HEADER IMMUNE SYSTEM 14-MAY-18 6DFI TITLE CRYSTAL STRUCTURE OF ANTI-ZIKA ANTIBODY Z021 BOUND TO ZIKA VIRUS TITLE 2 ENVELOPE PROTEIN DIII COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTI-ZIKA ANTIBODY Z021, HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ANTI-ZIKA ANTIBODY Z021, LIGHT CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: ZIKA VIRUS ENVELOPE PROTEIN DIII; COMPND 11 CHAIN: E; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: 293-6E; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 14 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 16 EXPRESSION_SYSTEM_CELL_LINE: 293-6E; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: ZIKA VIRUS; SOURCE 19 ORGANISM_COMMON: ZIKV; SOURCE 20 ORGANISM_TAXID: 64320; SOURCE 21 STRAIN: MR 766; SOURCE 22 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 23 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 24 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS ANTIBODY, FAB, ZIKA, DENGUE, RECURRENT, NEUTRALIZING, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.R.KEEFFE,P.J.BJORKMAN REVDAT 2 14-NOV-18 6DFI 1 JRNL REVDAT 1 24-OCT-18 6DFI 0 JRNL AUTH J.R.KEEFFE,K.K.A.VAN ROMPAY,P.C.OLSEN,Q.WANG,A.GAZUMYAN, JRNL AUTH 2 S.A.AZZOPARDI,D.SCHAEFER-BABAJEW,Y.E.LEE,J.B.STUART, JRNL AUTH 3 A.SINGAPURI,J.WATANABE,J.USACHENKO,A.ARDESHIR,M.SAEED, JRNL AUTH 4 M.AGUDELO,T.EISENREICH,S.BOURNAZOS,T.Y.OLIVEIRA,C.M.RICE, JRNL AUTH 5 L.L.COFFEY,M.R.MACDONALD,P.J.BJORKMAN,M.C.NUSSENZWEIG, JRNL AUTH 6 D.F.ROBBIANI JRNL TITL A COMBINATION OF TWO HUMAN MONOCLONAL ANTIBODIES PREVENTS JRNL TITL 2 ZIKA VIRUS ESCAPE MUTATIONS IN NON-HUMAN PRIMATES. JRNL REF CELL REP V. 25 1385 2018 JRNL REFN ESSN 2211-1247 JRNL PMID 30403995 JRNL DOI 10.1016/J.CELREP.2018.10.031 REMARK 2 REMARK 2 RESOLUTION. 2.48 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.48 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 75.25 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 30462 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.870 REMARK 3 FREE R VALUE TEST SET COUNT : 1482 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 75.2900 - 5.5100 0.99 2832 113 0.1824 0.2145 REMARK 3 2 5.5100 - 4.3700 1.00 2684 134 0.1609 0.2144 REMARK 3 3 4.3700 - 3.8200 1.00 2620 166 0.1736 0.2357 REMARK 3 4 3.8200 - 3.4700 0.99 2626 142 0.1776 0.2248 REMARK 3 5 3.4700 - 3.2200 1.00 2603 141 0.1763 0.2298 REMARK 3 6 3.2200 - 3.0300 1.00 2632 133 0.1810 0.1986 REMARK 3 7 3.0300 - 2.8800 1.00 2619 128 0.1868 0.2294 REMARK 3 8 2.8800 - 2.7500 0.98 2548 131 0.1889 0.2178 REMARK 3 9 2.7500 - 2.6500 1.00 2614 127 0.2036 0.2479 REMARK 3 10 2.6500 - 2.5600 1.00 2584 134 0.2270 0.2617 REMARK 3 11 2.5600 - 2.4800 1.00 2618 133 0.2698 0.3410 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.288 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.301 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 44.52 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4201 REMARK 3 ANGLE : 0.910 5732 REMARK 3 CHIRALITY : 0.053 654 REMARK 3 PLANARITY : 0.006 729 REMARK 3 DIHEDRAL : 12.084 2510 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'H' AND RESID 1 THROUGH 113) REMARK 3 ORIGIN FOR THE GROUP (A): -7.0954 -23.7073 6.2317 REMARK 3 T TENSOR REMARK 3 T11: 0.2450 T22: 0.2595 REMARK 3 T33: 0.2375 T12: 0.0456 REMARK 3 T13: -0.0560 T23: -0.0305 REMARK 3 L TENSOR REMARK 3 L11: 2.5230 L22: 2.1137 REMARK 3 L33: 2.7854 L12: 0.7943 REMARK 3 L13: -0.7872 L23: -0.5333 REMARK 3 S TENSOR REMARK 3 S11: 0.0028 S12: 0.1061 S13: 0.0051 REMARK 3 S21: 0.0367 S22: 0.1261 S23: 0.1897 REMARK 3 S31: -0.0970 S32: 0.0603 S33: -0.1143 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'H' AND RESID 114 THROUGH 215) REMARK 3 ORIGIN FOR THE GROUP (A): 22.0288 -10.2846 4.0457 REMARK 3 T TENSOR REMARK 3 T11: 0.2540 T22: 0.2932 REMARK 3 T33: 0.2712 T12: 0.0163 REMARK 3 T13: 0.0320 T23: -0.0398 REMARK 3 L TENSOR REMARK 3 L11: 3.6226 L22: 3.2381 REMARK 3 L33: 6.1082 L12: 0.4449 REMARK 3 L13: 2.2262 L23: 0.2442 REMARK 3 S TENSOR REMARK 3 S11: -0.0655 S12: -0.1157 S13: 0.0061 REMARK 3 S21: 0.1872 S22: 0.1448 S23: -0.2800 REMARK 3 S31: -0.2008 S32: 0.1729 S33: -0.0897 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN 'L' AND RESID 1 THROUGH 107) REMARK 3 ORIGIN FOR THE GROUP (A): -8.5633 -8.4157 22.2360 REMARK 3 T TENSOR REMARK 3 T11: 0.3456 T22: 0.3139 REMARK 3 T33: 0.2423 T12: 0.0606 REMARK 3 T13: 0.0352 T23: -0.0441 REMARK 3 L TENSOR REMARK 3 L11: 3.8158 L22: 4.8748 REMARK 3 L33: 2.3878 L12: 2.5467 REMARK 3 L13: 0.5840 L23: 0.7020 REMARK 3 S TENSOR REMARK 3 S11: 0.0357 S12: -0.1925 S13: 0.3311 REMARK 3 S21: 0.4271 S22: 0.0141 S23: 0.2879 REMARK 3 S31: -0.2237 S32: -0.0269 S33: -0.0521 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN 'L' AND RESID 108 THROUGH 213) REMARK 3 ORIGIN FOR THE GROUP (A): 21.2739 5.4783 3.8384 REMARK 3 T TENSOR REMARK 3 T11: 0.3938 T22: 0.3093 REMARK 3 T33: 0.3594 T12: -0.0092 REMARK 3 T13: -0.0036 T23: -0.0222 REMARK 3 L TENSOR REMARK 3 L11: 1.3052 L22: 2.3058 REMARK 3 L33: 7.9265 L12: -0.3388 REMARK 3 L13: -1.4557 L23: 2.9095 REMARK 3 S TENSOR REMARK 3 S11: -0.1026 S12: 0.0155 S13: 0.1145 REMARK 3 S21: -0.2813 S22: 0.1205 S23: -0.1353 REMARK 3 S31: -0.4156 S32: -0.1409 S33: -0.0409 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN 'E' AND RESID 303 THROUGH 404) REMARK 3 ORIGIN FOR THE GROUP (A): -25.6916 -39.1050 25.8888 REMARK 3 T TENSOR REMARK 3 T11: 0.2635 T22: 0.3571 REMARK 3 T33: 0.3879 T12: 0.0388 REMARK 3 T13: -0.0143 T23: 0.0319 REMARK 3 L TENSOR REMARK 3 L11: 1.0218 L22: 5.8192 REMARK 3 L33: 3.1233 L12: 1.4317 REMARK 3 L13: -0.5798 L23: -1.7988 REMARK 3 S TENSOR REMARK 3 S11: 0.1513 S12: -0.0746 S13: 0.0633 REMARK 3 S21: -0.0054 S22: -0.0494 S23: 0.6116 REMARK 3 S31: 0.0272 S32: -0.2220 S33: -0.1232 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6DFI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-MAY-18. REMARK 100 THE DEPOSITION ID IS D_1000234362. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-OCT-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30524 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.480 REMARK 200 RESOLUTION RANGE LOW (A) : 75.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.48 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.57 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.48600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES PH 7.0, 29% PEG 1000, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.94050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.62000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.81100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.62000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.94050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 52.81100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 CYS H 216 REMARK 465 ASP H 217 REMARK 465 LYS H 218 REMARK 465 THR H 219 REMARK 465 HIS H 220 REMARK 465 HIS H 221 REMARK 465 HIS H 222 REMARK 465 HIS H 223 REMARK 465 HIS H 224 REMARK 465 HIS H 225 REMARK 465 CYS L 214 REMARK 465 MET E 298 REMARK 465 ARG E 299 REMARK 465 LEU E 300 REMARK 465 LYS E 301 REMARK 465 GLY E 302 REMARK 465 SER E 405 REMARK 465 THR E 406 REMARK 465 ILE E 407 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS H 92 CA - CB - SG ANGL. DEV. = 6.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR H 32 166.58 76.61 REMARK 500 VAL H 55 -62.00 -124.86 REMARK 500 SER H 127 -126.00 -140.98 REMARK 500 GLN H 192 131.06 -172.81 REMARK 500 PRO H 213 171.07 -51.96 REMARK 500 LYS H 214 -71.89 -80.71 REMARK 500 VAL L 29 -76.10 -120.30 REMARK 500 THR L 51 -46.52 71.88 REMARK 500 ALA L 84 174.43 175.28 REMARK 500 ASN L 138 75.69 49.05 REMARK 500 ALA L 144 142.46 -171.12 REMARK 500 ARG L 211 100.53 -55.54 REMARK 500 ALA E 361 99.27 -68.23 REMARK 500 ASN E 362 89.03 55.85 REMARK 500 REMARK 500 REMARK: NULL DBREF 6DFI H 1 225 PDB 6DFI 6DFI 1 225 DBREF 6DFI L 1 214 PDB 6DFI 6DFI 1 214 DBREF1 6DFI E 299 407 UNP A0A172HA03_ZIKV DBREF2 6DFI E A0A172HA03 589 697 SEQADV 6DFI MET E 298 UNP A0A172HA0 INITIATING METHIONINE SEQRES 1 H 230 GLN VAL GLN LEU GLN GLU SER GLY PRO GLY LEU VAL LYS SEQRES 2 H 230 PRO SER GLU THR LEU SER LEU THR CYS THR VAL SER GLY SEQRES 3 H 230 GLY SER ILE ASP THR TYR TYR TRP SER TRP ILE ARG GLN SEQRES 4 H 230 THR PRO GLY LYS GLY LEU GLU TRP ILE GLY CYS PHE TYR SEQRES 5 H 230 TYR SER VAL ASP ASN HIS PHE ASN PRO SER LEU GLU SER SEQRES 6 H 230 ARG VAL THR ILE SER VAL ASP THR SER LYS ASN GLN PHE SEQRES 7 H 230 SER LEU LYS MET THR SER MET THR ALA SER ASP THR ALA SEQRES 8 H 230 VAL TYR TYR CYS ALA ARG ASN GLN PRO GLY GLY ARG ALA SEQRES 9 H 230 PHE ASP TYR TRP GLY PRO GLY THR LEU VAL THR VAL SER SEQRES 10 H 230 SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA SEQRES 11 H 230 PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU SEQRES 12 H 230 GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR SEQRES 13 H 230 VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS SEQRES 14 H 230 THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER SEQRES 15 H 230 LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY SEQRES 16 H 230 THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER SEQRES 17 H 230 ASN THR LYS VAL ASP LYS ARG VAL GLU PRO LYS SER CYS SEQRES 18 H 230 ASP LYS THR HIS HIS HIS HIS HIS HIS SEQRES 1 L 216 GLU ILE VAL LEU THR GLN SER PRO ALA THR LEU SER LEU SEQRES 2 L 216 SER PRO GLY GLN ARG ALA THR LEU SER CYS ARG ALA SER SEQRES 3 L 216 GLN SER VAL SER ASN TYR PHE ALA TRP TYR GLN GLN LYS SEQRES 4 L 216 PRO GLY GLN ALA PRO ARG LEU LEU ILE TYR ASP THR SER SEQRES 5 L 216 LYS ARG ALA THR GLY THR PRO ALA ARG PHE SER GLY SER SEQRES 6 L 216 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 L 216 GLU PRO GLU ASP PHE ALA VAL TYR TYR CYS GLN GLU ARG SEQRES 8 L 216 ASN ASN TRP PRO LEU THR TRP THR PHE GLY LEU GLY THR SEQRES 9 L 216 LYS VAL GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL SEQRES 10 L 216 PHE ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY SEQRES 11 L 216 THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO SEQRES 12 L 216 ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU SEQRES 13 L 216 GLN SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SEQRES 14 L 216 SER LYS ASP SER THR TYR SER LEU SER SER THR LEU THR SEQRES 15 L 216 LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA SEQRES 16 L 216 CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR SEQRES 17 L 216 LYS SER PHE ASN ARG GLY GLU CYS SEQRES 1 E 110 MET ARG LEU LYS GLY VAL SER TYR SER LEU CYS THR ALA SEQRES 2 E 110 ALA PHE THR PHE THR LYS ILE PRO ALA GLU THR LEU HIS SEQRES 3 E 110 GLY THR VAL THR VAL GLU VAL GLN TYR ALA GLY THR ASP SEQRES 4 E 110 GLY PRO CYS LYS VAL PRO ALA GLN MET ALA VAL ASP MET SEQRES 5 E 110 GLN THR LEU THR PRO VAL GLY ARG LEU ILE THR ALA ASN SEQRES 6 E 110 PRO VAL ILE THR GLU SER THR GLU ASN SER LYS MET MET SEQRES 7 E 110 LEU GLU LEU ASP PRO PRO PHE GLY ASP SER TYR ILE VAL SEQRES 8 E 110 ILE GLY VAL GLY GLU LYS LYS ILE THR HIS HIS TRP HIS SEQRES 9 E 110 ARG SER GLY SER THR ILE FORMUL 4 HOH *68(H2 O) HELIX 1 AA1 LEU H 63 SER H 65 5 3 HELIX 2 AA2 THR H 83 THR H 87 5 5 HELIX 3 AA3 SER H 156 ALA H 158 5 3 HELIX 4 AA4 PRO H 185 LEU H 189 5 5 HELIX 5 AA5 LYS H 201 ASN H 204 5 4 HELIX 6 AA6 GLU L 79 PHE L 83 5 5 HELIX 7 AA7 SER L 121 SER L 127 1 7 HELIX 8 AA8 LYS L 183 GLU L 187 1 5 SHEET 1 AA1 4 GLN H 3 SER H 7 0 SHEET 2 AA1 4 LEU H 18 SER H 25 -1 O SER H 25 N GLN H 3 SHEET 3 AA1 4 GLN H 77 MET H 82 -1 O PHE H 78 N CYS H 22 SHEET 4 AA1 4 VAL H 67 ASP H 72 -1 N ASP H 72 O GLN H 77 SHEET 1 AA2 6 LEU H 11 VAL H 12 0 SHEET 2 AA2 6 THR H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 AA2 6 ALA H 88 ASN H 95 -1 N TYR H 90 O THR H 107 SHEET 4 AA2 6 TYR H 33 THR H 40 -1 N ILE H 37 O TYR H 91 SHEET 5 AA2 6 GLY H 44 TYR H 52 -1 O GLU H 46 N ARG H 38 SHEET 6 AA2 6 ASP H 56 PHE H 59 -1 O HIS H 58 N CYS H 50 SHEET 1 AA3 4 LEU H 11 VAL H 12 0 SHEET 2 AA3 4 THR H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 AA3 4 ALA H 88 ASN H 95 -1 N TYR H 90 O THR H 107 SHEET 4 AA3 4 PHE H 100B TRP H 103 -1 O TYR H 102 N ARG H 94 SHEET 1 AA4 4 SER H 120 LEU H 124 0 SHEET 2 AA4 4 THR H 135 TYR H 145 -1 O GLY H 139 N LEU H 124 SHEET 3 AA4 4 TYR H 176 VAL H 184 -1 O LEU H 178 N VAL H 142 SHEET 4 AA4 4 VAL H 163 THR H 165 -1 N HIS H 164 O VAL H 181 SHEET 1 AA5 4 THR H 131 SER H 132 0 SHEET 2 AA5 4 THR H 135 TYR H 145 -1 O THR H 135 N SER H 132 SHEET 3 AA5 4 TYR H 176 VAL H 184 -1 O LEU H 178 N VAL H 142 SHEET 4 AA5 4 VAL H 169 LEU H 170 -1 N VAL H 169 O SER H 177 SHEET 1 AA6 3 THR H 151 TRP H 154 0 SHEET 2 AA6 3 ILE H 195 HIS H 200 -1 O ASN H 197 N SER H 153 SHEET 3 AA6 3 THR H 205 ARG H 210 -1 O VAL H 207 N VAL H 198 SHEET 1 AA7 4 LEU L 4 SER L 7 0 SHEET 2 AA7 4 ALA L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AA7 4 ASP L 70 ILE L 75 -1 O PHE L 71 N CYS L 23 SHEET 4 AA7 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AA8 6 THR L 10 LEU L 13 0 SHEET 2 AA8 6 THR L 102 ILE L 106 1 O GLU L 105 N LEU L 11 SHEET 3 AA8 6 ALA L 84 ASN L 92 -1 N ALA L 84 O VAL L 104 SHEET 4 AA8 6 ALA L 34 GLN L 38 -1 N GLN L 38 O VAL L 85 SHEET 5 AA8 6 ARG L 45 TYR L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 AA8 6 LYS L 53 ARG L 54 -1 O LYS L 53 N TYR L 49 SHEET 1 AA9 4 THR L 10 LEU L 13 0 SHEET 2 AA9 4 THR L 102 ILE L 106 1 O GLU L 105 N LEU L 11 SHEET 3 AA9 4 ALA L 84 ASN L 92 -1 N ALA L 84 O VAL L 104 SHEET 4 AA9 4 THR L 95B PHE L 98 -1 O THR L 97 N GLU L 90 SHEET 1 AB1 4 SER L 114 PHE L 118 0 SHEET 2 AB1 4 THR L 129 PHE L 139 -1 O LEU L 135 N PHE L 116 SHEET 3 AB1 4 TYR L 173 SER L 182 -1 O LEU L 179 N VAL L 132 SHEET 4 AB1 4 SER L 159 VAL L 163 -1 N SER L 162 O SER L 176 SHEET 1 AB2 4 ALA L 153 LEU L 154 0 SHEET 2 AB2 4 LYS L 145 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 AB2 4 VAL L 191 THR L 197 -1 O ALA L 193 N LYS L 149 SHEET 4 AB2 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SHEET 1 AB3 3 PHE E 312 PHE E 314 0 SHEET 2 AB3 3 VAL E 326 TYR E 332 -1 O GLN E 331 N THR E 313 SHEET 3 AB3 3 ALA E 319 GLU E 320 -1 N ALA E 319 O THR E 327 SHEET 1 AB4 4 PHE E 312 PHE E 314 0 SHEET 2 AB4 4 VAL E 326 TYR E 332 -1 O GLN E 331 N THR E 313 SHEET 3 AB4 4 SER E 372 ASP E 379 -1 O LEU E 376 N VAL E 328 SHEET 4 AB4 4 ARG E 357 LEU E 358 -1 N ARG E 357 O ASP E 379 SHEET 1 AB5 2 CYS E 339 LYS E 340 0 SHEET 2 AB5 2 VAL E 364 ILE E 365 -1 O ILE E 365 N CYS E 339 SHEET 1 AB6 3 ALA E 343 ALA E 346 0 SHEET 2 AB6 3 GLY E 383 ILE E 389 -1 O VAL E 388 N GLN E 344 SHEET 3 AB6 3 ILE E 396 ARG E 402 -1 O ARG E 402 N GLY E 383 SSBOND 1 CYS H 22 CYS H 92 1555 1555 2.08 SSBOND 2 CYS H 140 CYS H 196 1555 1555 2.04 SSBOND 3 CYS L 23 CYS L 88 1555 1555 2.08 SSBOND 4 CYS L 134 CYS L 194 1555 1555 2.00 SSBOND 5 CYS E 308 CYS E 339 1555 1555 2.06 CISPEP 1 PHE H 146 PRO H 147 0 -5.95 CISPEP 2 GLU H 148 PRO H 149 0 -0.69 CISPEP 3 SER L 7 PRO L 8 0 -7.02 CISPEP 4 TRP L 94 PRO L 95 0 -3.27 CISPEP 5 TYR L 140 PRO L 141 0 1.53 CISPEP 6 GLY E 337 PRO E 338 0 -1.16 CRYST1 73.881 105.622 107.240 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013535 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009468 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009325 0.00000