HEADER IMMUNE SYSTEM 02-MAY-18 6DB7 TITLE CRYSTAL STRUCTURE OF ANTI-HIV-1 V3 FAB 1334 IN COMPLEX WITH A HIV-1 TITLE 2 GP120 V3 PEPTIDE FROM MN STRAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: HUMAN MONOCLONAL ANTI-HIV-1 GP120 V3 ANTIBODY 1334 FAB COMPND 3 HEAVY CHAIN; COMPND 4 CHAIN: H, I; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: HUMAN MONOCLONAL ANTI-HIV-1 GP120 V3 ANTIBODY 1334 FAB COMPND 8 LIGHT CHAIN; COMPND 9 CHAIN: L, M; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: HIV-1 GP120 V3 PEPTIDE FROM MN STRAIN; COMPND 13 CHAIN: P, Q; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 13 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 18 ORGANISM_TAXID: 11676 KEYWDS HIV-1, GP120, V3, MAB, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR K.-W.CHAN,X.-P.KONG REVDAT 4 18-DEC-19 6DB7 1 REMARK REVDAT 3 12-SEP-18 6DB7 1 JRNL REVDAT 2 25-JUL-18 6DB7 1 JRNL REVDAT 1 11-JUL-18 6DB7 0 JRNL AUTH K.W.CHAN,R.PAN,M.COSTA,M.K.GORNY,S.WANG,S.LU,X.P.KONG JRNL TITL STRUCTURAL COMPARISON OF HUMAN ANTI-HIV-1 GP120 V3 JRNL TITL 2 MONOCLONAL ANTIBODIES OF THE SAME GENE USAGE INDUCED BY JRNL TITL 3 VACCINATION AND CHRONIC INFECTION. JRNL REF J. VIROL. V. 92 2018 JRNL REFN ESSN 1098-5514 JRNL PMID 29997214 JRNL DOI 10.1128/JVI.00641-18 REMARK 2 REMARK 2 RESOLUTION. 2.21 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.21 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.17 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 46622 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.290 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.1702 - 5.3248 1.00 3300 149 0.1978 0.2224 REMARK 3 2 5.3248 - 4.2306 1.00 3226 143 0.1601 0.1940 REMARK 3 3 4.2306 - 3.6970 0.99 3197 144 0.1798 0.2344 REMARK 3 4 3.6970 - 3.3595 1.00 3200 142 0.1964 0.2401 REMARK 3 5 3.3595 - 3.1190 1.00 3226 144 0.2209 0.2551 REMARK 3 6 3.1190 - 2.9353 1.00 3178 143 0.2353 0.3409 REMARK 3 7 2.9353 - 2.7884 1.00 3181 143 0.2497 0.2910 REMARK 3 8 2.7884 - 2.6671 1.00 3192 143 0.2552 0.2812 REMARK 3 9 2.6671 - 2.5645 1.00 3188 143 0.2507 0.3153 REMARK 3 10 2.5645 - 2.4761 1.00 3191 143 0.2664 0.3225 REMARK 3 11 2.4761 - 2.3987 1.00 3174 142 0.2841 0.3613 REMARK 3 12 2.3987 - 2.3301 1.00 3193 142 0.2841 0.3430 REMARK 3 13 2.3301 - 2.2688 1.00 3175 143 0.3041 0.3851 REMARK 3 14 2.2688 - 2.2135 0.95 3003 134 0.3120 0.3701 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.730 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 7175 REMARK 3 ANGLE : 0.545 9770 REMARK 3 CHIRALITY : 0.043 1077 REMARK 3 PLANARITY : 0.005 1248 REMARK 3 DIHEDRAL : 14.930 4281 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6DB7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-MAY-18. REMARK 100 THE DEPOSITION ID IS D_1000234285. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-MAR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92009 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46644 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.213 REMARK 200 RESOLUTION RANGE LOW (A) : 29.170 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.21 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.29 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.84400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M NA CITRATE PH 4.5, 2.0 M REMARK 280 (NH4)2SO4, 5% PEG400, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 34.81500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: I, M, Q REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP H 217 REMARK 465 LYS H 218 REMARK 465 THR H 219 REMARK 465 HIS H 220 REMARK 465 GLU L 210 REMARK 465 CYS L 211 REMARK 465 SER L 212 REMARK 465 TYR P 301 REMARK 465 ASN P 302 REMARK 465 LYS P 303 REMARK 465 THR P 319 REMARK 465 THR P 320 REMARK 465 LYS P 321 REMARK 465 ASN P 322 REMARK 465 ILE P 323 REMARK 465 ILE P 324 REMARK 465 GLY P 325 REMARK 465 CYS I 216 REMARK 465 ASP I 217 REMARK 465 LYS I 218 REMARK 465 THR I 219 REMARK 465 HIS I 220 REMARK 465 SER M 1 REMARK 465 GLU M 210 REMARK 465 CYS M 211 REMARK 465 SER M 212 REMARK 465 TYR Q 301 REMARK 465 ASN Q 302 REMARK 465 LYS Q 303 REMARK 465 THR Q 319 REMARK 465 THR Q 320 REMARK 465 LYS Q 321 REMARK 465 ASN Q 322 REMARK 465 ILE Q 323 REMARK 465 ILE Q 324 REMARK 465 GLY Q 325 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER L 1 N REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA H 16 -164.92 -76.48 REMARK 500 ASP H 53 -70.97 -87.75 REMARK 500 ASN H 100D 98.41 -69.31 REMARK 500 PRO H 100G 131.34 -38.75 REMARK 500 SER H 132 68.89 -115.90 REMARK 500 ASP H 144 75.71 56.33 REMARK 500 ASP L 51 -39.73 66.87 REMARK 500 ASP L 151 -107.53 55.06 REMARK 500 GLU L 198 75.22 47.34 REMARK 500 ASP I 53 -70.46 -81.91 REMARK 500 THR I 87 107.59 -57.67 REMARK 500 VAL I 100A 68.34 -108.07 REMARK 500 ASN I 100F 168.65 64.69 REMARK 500 PRO I 100G -83.11 -58.89 REMARK 500 ALA I 100H 88.72 59.26 REMARK 500 ASP I 144 76.13 55.37 REMARK 500 ASP M 51 -56.96 65.17 REMARK 500 ASP M 151 -101.19 57.35 REMARK 500 PRO Q 313 105.74 -56.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL H 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL H 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL H 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL L 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL L 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL L 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL I 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL M 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL M 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL M 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL M 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL M 305 DBREF 6DB7 H 1 220 PDB 6DB7 6DB7 1 220 DBREF 6DB7 L 1 212 PDB 6DB7 6DB7 1 212 DBREF 6DB7 P 301 325 UNP A9Q0A0 A9Q0A0_9HIV1 94 116 DBREF 6DB7 I 1 220 PDB 6DB7 6DB7 1 220 DBREF 6DB7 M 1 212 PDB 6DB7 6DB7 1 212 DBREF 6DB7 Q 301 325 UNP A9Q0A0 A9Q0A0_9HIV1 94 116 SEQRES 1 H 238 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 H 238 PRO GLY ALA SER VAL LYS VAL SER CYS GLU ALA SER GLY SEQRES 3 H 238 TYR THR PHE ALA LYS PHE ALA ILE HIS TRP VAL ARG GLN SEQRES 4 H 238 ALA PRO ARG GLN GLY LEU GLU TRP MET GLY TRP ILE ASN SEQRES 5 H 238 GLY ASP ASP GLY LYS THR GLU TYR SER GLN LYS PHE GLN SEQRES 6 H 238 ASP ARG VAL THR MET THR ARG ASP THR SER ALA SER THR SEQRES 7 H 238 VAL TYR MET GLU LEU SER SER LEU ARG SER GLU ASP THR SEQRES 8 H 238 ALA LEU TYR TYR CYS ALA ARG ALA MET TYR PRO ASP THR SEQRES 9 H 238 VAL THR GLY ASN ASP ASN PRO ALA PRO PRO PRO PHE GLU SEQRES 10 H 238 GLY ASP TYR TRP GLY GLN GLY THR LEU VAL THR VAL SER SEQRES 11 H 238 SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA SEQRES 12 H 238 PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU SEQRES 13 H 238 GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR SEQRES 14 H 238 VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS SEQRES 15 H 238 THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER SEQRES 16 H 238 LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY SEQRES 17 H 238 THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER SEQRES 18 H 238 ASN THR LYS VAL ASP LYS ARG VAL GLU PRO LYS SER CYS SEQRES 19 H 238 ASP LYS THR HIS SEQRES 1 L 214 SER TYR GLU LEU THR GLN PRO PRO SER VAL SER VAL SER SEQRES 2 L 214 PRO GLY GLN THR ALA ARG ILE THR CYS SER GLY ASP ALA SEQRES 3 L 214 LEU PRO LYS GLU TYR ALA TYR TRP TYR GLN GLN LYS SER SEQRES 4 L 214 GLY GLN ALA PRO VAL LEU VAL ILE TYR GLU ASP THR ARG SEQRES 5 L 214 ARG PRO SER GLY ILE PRO GLU ARG PHE SER GLY SER SER SEQRES 6 L 214 SER GLY THR MET ALA THR LEU THR VAL SER GLY ALA HIS SEQRES 7 L 214 VAL ASP ASP GLU ALA ASP TYR TYR CYS TYR SER ARG ASP SEQRES 8 L 214 THR SER ALA ASN GLN TRP VAL PHE GLY GLY GLY THR LYS SEQRES 9 L 214 LEU THR VAL LEU GLY GLN PRO LYS ALA ALA PRO SER VAL SEQRES 10 L 214 THR LEU PHE PRO PRO SER SER GLU GLU LEU GLN ALA ASN SEQRES 11 L 214 LYS ALA THR LEU VAL CYS LEU ILE SER ASP PHE TYR PRO SEQRES 12 L 214 GLY ALA VAL THR VAL ALA TRP LYS ALA ASP SER SER PRO SEQRES 13 L 214 VAL LYS ALA GLY VAL GLU THR THR THR PRO SER LYS GLN SEQRES 14 L 214 SER ASN ASN LYS TYR ALA ALA SER SER TYR LEU SER LEU SEQRES 15 L 214 THR PRO GLU GLN TRP LYS SER HIS ARG SER TYR SER CYS SEQRES 16 L 214 GLN VAL THR HIS GLU GLY SER THR VAL GLU LYS THR VAL SEQRES 17 L 214 ALA PRO THR GLU CYS SER SEQRES 1 P 23 TYR ASN LYS ARG LYS ARG ILE HIS ILE GLY PRO GLY ARG SEQRES 2 P 23 ALA PHE TYR THR THR LYS ASN ILE ILE GLY SEQRES 1 I 238 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 I 238 PRO GLY ALA SER VAL LYS VAL SER CYS GLU ALA SER GLY SEQRES 3 I 238 TYR THR PHE ALA LYS PHE ALA ILE HIS TRP VAL ARG GLN SEQRES 4 I 238 ALA PRO ARG GLN GLY LEU GLU TRP MET GLY TRP ILE ASN SEQRES 5 I 238 GLY ASP ASP GLY LYS THR GLU TYR SER GLN LYS PHE GLN SEQRES 6 I 238 ASP ARG VAL THR MET THR ARG ASP THR SER ALA SER THR SEQRES 7 I 238 VAL TYR MET GLU LEU SER SER LEU ARG SER GLU ASP THR SEQRES 8 I 238 ALA LEU TYR TYR CYS ALA ARG ALA MET TYR PRO ASP THR SEQRES 9 I 238 VAL THR GLY ASN ASP ASN PRO ALA PRO PRO PRO PHE GLU SEQRES 10 I 238 GLY ASP TYR TRP GLY GLN GLY THR LEU VAL THR VAL SER SEQRES 11 I 238 SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA SEQRES 12 I 238 PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU SEQRES 13 I 238 GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR SEQRES 14 I 238 VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS SEQRES 15 I 238 THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER SEQRES 16 I 238 LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY SEQRES 17 I 238 THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER SEQRES 18 I 238 ASN THR LYS VAL ASP LYS ARG VAL GLU PRO LYS SER CYS SEQRES 19 I 238 ASP LYS THR HIS SEQRES 1 M 214 SER TYR GLU LEU THR GLN PRO PRO SER VAL SER VAL SER SEQRES 2 M 214 PRO GLY GLN THR ALA ARG ILE THR CYS SER GLY ASP ALA SEQRES 3 M 214 LEU PRO LYS GLU TYR ALA TYR TRP TYR GLN GLN LYS SER SEQRES 4 M 214 GLY GLN ALA PRO VAL LEU VAL ILE TYR GLU ASP THR ARG SEQRES 5 M 214 ARG PRO SER GLY ILE PRO GLU ARG PHE SER GLY SER SER SEQRES 6 M 214 SER GLY THR MET ALA THR LEU THR VAL SER GLY ALA HIS SEQRES 7 M 214 VAL ASP ASP GLU ALA ASP TYR TYR CYS TYR SER ARG ASP SEQRES 8 M 214 THR SER ALA ASN GLN TRP VAL PHE GLY GLY GLY THR LYS SEQRES 9 M 214 LEU THR VAL LEU GLY GLN PRO LYS ALA ALA PRO SER VAL SEQRES 10 M 214 THR LEU PHE PRO PRO SER SER GLU GLU LEU GLN ALA ASN SEQRES 11 M 214 LYS ALA THR LEU VAL CYS LEU ILE SER ASP PHE TYR PRO SEQRES 12 M 214 GLY ALA VAL THR VAL ALA TRP LYS ALA ASP SER SER PRO SEQRES 13 M 214 VAL LYS ALA GLY VAL GLU THR THR THR PRO SER LYS GLN SEQRES 14 M 214 SER ASN ASN LYS TYR ALA ALA SER SER TYR LEU SER LEU SEQRES 15 M 214 THR PRO GLU GLN TRP LYS SER HIS ARG SER TYR SER CYS SEQRES 16 M 214 GLN VAL THR HIS GLU GLY SER THR VAL GLU LYS THR VAL SEQRES 17 M 214 ALA PRO THR GLU CYS SER SEQRES 1 Q 23 TYR ASN LYS ARG LYS ARG ILE HIS ILE GLY PRO GLY ARG SEQRES 2 Q 23 ALA PHE TYR THR THR LYS ASN ILE ILE GLY HET GOL H 301 6 HET GOL H 302 6 HET GOL H 303 6 HET GOL L 301 6 HET GOL L 302 6 HET GOL L 303 6 HET GOL I 301 6 HET GOL M 301 6 HET GOL M 302 6 HET GOL M 303 6 HET GOL M 304 6 HET GOL M 305 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 7 GOL 12(C3 H8 O3) FORMUL 19 HOH *375(H2 O) HELIX 1 AA1 THR H 28 LYS H 31 5 4 HELIX 2 AA2 ARG H 83 THR H 87 5 5 HELIX 3 AA3 SER H 127 LYS H 129 5 3 HELIX 4 AA4 SER H 156 ALA H 158 5 3 HELIX 5 AA5 SER H 187 THR H 191 5 5 HELIX 6 AA6 LYS H 201 ASN H 204 5 4 HELIX 7 AA7 HIS L 79 GLU L 83 5 5 HELIX 8 AA8 SER L 121 ALA L 127 1 7 HELIX 9 AA9 THR L 181 HIS L 188 1 8 HELIX 10 AB1 THR I 28 LYS I 31 5 4 HELIX 11 AB2 ARG I 83 THR I 87 5 5 HELIX 12 AB3 SER I 156 ALA I 158 5 3 HELIX 13 AB4 LYS I 201 ASN I 204 5 4 HELIX 14 AB5 HIS M 79 GLU M 83 5 5 HELIX 15 AB6 SER M 121 ALA M 127 1 7 HELIX 16 AB7 THR M 181 SER M 187 1 7 SHEET 1 AA1 4 GLN H 3 GLN H 6 0 SHEET 2 AA1 4 VAL H 18 SER H 25 -1 O GLU H 23 N VAL H 5 SHEET 3 AA1 4 THR H 77 LEU H 82 -1 O VAL H 78 N CYS H 22 SHEET 4 AA1 4 VAL H 67 ASP H 72 -1 N THR H 70 O TYR H 79 SHEET 1 AA2 6 GLU H 10 LYS H 12 0 SHEET 2 AA2 6 THR H 107 VAL H 111 1 O THR H 110 N LYS H 12 SHEET 3 AA2 6 ALA H 88 ARG H 94 -1 N TYR H 90 O THR H 107 SHEET 4 AA2 6 ALA H 33 GLN H 39 -1 N HIS H 35 O ALA H 93 SHEET 5 AA2 6 GLU H 46 ASN H 52 -1 O MET H 48 N TRP H 36 SHEET 6 AA2 6 THR H 57 TYR H 59 -1 O GLU H 58 N TRP H 50 SHEET 1 AA3 4 SER H 120 LEU H 124 0 SHEET 2 AA3 4 THR H 135 TYR H 145 -1 O GLY H 139 N LEU H 124 SHEET 3 AA3 4 TYR H 176 PRO H 185 -1 O VAL H 184 N ALA H 136 SHEET 4 AA3 4 VAL H 163 THR H 165 -1 N HIS H 164 O VAL H 181 SHEET 1 AA4 4 THR H 131 SER H 132 0 SHEET 2 AA4 4 THR H 135 TYR H 145 -1 O THR H 135 N SER H 132 SHEET 3 AA4 4 TYR H 176 PRO H 185 -1 O VAL H 184 N ALA H 136 SHEET 4 AA4 4 VAL H 169 LEU H 170 -1 N VAL H 169 O SER H 177 SHEET 1 AA5 3 THR H 151 TRP H 154 0 SHEET 2 AA5 3 TYR H 194 HIS H 200 -1 O ASN H 197 N SER H 153 SHEET 3 AA5 3 THR H 205 VAL H 211 -1 O VAL H 207 N VAL H 198 SHEET 1 AA6 5 SER L 9 VAL L 13 0 SHEET 2 AA6 5 THR L 102 VAL L 106 1 O THR L 105 N VAL L 11 SHEET 3 AA6 5 ASP L 85 ASP L 92 -1 N TYR L 86 O THR L 102 SHEET 4 AA6 5 TYR L 34 GLN L 38 -1 N TYR L 36 O TYR L 87 SHEET 5 AA6 5 VAL L 45 ILE L 48 -1 O VAL L 45 N GLN L 37 SHEET 1 AA7 4 SER L 9 VAL L 13 0 SHEET 2 AA7 4 THR L 102 VAL L 106 1 O THR L 105 N VAL L 11 SHEET 3 AA7 4 ASP L 85 ASP L 92 -1 N TYR L 86 O THR L 102 SHEET 4 AA7 4 GLN L 95B PHE L 98 -1 O GLN L 95B N ASP L 92 SHEET 1 AA8 3 ALA L 19 SER L 24 0 SHEET 2 AA8 3 MET L 70 VAL L 75 -1 O ALA L 71 N CYS L 23 SHEET 3 AA8 3 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AA9 4 SER L 114 PHE L 118 0 SHEET 2 AA9 4 ALA L 130 PHE L 139 -1 O LEU L 135 N THR L 116 SHEET 3 AA9 4 TYR L 172 LEU L 180 -1 O ALA L 174 N ILE L 136 SHEET 4 AA9 4 VAL L 159 THR L 161 -1 N GLU L 160 O TYR L 177 SHEET 1 AB1 4 SER L 114 PHE L 118 0 SHEET 2 AB1 4 ALA L 130 PHE L 139 -1 O LEU L 135 N THR L 116 SHEET 3 AB1 4 TYR L 172 LEU L 180 -1 O ALA L 174 N ILE L 136 SHEET 4 AB1 4 SER L 165 LYS L 166 -1 N SER L 165 O ALA L 173 SHEET 1 AB2 4 SER L 153 PRO L 154 0 SHEET 2 AB2 4 THR L 145 ALA L 150 -1 N ALA L 150 O SER L 153 SHEET 3 AB2 4 TYR L 191 THR L 196 -1 O GLN L 194 N ALA L 147 SHEET 4 AB2 4 THR L 201 VAL L 206 -1 O VAL L 206 N TYR L 191 SHEET 1 AB3 2 ILE P 307 GLY P 312 0 SHEET 2 AB3 2 ARG P 315 PHE P 317 -1 O ARG P 315 N ILE P 309 SHEET 1 AB4 4 GLN I 3 GLN I 6 0 SHEET 2 AB4 4 VAL I 18 SER I 25 -1 O GLU I 23 N VAL I 5 SHEET 3 AB4 4 THR I 77 LEU I 82 -1 O MET I 80 N VAL I 20 SHEET 4 AB4 4 VAL I 67 ASP I 72 -1 N THR I 70 O TYR I 79 SHEET 1 AB5 6 GLU I 10 LYS I 12 0 SHEET 2 AB5 6 THR I 107 VAL I 111 1 O THR I 110 N LYS I 12 SHEET 3 AB5 6 ALA I 88 ARG I 94 -1 N TYR I 90 O THR I 107 SHEET 4 AB5 6 ALA I 33 GLN I 39 -1 N HIS I 35 O ALA I 93 SHEET 5 AB5 6 GLU I 46 ASN I 52 -1 O MET I 48 N TRP I 36 SHEET 6 AB5 6 THR I 57 TYR I 59 -1 O GLU I 58 N TRP I 50 SHEET 1 AB6 4 SER I 120 SER I 127 0 SHEET 2 AB6 4 ALA I 136 TYR I 145 -1 O GLY I 139 N LEU I 124 SHEET 3 AB6 4 TYR I 176 VAL I 184 -1 O LEU I 178 N VAL I 142 SHEET 4 AB6 4 VAL I 163 THR I 165 -1 N HIS I 164 O VAL I 181 SHEET 1 AB7 4 SER I 120 SER I 127 0 SHEET 2 AB7 4 ALA I 136 TYR I 145 -1 O GLY I 139 N LEU I 124 SHEET 3 AB7 4 TYR I 176 VAL I 184 -1 O LEU I 178 N VAL I 142 SHEET 4 AB7 4 VAL I 169 LEU I 170 -1 N VAL I 169 O SER I 177 SHEET 1 AB8 3 THR I 151 TRP I 154 0 SHEET 2 AB8 3 ILE I 195 HIS I 200 -1 O ASN I 197 N SER I 153 SHEET 3 AB8 3 THR I 205 ARG I 210 -1 O VAL I 207 N VAL I 198 SHEET 1 AB9 5 SER M 9 VAL M 13 0 SHEET 2 AB9 5 THR M 102 VAL M 106 1 O THR M 105 N VAL M 11 SHEET 3 AB9 5 ASP M 85 ASP M 92 -1 N TYR M 86 O THR M 102 SHEET 4 AB9 5 TYR M 34 GLN M 38 -1 N GLN M 38 O ASP M 85 SHEET 5 AB9 5 VAL M 45 ILE M 48 -1 O VAL M 45 N GLN M 37 SHEET 1 AC1 4 SER M 9 VAL M 13 0 SHEET 2 AC1 4 THR M 102 VAL M 106 1 O THR M 105 N VAL M 11 SHEET 3 AC1 4 ASP M 85 ASP M 92 -1 N TYR M 86 O THR M 102 SHEET 4 AC1 4 GLN M 95B PHE M 98 -1 O GLN M 95B N ASP M 92 SHEET 1 AC2 3 ALA M 19 SER M 24 0 SHEET 2 AC2 3 MET M 70 VAL M 75 -1 O ALA M 71 N CYS M 23 SHEET 3 AC2 3 PHE M 62 SER M 67 -1 N SER M 63 O THR M 74 SHEET 1 AC3 4 SER M 114 PHE M 118 0 SHEET 2 AC3 4 ALA M 130 PHE M 139 -1 O LEU M 135 N THR M 116 SHEET 3 AC3 4 TYR M 172 LEU M 180 -1 O LEU M 180 N ALA M 130 SHEET 4 AC3 4 VAL M 159 THR M 161 -1 N GLU M 160 O TYR M 177 SHEET 1 AC4 4 SER M 114 PHE M 118 0 SHEET 2 AC4 4 ALA M 130 PHE M 139 -1 O LEU M 135 N THR M 116 SHEET 3 AC4 4 TYR M 172 LEU M 180 -1 O LEU M 180 N ALA M 130 SHEET 4 AC4 4 SER M 165 LYS M 166 -1 N SER M 165 O ALA M 173 SHEET 1 AC5 4 SER M 153 VAL M 155 0 SHEET 2 AC5 4 THR M 145 ALA M 150 -1 N ALA M 150 O SER M 153 SHEET 3 AC5 4 TYR M 191 HIS M 197 -1 O GLN M 194 N ALA M 147 SHEET 4 AC5 4 SER M 200 VAL M 206 -1 O SER M 200 N HIS M 197 SHEET 1 AC6 2 ILE Q 307 GLY Q 312 0 SHEET 2 AC6 2 ARG Q 315 PHE Q 317 -1 O ARG Q 315 N ILE Q 309 SSBOND 1 CYS H 22 CYS H 92 1555 1555 2.03 SSBOND 2 CYS H 140 CYS H 196 1555 1555 2.04 SSBOND 3 CYS L 23 CYS L 88 1555 1555 2.03 SSBOND 4 CYS L 134 CYS L 193 1555 1555 2.03 SSBOND 5 CYS I 22 CYS I 92 1555 1555 2.04 SSBOND 6 CYS I 140 CYS I 196 1555 1555 2.03 SSBOND 7 CYS M 23 CYS M 88 1555 1555 2.03 SSBOND 8 CYS M 134 CYS M 193 1555 1555 2.03 CISPEP 1 PHE H 146 PRO H 147 0 -3.26 CISPEP 2 GLU H 148 PRO H 149 0 -1.08 CISPEP 3 TYR L 140 PRO L 141 0 0.72 CISPEP 4 PHE I 146 PRO I 147 0 -4.77 CISPEP 5 GLU I 148 PRO I 149 0 2.02 CISPEP 6 TYR M 140 PRO M 141 0 1.78 SITE 1 AC1 3 SER H 188 THR H 191 GLN H 192 SITE 1 AC2 2 ASP H 208 GLN I 192 SITE 1 AC3 3 GLY H 133 GLY H 134 SER H 186 SITE 1 AC4 3 GLN L 184 HIS L 188 HOH L 466 SITE 1 AC5 4 LYS L 149 ASP L 151 SER L 152 GLU L 203 SITE 1 AC6 5 ASP L 151 SER L 152 SER L 153 ARG L 189 SITE 2 AC6 5 HOH L 452 SITE 1 AC7 5 SER I 127 SER I 128 LYS I 129 SER I 187 SITE 2 AC7 5 HOH I 451 SITE 1 AC8 6 VAL I 181 HOH I 412 SER M 114 THR M 116 SITE 2 AC8 6 LEU M 135 SER M 137 SITE 1 AC9 2 SER M 40 LYS M 166 SITE 1 AD1 3 THR I 165 SER M 168 HOH M 437 SITE 1 AD2 4 ARG I 42 TYR M 87 GLY M 100 GLY M 101 SITE 1 AD3 3 GLN M 184 HIS M 188 TYR M 191 CRYST1 70.802 69.630 97.191 90.00 97.47 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014124 0.000000 0.001853 0.00000 SCALE2 0.000000 0.014362 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010377 0.00000