HEADER VIRAL PROTEIN 17-MAY-18 6DGK TITLE CRYSTAL STRUCTURE OF THE NON-STRUCTURAL PROTEIN 1 (NS1) EFFECTOR TITLE 2 DOMAIN W187A MUTANT FROM THE A/BREVIG MISSION/1/1918 (H1N1) STRAIN OF TITLE 3 INFLUENZA A VIRUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: NON-STRUCTURAL PROTEIN 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: EFFECTOR DOMAIN; COMPND 5 SYNONYM: NS1,NS1A; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS (STRAIN A/BREVIG SOURCE 3 MISSION/1/1918 H1N1); SOURCE 4 ORGANISM_TAXID: 88776; SOURCE 5 STRAIN: A/BREVIG MISSION/1/1918 H1N1; SOURCE 6 GENE: NS; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) STAR; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET SUMO KEYWDS INFLUENZA, NS1, EFFECTOR DOMAIN, W187A, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.B.KLEINPETER,T.J.GREEN,C.M.PETIT REVDAT 4 13-MAR-24 6DGK 1 REMARK REVDAT 3 18-DEC-19 6DGK 1 REMARK REVDAT 2 03-OCT-18 6DGK 1 JRNL REVDAT 1 15-AUG-18 6DGK 0 JRNL AUTH A.B.KLEINPETER,A.S.JUREKA,S.M.FALAHAT,T.J.GREEN,C.M.PETIT JRNL TITL STRUCTURAL ANALYSES REVEAL THE MECHANISM OF INHIBITION OF JRNL TITL 2 INFLUENZA VIRUS NS1 BY TWO ANTIVIRAL COMPOUNDS. JRNL REF J. BIOL. CHEM. V. 293 14659 2018 JRNL REFN ESSN 1083-351X JRNL PMID 30076219 JRNL DOI 10.1074/JBC.RA118.004012 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.67 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 19474 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.460 REMARK 3 FREE R VALUE TEST SET COUNT : 1452 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.6739 - 4.0902 0.97 1899 154 0.1479 0.1732 REMARK 3 2 4.0902 - 3.2479 0.99 1854 148 0.1508 0.1976 REMARK 3 3 3.2479 - 2.8377 0.99 1830 147 0.1772 0.2339 REMARK 3 4 2.8377 - 2.5784 0.99 1790 144 0.1825 0.2178 REMARK 3 5 2.5784 - 2.3937 0.99 1798 146 0.1887 0.2150 REMARK 3 6 2.3937 - 2.2526 0.99 1787 144 0.1744 0.2374 REMARK 3 7 2.2526 - 2.1398 0.99 1764 142 0.1825 0.2229 REMARK 3 8 2.1398 - 2.0467 0.99 1762 142 0.1864 0.2616 REMARK 3 9 2.0467 - 1.9679 0.98 1777 142 0.2122 0.2562 REMARK 3 10 1.9679 - 1.9000 0.98 1761 143 0.2167 0.2967 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.500 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.85 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1914 REMARK 3 ANGLE : 0.797 2586 REMARK 3 CHIRALITY : 0.056 302 REMARK 3 PLANARITY : 0.004 332 REMARK 3 DIHEDRAL : 11.855 1174 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 19 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 86 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.2114 -0.6735 -13.8923 REMARK 3 T TENSOR REMARK 3 T11: 0.1407 T22: 0.1767 REMARK 3 T33: 0.1714 T12: 0.0325 REMARK 3 T13: -0.0016 T23: -0.0195 REMARK 3 L TENSOR REMARK 3 L11: 6.4681 L22: 9.2598 REMARK 3 L33: 7.2963 L12: -0.1408 REMARK 3 L13: -0.5532 L23: -0.5016 REMARK 3 S TENSOR REMARK 3 S11: -0.1026 S12: -0.1488 S13: 0.1515 REMARK 3 S21: 0.2028 S22: 0.3469 S23: 0.1075 REMARK 3 S31: 0.1708 S32: 0.0895 S33: -0.2111 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 100 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.1856 -14.5746 -0.5014 REMARK 3 T TENSOR REMARK 3 T11: 0.5790 T22: 0.6247 REMARK 3 T33: 0.2645 T12: 0.1028 REMARK 3 T13: -0.0081 T23: 0.1256 REMARK 3 L TENSOR REMARK 3 L11: 5.4594 L22: 4.6146 REMARK 3 L33: 6.7840 L12: 0.4978 REMARK 3 L13: -0.1694 L23: -5.6800 REMARK 3 S TENSOR REMARK 3 S11: -0.7532 S12: -1.6678 S13: -0.4631 REMARK 3 S21: 1.4576 S22: 1.0537 S23: 0.3202 REMARK 3 S31: -0.1674 S32: -0.3556 S33: 0.1098 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 107 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.0246 -17.2316 -7.1078 REMARK 3 T TENSOR REMARK 3 T11: 0.4088 T22: 0.5366 REMARK 3 T33: 0.4549 T12: 0.1871 REMARK 3 T13: 0.0265 T23: 0.1389 REMARK 3 L TENSOR REMARK 3 L11: 3.7618 L22: 6.6597 REMARK 3 L33: 4.9647 L12: 3.7615 REMARK 3 L13: -2.4357 L23: -4.9710 REMARK 3 S TENSOR REMARK 3 S11: -0.7448 S12: -1.6293 S13: -1.0994 REMARK 3 S21: 0.0023 S22: -0.2690 S23: -1.3768 REMARK 3 S31: 1.1426 S32: 1.4261 S33: 0.8018 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 121 THROUGH 136 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.2238 -15.6752 -12.8800 REMARK 3 T TENSOR REMARK 3 T11: 0.2320 T22: 0.1957 REMARK 3 T33: 0.1725 T12: -0.0066 REMARK 3 T13: -0.0132 T23: 0.0266 REMARK 3 L TENSOR REMARK 3 L11: 3.8223 L22: 8.4232 REMARK 3 L33: 4.5737 L12: 1.3726 REMARK 3 L13: -0.5287 L23: -2.1023 REMARK 3 S TENSOR REMARK 3 S11: 0.1784 S12: -0.4252 S13: 0.0103 REMARK 3 S21: -0.0107 S22: 0.0552 S23: 0.7910 REMARK 3 S31: 0.6985 S32: -0.1365 S33: -0.1339 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 137 THROUGH 143 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.8644 0.0431 -25.7526 REMARK 3 T TENSOR REMARK 3 T11: 0.3079 T22: 0.2992 REMARK 3 T33: 0.3694 T12: -0.0095 REMARK 3 T13: 0.1818 T23: 0.0283 REMARK 3 L TENSOR REMARK 3 L11: 2.8631 L22: 3.9546 REMARK 3 L33: 6.2826 L12: 2.3768 REMARK 3 L13: -0.3641 L23: 0.5712 REMARK 3 S TENSOR REMARK 3 S11: 0.0286 S12: -0.0309 S13: 0.0127 REMARK 3 S21: -0.6091 S22: 0.3705 S23: -0.4412 REMARK 3 S31: -0.6060 S32: 0.3111 S33: -0.2048 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 144 THROUGH 162 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.2231 -11.8097 -9.9770 REMARK 3 T TENSOR REMARK 3 T11: 0.1530 T22: 0.1922 REMARK 3 T33: 0.3096 T12: 0.0228 REMARK 3 T13: -0.0023 T23: 0.0225 REMARK 3 L TENSOR REMARK 3 L11: 2.7161 L22: 3.6873 REMARK 3 L33: 6.8412 L12: -2.8905 REMARK 3 L13: -0.3858 L23: -2.0407 REMARK 3 S TENSOR REMARK 3 S11: 0.2581 S12: -0.4953 S13: 0.3861 REMARK 3 S21: 0.4858 S22: 0.3220 S23: 0.9693 REMARK 3 S31: -0.0606 S32: -0.3690 S33: -0.2951 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 163 THROUGH 170 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.7277 -7.0487 -11.5187 REMARK 3 T TENSOR REMARK 3 T11: 0.3874 T22: 0.6500 REMARK 3 T33: 0.9422 T12: -0.1305 REMARK 3 T13: 0.0119 T23: 0.0257 REMARK 3 L TENSOR REMARK 3 L11: 5.5929 L22: 0.9626 REMARK 3 L33: 4.2643 L12: -0.9880 REMARK 3 L13: 4.6734 L23: -0.1938 REMARK 3 S TENSOR REMARK 3 S11: 0.0526 S12: -0.8177 S13: 0.9146 REMARK 3 S21: 0.2448 S22: -0.3115 S23: -1.1318 REMARK 3 S31: -0.0565 S32: 1.0546 S33: 0.3521 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 171 THROUGH 195 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.3721 -19.7342 -16.6832 REMARK 3 T TENSOR REMARK 3 T11: 0.4465 T22: 0.1571 REMARK 3 T33: 0.2220 T12: 0.0650 REMARK 3 T13: -0.0020 T23: -0.0430 REMARK 3 L TENSOR REMARK 3 L11: 4.4655 L22: 5.9788 REMARK 3 L33: 5.2520 L12: -1.7754 REMARK 3 L13: 1.3034 L23: -1.3681 REMARK 3 S TENSOR REMARK 3 S11: 0.0575 S12: 0.1898 S13: -0.3495 REMARK 3 S21: -0.5082 S22: 0.1175 S23: 0.0894 REMARK 3 S31: 1.1142 S32: 0.1188 S33: -0.0604 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 196 THROUGH 205 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.2652 -9.8987 -26.9089 REMARK 3 T TENSOR REMARK 3 T11: 0.3231 T22: 0.2867 REMARK 3 T33: 0.2282 T12: 0.0200 REMARK 3 T13: 0.0136 T23: 0.0050 REMARK 3 L TENSOR REMARK 3 L11: 7.3817 L22: 6.0088 REMARK 3 L33: 5.3784 L12: -0.1189 REMARK 3 L13: -4.5891 L23: 3.9798 REMARK 3 S TENSOR REMARK 3 S11: -0.0906 S12: 0.7757 S13: 0.4468 REMARK 3 S21: -0.7031 S22: 0.1966 S23: 0.0881 REMARK 3 S31: -0.1259 S32: -0.2005 S33: -0.1867 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 86 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.5590 -31.2457 -38.6027 REMARK 3 T TENSOR REMARK 3 T11: 0.1563 T22: 0.1425 REMARK 3 T33: 0.1668 T12: -0.0511 REMARK 3 T13: 0.0008 T23: 0.0019 REMARK 3 L TENSOR REMARK 3 L11: 6.1440 L22: 7.5589 REMARK 3 L33: 7.2869 L12: 1.4043 REMARK 3 L13: -0.5629 L23: -0.9680 REMARK 3 S TENSOR REMARK 3 S11: -0.1108 S12: -0.0348 S13: -0.0933 REMARK 3 S21: -0.3215 S22: 0.2889 S23: 0.1060 REMARK 3 S31: 0.0200 S32: -0.3755 S33: -0.1195 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 100 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.5682 -17.9665 -52.5030 REMARK 3 T TENSOR REMARK 3 T11: 0.4234 T22: 0.4777 REMARK 3 T33: 0.3528 T12: 0.0295 REMARK 3 T13: -0.0572 T23: 0.0418 REMARK 3 L TENSOR REMARK 3 L11: 4.1032 L22: 4.4953 REMARK 3 L33: 6.9963 L12: 2.2496 REMARK 3 L13: -1.5448 L23: -5.4781 REMARK 3 S TENSOR REMARK 3 S11: -0.3626 S12: 0.3936 S13: 0.3990 REMARK 3 S21: -1.1353 S22: -0.1911 S23: 0.2510 REMARK 3 S31: 0.3787 S32: -0.0394 S33: 0.4507 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 107 THROUGH 112 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.7059 -13.2992 -46.7683 REMARK 3 T TENSOR REMARK 3 T11: 0.3617 T22: 0.9432 REMARK 3 T33: 0.4836 T12: -0.2706 REMARK 3 T13: -0.0583 T23: 0.5031 REMARK 3 L TENSOR REMARK 3 L11: 6.2047 L22: 5.4147 REMARK 3 L33: 2.9751 L12: -3.5956 REMARK 3 L13: 2.2349 L23: 1.3388 REMARK 3 S TENSOR REMARK 3 S11: 0.8471 S12: -0.3173 S13: 1.1290 REMARK 3 S21: -0.1580 S22: -1.2760 S23: -0.1723 REMARK 3 S31: -1.0424 S32: 0.2511 S33: -0.7266 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 113 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.8584 -12.4063 -45.5912 REMARK 3 T TENSOR REMARK 3 T11: 0.2844 T22: 0.3021 REMARK 3 T33: 0.2572 T12: -0.0823 REMARK 3 T13: -0.0077 T23: 0.1076 REMARK 3 L TENSOR REMARK 3 L11: 7.8286 L22: 4.9239 REMARK 3 L33: 8.1573 L12: -1.1565 REMARK 3 L13: 2.5046 L23: -3.0282 REMARK 3 S TENSOR REMARK 3 S11: 0.1040 S12: 1.4662 S13: 0.8518 REMARK 3 S21: 0.1517 S22: -0.6571 S23: -0.3510 REMARK 3 S31: -0.7353 S32: 0.5734 S33: 0.3146 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 127 THROUGH 136 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.9275 -22.4775 -36.0568 REMARK 3 T TENSOR REMARK 3 T11: 0.0813 T22: 0.1753 REMARK 3 T33: 0.1712 T12: -0.0051 REMARK 3 T13: 0.0336 T23: 0.0045 REMARK 3 L TENSOR REMARK 3 L11: 8.6687 L22: 2.8078 REMARK 3 L33: 6.5051 L12: -4.4141 REMARK 3 L13: 4.7716 L23: -3.4462 REMARK 3 S TENSOR REMARK 3 S11: -0.0142 S12: 0.2225 S13: -0.1747 REMARK 3 S21: 0.4352 S22: 0.0748 S23: 0.4406 REMARK 3 S31: -0.2656 S32: -0.1661 S33: -0.1366 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 137 THROUGH 143 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.0838 -31.8120 -26.3998 REMARK 3 T TENSOR REMARK 3 T11: 0.3727 T22: 0.3117 REMARK 3 T33: 0.2755 T12: 0.0513 REMARK 3 T13: -0.0988 T23: 0.0334 REMARK 3 L TENSOR REMARK 3 L11: 7.2779 L22: 6.0275 REMARK 3 L33: 2.0866 L12: -1.8577 REMARK 3 L13: 3.8464 L23: -1.4413 REMARK 3 S TENSOR REMARK 3 S11: 0.1813 S12: -0.0555 S13: 0.2067 REMARK 3 S21: 0.7813 S22: 0.6110 S23: -0.1055 REMARK 3 S31: 1.1601 S32: 0.2916 S33: -0.1647 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 144 THROUGH 162 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.3254 -20.3654 -42.8406 REMARK 3 T TENSOR REMARK 3 T11: 0.1418 T22: 0.1769 REMARK 3 T33: 0.1659 T12: -0.0270 REMARK 3 T13: -0.0241 T23: 0.0038 REMARK 3 L TENSOR REMARK 3 L11: 3.7392 L22: 6.5425 REMARK 3 L33: 5.9821 L12: -0.0295 REMARK 3 L13: 2.1998 L23: -2.2354 REMARK 3 S TENSOR REMARK 3 S11: 0.0162 S12: 0.2478 S13: 0.1145 REMARK 3 S21: -0.4055 S22: 0.0114 S23: 0.2831 REMARK 3 S31: 0.0275 S32: -0.0932 S33: 0.0530 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 163 THROUGH 170 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.4203 -25.7894 -39.6580 REMARK 3 T TENSOR REMARK 3 T11: 0.4245 T22: 1.0023 REMARK 3 T33: 0.6848 T12: 0.0955 REMARK 3 T13: 0.1517 T23: -0.0811 REMARK 3 L TENSOR REMARK 3 L11: 1.1695 L22: 4.5229 REMARK 3 L33: 6.8018 L12: 1.3351 REMARK 3 L13: -1.9988 L23: -5.4275 REMARK 3 S TENSOR REMARK 3 S11: -0.4848 S12: 1.1820 S13: -1.0771 REMARK 3 S21: -0.6162 S22: -0.3453 S23: -1.4797 REMARK 3 S31: 1.3899 S32: 2.7418 S33: 0.2729 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 171 THROUGH 195 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.1007 -12.3165 -36.1666 REMARK 3 T TENSOR REMARK 3 T11: 0.3009 T22: 0.1330 REMARK 3 T33: 0.1652 T12: -0.0436 REMARK 3 T13: 0.0031 T23: -0.0339 REMARK 3 L TENSOR REMARK 3 L11: 3.6018 L22: 8.8843 REMARK 3 L33: 6.8954 L12: -0.9072 REMARK 3 L13: -0.8839 L23: -3.6054 REMARK 3 S TENSOR REMARK 3 S11: 0.0223 S12: -0.0663 S13: 0.5660 REMARK 3 S21: 0.4856 S22: -0.0174 S23: 0.0168 REMARK 3 S31: -0.8315 S32: 0.1733 S33: -0.0268 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 196 THROUGH 205 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.5259 -21.8783 -25.8428 REMARK 3 T TENSOR REMARK 3 T11: 0.2890 T22: 0.2966 REMARK 3 T33: 0.1941 T12: 0.0723 REMARK 3 T13: 0.0155 T23: 0.0099 REMARK 3 L TENSOR REMARK 3 L11: 5.4944 L22: 8.2527 REMARK 3 L33: 4.5617 L12: 1.8603 REMARK 3 L13: 4.9537 L23: 1.7931 REMARK 3 S TENSOR REMARK 3 S11: -0.1121 S12: -0.4505 S13: -0.0431 REMARK 3 S21: 1.1301 S22: 0.4981 S23: 0.5982 REMARK 3 S31: 0.1563 S32: -0.2746 S33: -0.2818 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6DGK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-MAY-18. REMARK 100 THE DEPOSITION ID IS D_1000234581. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19479 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 29.670 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 54.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.24700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 8.990 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 3350, 0.2M DI-AMMONIUM REMARK 280 TARTRATE, EVAPORATION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 16.39250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.48750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.87200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.48750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 16.39250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.87200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 34.87200 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -52.48750 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 142 O HOH A 301 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 114 42.65 -97.29 REMARK 500 GLU A 142 -70.82 -112.28 REMARK 500 GLU A 153 0.05 -65.65 REMARK 500 GLU B 142 -71.60 -101.96 REMARK 500 PRO B 167 -174.54 -69.24 REMARK 500 REMARK 500 REMARK: NULL DBREF 6DGK A 86 205 UNP Q99AU3 NS1_I18A0 86 205 DBREF 6DGK B 86 205 UNP Q99AU3 NS1_I18A0 86 205 SEQADV 6DGK ALA A 187 UNP Q99AU3 TRP 187 ENGINEERED MUTATION SEQADV 6DGK ALA B 187 UNP Q99AU3 TRP 187 ENGINEERED MUTATION SEQRES 1 A 120 ALA SER ARG TYR LEU THR ASP MET THR LEU GLU GLU MET SEQRES 2 A 120 SER ARG ASP TRP PHE MET LEU MET PRO LYS GLN LYS VAL SEQRES 3 A 120 ALA GLY SER LEU CYS ILE ARG MET ASP GLN ALA ILE MET SEQRES 4 A 120 ASP LYS ASN ILE ILE LEU LYS ALA ASN PHE SER VAL ILE SEQRES 5 A 120 PHE ASP ARG LEU GLU THR LEU ILE LEU LEU ARG ALA PHE SEQRES 6 A 120 THR GLU GLU GLY ALA ILE VAL GLY GLU ILE SER PRO LEU SEQRES 7 A 120 PRO SER LEU PRO GLY HIS THR ASP GLU ASP VAL LYS ASN SEQRES 8 A 120 ALA VAL GLY VAL LEU ILE GLY GLY LEU GLU ALA ASN ASP SEQRES 9 A 120 ASN THR VAL ARG VAL SER GLU THR LEU GLN ARG PHE ALA SEQRES 10 A 120 TRP ARG SER SEQRES 1 B 120 ALA SER ARG TYR LEU THR ASP MET THR LEU GLU GLU MET SEQRES 2 B 120 SER ARG ASP TRP PHE MET LEU MET PRO LYS GLN LYS VAL SEQRES 3 B 120 ALA GLY SER LEU CYS ILE ARG MET ASP GLN ALA ILE MET SEQRES 4 B 120 ASP LYS ASN ILE ILE LEU LYS ALA ASN PHE SER VAL ILE SEQRES 5 B 120 PHE ASP ARG LEU GLU THR LEU ILE LEU LEU ARG ALA PHE SEQRES 6 B 120 THR GLU GLU GLY ALA ILE VAL GLY GLU ILE SER PRO LEU SEQRES 7 B 120 PRO SER LEU PRO GLY HIS THR ASP GLU ASP VAL LYS ASN SEQRES 8 B 120 ALA VAL GLY VAL LEU ILE GLY GLY LEU GLU ALA ASN ASP SEQRES 9 B 120 ASN THR VAL ARG VAL SER GLU THR LEU GLN ARG PHE ALA SEQRES 10 B 120 TRP ARG SER FORMUL 3 HOH *208(H2 O) HELIX 1 AA1 THR A 94 ARG A 100 1 7 HELIX 2 AA2 THR A 170 ASN A 188 1 19 HELIX 3 AA3 SER A 195 ARG A 204 1 10 HELIX 4 AA4 THR B 94 ARG B 100 1 7 HELIX 5 AA5 THR B 170 ALA B 187 1 18 HELIX 6 AA6 SER B 195 ARG B 204 1 10 SHEET 1 AA1 6 ARG A 88 THR A 91 0 SHEET 2 AA1 6 ASN A 127 ILE A 137 -1 O PHE A 134 N LEU A 90 SHEET 3 AA1 6 ARG A 140 THR A 151 -1 O ILE A 145 N ASN A 133 SHEET 4 AA1 6 ILE A 156 PRO A 162 -1 O VAL A 157 N ALA A 149 SHEET 5 AA1 6 LEU A 115 ASP A 120 -1 N CYS A 116 O SER A 161 SHEET 6 AA1 6 PRO A 107 ALA A 112 -1 N LYS A 110 O ILE A 117 SHEET 1 AA2 3 ARG A 88 THR A 91 0 SHEET 2 AA2 3 ASN A 127 ILE A 137 -1 O PHE A 134 N LEU A 90 SHEET 3 AA2 3 THR A 191 VAL A 194 1 O THR A 191 N ILE A 128 SHEET 1 AA3 6 ARG B 88 THR B 91 0 SHEET 2 AA3 6 ASN B 127 ILE B 137 -1 O PHE B 134 N LEU B 90 SHEET 3 AA3 6 ARG B 140 THR B 151 -1 O ILE B 145 N ASN B 133 SHEET 4 AA3 6 ILE B 156 PRO B 162 -1 O VAL B 157 N ALA B 149 SHEET 5 AA3 6 LEU B 115 ASP B 120 -1 N CYS B 116 O SER B 161 SHEET 6 AA3 6 PRO B 107 ALA B 112 -1 N LYS B 110 O ILE B 117 SHEET 1 AA4 3 ARG B 88 THR B 91 0 SHEET 2 AA4 3 ASN B 127 ILE B 137 -1 O PHE B 134 N LEU B 90 SHEET 3 AA4 3 THR B 191 VAL B 194 1 O THR B 191 N ILE B 128 CRYST1 32.785 69.744 104.975 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.030502 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014338 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009526 0.00000