HEADER HYDROLASE/HYDROLASE INHIBITOR 23-MAY-18 6DIU TITLE CRYSTAL STRUCTURE OF HCV NS3/4A PROTEASE IN COMPLEX WITH P4-3(AJ-74) COMPND MOL_ID: 1; COMPND 2 MOLECULE: NS3 PROTEASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HEPACIVIRUS C; SOURCE 3 ORGANISM_TAXID: 11103; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS NS3/4A PROTEASE, HEPATITIS C VIRUS, DRUG RESISTANCE, PROTEASE KEYWDS 2 INHIBITOR, HYDROLASE-HYDROLASE INHIBITOR COMPLEX, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.N.MATTHEW,C.A.SCHIFFER REVDAT 3 11-OCT-23 6DIU 1 REMARK REVDAT 2 18-DEC-19 6DIU 1 REMARK REVDAT 1 31-JUL-19 6DIU 0 JRNL AUTH A.N.MATTHEW,C.A.SCHIFFER JRNL TITL DESIGN OF HEPATITIS C NS3/4A PROTEASE INHIBITORS LEVERAGING JRNL TITL 2 UNTAPPED REGIONS OF THE SUBSTRATE ENVELOPE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.87 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12-2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.87 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.56 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 16083 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 814 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.5641 - 3.3929 1.00 2736 151 0.1691 0.2484 REMARK 3 2 3.3929 - 2.6939 0.99 2612 138 0.1841 0.2195 REMARK 3 3 2.6939 - 2.3536 0.99 2558 138 0.2011 0.2341 REMARK 3 4 2.3536 - 2.1385 0.98 2520 136 0.1856 0.2099 REMARK 3 5 2.1385 - 1.9853 0.97 2522 119 0.1849 0.2464 REMARK 3 6 1.9853 - 1.8683 0.91 2321 132 0.1901 0.2371 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.020 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 1689 REMARK 3 ANGLE : 0.636 2315 REMARK 3 CHIRALITY : 0.045 257 REMARK 3 PLANARITY : 0.003 295 REMARK 3 DIHEDRAL : 13.517 991 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6DIU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-MAY-18. REMARK 100 THE DEPOSITION ID IS D_1000234622. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-OCT-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-3000 703X REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16126 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.868 REMARK 200 RESOLUTION RANGE LOW (A) : 26.561 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.87 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.99 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5VOJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES BUFFER PH 6.5, 4% (W/V) REMARK 280 AMMONIUM SULFATE, 20-26% PEG 3350, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.54250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 29.23100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.81650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 29.23100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.54250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.81650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A1013 CG CD OE1 OE2 REMARK 470 GLU A1014 CG CD OE1 OE2 REMARK 470 LYS A1026 CE NZ REMARK 470 ARG A1092 CG CD NE CZ NH1 NH2 REMARK 470 ARG A1161 CG CD NE CZ NH1 NH2 REMARK 470 LYS A1165 NZ REMARK 470 ARG A1180 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HO3 GOL A 1209 O HOH A 1306 1.54 REMARK 500 O HOH A 1432 O HOH A 1478 1.90 REMARK 500 O HOH A 1491 O HOH A 1495 2.01 REMARK 500 O HOH A 1322 O HOH A 1343 2.06 REMARK 500 O1 SO4 A 1205 O HOH A 1303 2.07 REMARK 500 O HOH A 1388 O HOH A 1503 2.07 REMARK 500 O HOH A 1475 O HOH A 1500 2.08 REMARK 500 O HOH A 1384 O HOH A 1458 2.08 REMARK 500 O HOH A 1351 O HOH A 1485 2.08 REMARK 500 O HOH A 1442 O HOH A 1492 2.09 REMARK 500 O HOH A 1491 O HOH A 1509 2.13 REMARK 500 O HOH A 1426 O HOH A 1465 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1328 O HOH A 1366 2454 1.98 REMARK 500 O HOH A 1326 O HOH A 1481 4445 2.04 REMARK 500 O HOH A 1484 O HOH A 1500 2455 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A1038 -168.26 -107.60 REMARK 500 PHE A1043 -160.54 -161.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1097 SG REMARK 620 2 CYS A1099 SG 108.0 REMARK 620 3 CYS A1145 SG 110.5 118.6 REMARK 620 4 HIS A1149 ND1 124.8 95.6 99.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GKM A 1206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 1207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 1208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 1209 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 1210 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 1211 DBREF1 6DIU A 1004 1180 UNP A0A0B4WYC6_9HEPC DBREF2 6DIU A A0A0B4WYC6 4 180 SEQADV 6DIU HIS A 982 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6DIU MET A 983 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6DIU ALA A 984 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6DIU SER A 985 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6DIU MET A 986 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6DIU LYS A 987 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6DIU LYS A 988 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6DIU LYS A 989 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6DIU GLY A 990 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6DIU SER A 991 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6DIU VAL A 992 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6DIU VAL A 993 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6DIU ILE A 994 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6DIU VAL A 995 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6DIU GLY A 996 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6DIU ARG A 997 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6DIU ILE A 998 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6DIU ASN A 999 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6DIU LEU A 1000 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6DIU SER A 1001 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6DIU GLY A 1002 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6DIU ASP A 1003 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6DIU GLU A 1013 UNP A0A0B4WYC LEU 13 CONFLICT SEQADV 6DIU GLU A 1014 UNP A0A0B4WYC LEU 14 CONFLICT SEQADV 6DIU GLN A 1017 UNP A0A0B4WYC ILE 17 CONFLICT SEQADV 6DIU GLU A 1018 UNP A0A0B4WYC ILE 18 CONFLICT SEQADV 6DIU GLN A 1021 UNP A0A0B4WYC LEU 21 CONFLICT SEQADV 6DIU SER A 1047 UNP A0A0B4WYC CYS 47 CONFLICT SEQADV 6DIU LEU A 1052 UNP A0A0B4WYC CYS 52 CONFLICT SEQADV 6DIU THR A 1072 UNP A0A0B4WYC ILE 72 CONFLICT SEQADV 6DIU GLN A 1086 UNP A0A0B4WYC PRO 86 CONFLICT SEQADV 6DIU SER A 1159 UNP A0A0B4WYC CYS 159 CONFLICT SEQRES 1 A 199 HIS MET ALA SER MET LYS LYS LYS GLY SER VAL VAL ILE SEQRES 2 A 199 VAL GLY ARG ILE ASN LEU SER GLY ASP THR ALA TYR ALA SEQRES 3 A 199 GLN GLN THR ARG GLY GLU GLU GLY CYS GLN GLU THR SER SEQRES 4 A 199 GLN THR GLY ARG ASP LYS ASN GLN VAL GLU GLY GLU VAL SEQRES 5 A 199 GLN ILE VAL SER THR ALA THR GLN THR PHE LEU ALA THR SEQRES 6 A 199 SER ILE ASN GLY VAL LEU TRP THR VAL TYR HIS GLY ALA SEQRES 7 A 199 GLY THR ARG THR ILE ALA SER PRO LYS GLY PRO VAL THR SEQRES 8 A 199 GLN MET TYR THR ASN VAL ASP LYS ASP LEU VAL GLY TRP SEQRES 9 A 199 GLN ALA PRO GLN GLY SER ARG SER LEU THR PRO CYS THR SEQRES 10 A 199 CYS GLY SER SER ASP LEU TYR LEU VAL THR ARG HIS ALA SEQRES 11 A 199 ASP VAL ILE PRO VAL ARG ARG ARG GLY ASP SER ARG GLY SEQRES 12 A 199 SER LEU LEU SER PRO ARG PRO ILE SER TYR LEU LYS GLY SEQRES 13 A 199 SER SER GLY GLY PRO LEU LEU CYS PRO ALA GLY HIS ALA SEQRES 14 A 199 VAL GLY ILE PHE ARG ALA ALA VAL SER THR ARG GLY VAL SEQRES 15 A 199 ALA LYS ALA VAL ASP PHE ILE PRO VAL GLU SER LEU GLU SEQRES 16 A 199 THR THR MET ARG HET ZN A1201 1 HET SO4 A1202 5 HET SO4 A1203 5 HET SO4 A1204 5 HET SO4 A1205 5 HET GKM A1206 107 HET GOL A1207 13 HET GOL A1208 12 HET GOL A1209 12 HET GOL A1210 14 HET GOL A1211 14 HETNAM ZN ZINC ION HETNAM SO4 SULFATE ION HETNAM GKM 1-METHYLCYCLOPENTYL [(2R,6S,12Z,13AS,14AR,16AS)-2-[(7- HETNAM 2 GKM METHOXY-3-METHYLQUINOXALIN-2-YL)OXY]-14A-{[(1- HETNAM 3 GKM METHYLCYCLOPROPYL)SULFONYL]CARBAMOYL}-5,16-DIOXO-1,2, HETNAM 4 GKM 3,5,6,7,8,9,10,11,13A,14,14A,15,16,16A- HETNAM 5 GKM HEXADECAHYDROCYCLOPROPA[E]PYRROLO[1,2-A][1, HETNAM 6 GKM 4]DIAZACYCLOPENTADECIN-6-YL]CARBAMATE HETNAM GOL GLYCEROL HETSYN GKM P4-3(AJ-74) HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 ZN ZN 2+ FORMUL 3 SO4 4(O4 S 2-) FORMUL 7 GKM C39 H52 N6 O9 S FORMUL 8 GOL 5(C3 H8 O3) FORMUL 13 HOH *211(H2 O) HELIX 1 AA1 HIS A 982 MET A 986 5 5 HELIX 2 AA2 GLY A 1012 GLY A 1023 1 12 HELIX 3 AA3 TYR A 1056 GLY A 1060 1 5 HELIX 4 AA4 SER A 1133 LEU A 1135 5 3 HELIX 5 AA5 VAL A 1172 ARG A 1180 1 9 SHEET 1 AA1 7 TYR A1006 GLN A1009 0 SHEET 2 AA1 7 VAL A 993 ASN A 999 -1 N ARG A 997 O GLN A1008 SHEET 3 AA1 7 VAL A1033 SER A1037 -1 O ILE A1035 N VAL A 995 SHEET 4 AA1 7 THR A1042 ILE A1048 -1 O ALA A1045 N GLN A1034 SHEET 5 AA1 7 VAL A1051 VAL A1055 -1 O TRP A1053 N THR A1046 SHEET 6 AA1 7 LEU A1082 GLN A1086 -1 O TRP A1085 N LEU A1052 SHEET 7 AA1 7 TYR A1075 ASN A1077 -1 N ASN A1077 O LEU A1082 SHEET 1 AA2 7 ASP A1103 VAL A1107 0 SHEET 2 AA2 7 VAL A1113 ARG A1118 -1 O ILE A1114 N LEU A1106 SHEET 3 AA2 7 ARG A1123 PRO A1131 -1 O SER A1125 N ARG A1117 SHEET 4 AA2 7 VAL A1163 PRO A1171 -1 O ALA A1164 N ARG A1130 SHEET 5 AA2 7 ALA A1150 THR A1160 -1 N ALA A1156 O ASP A1168 SHEET 6 AA2 7 PRO A1142 LEU A1144 -1 N LEU A1143 O VAL A1151 SHEET 7 AA2 7 ASP A1103 VAL A1107 -1 N TYR A1105 O LEU A1144 LINK SG CYS A1097 ZN ZN A1201 1555 1555 2.31 LINK SG CYS A1099 ZN ZN A1201 1555 1555 2.34 LINK SG CYS A1145 ZN ZN A1201 1555 1555 2.32 LINK ND1 HIS A1149 ZN ZN A1201 1555 1555 2.16 SITE 1 AC1 4 CYS A1097 CYS A1099 CYS A1145 HIS A1149 SITE 1 AC2 9 TYR A1006 GLN A1008 TYR A1056 GKM A1206 SITE 2 AC2 9 HOH A1348 HOH A1353 HOH A1386 HOH A1403 SITE 3 AC2 9 HOH A1406 SITE 1 AC3 7 ARG A1109 HIS A1110 GOL A1210 HOH A1333 SITE 2 AC3 7 HOH A1374 HOH A1395 HOH A1412 SITE 1 AC4 5 LYS A1080 ARG A1155 PRO A1171 SER A1174 SITE 2 AC4 5 HOH A1334 SITE 1 AC5 8 LYS A 989 GLY A 990 ALA A1039 ARG A1062 SITE 2 AC5 8 HOH A1303 HOH A1313 HOH A1324 HOH A1327 SITE 1 AC6 24 HIS A 982 GLN A1041 PHE A1043 TYR A1056 SITE 2 AC6 24 HIS A1057 GLY A1058 VAL A1078 ASP A1081 SITE 3 AC6 24 ARG A1123 LEU A1135 LYS A1136 GLY A1137 SITE 4 AC6 24 SER A1138 SER A1139 PHE A1154 ARG A1155 SITE 5 AC6 24 ALA A1156 ALA A1157 SO4 A1202 HOH A1344 SITE 6 AC6 24 HOH A1367 HOH A1405 HOH A1431 HOH A1437 SITE 1 AC7 6 LYS A 989 THR A1040 GLN A1041 ARG A1062 SITE 2 AC7 6 HOH A1350 HOH A1393 SITE 1 AC8 7 ASN A1049 GLY A1050 ASP A1121 SER A1122 SITE 2 AC8 7 ARG A1123 HOH A1392 HOH A1453 SITE 1 AC9 11 GLN A1086 CYS A1097 THR A1098 CYS A1099 SITE 2 AC9 11 GLY A1100 ARG A1118 GLU A1173 HOH A1306 SITE 3 AC9 11 HOH A1316 HOH A1361 HOH A1375 SITE 1 AD1 9 VAL A 995 GLN A1009 THR A1042 ARG A1109 SITE 2 AD1 9 SO4 A1203 HOH A1304 HOH A1310 HOH A1318 SITE 3 AD1 9 HOH A1416 SITE 1 AD2 7 GLN A1017 SER A1037 THR A1038 ALA A1039 SITE 2 AD2 7 GLN A1041 THR A1042 HOH A1438 CRYST1 55.085 59.633 58.462 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018154 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016769 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017105 0.00000