HEADER LYASE 09-MAY-18 6DD6 TITLE CRYSTAL STRUCTURE OF BACTERIAL (6-4) PHOTOLYASE PHRB FROM IN SITU TITLE 2 SERIAL LAUE DIFFRACTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOTOLYASE PHRB; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHIZOBIUM RADIOBACTER; SOURCE 3 ORGANISM_COMMON: AGROBACTERIUM TUMEFACIENS; SOURCE 4 ORGANISM_TAXID: 358; SOURCE 5 GENE: SY94_4724; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DNA REPAIR, LAUE DIFFRACTION, SERIAL CRYSTALLOGRAPHY, IN SITU KEYWDS 2 DIFFRACTION, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR Z.REN REVDAT 4 11-OCT-23 6DD6 1 REMARK REVDAT 3 11-DEC-19 6DD6 1 REMARK REVDAT 2 08-AUG-18 6DD6 1 JRNL REVDAT 1 18-JUL-18 6DD6 0 JRNL AUTH Z.REN,M.AYHAN,S.BANDARA,K.BOWATTE,I.KUMARAPPERUMA, JRNL AUTH 2 S.GUNAWARDANA,H.SHIN,C.WANG,X.ZENG,X.YANG JRNL TITL CRYSTAL-ON-CRYSTAL CHIPS FOR IN SITU SERIAL DIFFRACTION AT JRNL TITL 2 ROOM TEMPERATURE. JRNL REF LAB CHIP V. 18 2246 2018 JRNL REFN ISSN 1473-0189 JRNL PMID 29952383 JRNL DOI 10.1039/C8LC00489G REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.68 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.160 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 27623 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1388 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.6912 - 4.9539 0.99 2779 163 0.1199 0.1690 REMARK 3 2 4.9539 - 3.9326 1.00 2693 131 0.1021 0.1631 REMARK 3 3 3.9326 - 3.4356 1.00 2642 145 0.1238 0.1992 REMARK 3 4 3.4356 - 3.1215 1.00 2651 127 0.1568 0.2586 REMARK 3 5 3.1215 - 2.8978 1.00 2639 123 0.1904 0.2724 REMARK 3 6 2.8978 - 2.7270 1.00 2600 133 0.2173 0.3131 REMARK 3 7 2.7270 - 2.5904 1.00 2602 160 0.2484 0.3495 REMARK 3 8 2.5904 - 2.4777 0.99 2559 141 0.2613 0.3099 REMARK 3 9 2.4777 - 2.3823 0.98 2547 131 0.2882 0.3263 REMARK 3 10 2.3823 - 2.3001 0.97 2523 134 0.3100 0.3572 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.110 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 4318 REMARK 3 ANGLE : 1.127 5858 REMARK 3 CHIRALITY : 0.054 604 REMARK 3 PLANARITY : 0.006 757 REMARK 3 DIHEDRAL : 14.382 2535 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 18.5419 9.9091 52.2304 REMARK 3 T TENSOR REMARK 3 T11: 0.1860 T22: 0.2144 REMARK 3 T33: 0.2146 T12: -0.0507 REMARK 3 T13: -0.0008 T23: 0.0290 REMARK 3 L TENSOR REMARK 3 L11: 1.5418 L22: 2.3422 REMARK 3 L33: 1.3465 L12: -0.3545 REMARK 3 L13: -0.2877 L23: 0.7331 REMARK 3 S TENSOR REMARK 3 S11: 0.0343 S12: -0.0032 S13: 0.0227 REMARK 3 S21: -0.0336 S22: 0.0266 S23: -0.2518 REMARK 3 S31: -0.0106 S32: 0.0896 S33: -0.0406 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6DD6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-MAY-18. REMARK 100 THE DEPOSITION ID IS D_1000234402. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 294 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : L REMARK 200 WAVELENGTH OR RANGE (A) : 1-1.25 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : KB MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX340-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : PRECOGNITION 5.2, EPINORM 5.2 REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27730 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 15.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.40 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: LAUE REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 4DJA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.7 MG/ML PROTEIN, 9-13% PEG 4000, 6% REMARK 280 ISOPROPANOL, AND 50 MM SODIUM CITRATE BUFFER AT PH 5.6, REMARK 280 MICROBATCH, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 49.85000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 53.40000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 49.85000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 53.40000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 514 REMARK 465 HIS A 515 REMARK 465 HIS A 516 REMARK 465 HIS A 517 REMARK 465 HIS A 518 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 181 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O MET A 35 OG SER A 39 2.13 REMARK 500 OE2 GLU A 312 O HOH A 701 2.13 REMARK 500 O HOH A 822 O HOH A 851 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 454 CA - CB - SG ANGL. DEV. = -14.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 95 70.11 31.72 REMARK 500 ARG A 98 136.67 -174.93 REMARK 500 ARG A 130 3.28 -69.16 REMARK 500 ARG A 146 91.05 -178.10 REMARK 500 LYS A 147 6.82 -67.35 REMARK 500 ASN A 182 -79.35 -141.15 REMARK 500 ARG A 183 -117.45 -111.87 REMARK 500 GLN A 184 151.82 89.99 REMARK 500 PRO A 185 173.13 -55.88 REMARK 500 ASP A 189 100.78 -45.04 REMARK 500 LEU A 263 -115.96 36.84 REMARK 500 ASN A 329 62.85 -153.45 REMARK 500 ILE A 372 -81.65 -103.73 REMARK 500 TYR A 424 51.08 -96.87 REMARK 500 HIS A 475 9.66 -67.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 984 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH A 985 DISTANCE = 6.11 ANGSTROMS REMARK 525 HOH A 986 DISTANCE = 6.12 ANGSTROMS REMARK 525 HOH A 987 DISTANCE = 7.51 ANGSTROMS REMARK 525 HOH A 988 DISTANCE = 8.01 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 603 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 350 SG REMARK 620 2 SF4 A 603 S1 140.6 REMARK 620 3 SF4 A 603 S2 119.7 92.4 REMARK 620 4 SF4 A 603 S4 113.7 87.6 88.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 603 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 438 SG REMARK 620 2 SF4 A 603 S2 131.6 REMARK 620 3 SF4 A 603 S3 114.5 94.7 REMARK 620 4 SF4 A 603 S4 124.8 88.5 93.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 603 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 441 SG REMARK 620 2 SF4 A 603 S1 130.6 REMARK 620 3 SF4 A 603 S2 109.4 91.3 REMARK 620 4 SF4 A 603 S3 135.5 84.5 93.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 603 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 454 SG REMARK 620 2 SF4 A 603 S1 50.9 REMARK 620 3 SF4 A 603 S3 92.5 84.1 REMARK 620 4 SF4 A 603 S4 136.2 86.5 92.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DLZ A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SF4 A 603 DBREF1 6DD6 A 1 507 UNP A0A083ZLV8_RHIRD DBREF2 6DD6 A A0A083ZLV8 1 507 SEQADV 6DD6 ALA A 508 UNP A0A083ZLV EXPRESSION TAG SEQADV 6DD6 ALA A 509 UNP A0A083ZLV EXPRESSION TAG SEQADV 6DD6 ALA A 510 UNP A0A083ZLV EXPRESSION TAG SEQADV 6DD6 LEU A 511 UNP A0A083ZLV EXPRESSION TAG SEQADV 6DD6 GLU A 512 UNP A0A083ZLV EXPRESSION TAG SEQADV 6DD6 HIS A 513 UNP A0A083ZLV EXPRESSION TAG SEQADV 6DD6 HIS A 514 UNP A0A083ZLV EXPRESSION TAG SEQADV 6DD6 HIS A 515 UNP A0A083ZLV EXPRESSION TAG SEQADV 6DD6 HIS A 516 UNP A0A083ZLV EXPRESSION TAG SEQADV 6DD6 HIS A 517 UNP A0A083ZLV EXPRESSION TAG SEQADV 6DD6 HIS A 518 UNP A0A083ZLV EXPRESSION TAG SEQRES 1 A 518 MET SER GLN LEU VAL LEU ILE LEU GLY ASP GLN LEU SER SEQRES 2 A 518 PRO SER ILE ALA ALA LEU ASP GLY VAL ASP LYS LYS GLN SEQRES 3 A 518 ASP THR ILE VAL LEU CYS GLU VAL MET ALA GLU ALA SER SEQRES 4 A 518 TYR VAL GLY HIS HIS LYS LYS LYS ILE ALA PHE ILE PHE SEQRES 5 A 518 SER ALA MET ARG HIS PHE ALA GLU GLU LEU ARG GLY GLU SEQRES 6 A 518 GLY TYR ARG VAL ARG TYR THR ARG ILE ASP ASP ALA ASP SEQRES 7 A 518 ASN ALA GLY SER PHE THR GLY GLU VAL LYS ARG ALA ILE SEQRES 8 A 518 ASP ASP LEU THR PRO SER ARG ILE CYS VAL THR GLU PRO SEQRES 9 A 518 GLY GLU TRP ARG VAL ARG SER GLU MET ASP GLY PHE ALA SEQRES 10 A 518 GLY ALA PHE GLY ILE GLN VAL ASP ILE ARG SER ASP ARG SEQRES 11 A 518 ARG PHE LEU SER SER HIS GLY GLU PHE ARG ASN TRP ALA SEQRES 12 A 518 ALA GLY ARG LYS SER LEU THR MET GLU TYR PHE TYR ARG SEQRES 13 A 518 GLU MET ARG ARG LYS THR GLY LEU LEU MET ASN GLY GLU SEQRES 14 A 518 GLN PRO VAL GLY GLY ARG TRP ASN PHE ASP ALA GLU ASN SEQRES 15 A 518 ARG GLN PRO ALA ARG PRO ASP LEU LEU ARG PRO LYS HIS SEQRES 16 A 518 PRO VAL PHE ALA PRO ASP LYS ILE THR LYS GLU VAL ILE SEQRES 17 A 518 ASP THR VAL GLU ARG LEU PHE PRO ASP ASN PHE GLY LYS SEQRES 18 A 518 LEU GLU ASN PHE GLY PHE ALA VAL THR ARG THR ASP ALA SEQRES 19 A 518 GLU ARG ALA LEU SER ALA PHE ILE ASP ASP PHE LEU CYS SEQRES 20 A 518 ASN PHE GLY ALA THR GLN ASP ALA MET LEU GLN ASP ASP SEQRES 21 A 518 PRO ASN LEU ASN HIS SER LEU LEU SER PHE TYR ILE ASN SEQRES 22 A 518 CYS GLY LEU LEU ASP ALA LEU ASP VAL CYS LYS ALA ALA SEQRES 23 A 518 GLU ARG ALA TYR HIS GLU GLY GLY ALA PRO LEU ASN ALA SEQRES 24 A 518 VAL GLU GLY PHE ILE ARG GLN ILE ILE GLY TRP ARG GLU SEQRES 25 A 518 TYR MET ARG GLY ILE TYR TRP LEU ALA GLY PRO ASP TYR SEQRES 26 A 518 VAL ASP SER ASN PHE PHE GLU ASN ASP ARG SER LEU PRO SEQRES 27 A 518 VAL PHE TYR TRP THR GLY LYS THR HIS MET ASN CYS MET SEQRES 28 A 518 ALA LYS VAL ILE THR GLU THR ILE GLU ASN ALA TYR ALA SEQRES 29 A 518 HIS HIS ILE GLN ARG LEU MET ILE THR GLY ASN PHE ALA SEQRES 30 A 518 LEU LEU ALA GLY ILE ASP PRO LYS ALA VAL HIS ARG TRP SEQRES 31 A 518 TYR LEU GLU VAL TYR ALA ASP ALA TYR GLU TRP VAL GLU SEQRES 32 A 518 LEU PRO ASN VAL ILE GLY MET SER GLN PHE ALA ASP GLY SEQRES 33 A 518 GLY PHE LEU GLY THR LYS PRO TYR ALA ALA SER GLY ASN SEQRES 34 A 518 TYR ILE ASN ARG MET SER ASP TYR CYS ASP THR CYS ARG SEQRES 35 A 518 TYR ASP PRO LYS GLU ARG LEU GLY ASP ASN ALA CYS PRO SEQRES 36 A 518 PHE ASN ALA LEU TYR TRP ASP PHE LEU ALA ARG ASN ARG SEQRES 37 A 518 GLU LYS LEU LYS SER ASN HIS ARG LEU ALA GLN PRO TYR SEQRES 38 A 518 ALA THR TRP ALA ARG MET SER GLU ASP VAL ARG HIS ASP SEQRES 39 A 518 LEU ARG ALA LYS ALA ALA ALA PHE LEU ARG LYS LEU ASP SEQRES 40 A 518 ALA ALA ALA LEU GLU HIS HIS HIS HIS HIS HIS HET FAD A 601 53 HET DLZ A 602 23 HET SF4 A 603 8 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM DLZ 1-DEOXY-1-(6,7-DIMETHYL-2,4-DIOXO-3,4-DIHYDROPTERIDIN- HETNAM 2 DLZ 8(2H)-YL)-D-RIBITOL HETNAM SF4 IRON/SULFUR CLUSTER HETSYN DLZ 6,7-DIMETHYL-8-(1'-D-RIBITYL) LUMAZINE FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 DLZ C13 H18 N4 O6 FORMUL 4 SF4 FE4 S4 FORMUL 5 HOH *288(H2 O) HELIX 1 AA1 ILE A 16 ASP A 20 5 5 HELIX 2 AA2 VAL A 34 TYR A 40 1 7 HELIX 3 AA3 HIS A 44 GLU A 65 1 22 HELIX 4 AA4 SER A 82 THR A 95 1 14 HELIX 5 AA5 GLU A 106 GLY A 115 1 10 HELIX 6 AA6 GLY A 115 GLY A 121 1 7 HELIX 7 AA7 SER A 135 ALA A 144 1 10 HELIX 8 AA8 THR A 150 GLY A 163 1 14 HELIX 9 AA9 GLY A 173 ARG A 175 5 3 HELIX 10 AB1 ASP A 201 PHE A 215 1 15 HELIX 11 AB2 THR A 230 PHE A 245 1 16 HELIX 12 AB3 LEU A 246 PHE A 249 5 4 HELIX 13 AB4 LEU A 268 ASN A 273 1 6 HELIX 14 AB5 ASP A 278 GLU A 292 1 15 HELIX 15 AB6 PRO A 296 GLY A 309 1 14 HELIX 16 AB7 GLY A 309 GLY A 322 1 14 HELIX 17 AB8 PRO A 323 SER A 328 5 6 HELIX 18 AB9 VAL A 339 GLY A 344 1 6 HELIX 19 AC1 MET A 348 ALA A 362 1 15 HELIX 20 AC2 HIS A 365 ILE A 372 1 8 HELIX 21 AC3 ILE A 372 GLY A 381 1 10 HELIX 22 AC4 ASP A 383 TYR A 395 1 13 HELIX 23 AC5 TYR A 399 GLY A 409 1 11 HELIX 24 AC6 SER A 427 MET A 434 1 8 HELIX 25 AC7 CYS A 454 ASN A 467 1 14 HELIX 26 AC8 ASN A 467 LYS A 472 1 6 HELIX 27 AC9 LEU A 477 ARG A 486 1 10 HELIX 28 AD1 SER A 488 HIS A 513 1 26 SHEET 1 AA1 5 VAL A 69 THR A 72 0 SHEET 2 AA1 5 THR A 28 CYS A 32 1 N ILE A 29 O ARG A 70 SHEET 3 AA1 5 LEU A 4 LEU A 6 1 N VAL A 5 O VAL A 30 SHEET 4 AA1 5 ILE A 99 THR A 102 1 O CYS A 100 N LEU A 4 SHEET 5 AA1 5 VAL A 124 ARG A 127 1 O ARG A 127 N VAL A 101 SHEET 1 AA2 2 MET A 166 ASN A 167 0 SHEET 2 AA2 2 GLN A 170 PRO A 171 -1 O GLN A 170 N ASN A 167 LINK SG CYS A 454 S1 SF4 A 603 1555 1555 1.89 LINK SG CYS A 350 FE3 SF4 A 603 1555 1555 2.28 LINK SG CYS A 438 FE1 SF4 A 603 1555 1555 2.31 LINK SG CYS A 441 FE4 SF4 A 603 1555 1555 2.32 LINK SG CYS A 454 FE2 SF4 A 603 1555 1555 2.25 CISPEP 1 ASP A 179 ALA A 180 0 -12.26 CISPEP 2 GLU A 181 ASN A 182 0 -8.99 SITE 1 AC1 25 PHE A 249 HIS A 265 SER A 266 LEU A 267 SITE 2 AC1 25 LEU A 268 SER A 269 ASN A 273 PHE A 303 SITE 3 AC1 25 GLN A 306 ILE A 307 ARG A 311 TYR A 363 SITE 4 AC1 25 ALA A 364 HIS A 366 ARG A 369 LEU A 370 SITE 5 AC1 25 TYR A 391 ASP A 397 ALA A 398 VAL A 402 SITE 6 AC1 25 GLU A 403 ASN A 406 HOH A 792 HOH A 810 SITE 7 AC1 25 HOH A 827 SITE 1 AC2 15 LEU A 8 GLY A 9 ASP A 10 CYS A 32 SITE 2 AC2 15 GLU A 33 VAL A 34 GLU A 37 TYR A 40 SITE 3 AC2 15 ILE A 51 PHE A 52 PHE A 83 PRO A 104 SITE 4 AC2 15 GLY A 105 GLU A 106 TYR A 399 SITE 1 AC3 5 CYS A 350 ILE A 431 CYS A 438 CYS A 441 SITE 2 AC3 5 CYS A 454 CRYST1 99.700 106.800 57.300 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010030 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009363 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017452 0.00000