HEADER RNA 05-JUN-18 6DME TITLE PPGPP RIBOSWITCH BOUND TO PPGPP, THALLIUM ACETATE STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PPGPP RIBOSWITCH; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOBACILLUS ACIDOPHILUS DSM 10332; SOURCE 3 ORGANISM_TAXID: 679936; SOURCE 4 EXPRESSION_SYSTEM: IN VITRO TRANSCRIPTION VECTOR PT7-TP(DELTAI); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 905931 KEYWDS RIBOSWITCH, NON-CODING, RNA, YKKC EXPDTA X-RAY DIFFRACTION AUTHOR A.PESELIS,A.SERGANOV REVDAT 4 22-MAY-24 6DME 1 REMARK REVDAT 3 27-APR-22 6DME 1 SPRSDE HETSYN LINK REVDAT 2 01-JAN-20 6DME 1 SPRSDE REVDAT 1 14-NOV-18 6DME 0 JRNL AUTH A.PESELIS,A.SERGANOV JRNL TITL YKKC RIBOSWITCHES EMPLOY AN ADD-ON HELIX TO ADJUST JRNL TITL 2 SPECIFICITY FOR POLYANIONIC LIGANDS. JRNL REF NAT. CHEM. BIOL. V. 14 887 2018 JRNL REFN ESSN 1552-4469 JRNL PMID 30120360 JRNL DOI 10.1038/S41589-018-0114-4 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.52 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.450 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 3 NUMBER OF REFLECTIONS : 15858 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.140 REMARK 3 FREE R VALUE TEST SET COUNT : 1608 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 27.5211 - 5.9900 0.95 1324 145 0.1936 0.2319 REMARK 3 2 5.9900 - 4.7624 0.97 1331 150 0.1442 0.1830 REMARK 3 3 4.7624 - 4.1628 0.98 1370 154 0.1569 0.1676 REMARK 3 4 4.1628 - 3.7832 0.97 1339 158 0.1508 0.2382 REMARK 3 5 3.7832 - 3.5126 0.97 1308 146 0.1831 0.1929 REMARK 3 6 3.5126 - 3.3059 0.96 1304 155 0.1948 0.2753 REMARK 3 7 3.3059 - 3.1406 0.93 1321 140 0.2070 0.2532 REMARK 3 8 3.1406 - 3.0040 0.95 1295 159 0.2438 0.2804 REMARK 3 9 3.0040 - 2.8885 0.92 1256 135 0.2669 0.3327 REMARK 3 10 2.8885 - 2.7890 0.89 1261 131 0.3296 0.3258 REMARK 3 11 2.7890 - 2.7018 0.83 1141 135 0.3787 0.4355 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.810 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2506 REMARK 3 ANGLE : 0.782 3914 REMARK 3 CHIRALITY : 0.058 512 REMARK 3 PLANARITY : 0.003 104 REMARK 3 DIHEDRAL : 19.829 1248 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6DME COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1000234924. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-FEB-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.105 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15858 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.23700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.075 M MGCL2, 0.1 M NA-ACETATE PH REMARK 280 4.2, AND 21% PEG400 (V/V), VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 50.09200 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.90800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 50.09200 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 25.90800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GTP A 1 PG O1G O2G O3G REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 TL A 215 TL REMARK 620 N RES CSSEQI ATOM REMARK 620 1 A A 17 N1 REMARK 620 2 A A 35 O2' 79.4 REMARK 620 3 A A 35 N3 67.6 77.5 REMARK 620 4 G A 36 N7 136.5 78.4 71.3 REMARK 620 5 G A 36 O6 109.5 123.2 57.8 56.4 REMARK 620 6 G A 37 N7 140.8 129.3 136.3 80.8 78.8 REMARK 620 7 G A 37 O6 81.2 159.4 101.3 121.1 70.2 65.3 REMARK 620 8 A A 38 N6 72.0 89.3 139.2 143.8 147.5 81.3 78.3 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 204 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G A 43 OP2 REMARK 620 2 C A 88 OP1 87.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 205 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G A 43 OP1 REMARK 620 2 A A 87 OP1 67.1 REMARK 620 3 C A 88 OP2 72.3 73.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 206 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 C A 44 O2 REMARK 620 2 C A 72 OP2 73.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 A A 96 OP1 REMARK 620 2 A A 96 OP2 54.1 REMARK 620 3 A A 97 OP2 69.6 95.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 214 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G4P A 201 O2C REMARK 620 2 G4P A 201 O1D 62.4 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue G4P A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 210 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 212 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 213 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 214 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TL A 215 DBREF 6DME A 1 102 PDB 6DME 6DME 1 102 SEQRES 1 A 102 GTP G A A G U G U A C C U A SEQRES 2 A 102 G G G A U C C A C C U C G SEQRES 3 A 102 A G A G A G G A A G G A C SEQRES 4 A 102 C A A G C G G U A C A G G SEQRES 5 A 102 C C U A C U U C G G U A G SEQRES 6 A 102 G U U A C A C C G U G G G SEQRES 7 A 102 G A U A A A A G A C C C G SEQRES 8 A 102 U G G C A A G U U U CCC HET GTP A 1 28 HET CCC A 102 23 HET G4P A 201 36 HET MG A 202 1 HET MG A 203 1 HET MG A 204 1 HET MG A 205 1 HET MG A 206 1 HET MG A 207 1 HET MG A 208 1 HET MG A 209 1 HET MG A 210 1 HET MG A 211 1 HET MG A 212 1 HET MG A 213 1 HET MG A 214 1 HET TL A 215 1 HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE HETNAM CCC CYTIDINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE HETNAM G4P GUANOSINE-5',3'-TETRAPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM TL THALLIUM (I) ION HETSYN G4P GUANOSINE TETRAPHOSPHATE;PPGPP FORMUL 1 GTP C10 H16 N5 O14 P3 FORMUL 1 CCC C9 H13 N3 O10 P2 FORMUL 2 G4P C10 H17 N5 O17 P4 FORMUL 3 MG 13(MG 2+) FORMUL 16 TL TL 1+ FORMUL 17 HOH *8(H2 O) LINK O3' GTP A 1 P G A 2 1555 1555 1.61 LINK O3' U A 101 P CCC A 102 1555 1555 1.61 LINK N1 A A 17 TL TL A 215 1555 1555 2.87 LINK O2' A A 35 TL TL A 215 1555 1555 3.54 LINK N3 A A 35 TL TL A 215 1555 1555 3.21 LINK N7 G A 36 TL TL A 215 1555 1555 3.31 LINK O6 G A 36 TL TL A 215 1555 1555 3.21 LINK N7 G A 37 TL TL A 215 1555 1555 2.84 LINK O6 G A 37 TL TL A 215 1555 1555 2.88 LINK N6 A A 38 TL TL A 215 1555 1555 3.29 LINK OP2 G A 43 MG MG A 204 1555 1555 2.13 LINK OP1 G A 43 MG MG A 205 1555 1555 2.63 LINK O2 C A 44 MG MG A 206 1555 1555 2.29 LINK OP1 G A 66 MG MG A 213 1555 1555 2.55 LINK OP2 C A 72 MG MG A 206 1555 1555 2.37 LINK OP1 A A 87 MG MG A 205 1555 1555 2.45 LINK OP1 C A 88 MG MG A 204 1555 1555 2.10 LINK OP2 C A 88 MG MG A 205 1555 1555 2.48 LINK OP1 A A 96 MG MG A 202 1555 1555 2.62 LINK OP2 A A 96 MG MG A 202 1555 1555 2.93 LINK OP2 A A 97 MG MG A 202 1555 1555 2.07 LINK O1A G4P A 201 MG MG A 203 1555 1555 2.39 LINK O2C G4P A 201 MG MG A 214 1555 1555 2.66 LINK O1D G4P A 201 MG MG A 214 1555 1555 2.96 SITE 1 AC1 11 G A 5 U A 6 G A 43 C A 70 SITE 2 AC1 11 A A 71 C A 72 G A 94 A A 96 SITE 3 AC1 11 MG A 203 MG A 214 HOH A 302 SITE 1 AC2 2 A A 96 A A 97 SITE 1 AC3 1 G4P A 201 SITE 1 AC4 2 G A 43 C A 88 SITE 1 AC5 3 G A 43 A A 87 C A 88 SITE 1 AC6 2 C A 44 C A 72 SITE 1 AC7 1 G A 28 SITE 1 AC8 1 G A 52 SITE 1 AC9 1 G A 66 SITE 1 AD1 2 A A 3 G4P A 201 SITE 1 AD2 5 A A 17 A A 35 G A 36 G A 37 SITE 2 AD2 5 A A 38 CRYST1 100.184 51.816 77.862 90.00 128.10 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009982 0.000000 0.007827 0.00000 SCALE2 0.000000 0.019299 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016321 0.00000 HETATM 1 O3B GTP A 1 -54.688 -23.650 64.699 1.00 78.07 O HETATM 2 PB GTP A 1 -53.646 -24.316 63.828 1.00 86.75 P HETATM 3 O1B GTP A 1 -54.260 -24.551 62.355 1.00 23.49 O HETATM 4 O2B GTP A 1 -52.376 -23.497 63.782 1.00 81.25 O HETATM 5 O3A GTP A 1 -53.361 -25.793 64.409 1.00 41.46 O HETATM 6 PA GTP A 1 -54.575 -26.837 64.557 1.00 52.31 P HETATM 7 O1A GTP A 1 -55.868 -26.157 64.172 1.00 58.16 O HETATM 8 O2A GTP A 1 -54.641 -27.373 65.969 1.00 47.29 O HETATM 9 O5' GTP A 1 -54.280 -28.024 63.510 1.00 33.04 O HETATM 10 C5' GTP A 1 -54.759 -29.317 63.814 1.00 24.80 C HETATM 11 C4' GTP A 1 -53.664 -30.362 63.666 1.00 21.13 C HETATM 12 O4' GTP A 1 -52.831 -30.062 62.572 1.00 20.65 O HETATM 13 C3' GTP A 1 -52.699 -30.392 64.827 1.00 19.44 C HETATM 14 O3' GTP A 1 -53.245 -31.039 65.954 1.00 25.70 O HETATM 15 C2' GTP A 1 -51.498 -31.132 64.259 1.00 24.32 C HETATM 16 O2' GTP A 1 -51.778 -32.515 64.206 1.00 24.33 O HETATM 17 C1' GTP A 1 -51.529 -30.544 62.846 1.00 17.98 C HETATM 18 N9 GTP A 1 -50.582 -29.415 62.848 1.00 13.99 N HETATM 19 C8 GTP A 1 -50.906 -28.083 62.823 1.00 13.56 C HETATM 20 N7 GTP A 1 -49.761 -27.362 62.841 1.00 9.46 N HETATM 21 C5 GTP A 1 -48.712 -28.214 62.875 1.00 7.52 C HETATM 22 C6 GTP A 1 -47.338 -28.009 62.900 1.00 9.50 C HETATM 23 O6 GTP A 1 -46.872 -26.870 62.894 1.00 9.43 O HETATM 24 N1 GTP A 1 -46.494 -29.098 62.930 1.00 11.49 N HETATM 25 C2 GTP A 1 -47.015 -30.378 62.936 1.00 11.36 C HETATM 26 N2 GTP A 1 -46.199 -31.427 62.968 1.00 12.05 N HETATM 27 N3 GTP A 1 -48.378 -30.571 62.909 1.00 6.93 N HETATM 28 C4 GTP A 1 -49.214 -29.508 62.879 1.00 7.99 C