data_6DI5 # _entry.id 6DI5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.298 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6DI5 WWPDB D_1000234658 # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 6DI0 unspecified PDB . 6DI3 unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6DI5 _pdbx_database_status.recvd_initial_deposition_date 2018-05-22 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _audit_author.name 'Gardberg, A.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Bioorg. Med. Chem. Lett.' _citation.journal_id_ASTM BMCLE8 _citation.journal_id_CSD 1127 _citation.journal_id_ISSN 1464-3405 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 28 _citation.language ? _citation.page_first 2939 _citation.page_last 2944 _citation.title 'Discovery of potent, highly selective covalent irreversible BTK inhibitors from a fragment hit.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.bmcl.2018.07.008 _citation.pdbx_database_id_PubMed 30122225 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Qiu, H.' 1 ? primary 'Liu-Bujalski, L.' 2 ? primary 'Caldwell, R.D.' 3 ? primary 'Follis, A.V.' 4 ? primary 'Gardberg, A.' 5 ? primary 'Goutopoulos, A.' 6 ? primary 'Grenningloh, R.' 7 ? primary 'Head, J.' 8 ? primary 'Johnson, T.' 9 ? primary 'Jones, R.' 10 ? primary 'Mochalkin, I.' 11 ? primary 'Morandi, F.' 12 ? primary 'Neagu, C.' 13 ? primary 'Sherer, B.' 14 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6DI5 _cell.details ? _cell.formula_units_Z ? _cell.length_a 74.033 _cell.length_a_esd ? _cell.length_b 107.696 _cell.length_b_esd ? _cell.length_c 39.320 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6DI5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Tyrosine-protein kinase BTK' 31598.287 1 2.7.10.2 ? ? ? 2 non-polymer syn '2-(4-phenoxyphenoxy)-6-[(1S,4S)-5-propanoyl-2,5-diazabicyclo[2.2.1]heptan-2-yl]pyridine-3-carboxamide' 458.509 1 ? ? ? ? 3 non-polymer syn 'DIMETHYL SULFOXIDE' 78.133 1 ? ? ? ? 4 water nat water 18.015 307 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Agammaglobulinemia tyrosine kinase,ATK,B-cell progenitor kinase,BPK,Bruton tyrosine kinase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYT IMYSCWHEKADERPTFKILLSNILDVMDEES ; _entity_poly.pdbx_seq_one_letter_code_can ;GLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYT IMYSCWHEKADERPTFKILLSNILDVMDEES ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 LEU n 1 3 GLY n 1 4 TYR n 1 5 GLY n 1 6 SER n 1 7 TRP n 1 8 GLU n 1 9 ILE n 1 10 ASP n 1 11 PRO n 1 12 LYS n 1 13 ASP n 1 14 LEU n 1 15 THR n 1 16 PHE n 1 17 LEU n 1 18 LYS n 1 19 GLU n 1 20 LEU n 1 21 GLY n 1 22 THR n 1 23 GLY n 1 24 GLN n 1 25 PHE n 1 26 GLY n 1 27 VAL n 1 28 VAL n 1 29 LYS n 1 30 TYR n 1 31 GLY n 1 32 LYS n 1 33 TRP n 1 34 ARG n 1 35 GLY n 1 36 GLN n 1 37 TYR n 1 38 ASP n 1 39 VAL n 1 40 ALA n 1 41 ILE n 1 42 LYS n 1 43 MET n 1 44 ILE n 1 45 LYS n 1 46 GLU n 1 47 GLY n 1 48 SER n 1 49 MET n 1 50 SER n 1 51 GLU n 1 52 ASP n 1 53 GLU n 1 54 PHE n 1 55 ILE n 1 56 GLU n 1 57 GLU n 1 58 ALA n 1 59 LYS n 1 60 VAL n 1 61 MET n 1 62 MET n 1 63 ASN n 1 64 LEU n 1 65 SER n 1 66 HIS n 1 67 GLU n 1 68 LYS n 1 69 LEU n 1 70 VAL n 1 71 GLN n 1 72 LEU n 1 73 TYR n 1 74 GLY n 1 75 VAL n 1 76 CYS n 1 77 THR n 1 78 LYS n 1 79 GLN n 1 80 ARG n 1 81 PRO n 1 82 ILE n 1 83 PHE n 1 84 ILE n 1 85 ILE n 1 86 THR n 1 87 GLU n 1 88 TYR n 1 89 MET n 1 90 ALA n 1 91 ASN n 1 92 GLY n 1 93 CYS n 1 94 LEU n 1 95 LEU n 1 96 ASN n 1 97 TYR n 1 98 LEU n 1 99 ARG n 1 100 GLU n 1 101 MET n 1 102 ARG n 1 103 HIS n 1 104 ARG n 1 105 PHE n 1 106 GLN n 1 107 THR n 1 108 GLN n 1 109 GLN n 1 110 LEU n 1 111 LEU n 1 112 GLU n 1 113 MET n 1 114 CYS n 1 115 LYS n 1 116 ASP n 1 117 VAL n 1 118 CYS n 1 119 GLU n 1 120 ALA n 1 121 MET n 1 122 GLU n 1 123 TYR n 1 124 LEU n 1 125 GLU n 1 126 SER n 1 127 LYS n 1 128 GLN n 1 129 PHE n 1 130 LEU n 1 131 HIS n 1 132 ARG n 1 133 ASP n 1 134 LEU n 1 135 ALA n 1 136 ALA n 1 137 ARG n 1 138 ASN n 1 139 CYS n 1 140 LEU n 1 141 VAL n 1 142 ASN n 1 143 ASP n 1 144 GLN n 1 145 GLY n 1 146 VAL n 1 147 VAL n 1 148 LYS n 1 149 VAL n 1 150 SER n 1 151 ASP n 1 152 PHE n 1 153 GLY n 1 154 LEU n 1 155 SER n 1 156 ARG n 1 157 TYR n 1 158 VAL n 1 159 LEU n 1 160 ASP n 1 161 ASP n 1 162 GLU n 1 163 TYR n 1 164 THR n 1 165 SER n 1 166 SER n 1 167 VAL n 1 168 GLY n 1 169 SER n 1 170 LYS n 1 171 PHE n 1 172 PRO n 1 173 VAL n 1 174 ARG n 1 175 TRP n 1 176 SER n 1 177 PRO n 1 178 PRO n 1 179 GLU n 1 180 VAL n 1 181 LEU n 1 182 MET n 1 183 TYR n 1 184 SER n 1 185 LYS n 1 186 PHE n 1 187 SER n 1 188 SER n 1 189 LYS n 1 190 SER n 1 191 ASP n 1 192 ILE n 1 193 TRP n 1 194 ALA n 1 195 PHE n 1 196 GLY n 1 197 VAL n 1 198 LEU n 1 199 MET n 1 200 TRP n 1 201 GLU n 1 202 ILE n 1 203 TYR n 1 204 SER n 1 205 LEU n 1 206 GLY n 1 207 LYS n 1 208 MET n 1 209 PRO n 1 210 TYR n 1 211 GLU n 1 212 ARG n 1 213 PHE n 1 214 THR n 1 215 ASN n 1 216 SER n 1 217 GLU n 1 218 THR n 1 219 ALA n 1 220 GLU n 1 221 HIS n 1 222 ILE n 1 223 ALA n 1 224 GLN n 1 225 GLY n 1 226 LEU n 1 227 ARG n 1 228 LEU n 1 229 TYR n 1 230 ARG n 1 231 PRO n 1 232 HIS n 1 233 LEU n 1 234 ALA n 1 235 SER n 1 236 GLU n 1 237 LYS n 1 238 VAL n 1 239 TYR n 1 240 THR n 1 241 ILE n 1 242 MET n 1 243 TYR n 1 244 SER n 1 245 CYS n 1 246 TRP n 1 247 HIS n 1 248 GLU n 1 249 LYS n 1 250 ALA n 1 251 ASP n 1 252 GLU n 1 253 ARG n 1 254 PRO n 1 255 THR n 1 256 PHE n 1 257 LYS n 1 258 ILE n 1 259 LEU n 1 260 LEU n 1 261 SER n 1 262 ASN n 1 263 ILE n 1 264 LEU n 1 265 ASP n 1 266 VAL n 1 267 MET n 1 268 ASP n 1 269 GLU n 1 270 GLU n 1 271 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 271 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BTK, AGMX1, ATK, BPK' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BTK_HUMAN _struct_ref.pdbx_db_accession Q06187 _struct_ref.pdbx_db_isoform Q06187-2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYT IMYSCWHEKADERPTFKILLSNILDVMDEES ; _struct_ref.pdbx_align_begin 423 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6DI5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 271 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q06187 _struct_ref_seq.db_align_beg 423 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 693 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 389 _struct_ref_seq.pdbx_auth_seq_align_end 659 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DMS non-polymer . 'DIMETHYL SULFOXIDE' ? 'C2 H6 O S' 78.133 GJ7 non-polymer . '2-(4-phenoxyphenoxy)-6-[(1S,4S)-5-propanoyl-2,5-diazabicyclo[2.2.1]heptan-2-yl]pyridine-3-carboxamide' ? 'C26 H26 N4 O4' 458.509 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6DI5 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.48 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 50.41 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;25% PEG 3350, 0.2M AMMONIUM ACETATE, 0.1M HEPES pH 6.9, 3% GLYCEROL PROTEIN SOLUTION : 10 mg/mL IN 20 mM TRIS, 50 mM NaCl, 3 mM DTT, pH 8.0 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-07-30 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.03300 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.03300 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline X10SA _diffrn_source.pdbx_synchrotron_site SLS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6DI5 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.420 _reflns.d_resolution_low 50.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 59227 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.400 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.500 _reflns.pdbx_Rmerge_I_obs 0.044 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 23.900 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.420 _reflns_shell.d_res_low 1.510 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.210 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 95.900 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.570 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 6.480 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 0.8200 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] -0.4000 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -0.4100 _refine.B_iso_max 58.450 _refine.B_iso_mean 12.3640 _refine.B_iso_min 4.990 _refine.correlation_coeff_Fo_to_Fc 0.9590 _refine.correlation_coeff_Fo_to_Fc_free 0.9530 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6DI5 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.4200 _refine.ls_d_res_low 43.5500 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 56265 _refine.ls_number_reflns_R_free 2962 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 100.0000 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1786 _refine.ls_R_factor_R_free 0.1947 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1778 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.0600 _refine.pdbx_overall_ESU_R_Free 0.0600 _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 1.8710 _refine.overall_SU_ML 0.0340 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.4200 _refine_hist.d_res_low 43.5500 _refine_hist.pdbx_number_atoms_ligand 38 _refine_hist.number_atoms_solvent 307 _refine_hist.number_atoms_total 2505 _refine_hist.pdbx_number_residues_total 271 _refine_hist.pdbx_B_iso_mean_ligand 17.24 _refine_hist.pdbx_B_iso_mean_solvent 25.59 _refine_hist.pdbx_number_atoms_protein 2160 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.027 0.022 2289 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 2015 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.781 1.984 3103 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 2.083 3.000 4689 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.168 5.000 282 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 33.351 23.960 101 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 11.961 15.000 404 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 15.290 15.000 12 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.120 0.200 329 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 0.020 2537 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 469 ? r_gen_planes_other ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.4200 _refine_ls_shell.d_res_low 1.4570 _refine_ls_shell.number_reflns_all 4137 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 207 _refine_ls_shell.number_reflns_R_work 3930 _refine_ls_shell.percent_reflns_obs 100.0000 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2970 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.2720 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6DI5 _struct.title 'CRYSTAL STRUCTURE OF BTK IN COMPLEX WITH COVALENT INHIBITOR' _struct.pdbx_descriptor 'Tyrosine-protein kinase BTK (E.C.2.7.10.2)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6DI5 _struct_keywords.text 'LEAD OPTIMIZATION, FRAGMENT SCREENING BY X-RAY, TRANSFERASE, TRANSFERASE-TRANSFERASE INHIBITOR complex' _struct_keywords.pdbx_keywords 'TRANSFERASE/TRANSFERASE INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 10 ? LYS A 12 ? ASP A 398 LYS A 400 5 ? 3 HELX_P HELX_P2 AA2 SER A 50 ? MET A 62 ? SER A 438 MET A 450 1 ? 13 HELX_P HELX_P3 AA3 LEU A 94 ? ARG A 99 ? LEU A 482 ARG A 487 1 ? 6 HELX_P HELX_P4 AA4 GLU A 100 ? ARG A 104 ? GLU A 488 ARG A 492 5 ? 5 HELX_P HELX_P5 AA5 GLN A 106 ? LYS A 127 ? GLN A 494 LYS A 515 1 ? 22 HELX_P HELX_P6 AA6 ALA A 135 ? ARG A 137 ? ALA A 523 ARG A 525 5 ? 3 HELX_P HELX_P7 AA7 GLY A 153 ? VAL A 158 ? GLY A 541 VAL A 546 5 ? 6 HELX_P HELX_P8 AA8 ASP A 160 ? THR A 164 ? ASP A 548 THR A 552 5 ? 5 HELX_P HELX_P9 AA9 PRO A 172 ? SER A 176 ? PRO A 560 SER A 564 5 ? 5 HELX_P HELX_P10 AB1 PRO A 177 ? SER A 184 ? PRO A 565 SER A 572 1 ? 8 HELX_P HELX_P11 AB2 SER A 187 ? SER A 204 ? SER A 575 SER A 592 1 ? 18 HELX_P HELX_P12 AB3 THR A 214 ? GLN A 224 ? THR A 602 GLN A 612 1 ? 11 HELX_P HELX_P13 AB4 SER A 235 ? CYS A 245 ? SER A 623 CYS A 633 1 ? 11 HELX_P HELX_P14 AB5 LYS A 249 ? ARG A 253 ? LYS A 637 ARG A 641 5 ? 5 HELX_P HELX_P15 AB6 THR A 255 ? GLU A 270 ? THR A 643 GLU A 658 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale none ? A CYS 93 SG A ? ? 1_555 B GJ7 . C1 ? ? A CYS 481 A GJ7 701 1_555 ? ? ? ? ? ? ? 1.759 ? covale2 covale none ? A CYS 93 SG B ? ? 1_555 B GJ7 . C1 ? ? A CYS 481 A GJ7 701 1_555 ? ? ? ? ? ? ? 1.808 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ARG _struct_mon_prot_cis.label_seq_id 80 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ARG _struct_mon_prot_cis.auth_seq_id 468 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 81 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 469 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -3.01 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 14 ? THR A 22 ? LEU A 402 THR A 410 AA1 2 GLY A 26 ? TRP A 33 ? GLY A 414 TRP A 421 AA1 3 TYR A 37 ? ILE A 44 ? TYR A 425 ILE A 432 AA1 4 PHE A 83 ? THR A 86 ? PHE A 471 THR A 474 AA1 5 LEU A 72 ? CYS A 76 ? LEU A 460 CYS A 464 AA2 1 GLY A 92 ? CYS A 93 ? GLY A 480 CYS A 481 AA2 2 CYS A 139 ? VAL A 141 ? CYS A 527 VAL A 529 AA2 3 VAL A 147 ? VAL A 149 ? VAL A 535 VAL A 537 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LYS A 18 ? N LYS A 406 O TYR A 30 ? O TYR A 418 AA1 2 3 N VAL A 27 ? N VAL A 415 O MET A 43 ? O MET A 431 AA1 3 4 N LYS A 42 ? N LYS A 430 O ILE A 84 ? O ILE A 472 AA1 4 5 O ILE A 85 ? O ILE A 473 N TYR A 73 ? N TYR A 461 AA2 1 2 N GLY A 92 ? N GLY A 480 O VAL A 141 ? O VAL A 529 AA2 2 3 N LEU A 140 ? N LEU A 528 O LYS A 148 ? O LYS A 536 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GJ7 701 ? 11 'binding site for residue GJ7 A 701' AC2 Software A DMS 702 ? 4 'binding site for residue DMS A 702' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 11 ALA A 40 ? ALA A 428 . ? 1_555 ? 2 AC1 11 LYS A 42 ? LYS A 430 . ? 1_555 ? 3 AC1 11 MET A 61 ? MET A 449 . ? 1_555 ? 4 AC1 11 THR A 86 ? THR A 474 . ? 1_555 ? 5 AC1 11 GLU A 87 ? GLU A 475 . ? 1_555 ? 6 AC1 11 TYR A 88 ? TYR A 476 . ? 1_555 ? 7 AC1 11 MET A 89 ? MET A 477 . ? 1_555 ? 8 AC1 11 CYS A 93 ? CYS A 481 . ? 1_555 ? 9 AC1 11 ARG A 137 ? ARG A 525 . ? 1_555 ? 10 AC1 11 SER A 150 ? SER A 538 . ? 1_555 ? 11 AC1 11 ASP A 151 ? ASP A 539 . ? 1_555 ? 12 AC2 4 THR A 15 ? THR A 403 . ? 1_555 ? 13 AC2 4 PHE A 16 ? PHE A 404 . ? 1_555 ? 14 AC2 4 TYR A 243 ? TYR A 631 . ? 3_445 ? 15 AC2 4 HOH D . ? HOH A 840 . ? 1_555 ? # _atom_sites.entry_id 6DI5 _atom_sites.fract_transf_matrix[1][1] 0.013507 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009285 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025432 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 389 389 GLY GLY A . n A 1 2 LEU 2 390 390 LEU LEU A . n A 1 3 GLY 3 391 391 GLY GLY A . n A 1 4 TYR 4 392 392 TYR TYR A . n A 1 5 GLY 5 393 393 GLY GLY A . n A 1 6 SER 6 394 394 SER SER A . n A 1 7 TRP 7 395 395 TRP TRP A . n A 1 8 GLU 8 396 396 GLU GLU A . n A 1 9 ILE 9 397 397 ILE ILE A . n A 1 10 ASP 10 398 398 ASP ASP A . n A 1 11 PRO 11 399 399 PRO PRO A . n A 1 12 LYS 12 400 400 LYS LYS A . n A 1 13 ASP 13 401 401 ASP ASP A . n A 1 14 LEU 14 402 402 LEU LEU A . n A 1 15 THR 15 403 403 THR THR A . n A 1 16 PHE 16 404 404 PHE PHE A . n A 1 17 LEU 17 405 405 LEU LEU A . n A 1 18 LYS 18 406 406 LYS LYS A . n A 1 19 GLU 19 407 407 GLU GLU A . n A 1 20 LEU 20 408 408 LEU LEU A . n A 1 21 GLY 21 409 409 GLY GLY A . n A 1 22 THR 22 410 410 THR THR A . n A 1 23 GLY 23 411 411 GLY GLY A . n A 1 24 GLN 24 412 412 GLN GLN A . n A 1 25 PHE 25 413 413 PHE PHE A . n A 1 26 GLY 26 414 414 GLY GLY A . n A 1 27 VAL 27 415 415 VAL VAL A . n A 1 28 VAL 28 416 416 VAL VAL A . n A 1 29 LYS 29 417 417 LYS LYS A . n A 1 30 TYR 30 418 418 TYR TYR A . n A 1 31 GLY 31 419 419 GLY GLY A . n A 1 32 LYS 32 420 420 LYS LYS A . n A 1 33 TRP 33 421 421 TRP TRP A . n A 1 34 ARG 34 422 422 ARG ARG A . n A 1 35 GLY 35 423 423 GLY GLY A . n A 1 36 GLN 36 424 424 GLN GLN A . n A 1 37 TYR 37 425 425 TYR TYR A . n A 1 38 ASP 38 426 426 ASP ASP A . n A 1 39 VAL 39 427 427 VAL VAL A . n A 1 40 ALA 40 428 428 ALA ALA A . n A 1 41 ILE 41 429 429 ILE ILE A . n A 1 42 LYS 42 430 430 LYS LYS A . n A 1 43 MET 43 431 431 MET MET A . n A 1 44 ILE 44 432 432 ILE ILE A . n A 1 45 LYS 45 433 433 LYS LYS A . n A 1 46 GLU 46 434 434 GLU GLU A . n A 1 47 GLY 47 435 435 GLY GLY A . n A 1 48 SER 48 436 436 SER SER A . n A 1 49 MET 49 437 437 MET MET A . n A 1 50 SER 50 438 438 SER SER A . n A 1 51 GLU 51 439 439 GLU GLU A . n A 1 52 ASP 52 440 440 ASP ASP A . n A 1 53 GLU 53 441 441 GLU GLU A . n A 1 54 PHE 54 442 442 PHE PHE A . n A 1 55 ILE 55 443 443 ILE ILE A . n A 1 56 GLU 56 444 444 GLU GLU A . n A 1 57 GLU 57 445 445 GLU GLU A . n A 1 58 ALA 58 446 446 ALA ALA A . n A 1 59 LYS 59 447 447 LYS LYS A . n A 1 60 VAL 60 448 448 VAL VAL A . n A 1 61 MET 61 449 449 MET MET A . n A 1 62 MET 62 450 450 MET MET A . n A 1 63 ASN 63 451 451 ASN ASN A . n A 1 64 LEU 64 452 452 LEU LEU A . n A 1 65 SER 65 453 453 SER SER A . n A 1 66 HIS 66 454 454 HIS HIS A . n A 1 67 GLU 67 455 455 GLU GLU A . n A 1 68 LYS 68 456 456 LYS LYS A . n A 1 69 LEU 69 457 457 LEU LEU A . n A 1 70 VAL 70 458 458 VAL VAL A . n A 1 71 GLN 71 459 459 GLN GLN A . n A 1 72 LEU 72 460 460 LEU LEU A . n A 1 73 TYR 73 461 461 TYR TYR A . n A 1 74 GLY 74 462 462 GLY GLY A . n A 1 75 VAL 75 463 463 VAL VAL A . n A 1 76 CYS 76 464 464 CYS CYS A . n A 1 77 THR 77 465 465 THR THR A . n A 1 78 LYS 78 466 466 LYS LYS A . n A 1 79 GLN 79 467 467 GLN GLN A . n A 1 80 ARG 80 468 468 ARG ARG A . n A 1 81 PRO 81 469 469 PRO PRO A . n A 1 82 ILE 82 470 470 ILE ILE A . n A 1 83 PHE 83 471 471 PHE PHE A . n A 1 84 ILE 84 472 472 ILE ILE A . n A 1 85 ILE 85 473 473 ILE ILE A . n A 1 86 THR 86 474 474 THR THR A . n A 1 87 GLU 87 475 475 GLU GLU A . n A 1 88 TYR 88 476 476 TYR TYR A . n A 1 89 MET 89 477 477 MET MET A . n A 1 90 ALA 90 478 478 ALA ALA A . n A 1 91 ASN 91 479 479 ASN ASN A . n A 1 92 GLY 92 480 480 GLY GLY A . n A 1 93 CYS 93 481 481 CYS CYS A . n A 1 94 LEU 94 482 482 LEU LEU A . n A 1 95 LEU 95 483 483 LEU LEU A . n A 1 96 ASN 96 484 484 ASN ASN A . n A 1 97 TYR 97 485 485 TYR TYR A . n A 1 98 LEU 98 486 486 LEU LEU A . n A 1 99 ARG 99 487 487 ARG ARG A . n A 1 100 GLU 100 488 488 GLU GLU A . n A 1 101 MET 101 489 489 MET MET A . n A 1 102 ARG 102 490 490 ARG ARG A . n A 1 103 HIS 103 491 491 HIS HIS A . n A 1 104 ARG 104 492 492 ARG ARG A . n A 1 105 PHE 105 493 493 PHE PHE A . n A 1 106 GLN 106 494 494 GLN GLN A . n A 1 107 THR 107 495 495 THR THR A . n A 1 108 GLN 108 496 496 GLN GLN A . n A 1 109 GLN 109 497 497 GLN GLN A . n A 1 110 LEU 110 498 498 LEU LEU A . n A 1 111 LEU 111 499 499 LEU LEU A . n A 1 112 GLU 112 500 500 GLU GLU A . n A 1 113 MET 113 501 501 MET MET A . n A 1 114 CYS 114 502 502 CYS CYS A . n A 1 115 LYS 115 503 503 LYS LYS A . n A 1 116 ASP 116 504 504 ASP ASP A . n A 1 117 VAL 117 505 505 VAL VAL A . n A 1 118 CYS 118 506 506 CYS CYS A . n A 1 119 GLU 119 507 507 GLU GLU A . n A 1 120 ALA 120 508 508 ALA ALA A . n A 1 121 MET 121 509 509 MET MET A . n A 1 122 GLU 122 510 510 GLU GLU A . n A 1 123 TYR 123 511 511 TYR TYR A . n A 1 124 LEU 124 512 512 LEU LEU A . n A 1 125 GLU 125 513 513 GLU GLU A . n A 1 126 SER 126 514 514 SER SER A . n A 1 127 LYS 127 515 515 LYS LYS A . n A 1 128 GLN 128 516 516 GLN GLN A . n A 1 129 PHE 129 517 517 PHE PHE A . n A 1 130 LEU 130 518 518 LEU LEU A . n A 1 131 HIS 131 519 519 HIS HIS A . n A 1 132 ARG 132 520 520 ARG ARG A . n A 1 133 ASP 133 521 521 ASP ASP A . n A 1 134 LEU 134 522 522 LEU LEU A . n A 1 135 ALA 135 523 523 ALA ALA A . n A 1 136 ALA 136 524 524 ALA ALA A . n A 1 137 ARG 137 525 525 ARG ARG A . n A 1 138 ASN 138 526 526 ASN ASN A . n A 1 139 CYS 139 527 527 CYS CYS A . n A 1 140 LEU 140 528 528 LEU LEU A . n A 1 141 VAL 141 529 529 VAL VAL A . n A 1 142 ASN 142 530 530 ASN ASN A . n A 1 143 ASP 143 531 531 ASP ASP A . n A 1 144 GLN 144 532 532 GLN GLN A . n A 1 145 GLY 145 533 533 GLY GLY A . n A 1 146 VAL 146 534 534 VAL VAL A . n A 1 147 VAL 147 535 535 VAL VAL A . n A 1 148 LYS 148 536 536 LYS LYS A . n A 1 149 VAL 149 537 537 VAL VAL A . n A 1 150 SER 150 538 538 SER SER A . n A 1 151 ASP 151 539 539 ASP ASP A . n A 1 152 PHE 152 540 540 PHE PHE A . n A 1 153 GLY 153 541 541 GLY GLY A . n A 1 154 LEU 154 542 542 LEU LEU A . n A 1 155 SER 155 543 543 SER SER A . n A 1 156 ARG 156 544 544 ARG ARG A . n A 1 157 TYR 157 545 545 TYR TYR A . n A 1 158 VAL 158 546 546 VAL VAL A . n A 1 159 LEU 159 547 547 LEU LEU A . n A 1 160 ASP 160 548 548 ASP ASP A . n A 1 161 ASP 161 549 549 ASP ASP A . n A 1 162 GLU 162 550 550 GLU GLU A . n A 1 163 TYR 163 551 551 TYR TYR A . n A 1 164 THR 164 552 552 THR THR A . n A 1 165 SER 165 553 553 SER SER A . n A 1 166 SER 166 554 554 SER SER A . n A 1 167 VAL 167 555 555 VAL VAL A . n A 1 168 GLY 168 556 556 GLY GLY A . n A 1 169 SER 169 557 557 SER SER A . n A 1 170 LYS 170 558 558 LYS LYS A . n A 1 171 PHE 171 559 559 PHE PHE A . n A 1 172 PRO 172 560 560 PRO PRO A . n A 1 173 VAL 173 561 561 VAL VAL A . n A 1 174 ARG 174 562 562 ARG ARG A . n A 1 175 TRP 175 563 563 TRP TRP A . n A 1 176 SER 176 564 564 SER SER A . n A 1 177 PRO 177 565 565 PRO PRO A . n A 1 178 PRO 178 566 566 PRO PRO A . n A 1 179 GLU 179 567 567 GLU GLU A . n A 1 180 VAL 180 568 568 VAL VAL A . n A 1 181 LEU 181 569 569 LEU LEU A . n A 1 182 MET 182 570 570 MET MET A . n A 1 183 TYR 183 571 571 TYR TYR A . n A 1 184 SER 184 572 572 SER SER A . n A 1 185 LYS 185 573 573 LYS LYS A . n A 1 186 PHE 186 574 574 PHE PHE A . n A 1 187 SER 187 575 575 SER SER A . n A 1 188 SER 188 576 576 SER SER A . n A 1 189 LYS 189 577 577 LYS LYS A . n A 1 190 SER 190 578 578 SER SER A . n A 1 191 ASP 191 579 579 ASP ASP A . n A 1 192 ILE 192 580 580 ILE ILE A . n A 1 193 TRP 193 581 581 TRP TRP A . n A 1 194 ALA 194 582 582 ALA ALA A . n A 1 195 PHE 195 583 583 PHE PHE A . n A 1 196 GLY 196 584 584 GLY GLY A . n A 1 197 VAL 197 585 585 VAL VAL A . n A 1 198 LEU 198 586 586 LEU LEU A . n A 1 199 MET 199 587 587 MET MET A . n A 1 200 TRP 200 588 588 TRP TRP A . n A 1 201 GLU 201 589 589 GLU GLU A . n A 1 202 ILE 202 590 590 ILE ILE A . n A 1 203 TYR 203 591 591 TYR TYR A . n A 1 204 SER 204 592 592 SER SER A . n A 1 205 LEU 205 593 593 LEU LEU A . n A 1 206 GLY 206 594 594 GLY GLY A . n A 1 207 LYS 207 595 595 LYS LYS A . n A 1 208 MET 208 596 596 MET MET A . n A 1 209 PRO 209 597 597 PRO PRO A . n A 1 210 TYR 210 598 598 TYR TYR A . n A 1 211 GLU 211 599 599 GLU GLU A . n A 1 212 ARG 212 600 600 ARG ARG A . n A 1 213 PHE 213 601 601 PHE PHE A . n A 1 214 THR 214 602 602 THR THR A . n A 1 215 ASN 215 603 603 ASN ASN A . n A 1 216 SER 216 604 604 SER SER A . n A 1 217 GLU 217 605 605 GLU GLU A . n A 1 218 THR 218 606 606 THR THR A . n A 1 219 ALA 219 607 607 ALA ALA A . n A 1 220 GLU 220 608 608 GLU GLU A . n A 1 221 HIS 221 609 609 HIS HIS A . n A 1 222 ILE 222 610 610 ILE ILE A . n A 1 223 ALA 223 611 611 ALA ALA A . n A 1 224 GLN 224 612 612 GLN GLN A . n A 1 225 GLY 225 613 613 GLY GLY A . n A 1 226 LEU 226 614 614 LEU LEU A . n A 1 227 ARG 227 615 615 ARG ARG A . n A 1 228 LEU 228 616 616 LEU LEU A . n A 1 229 TYR 229 617 617 TYR TYR A . n A 1 230 ARG 230 618 618 ARG ARG A . n A 1 231 PRO 231 619 619 PRO PRO A . n A 1 232 HIS 232 620 620 HIS HIS A . n A 1 233 LEU 233 621 621 LEU LEU A . n A 1 234 ALA 234 622 622 ALA ALA A . n A 1 235 SER 235 623 623 SER SER A . n A 1 236 GLU 236 624 624 GLU GLU A . n A 1 237 LYS 237 625 625 LYS LYS A . n A 1 238 VAL 238 626 626 VAL VAL A . n A 1 239 TYR 239 627 627 TYR TYR A . n A 1 240 THR 240 628 628 THR THR A . n A 1 241 ILE 241 629 629 ILE ILE A . n A 1 242 MET 242 630 630 MET MET A . n A 1 243 TYR 243 631 631 TYR TYR A . n A 1 244 SER 244 632 632 SER SER A . n A 1 245 CYS 245 633 633 CYS CYS A . n A 1 246 TRP 246 634 634 TRP TRP A . n A 1 247 HIS 247 635 635 HIS HIS A . n A 1 248 GLU 248 636 636 GLU GLU A . n A 1 249 LYS 249 637 637 LYS LYS A . n A 1 250 ALA 250 638 638 ALA ALA A . n A 1 251 ASP 251 639 639 ASP ASP A . n A 1 252 GLU 252 640 640 GLU GLU A . n A 1 253 ARG 253 641 641 ARG ARG A . n A 1 254 PRO 254 642 642 PRO PRO A . n A 1 255 THR 255 643 643 THR THR A . n A 1 256 PHE 256 644 644 PHE PHE A . n A 1 257 LYS 257 645 645 LYS LYS A . n A 1 258 ILE 258 646 646 ILE ILE A . n A 1 259 LEU 259 647 647 LEU LEU A . n A 1 260 LEU 260 648 648 LEU LEU A . n A 1 261 SER 261 649 649 SER SER A . n A 1 262 ASN 262 650 650 ASN ASN A . n A 1 263 ILE 263 651 651 ILE ILE A . n A 1 264 LEU 264 652 652 LEU LEU A . n A 1 265 ASP 265 653 653 ASP ASP A . n A 1 266 VAL 266 654 654 VAL VAL A . n A 1 267 MET 267 655 655 MET MET A . n A 1 268 ASP 268 656 656 ASP ASP A . n A 1 269 GLU 269 657 657 GLU GLU A . n A 1 270 GLU 270 658 658 GLU GLU A . n A 1 271 SER 271 659 659 SER SER A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GJ7 1 701 0 GJ7 INH A . C 3 DMS 1 702 1 DMS DMS A . D 4 HOH 1 801 197 HOH HOH A . D 4 HOH 2 802 250 HOH HOH A . D 4 HOH 3 803 303 HOH HOH A . D 4 HOH 4 804 312 HOH HOH A . D 4 HOH 5 805 230 HOH HOH A . D 4 HOH 6 806 117 HOH HOH A . D 4 HOH 7 807 261 HOH HOH A . D 4 HOH 8 808 248 HOH HOH A . D 4 HOH 9 809 252 HOH HOH A . D 4 HOH 10 810 300 HOH HOH A . D 4 HOH 11 811 92 HOH HOH A . D 4 HOH 12 812 243 HOH HOH A . D 4 HOH 13 813 160 HOH HOH A . D 4 HOH 14 814 142 HOH HOH A . D 4 HOH 15 815 276 HOH HOH A . D 4 HOH 16 816 156 HOH HOH A . D 4 HOH 17 817 103 HOH HOH A . D 4 HOH 18 818 80 HOH HOH A . D 4 HOH 19 819 264 HOH HOH A . D 4 HOH 20 820 157 HOH HOH A . D 4 HOH 21 821 54 HOH HOH A . D 4 HOH 22 822 53 HOH HOH A . D 4 HOH 23 823 15 HOH HOH A . D 4 HOH 24 824 1 HOH HOH A . D 4 HOH 25 825 240 HOH HOH A . D 4 HOH 26 826 122 HOH HOH A . D 4 HOH 27 827 307 HOH HOH A . D 4 HOH 28 828 10 HOH HOH A . D 4 HOH 29 829 20 HOH HOH A . D 4 HOH 30 830 58 HOH HOH A . D 4 HOH 31 831 266 HOH HOH A . D 4 HOH 32 832 158 HOH HOH A . D 4 HOH 33 833 163 HOH HOH A . D 4 HOH 34 834 104 HOH HOH A . D 4 HOH 35 835 241 HOH HOH A . D 4 HOH 36 836 194 HOH HOH A . D 4 HOH 37 837 245 HOH HOH A . D 4 HOH 38 838 73 HOH HOH A . D 4 HOH 39 839 159 HOH HOH A . D 4 HOH 40 840 299 HOH HOH A . D 4 HOH 41 841 16 HOH HOH A . D 4 HOH 42 842 62 HOH HOH A . D 4 HOH 43 843 12 HOH HOH A . D 4 HOH 44 844 151 HOH HOH A . D 4 HOH 45 845 47 HOH HOH A . D 4 HOH 46 846 202 HOH HOH A . D 4 HOH 47 847 90 HOH HOH A . D 4 HOH 48 848 175 HOH HOH A . D 4 HOH 49 849 123 HOH HOH A . D 4 HOH 50 850 6 HOH HOH A . D 4 HOH 51 851 254 HOH HOH A . D 4 HOH 52 852 35 HOH HOH A . D 4 HOH 53 853 5 HOH HOH A . D 4 HOH 54 854 196 HOH HOH A . D 4 HOH 55 855 24 HOH HOH A . D 4 HOH 56 856 186 HOH HOH A . D 4 HOH 57 857 21 HOH HOH A . D 4 HOH 58 858 14 HOH HOH A . D 4 HOH 59 859 302 HOH HOH A . D 4 HOH 60 860 102 HOH HOH A . D 4 HOH 61 861 13 HOH HOH A . D 4 HOH 62 862 131 HOH HOH A . D 4 HOH 63 863 169 HOH HOH A . D 4 HOH 64 864 57 HOH HOH A . D 4 HOH 65 865 19 HOH HOH A . D 4 HOH 66 866 77 HOH HOH A . D 4 HOH 67 867 221 HOH HOH A . D 4 HOH 68 868 29 HOH HOH A . D 4 HOH 69 869 155 HOH HOH A . D 4 HOH 70 870 161 HOH HOH A . D 4 HOH 71 871 271 HOH HOH A . D 4 HOH 72 872 60 HOH HOH A . D 4 HOH 73 873 136 HOH HOH A . D 4 HOH 74 874 229 HOH HOH A . D 4 HOH 75 875 114 HOH HOH A . D 4 HOH 76 876 30 HOH HOH A . D 4 HOH 77 877 107 HOH HOH A . D 4 HOH 78 878 233 HOH HOH A . D 4 HOH 79 879 190 HOH HOH A . D 4 HOH 80 880 185 HOH HOH A . D 4 HOH 81 881 76 HOH HOH A . D 4 HOH 82 882 140 HOH HOH A . D 4 HOH 83 883 43 HOH HOH A . D 4 HOH 84 884 72 HOH HOH A . D 4 HOH 85 885 304 HOH HOH A . D 4 HOH 86 886 69 HOH HOH A . D 4 HOH 87 887 66 HOH HOH A . D 4 HOH 88 888 273 HOH HOH A . D 4 HOH 89 889 99 HOH HOH A . D 4 HOH 90 890 182 HOH HOH A . D 4 HOH 91 891 110 HOH HOH A . D 4 HOH 92 892 82 HOH HOH A . D 4 HOH 93 893 65 HOH HOH A . D 4 HOH 94 894 55 HOH HOH A . D 4 HOH 95 895 118 HOH HOH A . D 4 HOH 96 896 179 HOH HOH A . D 4 HOH 97 897 257 HOH HOH A . D 4 HOH 98 898 39 HOH HOH A . D 4 HOH 99 899 41 HOH HOH A . D 4 HOH 100 900 45 HOH HOH A . D 4 HOH 101 901 128 HOH HOH A . D 4 HOH 102 902 256 HOH HOH A . D 4 HOH 103 903 246 HOH HOH A . D 4 HOH 104 904 238 HOH HOH A . D 4 HOH 105 905 2 HOH HOH A . D 4 HOH 106 906 137 HOH HOH A . D 4 HOH 107 907 222 HOH HOH A . D 4 HOH 108 908 262 HOH HOH A . D 4 HOH 109 909 74 HOH HOH A . D 4 HOH 110 910 187 HOH HOH A . D 4 HOH 111 911 86 HOH HOH A . D 4 HOH 112 912 232 HOH HOH A . D 4 HOH 113 913 95 HOH HOH A . D 4 HOH 114 914 121 HOH HOH A . D 4 HOH 115 915 94 HOH HOH A . D 4 HOH 116 916 305 HOH HOH A . D 4 HOH 117 917 113 HOH HOH A . D 4 HOH 118 918 27 HOH HOH A . D 4 HOH 119 919 126 HOH HOH A . D 4 HOH 120 920 227 HOH HOH A . D 4 HOH 121 921 275 HOH HOH A . D 4 HOH 122 922 115 HOH HOH A . D 4 HOH 123 923 31 HOH HOH A . D 4 HOH 124 924 85 HOH HOH A . D 4 HOH 125 925 11 HOH HOH A . D 4 HOH 126 926 89 HOH HOH A . D 4 HOH 127 927 129 HOH HOH A . D 4 HOH 128 928 170 HOH HOH A . D 4 HOH 129 929 48 HOH HOH A . D 4 HOH 130 930 56 HOH HOH A . D 4 HOH 131 931 277 HOH HOH A . D 4 HOH 132 932 49 HOH HOH A . D 4 HOH 133 933 242 HOH HOH A . D 4 HOH 134 934 18 HOH HOH A . D 4 HOH 135 935 34 HOH HOH A . D 4 HOH 136 936 8 HOH HOH A . D 4 HOH 137 937 310 HOH HOH A . D 4 HOH 138 938 32 HOH HOH A . D 4 HOH 139 939 134 HOH HOH A . D 4 HOH 140 940 145 HOH HOH A . D 4 HOH 141 941 224 HOH HOH A . D 4 HOH 142 942 174 HOH HOH A . D 4 HOH 143 943 135 HOH HOH A . D 4 HOH 144 944 64 HOH HOH A . D 4 HOH 145 945 119 HOH HOH A . D 4 HOH 146 946 9 HOH HOH A . D 4 HOH 147 947 207 HOH HOH A . D 4 HOH 148 948 63 HOH HOH A . D 4 HOH 149 949 7 HOH HOH A . D 4 HOH 150 950 59 HOH HOH A . D 4 HOH 151 951 42 HOH HOH A . D 4 HOH 152 952 25 HOH HOH A . D 4 HOH 153 953 108 HOH HOH A . D 4 HOH 154 954 75 HOH HOH A . D 4 HOH 155 955 181 HOH HOH A . D 4 HOH 156 956 17 HOH HOH A . D 4 HOH 157 957 26 HOH HOH A . D 4 HOH 158 958 87 HOH HOH A . D 4 HOH 159 959 71 HOH HOH A . D 4 HOH 160 960 36 HOH HOH A . D 4 HOH 161 961 150 HOH HOH A . D 4 HOH 162 962 267 HOH HOH A . D 4 HOH 163 963 127 HOH HOH A . D 4 HOH 164 964 3 HOH HOH A . D 4 HOH 165 965 96 HOH HOH A . D 4 HOH 166 966 283 HOH HOH A . D 4 HOH 167 967 268 HOH HOH A . D 4 HOH 168 968 68 HOH HOH A . D 4 HOH 169 969 177 HOH HOH A . D 4 HOH 170 970 153 HOH HOH A . D 4 HOH 171 971 214 HOH HOH A . D 4 HOH 172 972 309 HOH HOH A . D 4 HOH 173 973 4 HOH HOH A . D 4 HOH 174 974 206 HOH HOH A . D 4 HOH 175 975 50 HOH HOH A . D 4 HOH 176 976 46 HOH HOH A . D 4 HOH 177 977 98 HOH HOH A . D 4 HOH 178 978 83 HOH HOH A . D 4 HOH 179 979 23 HOH HOH A . D 4 HOH 180 980 231 HOH HOH A . D 4 HOH 181 981 61 HOH HOH A . D 4 HOH 182 982 93 HOH HOH A . D 4 HOH 183 983 84 HOH HOH A . D 4 HOH 184 984 147 HOH HOH A . D 4 HOH 185 985 301 HOH HOH A . D 4 HOH 186 986 22 HOH HOH A . D 4 HOH 187 987 306 HOH HOH A . D 4 HOH 188 988 223 HOH HOH A . D 4 HOH 189 989 173 HOH HOH A . D 4 HOH 190 990 208 HOH HOH A . D 4 HOH 191 991 38 HOH HOH A . D 4 HOH 192 992 52 HOH HOH A . D 4 HOH 193 993 234 HOH HOH A . D 4 HOH 194 994 81 HOH HOH A . D 4 HOH 195 995 165 HOH HOH A . D 4 HOH 196 996 106 HOH HOH A . D 4 HOH 197 997 51 HOH HOH A . D 4 HOH 198 998 70 HOH HOH A . D 4 HOH 199 999 40 HOH HOH A . D 4 HOH 200 1000 79 HOH HOH A . D 4 HOH 201 1001 216 HOH HOH A . D 4 HOH 202 1002 255 HOH HOH A . D 4 HOH 203 1003 88 HOH HOH A . D 4 HOH 204 1004 78 HOH HOH A . D 4 HOH 205 1005 311 HOH HOH A . D 4 HOH 206 1006 167 HOH HOH A . D 4 HOH 207 1007 178 HOH HOH A . D 4 HOH 208 1008 225 HOH HOH A . D 4 HOH 209 1009 297 HOH HOH A . D 4 HOH 210 1010 235 HOH HOH A . D 4 HOH 211 1011 28 HOH HOH A . D 4 HOH 212 1012 272 HOH HOH A . D 4 HOH 213 1013 265 HOH HOH A . D 4 HOH 214 1014 67 HOH HOH A . D 4 HOH 215 1015 212 HOH HOH A . D 4 HOH 216 1016 198 HOH HOH A . D 4 HOH 217 1017 236 HOH HOH A . D 4 HOH 218 1018 219 HOH HOH A . D 4 HOH 219 1019 285 HOH HOH A . D 4 HOH 220 1020 200 HOH HOH A . D 4 HOH 221 1021 228 HOH HOH A . D 4 HOH 222 1022 33 HOH HOH A . D 4 HOH 223 1023 120 HOH HOH A . D 4 HOH 224 1024 278 HOH HOH A . D 4 HOH 225 1025 215 HOH HOH A . D 4 HOH 226 1026 189 HOH HOH A . D 4 HOH 227 1027 204 HOH HOH A . D 4 HOH 228 1028 298 HOH HOH A . D 4 HOH 229 1029 258 HOH HOH A . D 4 HOH 230 1030 270 HOH HOH A . D 4 HOH 231 1031 144 HOH HOH A . D 4 HOH 232 1032 281 HOH HOH A . D 4 HOH 233 1033 269 HOH HOH A . D 4 HOH 234 1034 211 HOH HOH A . D 4 HOH 235 1035 148 HOH HOH A . D 4 HOH 236 1036 286 HOH HOH A . D 4 HOH 237 1037 205 HOH HOH A . D 4 HOH 238 1038 124 HOH HOH A . D 4 HOH 239 1039 109 HOH HOH A . D 4 HOH 240 1040 217 HOH HOH A . D 4 HOH 241 1041 220 HOH HOH A . D 4 HOH 242 1042 172 HOH HOH A . D 4 HOH 243 1043 237 HOH HOH A . D 4 HOH 244 1044 287 HOH HOH A . D 4 HOH 245 1045 188 HOH HOH A . D 4 HOH 246 1046 289 HOH HOH A . D 4 HOH 247 1047 44 HOH HOH A . D 4 HOH 248 1048 154 HOH HOH A . D 4 HOH 249 1049 249 HOH HOH A . D 4 HOH 250 1050 253 HOH HOH A . D 4 HOH 251 1051 101 HOH HOH A . D 4 HOH 252 1052 191 HOH HOH A . D 4 HOH 253 1053 146 HOH HOH A . D 4 HOH 254 1054 111 HOH HOH A . D 4 HOH 255 1055 218 HOH HOH A . D 4 HOH 256 1056 290 HOH HOH A . D 4 HOH 257 1057 141 HOH HOH A . D 4 HOH 258 1058 139 HOH HOH A . D 4 HOH 259 1059 112 HOH HOH A . D 4 HOH 260 1060 105 HOH HOH A . D 4 HOH 261 1061 274 HOH HOH A . D 4 HOH 262 1062 152 HOH HOH A . D 4 HOH 263 1063 183 HOH HOH A . D 4 HOH 264 1064 125 HOH HOH A . D 4 HOH 265 1065 176 HOH HOH A . D 4 HOH 266 1066 279 HOH HOH A . D 4 HOH 267 1067 296 HOH HOH A . D 4 HOH 268 1068 166 HOH HOH A . D 4 HOH 269 1069 171 HOH HOH A . D 4 HOH 270 1070 100 HOH HOH A . D 4 HOH 271 1071 244 HOH HOH A . D 4 HOH 272 1072 130 HOH HOH A . D 4 HOH 273 1073 251 HOH HOH A . D 4 HOH 274 1074 291 HOH HOH A . D 4 HOH 275 1075 193 HOH HOH A . D 4 HOH 276 1076 195 HOH HOH A . D 4 HOH 277 1077 162 HOH HOH A . D 4 HOH 278 1078 180 HOH HOH A . D 4 HOH 279 1079 203 HOH HOH A . D 4 HOH 280 1080 282 HOH HOH A . D 4 HOH 281 1081 138 HOH HOH A . D 4 HOH 282 1082 295 HOH HOH A . D 4 HOH 283 1083 226 HOH HOH A . D 4 HOH 284 1084 184 HOH HOH A . D 4 HOH 285 1085 91 HOH HOH A . D 4 HOH 286 1086 292 HOH HOH A . D 4 HOH 287 1087 97 HOH HOH A . D 4 HOH 288 1088 116 HOH HOH A . D 4 HOH 289 1089 209 HOH HOH A . D 4 HOH 290 1090 149 HOH HOH A . D 4 HOH 291 1091 199 HOH HOH A . D 4 HOH 292 1092 201 HOH HOH A . D 4 HOH 293 1093 210 HOH HOH A . D 4 HOH 294 1094 132 HOH HOH A . D 4 HOH 295 1095 247 HOH HOH A . D 4 HOH 296 1096 259 HOH HOH A . D 4 HOH 297 1097 133 HOH HOH A . D 4 HOH 298 1098 143 HOH HOH A . D 4 HOH 299 1099 213 HOH HOH A . D 4 HOH 300 1100 263 HOH HOH A . D 4 HOH 301 1101 260 HOH HOH A . D 4 HOH 302 1102 308 HOH HOH A . D 4 HOH 303 1103 284 HOH HOH A . D 4 HOH 304 1104 288 HOH HOH A . D 4 HOH 305 1105 164 HOH HOH A . D 4 HOH 306 1106 37 HOH HOH A . D 4 HOH 307 1107 168 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2018-09-05 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.5.0066 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.24 3 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OE2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLU _pdbx_validate_close_contact.auth_seq_id_1 599 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 B _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 801 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.13 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 468 ? ? -22.89 133.55 2 1 ARG A 520 ? ? 78.09 -12.96 3 1 ASP A 521 ? ? -150.98 52.75 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 1107 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.39 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A THR 410 ? OG1 ? A THR 22 OG1 2 1 Y 1 A THR 410 ? CG2 ? A THR 22 CG2 3 1 Y 1 A GLN 412 ? CG ? A GLN 24 CG 4 1 Y 1 A GLN 412 ? CD ? A GLN 24 CD 5 1 Y 1 A GLN 412 ? OE1 ? A GLN 24 OE1 6 1 Y 1 A GLN 412 ? NE2 ? A GLN 24 NE2 7 1 Y 1 A PHE 413 ? CG ? A PHE 25 CG 8 1 Y 1 A PHE 413 ? CD1 ? A PHE 25 CD1 9 1 Y 1 A PHE 413 ? CD2 ? A PHE 25 CD2 10 1 Y 1 A PHE 413 ? CE1 ? A PHE 25 CE1 11 1 Y 1 A PHE 413 ? CE2 ? A PHE 25 CE2 12 1 Y 1 A PHE 413 ? CZ ? A PHE 25 CZ 13 1 Y 1 A GLU 434 ? CG ? A GLU 46 CG 14 1 Y 1 A GLU 434 ? CD ? A GLU 46 CD 15 1 Y 1 A GLU 434 ? OE1 ? A GLU 46 OE1 16 1 Y 1 A GLU 434 ? OE2 ? A GLU 46 OE2 17 1 Y 1 A LYS 466 ? CG ? A LYS 78 CG 18 1 Y 1 A LYS 466 ? CD ? A LYS 78 CD 19 1 Y 1 A LYS 466 ? CE ? A LYS 78 CE 20 1 Y 1 A LYS 466 ? NZ ? A LYS 78 NZ 21 1 Y 1 A GLN 467 ? CG ? A GLN 79 CG 22 1 Y 1 A GLN 467 ? CD ? A GLN 79 CD 23 1 Y 1 A GLN 467 ? OE1 ? A GLN 79 OE1 24 1 Y 1 A GLN 467 ? NE2 ? A GLN 79 NE2 25 1 Y 1 A ARG 468 ? CG ? A ARG 80 CG 26 1 Y 1 A ARG 468 ? CD ? A ARG 80 CD 27 1 Y 1 A ARG 468 ? NE ? A ARG 80 NE 28 1 Y 1 A ARG 468 ? CZ ? A ARG 80 CZ 29 1 Y 1 A ARG 468 ? NH1 ? A ARG 80 NH1 30 1 Y 1 A ARG 468 ? NH2 ? A ARG 80 NH2 31 1 Y 1 A GLN 496 ? CG ? A GLN 108 CG 32 1 Y 1 A GLN 496 ? CD ? A GLN 108 CD 33 1 Y 1 A GLN 496 ? OE1 ? A GLN 108 OE1 34 1 Y 1 A GLN 496 ? NE2 ? A GLN 108 NE2 35 1 Y 1 A TYR 551 ? CG ? A TYR 163 CG 36 1 Y 1 A TYR 551 ? CD1 ? A TYR 163 CD1 37 1 Y 1 A TYR 551 ? CD2 ? A TYR 163 CD2 38 1 Y 1 A TYR 551 ? CE1 ? A TYR 163 CE1 39 1 Y 1 A TYR 551 ? CE2 ? A TYR 163 CE2 40 1 Y 1 A TYR 551 ? CZ ? A TYR 163 CZ 41 1 Y 1 A TYR 551 ? OH ? A TYR 163 OH 42 1 Y 1 A VAL 555 ? CG1 ? A VAL 167 CG1 43 1 Y 1 A VAL 555 ? CG2 ? A VAL 167 CG2 44 1 Y 1 A LYS 558 ? CG ? A LYS 170 CG 45 1 Y 1 A LYS 558 ? CD ? A LYS 170 CD 46 1 Y 1 A LYS 558 ? CE ? A LYS 170 CE 47 1 Y 1 A LYS 558 ? NZ ? A LYS 170 NZ 48 1 Y 1 A GLU 608 ? CG ? A GLU 220 CG 49 1 Y 1 A GLU 608 ? CD ? A GLU 220 CD 50 1 Y 1 A GLU 608 ? OE1 ? A GLU 220 OE1 51 1 Y 1 A GLU 608 ? OE2 ? A GLU 220 OE2 52 1 Y 1 A GLU 657 ? CG ? A GLU 269 CG 53 1 Y 1 A GLU 657 ? CD ? A GLU 269 CD 54 1 Y 1 A GLU 657 ? OE1 ? A GLU 269 OE1 55 1 Y 1 A GLU 657 ? OE2 ? A GLU 269 OE2 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id GJ7 _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id GJ7 _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '2-(4-phenoxyphenoxy)-6-[(1S,4S)-5-propanoyl-2,5-diazabicyclo[2.2.1]heptan-2-yl]pyridine-3-carboxamide' GJ7 3 'DIMETHYL SULFOXIDE' DMS 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #