HEADER HYDROLASE/DNA/RNA 09-JUN-18 6DPB TITLE CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX TITLE 2 WITH AN RNA/DNA HYBRID: REACTION IN 8 MM MN2+ AND 200 MM K+ FOR 40 S TITLE 3 AT 21 C COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBONUCLEASE H; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RNASE H; COMPND 5 EC: 3.1.26.4; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: RNA (5'-R(*AP*CP*AP*U)-3') PORTION OF CLEAVED RNA; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: RNA (5'-R(P*CP*G)-3') PORTION OF CLEAVED RNA; COMPND 13 CHAIN: b; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 4; COMPND 16 MOLECULE: DNA (5'-D(*CP*GP*AP*TP*GP*T)-3'); COMPND 17 CHAIN: C; COMPND 18 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS HALODURANS (STRAIN ATCC BAA-125 / DSM SOURCE 3 18197 / FERM 7344 / JCM 9153 / C-125); SOURCE 4 ORGANISM_TAXID: 272558; SOURCE 5 STRAIN: ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125; SOURCE 6 GENE: RNHA, BH0863; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET15B; SOURCE 12 MOL_ID: 2; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: SYNTHETIC; SOURCE 15 ORGANISM_TAXID: 32630; SOURCE 16 MOL_ID: 3; SOURCE 17 SYNTHETIC: YES; SOURCE 18 ORGANISM_SCIENTIFIC: SYNTHETIC; SOURCE 19 ORGANISM_TAXID: 32630; SOURCE 20 MOL_ID: 4; SOURCE 21 SYNTHETIC: YES; SOURCE 22 ORGANISM_SCIENTIFIC: SYNTHETIC; SOURCE 23 ORGANISM_TAXID: 32630 KEYWDS PROTEIN-RNA-DNA COMPLEX, DOUBLE HELIX, RNA HYDROLYSIS, IN CRYSTALLO KEYWDS 2 CATALYSIS, METAL DEPENDENT CATALYSIS, MONOVALENT CATIONS, DIVALENT KEYWDS 3 CATIONS, HYDROLASE-DNA-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR N.L.SAMARA,W.YANG REVDAT 2 11-OCT-23 6DPB 1 LINK REVDAT 1 15-AUG-18 6DPB 0 JRNL AUTH N.L.SAMARA,W.YANG JRNL TITL CATION TRAFFICKING PROPELS RNA HYDROLYSIS. JRNL REF NAT. STRUCT. MOL. BIOL. V. 25 715 2018 JRNL REFN ESSN 1545-9985 JRNL PMID 30076410 JRNL DOI 10.1038/S41594-018-0099-4 REMARK 2 REMARK 2 RESOLUTION. 1.32 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.32 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.4 REMARK 3 NUMBER OF REFLECTIONS : 41027 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.150 REMARK 3 R VALUE (WORKING SET) : 0.148 REMARK 3 FREE R VALUE : 0.172 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.890 REMARK 3 FREE R VALUE TEST SET COUNT : 2006 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.9023 - 3.1913 0.98 2999 163 0.1207 0.1408 REMARK 3 2 3.1913 - 2.5333 0.98 2914 163 0.1426 0.1775 REMARK 3 3 2.5333 - 2.2131 0.97 2867 160 0.1438 0.1679 REMARK 3 4 2.2131 - 2.0108 0.97 2854 151 0.1475 0.1668 REMARK 3 5 2.0108 - 1.8667 0.96 2812 143 0.1527 0.1969 REMARK 3 6 1.8667 - 1.7567 0.96 2872 126 0.1592 0.1787 REMARK 3 7 1.7567 - 1.6687 0.95 2802 124 0.1543 0.1637 REMARK 3 8 1.6687 - 1.5960 0.95 2789 154 0.1625 0.1894 REMARK 3 9 1.5960 - 1.5346 0.94 2792 128 0.1720 0.1958 REMARK 3 10 1.5346 - 1.4816 0.94 2719 142 0.1959 0.2118 REMARK 3 11 1.4816 - 1.4353 0.93 2716 149 0.2218 0.2278 REMARK 3 12 1.4353 - 1.3943 0.93 2723 138 0.2564 0.2649 REMARK 3 13 1.3943 - 1.3576 0.93 2711 144 0.2877 0.3208 REMARK 3 14 1.3576 - 1.3245 0.83 2451 121 0.3213 0.2879 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.200 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.36 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1491 REMARK 3 ANGLE : 1.059 2052 REMARK 3 CHIRALITY : 0.070 226 REMARK 3 PLANARITY : 0.007 212 REMARK 3 DIHEDRAL : 21.937 591 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 61:66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.4779 -4.2769 18.7267 REMARK 3 T TENSOR REMARK 3 T11: 0.2118 T22: 0.5016 REMARK 3 T33: 0.2730 T12: 0.0910 REMARK 3 T13: 0.0569 T23: 0.0425 REMARK 3 L TENSOR REMARK 3 L11: 6.6020 L22: 7.5395 REMARK 3 L33: 3.2965 L12: 0.1039 REMARK 3 L13: -1.4328 L23: 2.9937 REMARK 3 S TENSOR REMARK 3 S11: 0.1380 S12: 0.8910 S13: 0.2756 REMARK 3 S21: -0.7076 S22: -0.3250 S23: -0.6071 REMARK 3 S31: -0.0067 S32: 1.4667 S33: 0.1225 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 67:75 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.3681 -6.2731 16.2548 REMARK 3 T TENSOR REMARK 3 T11: 0.1951 T22: 0.1769 REMARK 3 T33: 0.1674 T12: 0.0191 REMARK 3 T13: 0.0052 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 2.0715 L22: 1.9445 REMARK 3 L33: 2.1929 L12: 1.4841 REMARK 3 L13: 1.8390 L23: 1.5849 REMARK 3 S TENSOR REMARK 3 S11: 0.1137 S12: 0.1975 S13: -0.0598 REMARK 3 S21: -0.1647 S22: -0.1220 S23: 0.1155 REMARK 3 S31: 0.1383 S32: 0.0342 S33: -0.0320 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 76:87 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.8200 -6.5793 16.6481 REMARK 3 T TENSOR REMARK 3 T11: 0.1966 T22: 0.1492 REMARK 3 T33: 0.1801 T12: 0.0097 REMARK 3 T13: 0.0075 T23: -0.0180 REMARK 3 L TENSOR REMARK 3 L11: 9.3245 L22: 0.7095 REMARK 3 L33: 5.8405 L12: -0.7656 REMARK 3 L13: 6.3818 L23: -0.8593 REMARK 3 S TENSOR REMARK 3 S11: 0.3519 S12: 0.2007 S13: -0.5730 REMARK 3 S21: -0.1665 S22: -0.1114 S23: 0.0964 REMARK 3 S31: 0.2269 S32: 0.0653 S33: -0.2980 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 88:96 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.8477 -11.6536 23.8565 REMARK 3 T TENSOR REMARK 3 T11: 0.2213 T22: 0.1714 REMARK 3 T33: 0.2911 T12: 0.0378 REMARK 3 T13: 0.0080 T23: 0.0203 REMARK 3 L TENSOR REMARK 3 L11: 5.5726 L22: 5.6578 REMARK 3 L33: 8.8826 L12: -3.0984 REMARK 3 L13: -6.7231 L23: 2.0197 REMARK 3 S TENSOR REMARK 3 S11: -0.1893 S12: -0.2456 S13: -0.9741 REMARK 3 S21: 0.1140 S22: 0.0191 S23: -0.2444 REMARK 3 S31: 0.5522 S32: 0.4070 S33: 0.1740 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 97:104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.2097 -4.9336 18.5330 REMARK 3 T TENSOR REMARK 3 T11: 0.1474 T22: 0.1744 REMARK 3 T33: 0.1308 T12: -0.0001 REMARK 3 T13: 0.0164 T23: -0.0383 REMARK 3 L TENSOR REMARK 3 L11: 9.2396 L22: 8.9164 REMARK 3 L33: 5.7937 L12: -1.8524 REMARK 3 L13: 2.9135 L23: -6.4664 REMARK 3 S TENSOR REMARK 3 S11: 0.0085 S12: -0.3550 S13: -0.4804 REMARK 3 S21: -0.0739 S22: 0.3376 S23: 0.4517 REMARK 3 S31: 0.0990 S32: -0.7415 S33: -0.3908 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN A AND RESID 105:122 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.9666 0.5876 23.9570 REMARK 3 T TENSOR REMARK 3 T11: 0.1118 T22: 0.0911 REMARK 3 T33: 0.1239 T12: 0.0090 REMARK 3 T13: 0.0339 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 5.6985 L22: 1.1608 REMARK 3 L33: 7.7679 L12: -0.7190 REMARK 3 L13: 5.2687 L23: -0.3415 REMARK 3 S TENSOR REMARK 3 S11: -0.0229 S12: -0.1928 S13: 0.0622 REMARK 3 S21: 0.0110 S22: -0.0685 S23: 0.0477 REMARK 3 S31: -0.0677 S32: -0.2901 S33: 0.0927 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN A AND RESID 123:133 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.7499 -1.0185 25.3954 REMARK 3 T TENSOR REMARK 3 T11: 0.1062 T22: 0.1160 REMARK 3 T33: 0.1227 T12: -0.0071 REMARK 3 T13: 0.0276 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 5.2926 L22: 1.9684 REMARK 3 L33: 5.3061 L12: -1.0792 REMARK 3 L13: 4.5855 L23: 0.3611 REMARK 3 S TENSOR REMARK 3 S11: 0.0726 S12: -0.0845 S13: 0.0910 REMARK 3 S21: -0.0010 S22: -0.0542 S23: -0.0525 REMARK 3 S31: 0.1251 S32: -0.0434 S33: -0.0220 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: ( CHAIN A AND RESID 134:142 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.7201 9.4207 16.7141 REMARK 3 T TENSOR REMARK 3 T11: 0.2668 T22: 0.1297 REMARK 3 T33: 0.1863 T12: -0.0140 REMARK 3 T13: 0.0561 T23: 0.0326 REMARK 3 L TENSOR REMARK 3 L11: 6.8850 L22: 7.1212 REMARK 3 L33: 6.6898 L12: -6.2673 REMARK 3 L13: -0.4401 L23: 2.5940 REMARK 3 S TENSOR REMARK 3 S11: 0.2705 S12: 0.0722 S13: 0.3587 REMARK 3 S21: -0.2508 S22: -0.0845 S23: -0.3224 REMARK 3 S31: -0.6953 S32: 0.1098 S33: -0.1756 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: ( CHAIN A AND RESID 143:155 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.5457 7.7339 16.1097 REMARK 3 T TENSOR REMARK 3 T11: 0.2713 T22: 0.2876 REMARK 3 T33: 0.2034 T12: 0.1528 REMARK 3 T13: 0.0183 T23: -0.0555 REMARK 3 L TENSOR REMARK 3 L11: 7.1944 L22: 2.2974 REMARK 3 L33: 6.4105 L12: -1.3725 REMARK 3 L13: 2.3875 L23: -0.0002 REMARK 3 S TENSOR REMARK 3 S11: -0.0008 S12: 0.0754 S13: 0.3510 REMARK 3 S21: -0.3421 S22: -0.3165 S23: 0.5368 REMARK 3 S31: -0.5357 S32: -0.7990 S33: 0.2390 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: ( CHAIN A AND RESID 156:169 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.2400 5.6980 24.8432 REMARK 3 T TENSOR REMARK 3 T11: 0.1994 T22: 0.2420 REMARK 3 T33: 0.1792 T12: 0.0572 REMARK 3 T13: 0.0249 T23: -0.0133 REMARK 3 L TENSOR REMARK 3 L11: 5.5533 L22: 3.4206 REMARK 3 L33: 4.5386 L12: 3.3144 REMARK 3 L13: 4.9562 L23: 3.3984 REMARK 3 S TENSOR REMARK 3 S11: 0.2170 S12: -0.2029 S13: 0.0974 REMARK 3 S21: 0.0659 S22: -0.2844 S23: 0.1287 REMARK 3 S31: -0.1794 S32: -0.5074 S33: 0.1024 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: ( CHAIN A AND RESID 170:177 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.2409 8.3153 30.3453 REMARK 3 T TENSOR REMARK 3 T11: 0.1964 T22: 0.1397 REMARK 3 T33: 0.1603 T12: -0.0112 REMARK 3 T13: 0.0137 T23: 0.0222 REMARK 3 L TENSOR REMARK 3 L11: 4.2784 L22: 8.7542 REMARK 3 L33: 4.7876 L12: -4.7047 REMARK 3 L13: -1.1760 L23: 5.0868 REMARK 3 S TENSOR REMARK 3 S11: 0.2446 S12: -0.1535 S13: 0.3642 REMARK 3 S21: -0.2208 S22: 0.0656 S23: -0.3303 REMARK 3 S31: -0.5008 S32: 0.2137 S33: -0.2063 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: ( CHAIN A AND RESID 178:186 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.2705 -0.8680 12.2619 REMARK 3 T TENSOR REMARK 3 T11: 0.2223 T22: 0.3212 REMARK 3 T33: 0.1706 T12: 0.0601 REMARK 3 T13: 0.0662 T23: 0.0316 REMARK 3 L TENSOR REMARK 3 L11: 2.3549 L22: 5.3790 REMARK 3 L33: 7.8882 L12: 0.0462 REMARK 3 L13: 0.8319 L23: 5.3149 REMARK 3 S TENSOR REMARK 3 S11: 0.1985 S12: 0.6162 S13: -0.0679 REMARK 3 S21: -0.5118 S22: -0.1494 S23: -0.3366 REMARK 3 S31: -0.0945 S32: 0.4371 S33: -0.1639 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: ( CHAIN A AND RESID 187:194 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.6044 -9.3271 12.8269 REMARK 3 T TENSOR REMARK 3 T11: 0.2491 T22: 0.2130 REMARK 3 T33: 0.1876 T12: 0.0718 REMARK 3 T13: 0.0032 T23: -0.0451 REMARK 3 L TENSOR REMARK 3 L11: 8.9671 L22: 4.1535 REMARK 3 L33: 3.3186 L12: 3.1399 REMARK 3 L13: -3.7439 L23: 0.7580 REMARK 3 S TENSOR REMARK 3 S11: 0.2098 S12: 0.1912 S13: -0.5352 REMARK 3 S21: -0.1340 S22: -0.1534 S23: 0.2831 REMARK 3 S31: 0.3110 S32: 0.2205 S33: 0.1468 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: ( CHAIN B AND RESID 1:4 ) OR ( CHAIN B AND RESID 5:6 REMARK 3 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.6372 0.8898 5.0501 REMARK 3 T TENSOR REMARK 3 T11: 0.2842 T22: 0.2455 REMARK 3 T33: 0.1705 T12: 0.0730 REMARK 3 T13: 0.0520 T23: 0.0131 REMARK 3 L TENSOR REMARK 3 L11: 5.4924 L22: 2.1670 REMARK 3 L33: 1.4893 L12: 2.1658 REMARK 3 L13: 2.2870 L23: 0.2607 REMARK 3 S TENSOR REMARK 3 S11: -0.1284 S12: 0.4634 S13: 0.1801 REMARK 3 S21: -0.4351 S22: -0.0361 S23: -0.1679 REMARK 3 S31: 0.0024 S32: 0.1525 S33: 0.2019 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: ( CHAIN C AND RESID 1:6 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.4190 3.7864 3.1686 REMARK 3 T TENSOR REMARK 3 T11: 0.3620 T22: 0.2164 REMARK 3 T33: 0.1455 T12: 0.0667 REMARK 3 T13: -0.0180 T23: 0.0211 REMARK 3 L TENSOR REMARK 3 L11: 2.1586 L22: 5.6985 REMARK 3 L33: 3.3248 L12: -1.2748 REMARK 3 L13: -1.8935 L23: 3.0104 REMARK 3 S TENSOR REMARK 3 S11: 0.0078 S12: 0.3327 S13: -0.1026 REMARK 3 S21: -0.8521 S22: -0.2958 S23: 0.0243 REMARK 3 S31: -0.5126 S32: -0.1233 S33: 0.3749 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: STRUCTURES REFINED IN PHENIX AND REMARK 3 NUCLEIC ACID AND PROTEIN RESIDUES BUILT IN COOT REMARK 4 REMARK 4 6DPB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1000235003. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.31 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41029 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.320 REMARK 200 RESOLUTION RANGE LOW (A) : 33.890 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 200 DATA REDUNDANCY : 1.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.32 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.35 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.4 REMARK 200 DATA REDUNDANCY IN SHELL : 1.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1ZBL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14% PEG3350, 20% GLYCEROL, 200 MM KI, REMARK 280 AND 25 MM CACL2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 40.77300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 18.65900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 40.77300 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 18.65900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, b, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 THE RNA CHAIN B WAS SPLIT INTO 2 CHAINS (B AND B) REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 A B 1 O2' REMARK 470 G b 6 O2' REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 373 O HOH A 460 2.06 REMARK 500 OH TYR A 174 O HOH A 301 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 66 O3 GOL A 214 2656 1.26 REMARK 500 OE2 GLU A 62 O HOH A 449 3545 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 C b 5 P C b 5 OP3 -0.142 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 C b 5 O5' - P - OP1 ANGL. DEV. = -9.4 DEGREES REMARK 500 DG C 2 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 476 DISTANCE = 6.22 ANGSTROMS REMARK 525 HOH A 477 DISTANCE = 6.42 ANGSTROMS REMARK 525 HOH A 478 DISTANCE = 6.52 ANGSTROMS REMARK 525 HOH A 479 DISTANCE = 6.58 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 201 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 71 OD2 REMARK 620 2 ASP A 192 OD1 107.5 REMARK 620 3 HOH A 327 O 87.2 85.6 REMARK 620 4 HOH A 351 O 88.4 86.8 169.6 REMARK 620 5 C b 5 OP3 159.8 92.5 96.4 91.0 REMARK 620 6 C b 5 OP1 100.0 152.4 97.8 92.2 59.9 REMARK 620 7 C b 5 OP1 97.3 154.4 101.9 88.0 62.6 5.0 REMARK 620 8 HOH b 201 O 161.0 90.6 88.7 98.4 7.8 62.2 65.5 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 202 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 71 OD1 REMARK 620 2 GLU A 109 OE1 99.2 REMARK 620 3 ASP A 132 OD1 133.3 94.2 REMARK 620 4 ASP A 132 OD2 102.2 149.6 55.4 REMARK 620 5 U B 4 O3' 147.9 84.3 77.6 88.8 REMARK 620 6 C b 5 OP1 91.9 107.3 126.2 93.4 57.1 REMARK 620 7 C b 5 OP1 91.3 111.7 124.5 89.3 58.4 4.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 203 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 163 OD1 REMARK 620 2 GLU A 166 OE1 103.2 REMARK 620 3 HOH A 302 O 170.5 79.5 REMARK 620 4 HOH A 342 O 101.2 154.4 75.2 REMARK 620 5 HOH A 426 O 85.2 96.4 85.5 78.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 216 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 188 OE2 REMARK 620 2 HOH A 358 O 61.1 REMARK 620 3 HOH B 109 O 107.7 123.3 REMARK 620 4 C b 5 OP2 97.1 130.7 104.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 204 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 192 OD1 REMARK 620 2 HOH A 370 O 82.0 REMARK 620 3 G b 6 OP2 99.8 166.5 REMARK 620 4 HOH b 201 O 61.1 108.1 62.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN b 101 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G b 6 O6 REMARK 620 2 HOH b 202 O 90.7 REMARK 620 3 HOH C 207 O 96.1 173.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K C 101 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DT C 4 O4 REMARK 620 2 DG C 5 O6 75.2 REMARK 620 3 HOH C 210 O 86.7 82.0 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 209 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 210 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 211 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 212 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 213 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 214 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 215 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 216 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN b 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K C 101 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE RNA CHAIN B WAS SPLIT INTO 2 CHAINS (B AND B) AT THE POSITION 4- REMARK 999 5, WHERE THE CLEAVAGE OCCURS DBREF 6DPB A 61 196 UNP Q9KEI9 RNH1_BACHD 61 196 DBREF 6DPB B 1 4 PDB 6DPB 6DPB 1 4 DBREF 6DPB b 5 6 PDB 6DPB 6DPB 5 6 DBREF 6DPB C 1 6 PDB 6DPB 6DPB 1 6 SEQRES 1 A 136 GLU GLU ILE ILE TRP GLU SER LEU SER VAL ASP VAL GLY SEQRES 2 A 136 SER GLN GLY ASN PRO GLY ILE VAL GLU TYR LYS GLY VAL SEQRES 3 A 136 ASP THR LYS THR GLY GLU VAL LEU PHE GLU ARG GLU PRO SEQRES 4 A 136 ILE PRO ILE GLY THR ASN ASN MET GLY GLU PHE LEU ALA SEQRES 5 A 136 ILE VAL HIS GLY LEU ARG TYR LEU LYS GLU ARG ASN SER SEQRES 6 A 136 ARG LYS PRO ILE TYR SER ASP SER GLN THR ALA ILE LYS SEQRES 7 A 136 TRP VAL LYS ASP LYS LYS ALA LYS SER THR LEU VAL ARG SEQRES 8 A 136 ASN GLU GLU THR ALA LEU ILE TRP LYS LEU VAL ASP GLU SEQRES 9 A 136 ALA GLU GLU TRP LEU ASN THR HIS THR TYR GLU THR PRO SEQRES 10 A 136 ILE LEU LYS TRP GLN THR ASP LYS TRP GLY GLU ILE LYS SEQRES 11 A 136 ALA ASP TYR GLY ARG LYS SEQRES 1 B 4 A C A U SEQRES 1 b 2 C G SEQRES 1 C 6 DC DG DA DT DG DT HET MN A 201 1 HET MN A 202 1 HET MN A 203 1 HET K A 204 1 HET IOD A 205 1 HET IOD A 206 1 HET IOD A 207 1 HET IOD A 208 1 HET GOL A 209 6 HET GOL A 210 6 HET GOL A 211 6 HET EDO A 212 4 HET EDO A 213 4 HET GOL A 214 6 HET EDO A 215 4 HET K A 216 1 HET MN b 101 1 HET K C 101 1 HETNAM MN MANGANESE (II) ION HETNAM K POTASSIUM ION HETNAM IOD IODIDE ION HETNAM GOL GLYCEROL HETNAM EDO 1,2-ETHANEDIOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 5 MN 4(MN 2+) FORMUL 8 K 3(K 1+) FORMUL 9 IOD 4(I 1-) FORMUL 13 GOL 4(C3 H8 O3) FORMUL 16 EDO 3(C2 H6 O2) FORMUL 23 HOH *212(H2 O) HELIX 1 AA1 THR A 104 ARG A 123 1 20 HELIX 2 AA2 SER A 133 LYS A 143 1 11 HELIX 3 AA3 ASN A 152 GLU A 154 5 3 HELIX 4 AA4 THR A 155 ASN A 170 1 16 HELIX 5 AA5 GLN A 182 GLY A 187 1 6 SHEET 1 AA1 5 VAL A 93 GLY A 103 0 SHEET 2 AA1 5 GLY A 79 ASP A 87 -1 N VAL A 81 O ILE A 100 SHEET 3 AA1 5 LEU A 68 GLN A 75 -1 N SER A 69 O VAL A 86 SHEET 4 AA1 5 ILE A 129 SER A 131 1 O TYR A 130 N LEU A 68 SHEET 5 AA1 5 ILE A 178 LYS A 180 1 O LEU A 179 N ILE A 129 LINK O3'C U B 4 P C C b 5 1555 1555 1.59 LINK OD2 ASP A 71 MN MN A 201 1555 1555 2.11 LINK OD1 ASP A 71 MN MN A 202 1555 1555 2.06 LINK OE1 GLU A 109 MN MN A 202 1555 1555 2.07 LINK OD1 ASP A 132 MN MN A 202 1555 1555 2.07 LINK OD2 ASP A 132 MN MN A 202 1555 1555 2.53 LINK OD1 ASP A 163 MN MN A 203 1555 1555 2.61 LINK OE1 GLU A 166 MN MN A 203 1555 1555 2.12 LINK OE2 GLU A 188 K B K A 216 1555 1555 3.45 LINK OD1 ASP A 192 MN MN A 201 1555 1555 2.10 LINK OD1 ASP A 192 K C K A 204 1555 1555 2.91 LINK MN MN A 201 O HOH A 327 1555 1555 2.18 LINK MN MN A 201 O HOH A 351 1555 1555 2.18 LINK MN MN A 201 OP3B C b 5 1555 1555 2.15 LINK MN MN A 201 OP1B C b 5 1555 1555 2.38 LINK MN MN A 201 OP1C C b 5 1555 1555 2.31 LINK MN MN A 201 O CHOH b 201 1555 1555 2.13 LINK MN MN A 202 O3'C U B 4 1555 1555 2.65 LINK MN MN A 202 OP1B C b 5 1555 1555 2.39 LINK MN MN A 202 OP1C C b 5 1555 1555 2.26 LINK MN MN A 203 O HOH A 302 1555 1555 2.36 LINK MN MN A 203 O HOH A 342 1555 4556 2.12 LINK MN MN A 203 O HOH A 426 1555 1555 2.30 LINK K C K A 204 O HOH A 370 1555 1555 2.80 LINK K C K A 204 OP2 G b 6 1555 1555 2.79 LINK K C K A 204 O CHOH b 201 1555 1555 3.01 LINK K B K A 216 O HOH A 358 1555 1555 3.23 LINK K B K A 216 O HOH B 109 1555 1555 2.67 LINK K B K A 216 OP2B C b 5 1555 1555 2.66 LINK O6 G b 6 MN MN b 101 1555 1555 2.68 LINK MN MN b 101 O HOH b 202 1555 1555 2.37 LINK MN MN b 101 O HOH C 207 1555 4545 1.99 LINK O4 DT C 4 K A K C 101 1555 1555 3.11 LINK O6 DG C 5 K A K C 101 1555 1555 2.65 LINK K A K C 101 O HOH C 210 1555 1555 3.06 CISPEP 1 ASN A 77 PRO A 78 0 2.05 SITE 1 AC1 6 ASP A 71 ASP A 192 HOH A 327 HOH A 351 SITE 2 AC1 6 C b 5 HOH b 201 SITE 1 AC2 5 ASP A 71 GLU A 109 ASP A 132 U B 4 SITE 2 AC2 5 C b 5 SITE 1 AC3 7 LYS A 144 ASP A 163 GLU A 166 HOH A 302 SITE 2 AC3 7 HOH A 323 HOH A 342 HOH A 426 SITE 1 AC4 8 ASP A 192 ARG A 195 LYS A 196 HOH A 366 SITE 2 AC4 8 HOH A 370 C b 5 G b 6 HOH b 201 SITE 1 AC5 1 TYR A 83 SITE 1 AC6 2 HOH A 474 HOH A 476 SITE 1 AC7 6 GLY A 76 ASN A 77 PRO A 78 DG C 2 SITE 2 AC7 6 DA C 3 HOH b 204 SITE 1 AC8 8 HIS A 115 ARG A 118 TYR A 119 ARG A 123 SITE 2 AC8 8 GLU A 167 ASN A 170 GOL A 211 HOH A 311 SITE 1 AC9 6 HIS A 115 ARG A 118 ASN A 170 GOL A 210 SITE 2 AC9 6 HOH A 305 HOH A 398 SITE 1 AD1 3 LYS A 143 THR A 173 TYR A 174 SITE 1 AD2 4 LYS A 89 GLU A 153 ALA A 156 HOH A 354 SITE 1 AD3 5 GLU A 66 ARG A 123 SER A 125 LYS A 127 SITE 2 AD3 5 HOH A 329 SITE 1 AD4 4 THR A 148 HOH A 320 DT C 4 DG C 5 SITE 1 AD5 6 ASP A 132 GLU A 188 HOH A 310 U B 4 SITE 2 AD5 6 HOH B 109 C b 5 SITE 1 AD6 4 HOH C 207 G b 6 HOH b 202 HOH b 205 SITE 1 AD7 4 DT C 4 DG C 5 HOH C 205 HOH C 210 CRYST1 81.546 37.318 62.154 90.00 96.85 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012263 0.000000 0.001473 0.00000 SCALE2 0.000000 0.026797 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016205 0.00000