HEADER RNA 04-JUN-18 6DMC TITLE PPGPP RIBOSWITCH BOUND TO PPGPP, NATIVE STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PPGPP RIBOSWITCH; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOBACILLUS ACIDOPHILUS DSM 10332; SOURCE 3 ORGANISM_TAXID: 679936; SOURCE 4 EXPRESSION_SYSTEM: IN VITRO TRANSCRIPTION VECTOR PT7-TP(DELTAI); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 905931 KEYWDS RIBOSWITCH, NON-CODING, RNA, YKKC EXPDTA X-RAY DIFFRACTION AUTHOR A.PESELIS,A.SERGANOV REVDAT 3 13-MAR-24 6DMC 1 HETSYN LINK REVDAT 2 01-JAN-20 6DMC 1 REMARK REVDAT 1 14-NOV-18 6DMC 0 JRNL AUTH A.PESELIS,A.SERGANOV JRNL TITL YKKC RIBOSWITCHES EMPLOY AN ADD-ON HELIX TO ADJUST JRNL TITL 2 SPECIFICITY FOR POLYANIONIC LIGANDS. JRNL REF NAT. CHEM. BIOL. V. 14 887 2018 JRNL REFN ESSN 1552-4469 JRNL PMID 30120360 JRNL DOI 10.1038/S41589-018-0114-4 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0189 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 3 NUMBER OF REFLECTIONS : 27688 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.230 REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1437 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1889 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.37 REMARK 3 BIN R VALUE (WORKING SET) : 0.4230 REMARK 3 BIN FREE R VALUE SET COUNT : 92 REMARK 3 BIN FREE R VALUE : 0.3480 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 4414 REMARK 3 HETEROGEN ATOMS : 104 REMARK 3 SOLVENT ATOMS : 168 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.07000 REMARK 3 B22 (A**2) : 2.93000 REMARK 3 B33 (A**2) : -2.91000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.59000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.304 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.242 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.205 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.760 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5020 ; 0.004 ; 0.011 REMARK 3 BOND LENGTHS OTHERS (A): 2020 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7842 ; 1.060 ; 1.327 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4864 ; 1.539 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 824 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2510 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1104 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6DMC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1000234904. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-FEB-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27688 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.12800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.88600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.075 M MGCL2, 0.1 M NA-ACETATE PH REMARK 280 4.2, AND 21% PEG400 (V/V), VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 24.45850 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 213 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GTP A 1 O2G REMARK 620 2 GTP A 1 O3A 79.5 REMARK 620 3 G4P A 201 O2B 87.9 156.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 203 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 A A 13 OP2 REMARK 620 2 HOH A 318 O 158.9 REMARK 620 3 HOH A 360 O 81.1 86.3 REMARK 620 4 HOH A 378 O 87.0 74.2 80.0 REMARK 620 5 HOH A 406 O 110.2 87.6 95.6 161.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 204 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 A A 13 OP1 REMARK 620 2 G A 14 OP2 84.1 REMARK 620 3 HOH A 312 O 163.0 81.2 REMARK 620 4 HOH A 323 O 87.5 75.2 96.9 REMARK 620 5 HOH A 331 O 81.6 165.6 112.6 105.8 REMARK 620 6 HOH A 357 O 76.6 70.1 90.3 143.0 104.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 211 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G A 37 OP2 REMARK 620 2 HOH A 313 O 84.9 REMARK 620 3 HOH A 334 O 85.6 87.3 REMARK 620 4 HOH A 346 O 97.3 94.6 176.7 REMARK 620 5 HOH A 386 O 98.6 168.9 82.4 95.4 REMARK 620 6 HOH A 418 O 171.0 86.6 91.1 86.3 89.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 205 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G A 43 OP1 REMARK 620 2 A A 87 OP1 99.4 REMARK 620 3 C A 88 OP2 99.7 96.0 REMARK 620 4 HOH A 358 O 92.5 86.8 166.9 REMARK 620 5 HOH A 363 O 171.2 85.8 86.8 80.6 REMARK 620 6 HOH A 389 O 90.7 163.8 94.8 80.1 82.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 208 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G A 43 OP2 REMARK 620 2 C A 88 OP1 74.7 REMARK 620 3 HOH A 301 O 74.5 66.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 207 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 C A 44 O2 REMARK 620 2 C A 72 OP2 92.7 REMARK 620 3 HOH A 325 O 82.8 102.4 REMARK 620 4 HOH A 344 O 78.1 167.9 84.4 REMARK 620 5 HOH A 365 O 88.4 89.2 165.6 82.7 REMARK 620 6 HOH A 405 O 163.9 103.0 90.3 86.8 95.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 206 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 U A 67 OP1 REMARK 620 2 HOH A 314 O 113.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 212 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 A A 96 OP1 REMARK 620 2 A A 97 OP2 76.9 REMARK 620 3 HOH A 309 O 93.4 64.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G4P A 201 O1B REMARK 620 2 G4P A 201 O2A 82.3 REMARK 620 3 HOH A 350 O 152.3 75.1 REMARK 620 4 HOH A 377 O 82.6 76.3 76.7 REMARK 620 5 HOH A 384 O 121.0 99.9 79.2 155.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 209 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G4P A 201 O1C REMARK 620 2 HOH A 307 O 89.1 REMARK 620 3 HOH A 311 O 98.7 88.6 REMARK 620 4 HOH A 345 O 92.0 90.7 169.3 REMARK 620 5 HOH A 395 O 176.7 91.1 84.7 84.7 REMARK 620 6 HOH A 399 O 98.8 172.1 89.8 89.5 81.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 210 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 326 O REMARK 620 2 HOH A 353 O 81.1 REMARK 620 3 HOH A 366 O 169.7 89.3 REMARK 620 4 HOH A 368 O 80.8 97.7 96.9 REMARK 620 5 HOH A 421 O 98.9 74.2 81.9 171.7 REMARK 620 6 HOH A 422 O 90.0 169.7 99.2 75.7 112.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 215 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 321 O REMARK 620 2 HOH A 374 O 72.4 REMARK 620 3 HOH A 425 O 71.8 77.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 217 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 327 O REMARK 620 2 HOH A 330 O 93.9 REMARK 620 3 HOH A 332 O 90.9 98.3 REMARK 620 4 HOH A 347 O 167.3 89.9 100.5 REMARK 620 5 HOH A 419 O 79.9 91.2 167.2 88.0 REMARK 620 6 HOH A 424 O 83.9 166.6 95.0 89.6 75.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 206 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 305 O REMARK 620 2 G B 28 O6 76.1 REMARK 620 3 HOH B 303 O 146.3 86.2 REMARK 620 4 HOH B 313 O 105.0 154.0 79.1 REMARK 620 5 HOH B 326 O 73.8 70.0 73.2 85.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 210 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GTP B 1 O3A REMARK 620 2 GTP B 1 O2A 56.7 REMARK 620 3 G4P B 201 O2B 131.7 76.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 209 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G B 36 OP1 REMARK 620 2 C B 53 OP2 57.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 203 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G B 43 OP1 REMARK 620 2 A B 87 OP1 75.5 REMARK 620 3 C B 88 OP2 68.6 66.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 205 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G B 43 OP2 REMARK 620 2 C B 88 OP1 94.9 REMARK 620 3 HOH B 305 O 89.0 79.9 REMARK 620 4 HOH B 337 O 163.6 101.5 93.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 204 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 C B 44 O2 REMARK 620 2 C B 72 OP2 86.6 REMARK 620 3 HOH B 302 O 73.4 81.0 REMARK 620 4 HOH B 332 O 80.4 155.9 75.9 REMARK 620 5 HOH B 339 O 144.7 105.7 76.0 75.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 213 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G B 66 OP1 REMARK 620 2 HOH B 301 O 135.3 REMARK 620 3 HOH B 312 O 71.9 68.9 REMARK 620 4 HOH B 314 O 72.1 73.5 67.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G4P B 201 O1B REMARK 620 2 G4P B 201 O2A 72.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 207 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 308 O REMARK 620 2 HOH B 317 O 65.6 REMARK 620 3 HOH B 321 O 68.7 71.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 211 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 306 O REMARK 620 2 HOH B 329 O 69.5 REMARK 620 3 HOH B 330 O 74.2 66.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 212 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 323 O REMARK 620 2 HOH B 327 O 163.8 REMARK 620 3 HOH B 342 O 88.5 83.0 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue G4P A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 209 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 210 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 211 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 212 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 213 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 214 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 215 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 217 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 220 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue G4P B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 209 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 210 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 211 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 212 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 213 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide GTP B 1 and G B 2 DBREF 6DMC A 1 102 PDB 6DMC 6DMC 1 102 DBREF 6DMC B 1 102 PDB 6DMC 6DMC 1 102 SEQRES 1 A 102 GTP G A A G U G U A C C U A SEQRES 2 A 102 G G G A U C C A C C U C G SEQRES 3 A 102 A G A G A G G A A G G A C SEQRES 4 A 102 C A A G C G G U A C A G G SEQRES 5 A 102 C C U A C U U C G G U A G SEQRES 6 A 102 G U U A C A C C G U G G G SEQRES 7 A 102 G A U A A A A G A C C C G SEQRES 8 A 102 U G G C A A G U U U CCC SEQRES 1 B 102 GTP G A A G U G U A C C U A SEQRES 2 B 102 G G G A U C C A C C U C G SEQRES 3 B 102 A G A G A G G A A G G A C SEQRES 4 B 102 C A A G C G G U A C A G G SEQRES 5 B 102 C C U A C U U C G G U A G SEQRES 6 B 102 G U U A C A C C G U G G G SEQRES 7 B 102 G A U A A A A G A C C C G SEQRES 8 B 102 U G G C A A G U U U CCC HET GTP A 1 32 HET CCC A 102 23 HET GTP B 1 32 HET CCC B 102 23 HET G4P A 201 36 HET MG A 202 1 HET MG A 203 1 HET MG A 204 1 HET MG A 205 1 HET MG A 206 1 HET MG A 207 1 HET MG A 208 1 HET MG A 209 1 HET MG A 210 1 HET MG A 211 1 HET MG A 212 1 HET MG A 213 1 HET NA A 214 1 HET NA A 215 1 HET NA A 216 1 HET NA A 217 1 HET NA A 218 1 HET NA A 219 1 HET K A 220 1 HET G4P B 201 36 HET MG B 202 1 HET MG B 203 1 HET MG B 204 1 HET MG B 205 1 HET MG B 206 1 HET MG B 207 1 HET MG B 208 1 HET MG B 209 1 HET MG B 210 1 HET NA B 211 1 HET NA B 212 1 HET NA B 213 1 HET NA B 214 1 HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE HETNAM CCC CYTIDINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE HETNAM G4P GUANOSINE-5',3'-TETRAPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM NA SODIUM ION HETNAM K POTASSIUM ION HETSYN G4P GUANOSINE TETRAPHOSPHATE;PPGPP FORMUL 1 GTP 2(C10 H16 N5 O14 P3) FORMUL 1 CCC 2(C9 H13 N3 O10 P2) FORMUL 3 G4P 2(C10 H17 N5 O17 P4) FORMUL 4 MG 21(MG 2+) FORMUL 16 NA 10(NA 1+) FORMUL 22 K K 1+ FORMUL 37 HOH *168(H2 O) LINK O3' GTP A 1 P G A 2 1555 1555 1.61 LINK O3' U A 101 P CCC A 102 1555 1555 1.61 LINK O3' GTP B 1 P G B 2 1555 1555 1.61 LINK O3' U B 101 P CCC B 102 1555 1555 1.61 LINK O2G GTP A 1 MG MG A 213 1555 1555 2.86 LINK O3A GTP A 1 MG MG A 213 1555 1555 2.25 LINK OP2 C A 11 NA NA A 214 1555 1555 2.78 LINK OP2 A A 13 MG MG A 203 1555 1555 2.05 LINK OP1 A A 13 MG MG A 204 1555 1555 2.25 LINK OP2 G A 14 MG MG A 204 1555 1555 2.30 LINK OP2 G A 37 MG MG A 211 1555 1555 1.84 LINK OP1 G A 43 MG MG A 205 1555 1555 2.01 LINK OP2 G A 43 MG MG A 208 1555 1555 2.41 LINK O2 C A 44 MG MG A 207 1555 1555 2.25 LINK OP1 U A 67 MG MG A 206 1555 2544 1.96 LINK OP2 C A 72 MG MG A 207 1555 1555 1.97 LINK OP1 A A 87 MG MG A 205 1555 1555 1.89 LINK OP2 C A 88 MG MG A 205 1555 1555 1.93 LINK OP1 C A 88 MG MG A 208 1555 1555 2.36 LINK OP1 A A 96 MG MG A 212 1555 1555 1.96 LINK OP2 A A 97 MG MG A 212 1555 1555 2.51 LINK O1B G4P A 201 MG MG A 202 1555 1555 2.12 LINK O2A G4P A 201 MG MG A 202 1555 1555 2.21 LINK O1C G4P A 201 MG MG A 209 1555 1555 1.92 LINK O2B G4P A 201 MG MG A 213 1555 1555 2.74 LINK MG MG A 202 O HOH A 350 1555 1555 2.24 LINK MG MG A 202 O HOH A 377 1555 1555 2.40 LINK MG MG A 202 O HOH A 384 1555 1555 1.91 LINK MG MG A 203 O HOH A 318 1555 1555 2.13 LINK MG MG A 203 O HOH A 360 1555 1555 2.16 LINK MG MG A 203 O HOH A 378 1555 1555 2.09 LINK MG MG A 203 O HOH A 406 1555 1555 2.02 LINK MG MG A 204 O HOH A 312 1555 2544 2.08 LINK MG MG A 204 O HOH A 323 1555 1555 2.00 LINK MG MG A 204 O HOH A 331 1555 2544 1.93 LINK MG MG A 204 O HOH A 357 1555 1555 2.45 LINK MG MG A 205 O HOH A 358 1555 1555 2.08 LINK MG MG A 205 O HOH A 363 1555 1555 2.15 LINK MG MG A 205 O HOH A 389 1555 1555 2.10 LINK MG MG A 206 O HOH A 314 1555 1555 2.43 LINK MG MG A 207 O HOH A 325 1555 1555 1.94 LINK MG MG A 207 O HOH A 344 1555 1555 2.10 LINK MG MG A 207 O HOH A 365 1555 1555 1.98 LINK MG MG A 207 O HOH A 405 1555 1555 2.12 LINK MG MG A 208 O HOH A 301 1555 1555 1.93 LINK MG MG A 209 O HOH A 307 1555 1555 1.96 LINK MG MG A 209 O HOH A 311 1555 1555 2.02 LINK MG MG A 209 O HOH A 345 1555 1555 2.04 LINK MG MG A 209 O HOH A 395 1555 1555 2.12 LINK MG MG A 209 O HOH A 399 1555 1555 2.03 LINK MG MG A 210 O HOH A 326 1555 1555 2.23 LINK MG MG A 210 O HOH A 353 1555 1555 2.31 LINK MG MG A 210 O HOH A 366 1555 1555 2.02 LINK MG MG A 210 O HOH A 368 1555 1555 2.26 LINK MG MG A 210 O HOH A 421 1555 1555 2.49 LINK MG MG A 210 O HOH A 422 1555 1555 2.36 LINK MG MG A 211 O HOH A 313 1555 1555 1.98 LINK MG MG A 211 O HOH A 334 1555 1555 2.08 LINK MG MG A 211 O HOH A 346 1555 1555 2.16 LINK MG MG A 211 O HOH A 386 1555 1555 1.97 LINK MG MG A 211 O HOH A 418 1555 1555 1.86 LINK MG MG A 212 O HOH A 309 1555 1555 2.30 LINK NA NA A 215 O HOH A 321 1555 1555 2.29 LINK NA NA A 215 O HOH A 374 1555 1555 2.19 LINK NA NA A 215 O HOH A 425 1555 1555 2.00 LINK NA NA A 217 O HOH A 327 1555 1555 2.18 LINK NA NA A 217 O HOH A 330 1555 1555 2.10 LINK NA NA A 217 O HOH A 332 1555 1555 2.01 LINK NA NA A 217 O HOH A 347 1555 1555 2.21 LINK NA NA A 217 O HOH A 419 1555 1555 2.31 LINK NA NA A 217 O HOH A 424 1555 1555 2.01 LINK K K A 220 O HOH A 386 1555 1555 3.47 LINK O HOH A 305 MG MG B 206 1555 1555 2.15 LINK O3A GTP B 1 MG MG B 210 1555 1555 2.90 LINK O2A GTP B 1 MG MG B 210 1555 1555 2.43 LINK O6 G B 28 MG MG B 206 1555 1555 2.41 LINK OP1 G B 36 MG MG B 209 1555 1555 2.36 LINK OP1 G B 43 MG MG B 203 1555 1555 2.38 LINK OP2 G B 43 MG MG B 205 1555 1555 1.92 LINK O2 C B 44 MG MG B 204 1555 1555 2.43 LINK OP2 C B 53 MG MG B 209 1555 2655 2.42 LINK OP1 G B 66 NA NA B 213 1555 1555 2.17 LINK OP2 C B 72 MG MG B 204 1555 1555 1.86 LINK OP1 A B 87 MG MG B 203 1555 1555 2.41 LINK OP2 C B 88 MG MG B 203 1555 1555 2.58 LINK OP1 C B 88 MG MG B 205 1555 1555 2.08 LINK O1B G4P B 201 MG MG B 202 1555 1555 2.65 LINK O2A G4P B 201 MG MG B 202 1555 1555 2.48 LINK O1C G4P B 201 MG MG B 208 1555 1555 2.29 LINK O2B G4P B 201 MG MG B 210 1555 1555 2.44 LINK MG MG B 204 O HOH B 302 1555 1555 2.52 LINK MG MG B 204 O HOH B 332 1555 1555 1.94 LINK MG MG B 204 O HOH B 339 1555 1555 2.47 LINK MG MG B 205 O HOH B 305 1555 1555 1.92 LINK MG MG B 205 O HOH B 337 1555 1555 1.89 LINK MG MG B 206 O HOH B 303 1555 1554 2.30 LINK MG MG B 206 O HOH B 313 1555 1554 1.93 LINK MG MG B 206 O HOH B 326 1555 1555 2.37 LINK MG MG B 207 O HOH B 308 1555 1555 2.50 LINK MG MG B 207 O HOH B 317 1555 1555 2.49 LINK MG MG B 207 O HOH B 321 1555 1555 2.38 LINK NA NA B 211 O HOH B 306 1555 1555 2.26 LINK NA NA B 211 O HOH B 329 1555 1555 2.37 LINK NA NA B 211 O HOH B 330 1555 1555 2.28 LINK NA NA B 212 O HOH B 323 1555 1555 2.91 LINK NA NA B 212 O HOH B 327 1555 1555 2.29 LINK NA NA B 212 O HOH B 342 1555 1555 2.36 LINK NA NA B 213 O HOH B 301 1555 2645 2.36 LINK NA NA B 213 O HOH B 312 1555 1555 2.34 LINK NA NA B 213 O HOH B 314 1555 1555 2.36 SITE 1 AC1 26 A A 3 A A 4 G A 5 G A 43 SITE 2 AC1 26 C A 70 A A 71 C A 72 A A 96 SITE 3 AC1 26 MG A 202 MG A 209 MG A 213 HOH A 303 SITE 4 AC1 26 HOH A 307 HOH A 311 HOH A 316 HOH A 319 SITE 5 AC1 26 HOH A 324 HOH A 325 HOH A 326 HOH A 341 SITE 6 AC1 26 HOH A 345 HOH A 350 HOH A 362 HOH A 373 SITE 7 AC1 26 HOH A 377 HOH A 399 SITE 1 AC2 5 A A 3 G4P A 201 HOH A 350 HOH A 377 SITE 2 AC2 5 HOH A 384 SITE 1 AC3 6 A A 13 G A 14 HOH A 318 HOH A 360 SITE 2 AC3 6 HOH A 378 HOH A 406 SITE 1 AC4 4 A A 13 G A 14 HOH A 323 HOH A 357 SITE 1 AC5 6 G A 43 A A 87 C A 88 HOH A 358 SITE 2 AC5 6 HOH A 363 HOH A 389 SITE 1 AC6 1 HOH A 314 SITE 1 AC7 6 C A 44 C A 72 HOH A 325 HOH A 344 SITE 2 AC7 6 HOH A 365 HOH A 405 SITE 1 AC8 3 G A 43 C A 88 HOH A 301 SITE 1 AC9 6 G4P A 201 HOH A 307 HOH A 311 HOH A 345 SITE 2 AC9 6 HOH A 395 HOH A 399 SITE 1 AD1 6 HOH A 326 HOH A 353 HOH A 366 HOH A 368 SITE 2 AD1 6 HOH A 421 HOH A 422 SITE 1 AD2 6 G A 37 HOH A 313 HOH A 334 HOH A 346 SITE 2 AD2 6 HOH A 386 HOH A 418 SITE 1 AD3 3 A A 96 A A 97 HOH A 309 SITE 1 AD4 2 GTP A 1 G4P A 201 SITE 1 AD5 2 C A 11 A A 41 SITE 1 AD6 3 HOH A 321 HOH A 374 HOH A 425 SITE 1 AD7 6 HOH A 327 HOH A 330 HOH A 332 HOH A 347 SITE 2 AD7 6 HOH A 419 HOH A 424 SITE 1 AD8 4 A A 17 G A 36 G A 37 A A 38 SITE 1 AD9 18 GTP B 1 G B 2 A B 3 A B 4 SITE 2 AD9 18 G B 5 G B 43 C B 70 A B 71 SITE 3 AD9 18 C B 72 C B 73 A B 96 G B 98 SITE 4 AD9 18 U B 99 MG B 202 MG B 208 MG B 210 SITE 5 AD9 18 HOH B 302 HOH B 311 SITE 1 AE1 2 A B 3 G4P B 201 SITE 1 AE2 3 G B 43 A B 87 C B 88 SITE 1 AE3 5 C B 44 C B 72 HOH B 302 HOH B 332 SITE 2 AE3 5 HOH B 339 SITE 1 AE4 4 G B 43 C B 88 HOH B 305 HOH B 337 SITE 1 AE5 5 HOH A 305 G B 28 HOH B 303 HOH B 313 SITE 2 AE5 5 HOH B 326 SITE 1 AE6 3 HOH B 308 HOH B 317 HOH B 321 SITE 1 AE7 1 G4P B 201 SITE 1 AE8 1 G B 36 SITE 1 AE9 2 GTP B 1 G4P B 201 SITE 1 AF1 3 HOH B 306 HOH B 329 HOH B 330 SITE 1 AF2 4 G B 32 HOH B 323 HOH B 327 HOH B 342 SITE 1 AF3 3 G B 66 HOH B 312 HOH B 314 SITE 1 AF4 11 GTP A 1 U A 101 CCC A 102 A B 3 SITE 2 AF4 11 C B 95 U B 101 CCC B 102 G4P B 201 SITE 3 AF4 11 MG B 210 HOH B 325 HOH B 334 CRYST1 78.162 48.917 78.723 90.00 97.33 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012794 0.000000 0.001645 0.00000 SCALE2 0.000000 0.020443 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012807 0.00000 HETATM 1 PG GTP A 1 26.986 -2.375 -54.720 1.00 83.76 P HETATM 2 O1G GTP A 1 27.474 -3.418 -55.697 1.00 80.83 O HETATM 3 O2G GTP A 1 25.607 -1.913 -55.138 1.00 80.36 O HETATM 4 O3G GTP A 1 26.915 -2.979 -53.332 1.00 81.48 O HETATM 5 O3B GTP A 1 28.031 -1.136 -54.686 1.00 77.55 O HETATM 6 PB GTP A 1 27.715 0.311 -55.341 1.00 75.40 P HETATM 7 O1B GTP A 1 26.917 0.154 -56.623 1.00 75.17 O HETATM 8 O2B GTP A 1 28.994 1.081 -55.602 1.00 65.91 O HETATM 9 O3A GTP A 1 26.791 1.031 -54.228 1.00 64.69 O HETATM 10 PA GTP A 1 27.467 1.883 -53.045 1.00 57.97 P HETATM 11 O1A GTP A 1 28.821 1.301 -52.710 1.00 62.82 O HETATM 12 O2A GTP A 1 26.620 1.898 -51.795 1.00 59.14 O HETATM 13 O5' GTP A 1 27.651 3.341 -53.696 1.00 49.10 O HETATM 14 C5' GTP A 1 27.906 4.463 -52.896 1.00 43.49 C HETATM 15 C4' GTP A 1 27.711 5.762 -53.679 1.00 39.98 C HETATM 16 O4' GTP A 1 28.061 5.671 -55.042 1.00 37.39 O HETATM 17 C3' GTP A 1 26.267 6.214 -53.704 1.00 37.86 C HETATM 18 O3' GTP A 1 25.913 6.838 -52.484 1.00 36.73 O HETATM 19 C2' GTP A 1 26.208 7.162 -54.888 1.00 36.68 C HETATM 20 O2' GTP A 1 26.779 8.411 -54.563 1.00 35.34 O HETATM 21 C1' GTP A 1 27.105 6.363 -55.838 1.00 36.09 C HETATM 22 N9 GTP A 1 26.289 5.412 -56.647 1.00 34.39 N HETATM 23 C8 GTP A 1 26.354 4.036 -56.626 1.00 33.30 C HETATM 24 N7 GTP A 1 25.451 3.536 -57.495 1.00 32.05 N HETATM 25 C5 GTP A 1 24.819 4.564 -58.076 1.00 31.56 C HETATM 26 C6 GTP A 1 23.820 4.603 -59.027 1.00 31.02 C HETATM 27 O6 GTP A 1 23.372 3.563 -59.484 1.00 31.35 O HETATM 28 N1 GTP A 1 23.339 5.821 -59.455 1.00 30.46 N HETATM 29 C2 GTP A 1 23.865 6.998 -58.944 1.00 29.98 C HETATM 30 N2 GTP A 1 23.385 8.166 -59.376 1.00 29.23 N HETATM 31 N3 GTP A 1 24.861 6.953 -57.985 1.00 29.79 N HETATM 32 C4 GTP A 1 25.332 5.752 -57.565 1.00 31.72 C