 6 ASP A 154 -65.72 170.99 REMARK 500 7 MET A 21 88.57 -67.78 REMARK 500 7 CYS A 24 73.91 58.95 REMARK 500 7 LYS A 50 -61.12 -165.72 REMARK 500 7 PRO A 54 -158.27 -85.01 REMARK 500 7 PRO A 123 30.87 -89.41 REMARK 500 7 SER A 125 70.41 -163.22 REMARK 500 7 SER A 128 -177.63 69.71 REMARK 500 7 MET A 150 51.74 -101.82 REMARK 500 REMARK 500 THIS ENTRY HAS 149 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30458 RELATED DB: BMRB DBREF 6D74 A 1 156 UNP Q8NB16 MLKL_HUMAN 1 156 SEQADV 6D74 GLY A 0 UNP Q8NB16 EXPRESSION TAG SEQRES 1 A 157 GLY MET GLU ASN LEU LYS HIS ILE ILE THR LEU GLY GLN SEQRES 2 A 157 VAL ILE HIS LYS ARG CYS GLU GLU MET LYS TYR CYS LYS SEQRES 3 A 157 LYS GLN CYS ARG ARG LEU GLY HIS ARG VAL LEU GLY LEU SEQRES 4 A 157 ILE LYS PRO LEU GLU MET LEU GLN ASP GLN GLY LYS ARG SEQRES 5 A 157 SER VAL PRO SER GLU LYS LEU THR THR ALA MET ASN ARG SEQRES 6 A 157 PHE LYS ALA ALA LEU GLU GLU ALA ASN GLY GLU ILE GLU SEQRES 7 A 157 LYS PHE SER ASN ARG SER ASN ILE CYS ARG PHE LEU THR SEQRES 8 A 157 ALA SER GLN ASP LYS ILE LEU PHE LYS ASP VAL ASN ARG SEQRES 9 A 157 LYS LEU SER ASP VAL TRP LYS GLU LEU SER LEU LEU LEU SEQRES 10 A 157 GLN VAL GLU GLN ARG MET PRO VAL SER PRO ILE SER GLN SEQRES 11 A 157 GLY ALA SER TRP ALA GLN GLU ASP GLN GLN ASP ALA ASP SEQRES 12 A 157 GLU ASP ARG ARG ALA PHE GLN MET LEU ARG ARG ASP ASN SEQRES 13 A 157 GLU HELIX 1 AA1 MET A 1 GLU A 19 1 19 HELIX 2 AA2 CYS A 24 GLY A 49 1 26 HELIX 3 AA3 SER A 55 PHE A 79 1 25 HELIX 4 AA4 ASN A 81 THR A 90 1 10 HELIX 5 AA5 PHE A 98 GLU A 119 1 22 HELIX 6 AA6 SER A 132 MET A 150 1 19 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1